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Search of human proteins with 58533176
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens]
(638 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens] 1312 0.0
gi|58533172 zinc finger, matrin type 1 isoform 3 [Homo sapiens] 959 0.0
gi|7706156 lysine-rich coiled-coil 1 [Homo sapiens] 337 3e-92
gi|209180455 zinc finger, matrin type 4 isoform b [Homo sapiens] 130 3e-30
gi|13375887 zinc finger, matrin type 4 isoform a [Homo sapiens] 106 6e-23
gi|6912440 zinc finger protein 346 [Homo sapiens] 100 4e-21
gi|219881538 hypothetical protein LOC199870 isoform 2 [Homo sapi... 66 9e-11
gi|219881536 hypothetical protein LOC199870 isoform 1 [Homo sapi... 66 9e-11
gi|111118986 alpha-1A-adrenergic receptor isoform 2 [Homo sapiens] 63 7e-10
gi|168229156 NFKB activating protein [Homo sapiens] 62 1e-09
gi|11968019 p53 target zinc finger protein isoform 1 [Homo sapiens] 60 5e-09
gi|23199978 p53 target zinc finger protein isoform 2 [Homo sapiens] 60 5e-09
gi|170932471 hypothetical protein LOC79703 [Homo sapiens] 58 2e-08
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 57 4e-08
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 57 5e-08
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo... 55 2e-07
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo... 55 2e-07
gi|58294160 breast carcinoma amplified sequence 4 isoform a [Hom... 55 3e-07
gi|6005810 mitogen-activated protein kinase kinase kinase kinase... 55 3e-07
gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 55 3e-07
gi|61969666 arginine-fifty homeobox [Homo sapiens] 54 3e-07
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 54 4e-07
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 54 4e-07
gi|78000165 sorbin and SH3 domain containing 1 isoform 4 [Homo s... 53 8e-07
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 52 1e-06
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 52 1e-06
gi|118442834 RPGRIP1-like isoform a [Homo sapiens] 52 2e-06
gi|222446642 solute carrier family 36, member 3 isoform 1 [Homo ... 52 2e-06
gi|27734775 hypothetical protein LOC286499 [Homo sapiens] 52 2e-06
gi|28372523 intraflagellar transport protein IFT20 [Homo sapiens] 51 3e-06
>gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens]
Length = 638
Score = 1312 bits (3396), Expect = 0.0
Identities = 638/638 (100%), Positives = 638/638 (100%)
Query: 1 MESCSVTRLECSGAISAHCSLHLPGSSDSPASASQIAGTTDAIWNEQEKAELFTDKFCQV 60
MESCSVTRLECSGAISAHCSLHLPGSSDSPASASQIAGTTDAIWNEQEKAELFTDKFCQV
Sbjct: 1 MESCSVTRLECSGAISAHCSLHLPGSSDSPASASQIAGTTDAIWNEQEKAELFTDKFCQV 60
Query: 61 CGVMLQFESQRISHYEGEKHAQNVSFYFQMHGEQNEVPGKKMKMHVENFQVHRYEGVDKN 120
CGVMLQFESQRISHYEGEKHAQNVSFYFQMHGEQNEVPGKKMKMHVENFQVHRYEGVDKN
Sbjct: 61 CGVMLQFESQRISHYEGEKHAQNVSFYFQMHGEQNEVPGKKMKMHVENFQVHRYEGVDKN 120
Query: 121 KFCDLCNMMFSSPLIAQSHYVGKVHAKKLKQLMEEHDQASPSGFQPEMAFSMRTYVCHIC 180
KFCDLCNMMFSSPLIAQSHYVGKVHAKKLKQLMEEHDQASPSGFQPEMAFSMRTYVCHIC
Sbjct: 121 KFCDLCNMMFSSPLIAQSHYVGKVHAKKLKQLMEEHDQASPSGFQPEMAFSMRTYVCHIC 180
Query: 181 SIAFTSLDMFRSHMQGSEHQIKESIVINLVKNSRKTQDSYQNECADYINVQKARGLEAKT 240
SIAFTSLDMFRSHMQGSEHQIKESIVINLVKNSRKTQDSYQNECADYINVQKARGLEAKT
Sbjct: 181 SIAFTSLDMFRSHMQGSEHQIKESIVINLVKNSRKTQDSYQNECADYINVQKARGLEAKT 240
Query: 241 CFRKMEESSLETRRYREVVDSRPRHRMFEQRLPFETFRTYAAPYNISQAMEKQLPHSKKT 300
CFRKMEESSLETRRYREVVDSRPRHRMFEQRLPFETFRTYAAPYNISQAMEKQLPHSKKT
Sbjct: 241 CFRKMEESSLETRRYREVVDSRPRHRMFEQRLPFETFRTYAAPYNISQAMEKQLPHSKKT 300
Query: 301 YDSFQDELEDYIKVQKARGLDPKTCFRKMRENSVDTHGYREMVDSGPRSRMCEQRFSHEA 360
YDSFQDELEDYIKVQKARGLDPKTCFRKMRENSVDTHGYREMVDSGPRSRMCEQRFSHEA
Sbjct: 301 YDSFQDELEDYIKVQKARGLDPKTCFRKMRENSVDTHGYREMVDSGPRSRMCEQRFSHEA 360
Query: 361 SQTYQRPYHISPVESQLPQWLPTHSKRTYDSFQDELEDYIKVQKARGLEPKTCFRKIGDS 420
SQTYQRPYHISPVESQLPQWLPTHSKRTYDSFQDELEDYIKVQKARGLEPKTCFRKIGDS
Sbjct: 361 SQTYQRPYHISPVESQLPQWLPTHSKRTYDSFQDELEDYIKVQKARGLEPKTCFRKIGDS 420
Query: 421 SVETHRNREMVDVRPRHRMLEQKLPCETFQTYSGPYSISQVVENQLPHCLPAHDSKQRLD 480
SVETHRNREMVDVRPRHRMLEQKLPCETFQTYSGPYSISQVVENQLPHCLPAHDSKQRLD
Sbjct: 421 SVETHRNREMVDVRPRHRMLEQKLPCETFQTYSGPYSISQVVENQLPHCLPAHDSKQRLD 480
Query: 481 SISYCQLTRDCFPEKPVPLSLNQQENNSGSYSVESEVYKHLSSENNTADHQAGHKQKHQK 540
SISYCQLTRDCFPEKPVPLSLNQQENNSGSYSVESEVYKHLSSENNTADHQAGHKQKHQK
Sbjct: 481 SISYCQLTRDCFPEKPVPLSLNQQENNSGSYSVESEVYKHLSSENNTADHQAGHKQKHQK 540
Query: 541 RKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSGKLKHRKKKK 600
RKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSGKLKHRKKKK
Sbjct: 541 RKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSGKLKHRKKKK 600
Query: 601 SHDVPSEKEERKHRKEKKKSVEERTEEEMLWDESILGF 638
SHDVPSEKEERKHRKEKKKSVEERTEEEMLWDESILGF
Sbjct: 601 SHDVPSEKEERKHRKEKKKSVEERTEEEMLWDESILGF 638
>gi|58533172 zinc finger, matrin type 1 isoform 3 [Homo sapiens]
Length = 467
Score = 959 bits (2480), Expect = 0.0
Identities = 467/467 (100%), Positives = 467/467 (100%)
Query: 172 MRTYVCHICSIAFTSLDMFRSHMQGSEHQIKESIVINLVKNSRKTQDSYQNECADYINVQ 231
MRTYVCHICSIAFTSLDMFRSHMQGSEHQIKESIVINLVKNSRKTQDSYQNECADYINVQ
Sbjct: 1 MRTYVCHICSIAFTSLDMFRSHMQGSEHQIKESIVINLVKNSRKTQDSYQNECADYINVQ 60
Query: 232 KARGLEAKTCFRKMEESSLETRRYREVVDSRPRHRMFEQRLPFETFRTYAAPYNISQAME 291
KARGLEAKTCFRKMEESSLETRRYREVVDSRPRHRMFEQRLPFETFRTYAAPYNISQAME
Sbjct: 61 KARGLEAKTCFRKMEESSLETRRYREVVDSRPRHRMFEQRLPFETFRTYAAPYNISQAME 120
Query: 292 KQLPHSKKTYDSFQDELEDYIKVQKARGLDPKTCFRKMRENSVDTHGYREMVDSGPRSRM 351
KQLPHSKKTYDSFQDELEDYIKVQKARGLDPKTCFRKMRENSVDTHGYREMVDSGPRSRM
Sbjct: 121 KQLPHSKKTYDSFQDELEDYIKVQKARGLDPKTCFRKMRENSVDTHGYREMVDSGPRSRM 180
Query: 352 CEQRFSHEASQTYQRPYHISPVESQLPQWLPTHSKRTYDSFQDELEDYIKVQKARGLEPK 411
CEQRFSHEASQTYQRPYHISPVESQLPQWLPTHSKRTYDSFQDELEDYIKVQKARGLEPK
Sbjct: 181 CEQRFSHEASQTYQRPYHISPVESQLPQWLPTHSKRTYDSFQDELEDYIKVQKARGLEPK 240
Query: 412 TCFRKIGDSSVETHRNREMVDVRPRHRMLEQKLPCETFQTYSGPYSISQVVENQLPHCLP 471
TCFRKIGDSSVETHRNREMVDVRPRHRMLEQKLPCETFQTYSGPYSISQVVENQLPHCLP
Sbjct: 241 TCFRKIGDSSVETHRNREMVDVRPRHRMLEQKLPCETFQTYSGPYSISQVVENQLPHCLP 300
Query: 472 AHDSKQRLDSISYCQLTRDCFPEKPVPLSLNQQENNSGSYSVESEVYKHLSSENNTADHQ 531
AHDSKQRLDSISYCQLTRDCFPEKPVPLSLNQQENNSGSYSVESEVYKHLSSENNTADHQ
Sbjct: 301 AHDSKQRLDSISYCQLTRDCFPEKPVPLSLNQQENNSGSYSVESEVYKHLSSENNTADHQ 360
Query: 532 AGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSG 591
AGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSG
Sbjct: 361 AGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSG 420
