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Search of human proteins with 58331195
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|58331195 ring finger and CHY zinc finger domain containing 1
isoform 1 [Homo sapiens]
(261 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|58331195 ring finger and CHY zinc finger domain containing 1 ... 578 e-165
gi|58331199 ring finger and CHY zinc finger domain containing 1 ... 551 e-157
gi|58331197 ring finger and CHY zinc finger domain containing 1 ... 403 e-113
gi|29789407 ring finger protein 149 [Homo sapiens] 53 2e-07
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 46 3e-05
gi|153791514 tripartite motif-containing 32 [Homo sapiens] 45 8e-05
gi|153792582 tripartite motif-containing 32 [Homo sapiens] 45 8e-05
gi|58331204 ring finger protein 150 [Homo sapiens] 44 1e-04
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 43 2e-04
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 43 2e-04
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 43 2e-04
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 43 2e-04
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 43 2e-04
gi|7662486 ring finger protein 44 [Homo sapiens] 43 2e-04
gi|29788758 ring finger protein 130 [Homo sapiens] 43 2e-04
gi|21071001 autocrine motility factor receptor [Homo sapiens] 43 3e-04
gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens] 42 4e-04
gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens] 42 4e-04
gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens] 42 4e-04
gi|150378447 zinc and ring finger 3 [Homo sapiens] 42 4e-04
gi|61676102 zinc finger protein 789 isoform 1 [Homo sapiens] 42 5e-04
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 41 0.001
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 41 0.001
gi|37595553 ring finger protein 111 [Homo sapiens] 40 0.002
gi|38045931 ring finger protein 122 [Homo sapiens] 40 0.002
gi|57165361 ring finger protein 165 [Homo sapiens] 40 0.003
gi|5174653 ring finger protein 6 [Homo sapiens] 39 0.003
gi|34305295 ring finger protein 6 [Homo sapiens] 39 0.003
gi|34305293 ring finger protein 6 [Homo sapiens] 39 0.003
gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 39 0.005
>gi|58331195 ring finger and CHY zinc finger domain containing 1
isoform 1 [Homo sapiens]
Length = 261
Score = 578 bits (1489), Expect = e-165
Identities = 261/261 (100%), Positives = 261/261 (100%)
Query: 1 MAATAREDGASGQERGQRGCEHYDRGCLLKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEV 60
MAATAREDGASGQERGQRGCEHYDRGCLLKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEV
Sbjct: 1 MAATAREDGASGQERGQRGCEHYDRGCLLKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEV 60
Query: 61 QCINCEKIQHAQQTCEECSTLFGEYYCDICHLFDKDKKQYHCENCGICRIGPKEDFFHCL 120
QCINCEKIQHAQQTCEECSTLFGEYYCDICHLFDKDKKQYHCENCGICRIGPKEDFFHCL
Sbjct: 61 QCINCEKIQHAQQTCEECSTLFGEYYCDICHLFDKDKKQYHCENCGICRIGPKEDFFHCL 120
Query: 121 KCNLCLAMNLQGRHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG 180
KCNLCLAMNLQGRHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG
Sbjct: 121 KCNLCLAMNLQGRHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG 180
Query: 181 YRCPLCMHSALDMTRYWRQLDDEVAQTPMPSEYQNMTVDILCNDCNGRSTVQFHILGMKC 240
YRCPLCMHSALDMTRYWRQLDDEVAQTPMPSEYQNMTVDILCNDCNGRSTVQFHILGMKC
