Guide to the Human Genome
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Name: CFI Sequence: fasta or formatted (583aa) NCBI GI: 119392081
Description:

complement factor I preproprotein

Referenced in:

Complement

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         30           2
 C cysteine            7.2         42           2
 D aspartate           6.2         36           2
 E glutamate           5.3         31           2
 F phenylalanine       4.3         25           2
 G glycine             7.9         46           2
 H histidine           2.4         14           1
 I isoleucine          5.3         31           2
 K lysine              7.4         43           2
 L leucine             6.5         38           2
 M methionine          1.9         11           1
 N asparagine          4.1         24           2
 P proline             3.3         19           1
 Q glutamine           4.5         26           2
 R arginine            4.6         27           3
 S serine              6.0         35           2
 T threonine           5.5         32           2
 V valine              6.7         39           2
 W tryptophan          2.1         12           1
 Y tyrosine            3.8         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   complement factor I preproprotein 
TMPRSS7               0.130   transmembrane protease, serine 7 
ST14                  0.125   matriptase 
TMPRSS6               0.119   transmembrane protease, serine 6 
TMPRSS11D             0.119   transmembrane protease, serine 11D 
CORIN                 0.109   corin 
TMPRSS9               0.107   transmembrane protease, serine 9 
PRSS12                0.104   neurotrypsin precursor 
KLKB1                 0.101   plasma kallikrein B1 precursor 
TMPRSS2               0.101   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.101   transmembrane protease, serine 2 isoform 2 
F11                   0.098   coagulation factor XI precursor 
HPN                   0.096   hepsin 
HPN                   0.096   hepsin 
TMPRSS5               0.095   transmembrane protease, serine 5 
TMPRSS11B             0.095   transmembrane protease, serine 11B 
TMPRSS11F             0.094   transmembrane protease, serine 11F 
UNQ9391               0.094   hypothetical protein LOC203074 
TMPRSS11E             0.094   transmembrane protease, serine 11E 
TMPRSS11E2            0.094   transmembrane protease, serine 11E2 
TMPRSS12              0.093   transmembrane protease, serine 12 
PLAT                  0.092   plasminogen activator, tissue isoform 1 preproprotein...
PLAT                  0.092   plasminogen activator, tissue isoform 3 preproprotei...
PRSS7                 0.092   enterokinase precursor 
PROC                  0.091   protein C 
ACR                   0.091   acrosin precursor 
TMPRSS11A             0.091   transmembrane protease, serine 11A isoform 2 
TMPRSS11A             0.091   transmembrane protease, serine 11A isoform 1 
TMPRSS13              0.090   transmembrane protease, serine 13 
TMPRSS3               0.089   transmembrane protease, serine 3 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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