Query: 592 KLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEEMLWDESILGF 638
KLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEEMLWDESILGF
Sbjct: 421 KLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEEMLWDESILGF 467
>gi|7706156 lysine-rich coiled-coil 1 [Homo sapiens]
Length = 259
Score = 337 bits (863), Expect = 3e-92
Identities = 169/257 (65%), Positives = 203/257 (78%), Gaps = 2/257 (0%)
Query: 384 HSKRTYDSFQDELEDYIKVQKARGLEPKTCFRKIGDSSVETHRNREMVDVRPRHRMLEQK 443
HSK+TYDSFQDELEDYIKVQKARGLEPKTCFRK+ +ET + V+ RP +RM +Q+
Sbjct: 3 HSKKTYDSFQDELEDYIKVQKARGLEPKTCFRKMKGDYLETCGYKGEVNSRPTYRMFDQR 62
Query: 444 LPCETFQTYSGPYSISQVVENQLPHCLPAHDSKQRLDSISYCQLTRDCFPEKPVPLSLNQ 503
LP ET QTY +I Q VEN+LP LPAHDS+ RLDS+SYCQ TRDCF EKPVPL+ NQ
Sbjct: 63 LPSETIQTYPRSCNIPQTVENRLPQWLPAHDSRLRLDSLSYCQFTRDCFSEKPVPLNFNQ 122
Query: 504 QENNSGSYSVESEVYKHLSSENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKK 563
QE GS+ VE VYKH SS+N+T+ HQA HKQ HQKRKRH EEG+E+ E+E+SKHKRKK
Sbjct: 123 QEYICGSHGVEHRVYKHFSSDNSTSTHQASHKQIHQKRKRHPEEGREKSEEERSKHKRKK 182
Query: 564 SYEDTDLDKDKSIRQRKREE--DRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSV 621
S E+ DLDK KSI+++K E + V VS+ KLK+RK+KKS DV S+KEERK K+KK+
Sbjct: 183 SCEEIDLDKHKSIQRKKTEVEIETVHVSTEKLKNRKEKKSRDVVSKKEERKRTKKKKEQG 242
Query: 622 EERTEEEMLWDESILGF 638
+ERTEEEMLWD+SILGF
Sbjct: 243 QERTEEEMLWDQSILGF 259
Score = 121 bits (304), Expect = 2e-27
Identities = 73/165 (44%), Positives = 98/165 (59%), Gaps = 23/165 (13%)
Query: 294 LPHSKKTYDSFQDELEDYIKVQKARGLDPKTCFRKMRENSVDTHGYREMVDSGPRSRMCE 353
+ HSKKTYDSFQDELEDYIKVQKARGL+PKTCFRKM+ + ++T GY+ V+S P RM +
Sbjct: 1 MKHSKKTYDSFQDELEDYIKVQKARGLEPKTCFRKMKGDYLETCGYKGEVNSRPTYRMFD 60
Query: 354 QRFSHEASQTYQRPYHI-SPVESQLPQWLPTHSKR-----------TYDSFQDE------ 395
QR E QTY R +I VE++LPQWLP H R T D F ++
Sbjct: 61 QRLPSETIQTYPRSCNIPQTVENRLPQWLPAHDSRLRLDSLSYCQFTRDCFSEKPVPLNF 120
Query: 396 -LEDYIKVQKARGLEPKTCFRKIGDSSVETHR--NREMVDVRPRH 437
++YI + G+E + D+S TH+ ++++ R RH
Sbjct: 121 NQQEYI--CGSHGVEHRVYKHFSSDNSTSTHQASHKQIHQKRKRH 163
Score = 106 bits (264), Expect = 7e-23
Identities = 53/94 (56%), Positives = 67/94 (71%)
Query: 210 VKNSRKTQDSYQNECADYINVQKARGLEAKTCFRKMEESSLETRRYREVVDSRPRHRMFE 269
+K+S+KT DS+Q+E DYI VQKARGLE KTCFRKM+ LET Y+ V+SRP +RMF+
Sbjct: 1 MKHSKKTYDSFQDELEDYIKVQKARGLEPKTCFRKMKGDYLETCGYKGEVNSRPTYRMFD 60
Query: 270 QRLPFETFRTYAAPYNISQAMEKQLPHSKKTYDS 303
QRLP ET +TY NI Q +E +LP +DS
Sbjct: 61 QRLPSETIQTYPRSCNIPQTVENRLPQWLPAHDS 94
>gi|209180455 zinc finger, matrin type 4 isoform b [Homo sapiens]
Length = 153
Score = 130 bits (328), Expect = 3e-30
Identities = 63/150 (42%), Positives = 91/150 (60%), Gaps = 11/150 (7%)
Query: 51 ELFTDKFCQVCGVMLQFESQRISHYEGEKHAQNVSFYFQMHGEQNEVPGKKMKMHVENFQ 110
+LFTD +C+VC L ESQR++HYE KHA V Y+ +H P K+++ EN
Sbjct: 9 DLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRS--ENGS 66
Query: 111 VHRYEGVDKNKFCDLCNMMFSSPLIAQSHYVGKVHAKKLKQLMEEHDQASPSGFQPEMAF 170
+ VDKNK C LCNM F+S ++A SHY GK+HAK+LK L+ E +G +
Sbjct: 67 --DADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLR----- 119
Query: 171 SMRTYVCHICSIAFTSLDMFRSHMQGSEHQ 200
R Y C ICS++ S++ + +H++GS+HQ
Sbjct: 120 --RNYRCTICSVSLNSIEQYHAHLKGSKHQ 147
>gi|13375887 zinc finger, matrin type 4 isoform a [Homo sapiens]
Length = 229
Score = 106 bits (265), Expect = 6e-23
Identities = 64/185 (34%), Positives = 92/185 (49%), Gaps = 23/185 (12%)
Query: 51 ELFTDKFCQVCGVMLQFESQRISHYEGEKHAQNVSFYFQMHGEQNEVPGKKMKMHVENFQ 110
+LFTD +C+VC L ESQR++HYE KHA V Y+ +H P K+++ EN
Sbjct: 9 DLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRS--ENGS 66
Query: 111 VHRYEGVDKNKFCDLCNMMFSSPLIAQSHYVGKVHAKKLKQLMEEHD------------- 157
+ VDKNK C LCNM F+S ++A SHY GK+HAK+LK L+ E
Sbjct: 67 --DADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTATPLSPLK 124
Query: 158 ----QASPSGFQPEMAFSMRTYVCHICSIAFTSLDMFRSHMQGSEHQIKESIVINLVKNS 213
+P P Y C +C+ F + M + H G +H+ K + + L++
Sbjct: 125 PPRMDTAPVVASPYQRRDSDRY-CGLCAAWFNNPLMAQQHYDGKKHK-KNAARVALLEQL 182
Query: 214 RKTQD 218
T D
Sbjct: 183 GTTLD 187
Score = 77.8 bits (190), Expect = 3e-14
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 16/156 (10%)
Query: 55 DKFCQVCGVMLQFESQRISHYEGEKHAQNVSFYFQMHGEQNEV--------PGKKMKMHV 106
+K C +C + SHY+G+ HA+ + GE+ + P K +M
Sbjct: 74 NKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLL---GEKTPLKTTATPLSPLKPPRMDT 130
Query: 107 ENFQVHRYEGVDKNKFCDLCNMMFSSPLIAQSHYVGKVHAKKLKQ--LMEEHDQASPSGF 164
Y+ D +++C LC F++PL+AQ HY GK H K + L+E+ G
Sbjct: 131 APVVASPYQRRDSDRYCGLCAAWFNNPLMAQQHYDGKKHKKNAARVALLEQLGTTLDMG- 189
Query: 165 QPEMAFSMRTYVCHICSIAFTSLDMFRSHMQGSEHQ 200
E+ R Y C ICS++ S++ + +H++GS+HQ
Sbjct: 190 --ELRGLRRNYRCTICSVSLNSIEQYHAHLKGSKHQ 223
>gi|6912440 zinc finger protein 346 [Homo sapiens]
Length = 294
Score = 100 bits (249), Expect = 4e-21
Identities = 65/210 (30%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 32 SASQIAGTTDAIWNEQEKAELFTDKFCQVCGVMLQFESQRISHYEGEKHAQNVSFYFQMH 91
S +Q G + Q+ LFT+ C+VC +L ESQ+++HY+ +KHA V Y +H
Sbjct: 49 SGAQPVGREEVEHMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIH 108
Query: 92 GEQNEVPGKKMKMHVENFQVHRYEGVDKNKFCDLCNMMFSSPLIAQSHYVGKVHAKKLKQ 151
G + + G+ K+ + DKN+ C +CNM FSSP++AQSHY+GK HAK LK
Sbjct: 109 GMET-LKGETKKLDSDQ---KSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLK- 163
Query: 152 LMEEHDQASPSGFQPEMAFSMRTYVCHICSIAFTSLDMFRSHMQGSEHQIKESIVINLVK 211
L ++ + EM + C +C F M + H G +H+ +E+ + + +
Sbjct: 164 LKQQSTKVEALHQNREMIDPDK--FCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMAR 221
Query: 212 NSRKTQDSYQNECADYINVQKARGLEAKTC 241
R + + A +G KTC
Sbjct: 222 YGRLADPAVTDFPA-------GKGYPCKTC 244
>gi|219881538 hypothetical protein LOC199870 isoform 2 [Homo
sapiens]
Length = 312
Score = 66.2 bits (160), Expect = 9e-11
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 6/66 (9%)
Query: 8 RLECSGAISAHCSLHLPGSSDSPASASQIAGTTDAIWNE-----QEKAELF-TDKFCQVC 61
RLEC+G ISAHC+LHLPGSSDSPAS+S++AG T N + +L+ T K CQ C
Sbjct: 49 RLECNGTISAHCNLHLPGSSDSPASSSRVAGITGIKTNTICKKCAQNVQLYGTPKPCQYC 108
Query: 62 GVMLQF 67
++ F
Sbjct: 109 NIIAAF 114
>gi|219881536 hypothetical protein LOC199870 isoform 1 [Homo
sapiens]
Length = 341
Score = 66.2 bits (160), Expect = 9e-11
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 6/66 (9%)
Query: 8 RLECSGAISAHCSLHLPGSSDSPASASQIAGTTDAIWNE-----QEKAELF-TDKFCQVC 61
RLEC+G ISAHC+LHLPGSSDSPAS+S++AG T N + +L+ T K CQ C
Sbjct: 49 RLECNGTISAHCNLHLPGSSDSPASSSRVAGITGIKTNTICKKCAQNVQLYGTPKPCQYC 108
