Guide to the Human Genome
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Name: C2 Sequence: fasta or formatted (620aa) NCBI GI: 225543438
Description:

complement component 2 isoform 2 preproprotein

Referenced in:

Complement

Other entries for this name:
alt prot [752aa] complement component 2 isoform 1 preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         35           2
 C cysteine            2.6         16           1
 D aspartate           5.5         34           2
 E glutamate           5.6         35           1
 F phenylalanine       4.5         28           2
 G glycine             7.3         45           2
 H histidine           2.9         18           1
 I isoleucine          4.7         29           2
 K lysine              5.3         33           2
 L leucine            10.3         64           3
 M methionine          3.1         19           2
 N asparagine          6.0         37           2
 P proline             4.5         28           3
 Q glutamine           4.0         25           1
 R arginine            5.5         34           2
 S serine              7.7         48           2
 T threonine           4.8         30           1
 V valine              6.5         40           2
 W tryptophan          1.6         10           1
 Y tyrosine            1.9         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   complement component 2 isoform 2 preproprotein [Hom... 
C2                    0.974   complement component 2 isoform 1 preproprotein [Homo...
CFB                   0.303   complement factor B preproprotein 
TMPRSS4               0.047   transmembrane protease, serine 4 isoform 3 
TMPRSS4               0.047   transmembrane protease, serine 4 isoform 1 
TESSP1                0.046   testis-specific serine protease 1 
OVCH2                 0.046   ovochymase 2 
TMPRSS6               0.043   transmembrane protease, serine 6 
PRSS27                0.041   marapsin 
TESSP2                0.041   testis serine protease 2 
PROC                  0.040   protein C 
TPSAB1                0.040   tryptase alpha/beta 1 precursor 
TMPRSS12              0.040   transmembrane protease, serine 12 
C1S                   0.039   complement component 1, s subcomponent precursor [Hom...
C1S                   0.039   complement component 1, s subcomponent precursor [Ho...
TPSB2                 0.039   tryptase beta 2 precursor 
PRSS8                 0.039   prostasin preproprotein 
LOC100293486          0.039   PREDICTED: similar to hCG2041452 
LOC100291379          0.039   PREDICTED: hypothetical protein XP_002346556 
LOC100288960          0.039   PREDICTED: hypothetical protein XP_002342392 
ESSPL                 0.039   epidermis-specific serine protease-like protein [Ho...
TMPRSS11B             0.039   transmembrane protease, serine 11B 
F11                   0.038   coagulation factor XI precursor 
MASP2                 0.037   mannan-binding lectin serine protease 2 isoform 1 pr...
PRSS33                0.037   protease, serine, 33 
TMPRSS9               0.036   transmembrane protease, serine 9 
MPN2                  0.036   marapsin 2 
HPN                   0.036   hepsin 
HPN                   0.036   hepsin 
TSP50                 0.036   testes-specific protease 50 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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