Guide to the Human Genome
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Name: RICTOR Sequence: fasta or formatted (1708aa) NCBI GI: 59891448
Description:

rapamycin-insensitive companion of mTOR

Referenced in:

mTOR Pathway
Peptidylprolyl Isomerases
Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         90           2
 C cysteine            2.2         37           1
 D aspartate           5.7         98           2
 E glutamate           5.9        100           2
 F phenylalanine       3.4         58           2
 G glycine             4.6         79           2
 H histidine           3.5         60           2
 I isoleucine          6.1        104           3
 K lysine              5.6         96           2
 L leucine            13.1        224           5
 M methionine          1.6         28           1
 N asparagine          5.1         87           2
 P proline             4.0         68           2
 Q glutamine           3.9         67           3
 R arginine            5.9        100           2
 S serine             10.0        171           3
 T threonine           5.9        100           3
 V valine              5.2         88           2
 W tryptophan          0.8         14           1
 Y tyrosine            2.3         39           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   rapamycin-insensitive companion of mTOR 
MUC21                 0.007   mucin 21 
MUC16                 0.006   mucin 16 
LOC100294236          0.006   PREDICTED: similar to diffuse panbronchiolitis crit...
MUC12                 0.005   PREDICTED: mucin 12 
MUC12                 0.005   PREDICTED: mucin 12, cell surface associated 
MUC17                 0.005   mucin 17 
MUC6                  0.005   mucin 6, gastric 
MUC3A                 0.005   PREDICTED: mucin 3A, cell surface associated, parti...
MUC3A                 0.005   PREDICTED: mucin 3A, intestinal 
DSPP                  0.004   dentin sialophosphoprotein preproprotein 
LOC100130716          0.004   PREDICTED: similar to mucin 11 
LOC100130716          0.004   PREDICTED: similar to Mucin-12 
LOC100133408          0.004   PREDICTED: similar to mucin 
LOC729792             0.004   PREDICTED: hypothetical protein 
LOC729792             0.004   PREDICTED: hypothetical protein 
LOC729792             0.004   PREDICTED: hypothetical protein 
LOC100294501          0.004   PREDICTED: hypothetical protein 
LOC100294249          0.004   PREDICTED: hypothetical protein XP_002344067 
LOC100294238          0.004   PREDICTED: hypothetical protein 
LOC100294204          0.004   PREDICTED: hypothetical protein 
LOC100294136          0.004   PREDICTED: hypothetical protein 
LOC100294091          0.004   PREDICTED: hypothetical protein 
LOC730401             0.004   PREDICTED: hypothetical protein 
MUC12                 0.004   PREDICTED: mucin 12 
LOC100131251          0.004   PREDICTED: hypothetical protein 
LOC100131251          0.004   PREDICTED: hypothetical protein 
AFF4                  0.004   ALL1 fused gene from 5q31 
MUC12                 0.004   PREDICTED: mucin 12 
PTPRC                 0.003   protein tyrosine phosphatase, receptor type, C isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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