Query: 62 GVMLQF 67
++ F
Sbjct: 109 NIIAAF 114
>gi|111118986 alpha-1A-adrenergic receptor isoform 2 [Homo sapiens]
Length = 475
Score = 63.2 bits (152), Expect = 7e-10
Identities = 31/39 (79%), Positives = 33/39 (84%)
Query: 2 ESCSVTRLECSGAISAHCSLHLPGSSDSPASASQIAGTT 40
+S SVTRLECSG I AHC+L LPGS DSPASASQ AGTT
Sbjct: 425 KSRSVTRLECSGMILAHCNLRLPGSRDSPASASQAAGTT 463
>gi|168229156 NFKB activating protein [Homo sapiens]
Length = 415
Score = 62.4 bits (150), Expect = 1e-09
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 6/180 (3%)
Query: 452 YSGPYSISQVVENQLPHCLPAHDSKQRLDSISYCQLT-RDCFPEKPVPLSLNQQENNSGS 510
Y G YS + P L K+R +S+ +L+ R+ E P N
Sbjct: 100 YYGSYSRPYGSDKPWPSLL----DKEREESLRQKRLSERERIGELGAPEVWGLSPKNPEP 155
Query: 511 YSVESEVYKHLSSENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDL 570
S E + + +T ++K +K R E K+R +K+ SK K KK ED+D
Sbjct: 156 DSDEHTPVEDEEPKKSTTSASTSEEEKKKKSSRSKERSKKRRKKKSSKRKHKKYSEDSDS 215
Query: 571 DKDKSIRQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEEML 630
D D S E+++ + K K +KKK +K +K RKE S + ++EE L
Sbjct: 216 DSD-SETDSSDEDNKRRAKKAKKKEKKKKHRSKKYKKKRSKKSRKESSDSSSKESQEEFL 274
Score = 30.0 bits (66), Expect = 6.8
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 550 ERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKE 609
+ PE + +H ED + K + EE + K S K + +K++K +
Sbjct: 151 KNPEPDSDEHT---PVEDEEPKKSTTSASTSEEEKKKKSSRSKERSKKRRKK-----KSS 202
Query: 610 ERKHRKEKKKSVEERTEEEMLWDE 633
+RKH+K + S + E DE
Sbjct: 203 KRKHKKYSEDSDSDSDSETDSSDE 226
>gi|11968019 p53 target zinc finger protein isoform 1 [Homo sapiens]
Length = 289
Score = 60.5 bits (145), Expect = 5e-09
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 51 ELFTDKFCQVCGVMLQFESQRISHYEGEKHAQNVSFYFQMHG-----------EQNEVPG 99
EL +C++C V L Q +HY+G+ H + + Y+ + E P
Sbjct: 65 ELCKPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPAATPV 124
Query: 100 KKMKMHVENFQVH-RYEGVDKNKFCDLCNMMFSSPLIAQSHYVGKVHAKKLKQLMEEHDQ 158
+ + +F+ R +N +C LC+ FSSP +AQ+HY GK HAK+L+ + +
Sbjct: 125 VPVPPQMGSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAEAQSNS 184
Query: 159 ASPS 162
S S
Sbjct: 185 FSES 188
Score = 44.3 bits (103), Expect = 3e-04
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 23/108 (21%)
Query: 115 EGVDKNKFCDLCNMMFSSPLIAQSHYVGKVHAKKLKQLMEEHDQASPS------------ 162
E + K +C LCN+ +S AQ+HY GK H KKL+ + P+
Sbjct: 64 EELCKPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPAATP 123
Query: 163 ---------GFQP--EMAFSMRTYVCHICSIAFTSLDMFRSHMQGSEH 199
F+P + + C +C +F+S + ++H QG H
Sbjct: 124 VVPVPPQMGSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNH 171
>gi|23199978 p53 target zinc finger protein isoform 2 [Homo sapiens]
Length = 288
Score = 60.5 bits (145), Expect = 5e-09
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 51 ELFTDKFCQVCGVMLQFESQRISHYEGEKHAQNVSFYFQMHG-----------EQNEVPG 99
EL +C++C V L Q +HY+G+ H + + Y+ + E P
Sbjct: 65 ELCKPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPAATPV 124
Query: 100 KKMKMHVENFQVH-RYEGVDKNKFCDLCNMMFSSPLIAQSHYVGKVHAKKLKQLMEEHDQ 158
+ + +F+ R +N +C LC+ FSSP +AQ+HY GK HAK+L+ + +
Sbjct: 125 VPVPPQMGSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAEAQSNS 184
Query: 159 ASPS 162
S S
Sbjct: 185 FSES 188
Score = 44.3 bits (103), Expect = 3e-04
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 23/108 (21%)
Query: 115 EGVDKNKFCDLCNMMFSSPLIAQSHYVGKVHAKKLKQLMEEHDQASPS------------ 162
E + K +C LCN+ +S AQ+HY GK H KKL+ + P+
Sbjct: 64 EELCKPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPAATP 123
Query: 163 ---------GFQP--EMAFSMRTYVCHICSIAFTSLDMFRSHMQGSEH 199
F+P + + C +C +F+S + ++H QG H
Sbjct: 124 VVPVPPQMGSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNH 171
>gi|170932471 hypothetical protein LOC79703 [Homo sapiens]
Length = 677
Score = 58.2 bits (139), Expect = 2e-08
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 8 RLECSGAISAHCSLHLPGSSDSPASASQIAGTTDA 42
R ECSGA+SAHC+LHLPGSSDS AS ++AG TDA
Sbjct: 114 RPECSGAVSAHCNLHLPGSSDSHASVPRVAGITDA 148
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 57.4 bits (137), Expect = 4e-08
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 514 ESEVYKHLSSENNTADHQAGHKQKHQK--RKRHLEEGKERPEKEQSKHKRKKSYEDTDLD 571
E E K + Q G +++ +K RK E K+R E+++ K ++KK ++ +
Sbjct: 91 EKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKRE 150
Query: 572 KDKSIRQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEE 628
K++ R+RKR++ R K K + R +K+ KE R+ +KE+KK ++ E +
Sbjct: 151 KERGKRERKRKK-RKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERK 206
Score = 57.0 bits (136), Expect = 5e-08
Identities = 28/98 (28%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 531 QAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSS 590
+ G K+K +++KR E GKER K + + K++K + + K K ++++ + R +
Sbjct: 57 ERGKKEKKKRKKR--ERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRER 114
Query: 591 GKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEE 628
K K RK+++ + + +RK R++KK+ E + E+E
Sbjct: 115 KKKKERKERERENKQRRERKRKKRRKKKRRKERKREKE 152
Score = 54.7 bits (130), Expect = 3e-07
Identities = 31/108 (28%), Positives = 62/108 (57%), Gaps = 4/108 (3%)
Query: 524 ENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSK---HKRKKSYEDTDLDKDKSIRQRK 580
E + + ++K +KR+R +E K+R ++E+ K KRK+ + ++K R+RK
Sbjct: 39 ERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRK 98
Query: 581 RE-EDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEE 627
+E + R + G+ + +KKK+ + E ++R+ RK KK+ ++R +E
Sbjct: 99 KEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKE 146
Score = 53.9 bits (128), Expect = 4e-07
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 535 KQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDL-----DKDKSIRQRKREEDRVKVS 589
K++ +KRK ++ KER EKE+ K K++K + K K R+ + E++ +
Sbjct: 73 KERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRE 132
Query: 590 SGKLKHRKKKKSHDVPSEKEE-RKHRKEKKKSVEERTEE 627
+ K RKKK+ + EKE ++ RK KK+ EER ++
Sbjct: 133 RKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKK 171
Score = 53.5 bits (127), Expect = 6e-07
Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 524 ENNTADHQAGHKQKHQK-RKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKD--------- 573
E + + K++ +K R++ +E K+R K++ + +RKK E + +++
Sbjct: 76 ERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKR 135
Query: 574 KSIRQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEE 628
K R++KR ++R + + RK+KK EK+ ++RKE+KK E + E
Sbjct: 136 KKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRE 190
Score = 52.8 bits (125), Expect = 1e-06
Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 535 KQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRK--REEDRVKVSSGK 592
+++ +KR+R E +ER +KE+ K K+++ ++ + + + +QRK RE++R K K
Sbjct: 42 EREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEK 101
Query: 593 LKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEE 628
K +K++ +K+ERK R+ + K ER ++
Sbjct: 102 KKRERKQRGRRERKKKKERKERERENKQRRERKRKK 137
Score = 50.4 bits (119), Expect = 5e-06
Identities = 29/101 (28%), Positives = 57/101 (56%), Gaps = 14/101 (13%)
Query: 519 KHLSSENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQ 578
K EN + K++ +KR++ + KER ++E+ + KRKK E+ + ++++ ++
Sbjct: 121 KERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKK--EEREKKRERNRKE 178
Query: 579 RKREEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKK 619
RK+E +R K R+++K K+ER+ +KE+KK
Sbjct: 179 RKKERER--------KERRERKK----ERKKERRKKKERKK 207
Score = 48.5 bits (114), Expect = 2e-05
Identities = 26/94 (27%), Positives = 47/94 (50%)
Query: 535 KQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSGKLK 594
+ + +K +R E+ K EKE+ + + KK + + R+RKR+E + + K
Sbjct: 33 ESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREK 92
Query: 595 HRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEE 628
R+K+K E+++R R+ KKK + E E
Sbjct: 93 ERRKRKKEKKKRERKQRGRRERKKKKERKERERE 126
Score = 46.2 bits (108), Expect = 9e-05
Identities = 26/88 (29%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 542 KRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQ-RKREEDRVKVSSGKLKHRKKKK 600
+R E KER E+E+ K +R+K + K+K R+ R+R ++R + + K RK+++
Sbjct: 31 QRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERR 90
Query: 601 SHDVPSEKEERKHRKEKKKSVEERTEEE 628
+ K+E+K R+ K++ ER +++
Sbjct: 91 EKERRKRKKEKKKRERKQRGRRERKKKK 118
Score = 44.3 bits (103), Expect = 3e-04
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 544 HLEEGKERPEKEQSKHKRKKSYEDTDLDKD-KSIRQRKREEDRVKVSSGKLKHRKKK--- 599
H+ + + E E+ K +R++ + +K+ K R +K ++ R K GK + RK+K
Sbjct: 24 HISKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKERE 83
Query: 600 KSHDVPSEKEERKHRKEKKK 619
K EKE RK +KEKKK
Sbjct: 84 KQRKERREKERRKRKKEKKK 103
Score = 32.0 bits (71), Expect = 1.8
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 568 TDLDKDKSIRQRKREE---DRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEER 624
T + ++ +R+RE+ +R K + ++KKK KE + RKE++K +ER
Sbjct: 30 TQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKER 89
Query: 625 TEEE 628
E+E
Sbjct: 90 REKE 93
Score = 31.6 bits (70), Expect = 2.3
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 503 QQENNSGSYSVESEVYKHLSSENNTADHQAGHKQKHQK--RKRHLEEGKERPEKEQSKHK 560
++EN + K + + + G +++ +K +K E+ +ER KE+ K +
Sbjct: 124 ERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKER 183
Query: 561 RKKSYEDTDLDKDKSIRQRK-REEDR 585
+K + ++ K R++K R++DR
Sbjct: 184 ERKERRERKKERKKERRKKKERKKDR 209
Score = 30.8 bits (68), Expect = 4.0
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 570 LDKDKSIRQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEE 628
+ K + R+ +R+++R + K + K++K EK++RK R+ K+ +R E E
Sbjct: 25 ISKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKERE 83
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 57.0 bits (136), Expect = 5e-08
Identities = 32/126 (25%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 504 QENNSGSYSVESEVYKHLSSENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKK 563
+ G ESE K E + + ++K +KR+R +E K +KE+ + K+++
Sbjct: 46 ETRKEGKKERESERKK----ERREREKRKREREKERKRERGKKEKKGERKKEERERKKRR 101
Query: 564 SYEDTDLDKDKSIRQRKREEDRVKVSS-GKLKHRKKKKSHDVPSEKEERKHRKEKKKSVE 622
++ ++K R++K +++R + S GK + RK+++ + E+E +K +EK++ +
Sbjct: 102 REKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERK 161
Query: 623 ERTEEE 628
ER + E
Sbjct: 162 ERKKRE 167
Score = 56.2 bits (134), Expect = 9e-08
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 13/117 (11%)
Query: 524 ENNTADHQAGHKQKHQK-RKRHLEEGKERPEKEQSKHKRKKSYE--DTDLDKDKSIRQRK 580
EN + + K+K +K R R +EGKER KE+ K + +K E + +K++ ++RK
Sbjct: 105 ENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERK 164
Query: 581 R----------EEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEE 627
+ EE + K + K + +K E++ER+ RK+++K EER +E
Sbjct: 165 KRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKE 221
Score = 54.7 bits (130), Expect = 3e-07
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Query: 535 KQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLD------KDKSIRQRKREEDRVKV 588
+++ +K++R +E KE EKE+ K K KK T + K++ R+ ++E +R K
Sbjct: 93 EERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKE 152
Query: 589 SSGKLKHRKKKKSHD---VPSEKEERKHRKEKKKSVEERTEEE 628
K + RK++K + V ++EERK ++ K++ ER +E
Sbjct: 153 EREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKE 195
Score = 52.0 bits (123), Expect = 2e-06
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 524 ENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRK--R 581
E + G K++ +RK+ E ++R + + + KR++ ++ ++ K R+RK R
Sbjct: 42 EREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRR 101
Query: 582 EEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEEMLWDE 633
E K K K +KK+K + KE ++ +++++ EER E E +E
Sbjct: 102 REKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEE 153
Score = 50.8 bits (120), Expect = 4e-06
Identities = 28/104 (26%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 524 ENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREE 583
E + + ++K ++RK+ E KER KE+ K +RK+ E + K+K ++RK+ E
Sbjct: 132 ERERKEERKREERKERERKKE-EREKERERKERKKRERKQVGEKEEERKEKERKERKKRE 190
Query: 584 DRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEE 627
K + + +++++ +KEERK ++K + R +E
Sbjct: 191 RNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREKE 234
Score = 49.3 bits (116), Expect = 1e-05
Identities = 30/103 (29%), Positives = 59/103 (57%), Gaps = 9/103 (8%)
Query: 531 QAGHKQKHQKRKRHLE---EGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREE--DR 585
Q G + + ++R+R +E EGK+ E E+ K +R++ + +K++ + K+E+ +R
Sbjct: 31 QPGWQSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGER 90
Query: 586 VKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEE 628
K + K R++K++ E EE++ RK+K+K RT +E
Sbjct: 91 KKEERERKKRRREKEN----KEGEEKEKRKKKEKKERGRTSKE 129
Score = 48.1 bits (113), Expect = 2e-05
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 11/140 (7%)
Query: 503 QQENNSGSYSVESEVYKHLSSENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSK---H 559
++EN G E E K + + G K++ +K +R EE KER K++ +
Sbjct: 103 EKENKEGE---EKEKRKKKEKKERGRTSKEG-KERERKEERKREERKERERKKEEREKER 158
Query: 560 KRK--KSYEDTDLDKDKSIRQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEK 617
+RK K E + + + R+ K ++R K + + +K+++ + K+ERK ++E+
Sbjct: 159 ERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEER 218
Query: 618 KKSVEERTEEEMLWDESILG 637
KK E + + + W E G
Sbjct: 219 KK--ERQKDRQTNWREKERG 236
Score = 43.5 bits (101), Expect = 6e-04
Identities = 29/132 (21%), Positives = 64/132 (48%), Gaps = 11/132 (8%)
Query: 503 QQENNSGSYSVESEVYKHLSSENNTADHQAGHKQKHQKRKRHLEEGKERPEK------EQ 556
+++ G S E + + + K++ ++++R +E K+R K E+
Sbjct: 118 KEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEE 177
Query: 557 SKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKE 616
K K +K + ++++ ++RK+E +R K + K RKKK+ +K+ + + +E
Sbjct: 178 RKEKERKERK----KRERNRKERKKERER-KERRERKKERKKKEERKKERQKDRQTNWRE 232
Query: 617 KKKSVEERTEEE 628
K++ ER E +
Sbjct: 233 KERGKRERKERK 244
>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform
b [Homo sapiens]
Length = 1524
Score = 55.1 bits (131), Expect = 2e-07
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 520 HLSSENNTADHQ--AGHKQKHQKRKRHLEEGKERPEK--EQSKHKRKKSYEDTDLDKDKS 575
H+S E+N A+ Q A ++ K K + L + +E E++K KR+K+ K+K
Sbjct: 284 HISQEDNVANKQTLASYRSKATKERDKLLKQEEMKSLAFEKAKLKREKADALEAKKKEKE 343
Query: 576 IRQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVE 622
+++KREE + V +LK +++K+ V EKE K R+EK+K VE
Sbjct: 344 DKEKKREELKKIVEEERLKKKEEKERLKVEREKEREKLREEKRKYVE 390
Score = 34.3 bits (77), Expect = 0.36
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 535 KQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRK--REEDRVKVSSGK 592
K K +K + KE+ +KE+ + + KK E+ L K + + K RE++R K+ K
Sbjct: 326 KLKREKADALEAKKKEKEDKEKKREELKKIVEEERLKKKEEKERLKVEREKEREKLREEK 385
Query: 593 LKHRKKKKSHDVPSEKEERKHRKEKKKSVEERT 625
K+ + K P E E KE + +T
Sbjct: 386 RKYVEYLKQWSKPREDMECDDLKELPEPTPVKT 418
Score = 33.1 bits (74), Expect = 0.80
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 541 RKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSGKLKHRK--- 597
RKR E+ KE+ +K + K ++ K E + D SI + +RE+ + S + ++
Sbjct: 636 RKRKEEKLKEQEQKMKEKQEKLKEDEQRNSTADISIGEEEREDFDTSIESKDTEQKELDQ 695
Query: 598 --KKKSHDVPSEKEERKHRKEKKKSVEERTEEEML 630
+ D P + + K + +E T +E +
Sbjct: 696 DMVTEDEDDPGSHKRGRRGKRGQNGFKEFTRQEQI 730
Score = 30.4 bits (67), Expect = 5.2
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 532 AGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTD-LDKDKSIRQRKREEDRVKVSS 590
A ++ ++ H+ + K+ R K+ ++ D L K + ++ E+ ++K
Sbjct: 272 ANRRRGRPPKRIHISQEDNVANKQTLASYRSKATKERDKLLKQEEMKSLAFEKAKLKREK 331
Query: 591 GKLKHRKKKKSHDVPSEKEERK----HRKEKKKSVEERTEEE 628
KKK+ D ++EE K + KKK +ER + E
Sbjct: 332 ADALEAKKKEKEDKEKKREELKKIVEEERLKKKEEKERLKVE 373
>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform
a [Homo sapiens]
Length = 1556
Score = 55.1 bits (131), Expect = 2e-07
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 520 HLSSENNTADHQ--AGHKQKHQKRKRHLEEGKERPEK--EQSKHKRKKSYEDTDLDKDKS 575
H+S E+N A+ Q A ++ K K + L + +E E++K KR+K+ K+K
Sbjct: 284 HISQEDNVANKQTLASYRSKATKERDKLLKQEEMKSLAFEKAKLKREKADALEAKKKEKE 343
Query: 576 IRQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVE 622
+++KREE + V +LK +++K+ V EKE K R+EK+K VE
Sbjct: 344 DKEKKREELKKIVEEERLKKKEEKERLKVEREKEREKLREEKRKYVE 390
Score = 34.3 bits (77), Expect = 0.36
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 535 KQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRK--REEDRVKVSSGK 592
K K +K + KE+ +KE+ + + KK E+ L K + + K RE++R K+ K
Sbjct: 326 KLKREKADALEAKKKEKEDKEKKREELKKIVEEERLKKKEEKERLKVEREKEREKLREEK 385
Query: 593 LKHRKKKKSHDVPSEKEERKHRKEKKKSVEERT 625
K+ + K P E E KE + +T
Sbjct: 386 RKYVEYLKQWSKPREDMECDDLKELPEPTPVKT 418
Score = 33.1 bits (74), Expect = 0.80
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 541 RKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSGKLKHRK--- 597
RKR E+ KE+ +K + K ++ K E + D SI + +RE+ + S + ++
Sbjct: 668 RKRKEEKLKEQEQKMKEKQEKLKEDEQRNSTADISIGEEEREDFDTSIESKDTEQKELDQ 727
Query: 598 --KKKSHDVPSEKEERKHRKEKKKSVEERTEEEML 630
+ D P + + K + +E T +E +
Sbjct: 728 DMVTEDEDDPGSHKRGRRGKRGQNGFKEFTRQEQI 762
Score = 30.4 bits (67), Expect = 5.2
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 532 AGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTD-LDKDKSIRQRKREEDRVKVSS 590
A ++ ++ H+ + K+ R K+ ++ D L K + ++ E+ ++K
Sbjct: 272 ANRRRGRPPKRIHISQEDNVANKQTLASYRSKATKERDKLLKQEEMKSLAFEKAKLKREK 331
Query: 591 GKLKHRKKKKSHDVPSEKEERK----HRKEKKKSVEERTEEE 628
KKK+ D ++EE K + KKK +ER + E
Sbjct: 332 ADALEAKKKEKEDKEKKREELKKIVEEERLKKKEEKERLKVE 373
>gi|58294160 breast carcinoma amplified sequence 4 isoform a [Homo
sapiens]
Length = 211
Score = 54.7 bits (130), Expect = 3e-07
Identities = 25/37 (67%), Positives = 29/37 (78%)
Query: 5 SVTRLECSGAISAHCSLHLPGSSDSPASASQIAGTTD 41
S +ECSG I A C+L LPGSSDSPASASQ+AG T+
Sbjct: 160 SFRNVECSGTIPARCNLRLPGSSDSPASASQVAGITE 196
>gi|6005810 mitogen-activated protein kinase kinase kinase kinase 1
isoform 2 [Homo sapiens]
Length = 833
Score = 54.7 bits (130), Expect = 3e-07
Identities = 25/33 (75%), Positives = 29/33 (87%)
Query: 8 RLECSGAISAHCSLHLPGSSDSPASASQIAGTT 40
RLECSG IS HC+L LPGSS+SPASAS++AG T
Sbjct: 799 RLECSGTISPHCNLLLPGSSNSPASASRVAGIT 831
>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
Length = 2663
Score = 54.7 bits (130), Expect = 3e-07
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 497 VPLSLNQQENNSGSYSVESEVYKHLSSENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQ 556
+P + QE G + S+ ++ S + + + + +K + + G+++ EK
Sbjct: 1143 LPRTDGLQEKEEGREAYASDRHRKSSDKQHPERQKDKEPRDRRKDRGAADAGRDKKEKVF 1202
Query: 557 SKHKRKKSYEDTDLDKDKSIR------QRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEE 610
KHK KK E T+ KD+ R Q K+ + ++ + K KH + K+ EK +
Sbjct: 1203 EKHKEKKDKESTEKYKDRKDRASVDSTQDKKNKQKLPEKAEK-KHAAEDKAKSKHKEKSD 1261
Query: 611 RKHRKEKK--------KSVEERTEEEML 630
++H KE+K KS+ E+ EEE L
Sbjct: 1262 KEHSKERKSSRSADAEKSLLEKLEEEAL 1289
Score = 44.3 bits (103), Expect = 3e-04
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 21/133 (15%)
Query: 521 LSSENN--TADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQ 578
LS+EN H H +K +K + E KE K++ KR K DT+ D +S R+
Sbjct: 678 LSTENKLKVLKHDRDHFKKEEKLSKMKLEEKEWLFKDEKSLKRIK---DTNKDISRSFRE 734
Query: 579 RK------REEDRVKVSSGK------LKHRKKKKSHDVPSEKEERKHRKEKKKSVEE--- 623
K +E +K S K K +KKKS D PS+ E++ KE K S E+
Sbjct: 735 EKDRSNKAEKERSLKEKSPKEEKLRLYKEERKKKSKDRPSKLEKKNDLKEDKISKEKEKI 794
Query: 624 -RTEEEMLWDESI 635
+ ++E L E +
Sbjct: 795 FKEDKEKLKKEKV 807
Score = 39.3 bits (90), Expect = 0.011
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 535 KQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQ--RKREEDRVKVSSGK 592
++ H R++ ++G ++ KE++K +R Y++ DKDKS + K ++D+ K
Sbjct: 1001 ERHHPAREKEKKDGPDKERKEKTKPER---YKEKSSDKDKSEKSILEKCQKDKEFDKCFK 1057
Query: 593 LKHRKKKKSHDVPSEKEERKHRKEKKKSVEER 624
K K+K D + +ERK ++ K +E+
Sbjct: 1058 EKKDTKEKHKDTHGKDKERKASLDQGKEKKEK 1089
Score = 33.5 bits (75), Expect = 0.62
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 14/96 (14%)
Query: 546 EEGKERPEKEQSKHKRKKSYEDTDLDK------DKSIRQRKREEDRVKVSSGKLKHRKKK 599
E+ KER + S+ + K+ Y + K DK+ +RK + ++ K G L + KK
Sbjct: 883 EDSKER--RRDSRAREKRDYREPFFRKKDRDYLDKNSEKRKEQTEKHKSVPGYLSEKDKK 940
Query: 600 KSHDVPSEKEER------KHRKEKKKSVEERTEEEM 629
+ + ++ + K R++ + EE EE+
Sbjct: 941 RRESAEAGRDRKDALESCKERRDGRAKPEEAHREEL 976
Score = 33.5 bits (75), Expect = 0.62
Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 39/144 (27%)
Query: 529 DHQAGHKQKHQK---RKRHLEEGKER-------------PEKEQSKHKRKKSYEDTDLDK 572
D + HK H K RK L++GKE+ EK+ K ++KS+ D+
Sbjct: 1061 DTKEKHKDTHGKDKERKASLDQGKEKKEKAFPGIISEDFSEKKDDKKGKEKSWYIADIFT 1120
Query: 573 DKSIRQR-----------------------KREEDRVKVSSGKLKHRKKKKSHDVPSEKE 609
D+S R ++EE R +S + + K+ + +KE
Sbjct: 1121 DESEDDRDSCMGSGFKMGEASDLPRTDGLQEKEEGREAYASDRHRKSSDKQHPERQKDKE 1180
Query: 610 ERKHRKEKKKSVEERTEEEMLWDE 633
R RK++ + R ++E ++++
Sbjct: 1181 PRDRRKDRGAADAGRDKKEKVFEK 1204
Score = 32.0 bits (71), Expect = 1.8
Identities = 28/126 (22%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 515 SEVYKHLSSENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDK 574
S ++ +N A+ + K+K K ++ +ER K++SK + K + DL +DK
Sbjct: 729 SRSFREEKDRSNKAEKERSLKEKSPKEEKLRLYKEER--KKKSKDRPSKLEKKNDLKEDK 786
Query: 575 SIRQRKR--EEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEEMLWD 632
+++++ +ED+ K+ K K ++ + D K + ++ K S+ + + D
Sbjct: 787 ISKEKEKIFKEDKEKLK--KEKVYREDSAFDEYCNKNQFLENEDTKFSLSDDQRDRWFSD 844
Query: 633 ESILGF 638
S F
Sbjct: 845 LSDSSF 850
Score = 30.8 bits (68), Expect = 4.0
Identities = 31/148 (20%), Positives = 58/148 (39%), Gaps = 31/148 (20%)
Query: 514 ESEVYKHLSSENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYE------- 566
E E ++H SS + + + K++ ++K E+ KE ++ S K E
Sbjct: 1346 EKERHRHSSSSSKKSHDRERAKKEKAEKKEKGEDYKEGGSRKDSGQYEKDFLEADAYGVS 1405
Query: 567 -----DTDLDKDKSIR----QRKREEDRVKVSSGK---------------LKHRKKKKSH 602
D + + DK+I ++K + D + S K LK +KK++ H
Sbjct: 1406 YNMKADIEDELDKTIELFSTEKKDKNDSEREPSKKIEKELKPYGSSAINILKEKKKREKH 1465
Query: 603 DVPSEKEERKHRKEKKKSVEERTEEEML 630
E+ +HR + +E+L
Sbjct: 1466 REKWRDEKERHRDRHADGLLRHHRDELL 1493
>gi|61969666 arginine-fifty homeobox [Homo sapiens]
Length = 315
Score = 54.3 bits (129), Expect = 3e-07
Identities = 26/49 (53%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 6 VTRLECSGAISAHCSLHLPGSSDSPASASQIAGTTDAIWNEQEKAELFT 54
+++LECSG +SA+CSL+LPGS+D P SAS++A TT AI ++ FT
Sbjct: 39 LSKLECSGTVSAYCSLNLPGSTDPPTSASRVAATT-AIRRRHKERTSFT 86
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 53.9 bits (128), Expect = 4e-07
Identities = 29/101 (28%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Query: 535 KQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSGKLK 594
++ + R+R+ + G+ER ++ + + R++ + + + R+RKRE DR + + +
Sbjct: 106 RETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAERE 165
Query: 595 HRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEEMLWDESI 635
RKK++ +KE +K RKEKKK + R +++ W E I
Sbjct: 166 ERKKER------KKERKKERKEKKKEEKRREDKKRKWGEGI 200
Score = 52.4 bits (124), Expect = 1e-06
Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 9/128 (7%)
Query: 503 QQENNSGSYSVESEVYKHLSSENNTADHQAGHKQKHQKRKRHLEEGKERP---EKEQSKH 559
++EN + + + +H + T + +QK + R+R E ER ++E+ +
Sbjct: 26 ERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETERETERQRERQRQ 85
Query: 560 KRKKSYEDTDLDKDKSIRQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKK 619
+ +K D + DKD+ R+RKRE DR + ++RK + D +E+E + R+ +++
Sbjct: 86 RERKRQTDRERDKDRD-RERKRETDR-----NRERNRKGGRERDKQTERERDRERERQRQ 139
Query: 620 SVEERTEE 627
ER +
Sbjct: 140 RERERQRQ 147
Score = 45.4 bits (106), Expect = 2e-04
Identities = 33/131 (25%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 503 QQENNSGSYSVESEVYKHLSSENNTADHQAGHKQK--HQKRKRHLEEGKERP---EKEQS 557
++E + G E E + EN T + + H+Q+ H++R R + KER E+++
Sbjct: 8 KRETDRGK-ETERERDRQRERENQT-ERENRHRQRDRHRERDRQTDREKERERQKERDRQ 65
Query: 558 KHKRKKSYEDTDLDKDKSI-RQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKE 616
+ + +++ +T+ +++ R+RKR+ DR + K + R++K+ D E+ + R+
Sbjct: 66 RQRERETERETERQRERQRQRERKRQTDRER---DKDRDRERKRETDRNRERNRKGGRER 122
Query: 617 KKKSVEERTEE 627
K++ ER E
Sbjct: 123 DKQTERERDRE 133
Score = 40.4 bits (93), Expect = 0.005
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 536 QKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSGKLKH 595
++ ++RKR + GKE E+ + ++++ T+ + R R RE DR + + K
Sbjct: 2 ERQRERKRETDRGKET---ERERDRQRERENQTERENRHRQRDRHRERDR---QTDREKE 55
Query: 596 RKKKKSHDVPSEKEERKHRKEKKKSVEERTEE 627
R+++K D ++E R+ +++ +R E
Sbjct: 56 RERQKERDRQRQRERETERETERQRERQRQRE 87
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 53.9 bits (128), Expect = 4e-07
Identities = 28/92 (30%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 535 KQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSGKLK 594
K+K +K EE +E E+E+ + KRK+ ++ +K+K + ++ E+ + K K +
Sbjct: 3 KKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKR 62
Query: 595 HRKKKKSHDVPSEKEERKHRKEKKKSVEERTE 626
RK+KK + E+EE + +E++K EE+ E
Sbjct: 63 KRKRKKKKE-EEEREEEEEEEEEEKEEEEKEE 93
Score = 53.9 bits (128), Expect = 4e-07
Identities = 29/110 (26%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 514 ESEVYKHLSSENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQS----KHKRKKSYEDTD 569
E+E + + + K+K +++K+ +E ++R EKE+ K KRKK E+ +
Sbjct: 15 ETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEE 74
Query: 570 LDKDKSIRQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKK 619
++++ + ++EE+ K + K +KK++ + EK++++ RK KKK
Sbjct: 75 REEEEEEEEEEKEEEE-KEEGRRRKKKKKRRRKEEEEEKKKKRRRKTKKK 123
Score = 50.4 bits (119), Expect = 5e-06
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 14/93 (15%)
Query: 536 QKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSGKLKH 595
+K +K+K+ EE +E E E+ + K K E R+ KR+E K + + +
Sbjct: 1 KKKKKKKKETEETEETEETEEEEEKEGKRKEK---------RKEKRKEKEKKKKTKETEK 51
Query: 596 RKKKKSHDVPSEKEERKHRKEKKKSVEERTEEE 628
RK+K+ E+++RK +++KKK EER EEE
Sbjct: 52 RKEKEE-----EEKKRKRKRKKKKEEEEREEEE 79
Score = 50.1 bits (118), Expect = 6e-06
Identities = 27/110 (24%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 519 KHLSSENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQ 578
K T + + +++ +++++ E+ KE+ +K+++K K+ ++ + K K R+
Sbjct: 8 KETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRK 67
Query: 579 RKREEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEE 628
+K+EE+ + + + K+++ EKEE + RK+KKK + EEE
Sbjct: 68 KKKEEEEREEEEEEEEEEKEEE------EKEEGRRRKKKKKRRRKEEEEE 111
>gi|78000165 sorbin and SH3 domain containing 1 isoform 4 [Homo
sapiens]
Length = 1151
Score = 53.1 bits (126), Expect = 8e-07
Identities = 27/42 (64%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 2 ESCSVT--RLECSGAISAHCSLHLPGSSDSPASASQIAGTTD 41
+SCSV RLECSG + AHCSL L SS+ P SASQ+AGT D
Sbjct: 435 KSCSVMSPRLECSGTVIAHCSLKLLDSSNPPTSASQVAGTAD 476
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 52.4 bits (124), Expect = 1e-06
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 514 ESEVYKHLSSENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKD 573
E + + E T + + ++R+R + ++R K Q++ +R+ E + + D
Sbjct: 172 ERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREG-ERETD 230
Query: 574 KSIRQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEEMLWDE 633
+ R+R+R+ DR K + R +K+ +KE +K RKEKKK + R +++ W E
Sbjct: 231 RR-RERQRDRDRGKERD---RERDRKEERKKERKKERKKERKEKKKEEKRREDKKRKWGE 286
Query: 634 SI 635
I
Sbjct: 287 GI 288
Score = 43.1 bits (100), Expect = 8e-04
Identities = 25/116 (21%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 514 ESEVYKHLSSENNTADHQAGHKQKHQKRKRHLEEGKERP-EKEQSKHKRKKSYEDTDLDK 572
E E ++ E T + ++K + R+R + G+ER ++++ K + +++ +D D +
Sbjct: 106 EKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQR 165
Query: 573 D-KSIRQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEE 627
+ ++ R+R RE ++ K + + R +++ + E++ + R ++K+ ER E
Sbjct: 166 ETETERERDREREKQKERETE-RDRDRQRDTEKERERQTDRERDRQRKTQTERQRE 220
Score = 42.7 bits (99), Expect = 0.001
Identities = 27/122 (22%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Query: 516 EVYKHLSSENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKS 575
+ +K ++ + ++ ++R R + +ER KE+ ++ + + T++++D+
Sbjct: 67 QAHKDADGDDRQRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDRE 126
Query: 576 IRQ---RKREEDRVKV-----SSGKLKHRKKKKSHDVPSEKE-ERKHRKEKKKSVEERTE 626
+ R+RE DR + K + R+ +K D E E ER+ +E++K E TE
Sbjct: 127 REKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDREREKQKERETE 186
Query: 627 EE 628
+
Sbjct: 187 RD 188
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 52.4 bits (124), Expect = 1e-06
Identities = 31/101 (30%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 529 DHQAGHKQKHQKRKRHLEEGKERPEKE-QSKHKRKKSYEDTDLDKDKSIRQRKREEDRVK 587
D++ K+K +K+K+ +E KE+ +K+ SK K E K++ RQ++ EE+R+K
Sbjct: 308 DNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIK 367
Query: 588 VSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEE 628
+L+ + K+ + E+E+R+ +K+K+K +ER ++E
Sbjct: 368 ----RLEELEAKRKEEERLEQEKRERKKQKEKERKERLKKE 404
Score = 39.7 bits (91), Expect = 0.009
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 30/134 (22%)
Query: 524 ENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLD---KDKSIR--- 577
E+ D A K K +K+ ++ +ER ++++ K K +K E +L+ KD+S +
Sbjct: 213 ESGNEDDDASFKIKTVAQKKAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKES 272
Query: 578 QRKREEDRVK----VSSGKLK------------------HRKKKKSHDVPSEKEERKHRK 615
QRK EE+ VK V +G + +KKK EKEE++ K
Sbjct: 273 QRKFEEETVKSKVTVDTGVIPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKE--K 330
Query: 616 EKKKSVEERTEEEM 629
EKKK + T + M
Sbjct: 331 EKKKGPSKATVKAM 344
Score = 39.3 bits (90), Expect = 0.011
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
Query: 502 NQQENNSGSYSVESEVYKHLSSENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKR 561
N++ + S S+ K S N++ + + Q RK G+++ +K +
Sbjct: 158 NKKWDGSEEDEDNSKKIKERSRINSSGESGDESDEFLQSRK-----GQKKNQKNKPGPNI 212
Query: 562 KKSYEDTDLD-KDKSIRQRK---REEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEK 617
+ ED D K K++ Q+K +E +R K K K RK K+ ++ + K+++ +KE
Sbjct: 213 ESGNEDDDASFKIKTVAQKKAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKES 272
Query: 618 KKSVEERT 625
++ EE T
Sbjct: 273 QRKFEEET 280
Score = 39.3 bits (90), Expect = 0.011
Identities = 41/179 (22%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 465 QLPHCLPAHDSKQRLDSISYCQLTRDCFPEK---PVPLSLNQQENNSGSYSVESEVYKHL 521
++P L + + + ++ + ++ PEK P P+ ++E+ + + E +
Sbjct: 453 KIPQQLESKEVSESMELCAAVEVMEQGVPEKEETPPPVEPEEEEDTEDAGLDDWEA---M 509
Query: 522 SSENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKR 581
+S+ T +K + K H+E KE PE+E+ + + ++ E+++ ++++
Sbjct: 510 ASDEET--------EKVEGNKVHIEV-KENPEEEEEEEEEEEEDEESEEEEEEEGESEGS 560
Query: 582 E--EDRVKVS----SGKLKHRKKKKSHDVPSE--------KEERKHRKEKKKSVEERTE 626
E E+ KVS SGK +K K SE KEER + K K++ + R E
Sbjct: 561 EGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSDDDRTKEERAYDKAKRRIEKRRLE 619
Score = 33.5 bits (75), Expect = 0.62
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 553 EKEQSKHKRKKSYEDTDLDKD---KSIRQRKREEDRVKVSSGKLKHR-KKKKSHDVPSEK 608
E ++SK K+KK + D D+D K + + E +K + + + + S+
Sbjct: 36 EPQKSKGKKKKEKKKQDFDEDDILKELEELSLEAQGIKADRETVAVKPTENNEEEFTSKD 95
Query: 609 EERKHRKEKKKSVEERTEEEM 629
+++K +K KK+S ++ EE+
Sbjct: 96 KKKKGQKGKKQSFDDNDSEEL 116
Score = 33.1 bits (74), Expect = 0.80
Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 44/181 (24%)
Query: 495 KPVPLSLNQQENNSGSYSVESEVYKHLSSENNTADHQAGHKQKHQKRKRHLEEGKERPEK 554
KP P + E++ S+ +++ K +E + + ++K + RK +E E +K
Sbjct: 207 KPGPNIESGNEDDDASFKIKTVAQK--KAEKKERERKKRDEEKAKLRKLKEKEELETGKK 264
Query: 555 EQSKHKRKK-------------------------------SYEDTDLDKDKSIRQRKR-- 581
+QSK K + + +D + DK K +++K+
Sbjct: 265 DQSKQKESQRKFEEETVKSKVTVDTGVIPASEEKAETPTAAEDDNEGDKKKKDKKKKKGE 324
Query: 582 -EEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRK----EKKKSVEE----RTEEEMLWD 632
EE + G K K + KEE + +K E+ K +EE R EEE L
Sbjct: 325 KEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEELEAKRKEEERLEQ 384
Query: 633 E 633
E
Sbjct: 385 E 385
Score = 32.7 bits (73), Expect = 1.1
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 533 GHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVK----- 587
G QK K+ EE ++ +K + + + S E D + D+ ++ RK ++ K
Sbjct: 152 GKAQKSNKKWDGSEEDEDNSKKIKERSRINSSGESGD-ESDEFLQSRKGQKKNQKNKPGP 210
Query: 588 -VSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEEMLWDESIL 636
+ SG K V +K E+K R E+KK EE+ + L ++ L
Sbjct: 211 NIESGNEDDDASFKIKTVAQKKAEKKER-ERKKRDEEKAKLRKLKEKEEL 259
Score = 32.3 bits (72), Expect = 1.4
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 552 PEKEQS----KHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSGKLKHRKKKKSHDVPSE 607
PEKE++ + + ++ ED LD +++ +E+ KV K+ K+ P E
Sbjct: 481 PEKEETPPPVEPEEEEDTEDAGLDDWEAMAS---DEETEKVEGNKVHIEVKEN----PEE 533
Query: 608 KEERKHRKEKKKSVEERTEEE 628
+EE + +E+ + EE EEE
Sbjct: 534 EEEEEEEEEEDEESEEEEEEE 554
Score = 31.2 bits (69), Expect = 3.1
Identities = 24/113 (21%), Positives = 57/113 (50%), Gaps = 22/113 (19%)
Query: 535 KQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKREEDRVKVSSGKLK 594
K++ +++KR EE +R E+ ++K K ++ E ++ K ++ K ++R+K GKL
Sbjct: 352 KEEEERQKREEEERIKRLEELEAKRKEEERLEQEKRERKK--QKEKERKERLK-KEGKLL 408
Query: 595 HRKKKKSH---------------DVPSE----KEERKHRKEKKKSVEERTEEE 628
+ ++++ +VPS+ K+ + +K+K + ++ E +
Sbjct: 409 TKSQREARARAEATLKLLQAQGVEVPSKDSLPKKRPIYEDKKRKKIPQQLESK 461
>gi|118442834 RPGRIP1-like isoform a [Homo sapiens]
Length = 1315
Score = 52.0 bits (123), Expect = 2e-06
Identities = 25/44 (56%), Positives = 30/44 (68%)
Query: 9 LECSGAISAHCSLHLPGSSDSPASASQIAGTTDAIWNEQEKAEL 52
L CS AISAHC+ LPGSSD PASASQ+ G T A + Q ++
Sbjct: 1106 LGCSSAISAHCNFRLPGSSDFPASASQVDGITGACHHTQPSEKI 1149
>gi|222446642 solute carrier family 36, member 3 isoform 1 [Homo
sapiens]
Length = 511
Score = 51.6 bits (122), Expect = 2e-06
Identities = 23/31 (74%), Positives = 27/31 (87%)
Query: 8 RLECSGAISAHCSLHLPGSSDSPASASQIAG 38
RLECSG ISAHC+ HL GSS+SPA AS++AG
Sbjct: 143 RLECSGKISAHCNPHLQGSSNSPAQASRVAG 173
>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
Length = 248
Score = 51.6 bits (122), Expect = 2e-06
Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 21/127 (16%)
Query: 504 QENNSGSYSVESEVYKHLSSENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKK 563
+E G + + + SS+++T + ++ K+ +K+K+ +E ++ + KRKK
Sbjct: 123 EEKKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSKDETEKEKDVRSLSKKRKK 182
Query: 564 SYED-----------TDLDKDKSIRQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEERK 612
SY D +D ++D ++++R E+R K K +KKKK K+ +K
Sbjct: 183 SYPDDKPLSSESSSESDYEEDVQAKKKRRCEER---EQAKEKVKKKKK-------KQHKK 232
Query: 613 HRKEKKK 619
H K+KKK
Sbjct: 233 HSKKKKK 239
Score = 40.4 bits (93), Expect = 0.005
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 516 EVYKHLSSENNTADHQAGHKQK-HQKRKRHLEEGKER---------PEKEQSKHKRKKSY 565
EV K L ++ + A ++K ++ K+ LE+ +E+ ++E+ K ++KKS
Sbjct: 43 EVKKQLENKKTGSKALAEFEEKMNENWKKELEKSREKLLSGNESSSKKRERKKKRKKKSC 102
Query: 566 EDTDLDKDKSIRQRKREEDRVKVSSGKLKHRKKKKSHDVP------SEKEERKHRKEKKK 619
+ + + + GK + +KK +S+ SE E ++ K+KKK
Sbjct: 103 RSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKK 162
Query: 620 SVEERTEEE 628
S +E +E+
Sbjct: 163 SKDETEKEK 171
Score = 40.4 bits (93), Expect = 0.005
Identities = 24/106 (22%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 522 SSENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKR 581
S E + +++ K++ +K+KR ++ R S S D++ ++ K ++RK+
Sbjct: 76 SREKLLSGNESSSKKRERKKKR--KKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKK 133
Query: 582 EEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEE 627
+++R SS H + +S + +K++ K EK+K V +++
Sbjct: 134 KKNRSYKSSQSSTHESESESKESVKKKKKSKDETEKEKDVRSLSKK 179
Score = 37.4 bits (85), Expect = 0.043
Identities = 26/112 (23%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 522 SSENNTADHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKSIRQRKR 581
SS+++++ + ++K Q ++R ++ + + S H+ + +++ K KS + ++
Sbjct: 110 SSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSKDETEK 169
Query: 582 EEDRVKVSSGKLKHRKKKKSHDVPSEKE-------ERKHRKEKKKSVEERTE 626
E+D +S K RKK D P E E + +KK+ EER +
Sbjct: 170 EKDVRSLS----KKRKKSYPDDKPLSSESSSESDYEEDVQAKKKRRCEEREQ 217
Score = 37.4 bits (85), Expect = 0.043
Identities = 29/121 (23%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 522 SSENNTADHQAGHKQKHQKRKRHLEEGKERPEKE----QSKHKRKKSYEDTDLDKDKSIR 577
SS++ + + G ++K +K + + E E +S K+KKS ++T+ +KD
Sbjct: 117 SSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSKDETEKEKDVRSL 176
Query: 578 QRKREE---DRVKVSSGKLKH-------RKKKKSHDVPSEKEERKHRKEKKKSVEERTEE 627
+KR++ D +SS + KKK E+ + K +K+KKK ++ +++
Sbjct: 177 SKKRKKSYPDDKPLSSESSSESDYEEDVQAKKKRRCEEREQAKEKVKKKKKKQHKKHSKK 236
Query: 628 E 628
+
Sbjct: 237 K 237
Score = 31.6 bits (70), Expect = 2.3
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 519 KHLSSENNTA-----DHQAGHKQKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKD 573
K LSSE+++ D QA K++ ++R++ E+ K++ +K+ KH +KK + K
Sbjct: 188 KPLSSESSSESDYEEDVQAKKKRRCEEREQAKEKVKKKKKKQHKKHSKKKKKKSGSSHKS 247
Query: 574 K 574
+
Sbjct: 248 R 248
>gi|28372523 intraflagellar transport protein IFT20 [Homo sapiens]
Length = 148
Score = 51.2 bits (121), Expect = 3e-06
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 1 MESCSVT-RLECSGAISAHCSLHLPGSSDSPASASQIAGTT 40
M+S +V+ RLEC+GAISAHC L L SSDSP S S++ GTT
Sbjct: 70 MKSLAVSPRLECTGAISAHCKLCLSDSSDSPTSPSRVGGTT 110
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.128 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,822,875
Number of Sequences: 37866
Number of extensions: 1247582
Number of successful extensions: 19709
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 619
Number of HSP's that attempted gapping in prelim test: 8925
Number of HSP's gapped (non-prelim): 6418
length of query: 638
length of database: 18,247,518
effective HSP length: 109
effective length of query: 529
effective length of database: 14,120,124
effective search space: 7469545596
effective search space used: 7469545596
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.