Sbjct: 181 YRCPLCMHSALDMTRYWRQLDDEVAQTPMPSEYQNMTVDILCNDCNGRSTVQFHILGMKC 240
Query: 241 KICESYNTAQAGGRRISLDQQ 261
KICESYNTAQAGGRRISLDQQ
Sbjct: 241 KICESYNTAQAGGRRISLDQQ 261
>gi|58331199 ring finger and CHY zinc finger domain containing 1
isoform 3 [Homo sapiens]
Length = 252
Score = 551 bits (1419), Expect = e-157
Identities = 252/261 (96%), Positives = 252/261 (96%), Gaps = 9/261 (3%)
Query: 1 MAATAREDGASGQERGQRGCEHYDRGCLLKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEV 60
MAATAREDGASGQERGQRGCEHYDRGCLLKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEV
Sbjct: 1 MAATAREDGASGQERGQRGCEHYDRGCLLKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEV 60
Query: 61 QCINCEKIQHAQQTCEECSTLFGEYYCDICHLFDKDKKQYHCENCGICRIGPKEDFFHCL 120
QCINCEKIQHAQQTCEECSTLFGEYYCDICHLFDKDKKQYHCENCGICRIGPKEDFFHCL
Sbjct: 61 QCINCEKIQHAQQTCEECSTLFGEYYCDICHLFDKDKKQYHCENCGICRIGPKEDFFHCL 120
Query: 121 KCNLCLAMNLQGRHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG 180
KCNLCLAMNLQGRHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHR G
Sbjct: 121 KCNLCLAMNLQGRHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHR---------G 171
Query: 181 YRCPLCMHSALDMTRYWRQLDDEVAQTPMPSEYQNMTVDILCNDCNGRSTVQFHILGMKC 240
YRCPLCMHSALDMTRYWRQLDDEVAQTPMPSEYQNMTVDILCNDCNGRSTVQFHILGMKC
Sbjct: 172 YRCPLCMHSALDMTRYWRQLDDEVAQTPMPSEYQNMTVDILCNDCNGRSTVQFHILGMKC 231
Query: 241 KICESYNTAQAGGRRISLDQQ 261
KICESYNTAQAGGRRISLDQQ
Sbjct: 232 KICESYNTAQAGGRRISLDQQ 252
>gi|58331197 ring finger and CHY zinc finger domain containing 1
isoform 2 [Homo sapiens]
Length = 200
Score = 403 bits (1035), Expect = e-113
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 1 MAATAREDGASGQERGQRGCEHYDRGCLLKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEV 60
MAATAREDGASGQERGQRGCEHYDRGCLLKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEV
Sbjct: 1 MAATAREDGASGQERGQRGCEHYDRGCLLKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEV 60
Query: 61 QCINCEKIQHAQQTCEECSTLFGEYYCDICHLFDKDKKQYHCENCGICRIGPKEDFFHCL 120
QCINCEKIQHAQQTCEECSTLFGEYYCDICHLFDKDKKQYHCENCGICRIGPKEDFFHCL
Sbjct: 61 QCINCEKIQHAQQTCEECSTLFGEYYCDICHLFDKDKKQYHCENCGICRIGPKEDFFHCL 120
Query: 121 KCNLCLAMNLQGRHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKE 179
KCNLCLAMNLQGRHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKE
Sbjct: 121 KCNLCLAMNLQGRHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKE 179
>gi|29789407 ring finger protein 149 [Homo sapiens]
Length = 400
Score = 53.1 bits (126), Expect = 2e-07
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 139 NVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHSALDMTRYWR 198
+V +NC +C+E+ ++ +LPC H+ HR C + L + CP+C + YW
Sbjct: 263 DVDAENCAVCIENFKVKDII-RILPCKHIFHRICIDPWLLDHRTCPMCKLDVIKALGYWG 321
Query: 199 QLDDEVAQTPMP 210
+ D V + P P
Sbjct: 322 EPGD-VQEMPAP 332
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 46.2 bits (108), Expect = 3e-05
Identities = 43/173 (24%), Positives = 65/173 (37%), Gaps = 30/173 (17%)
Query: 61 QCINCEKIQHAQQTCEECSTLFGEYYCDICHLFDKDKKQYHCENCGICRIGPKEDFFHCL 120
QC C+ Q+ +Q+ E+ L CD C K YH + + C
Sbjct: 384 QCPECKVCQNCKQSGEDSKMLV----CDTCD------KGYHTFCLQPVMKSVPTNGWKCK 433
Query: 121 KCNLCLAMNL----QGRHKCI--ENVSRQN---CPICLEDIHTS--RVVAHVLPCGHLLH 169
C +C+ Q H C+ +N +Q CP C + H + + H C +H
Sbjct: 434 NCRICIECGTRSSSQWHHNCLICDNCYQQQDNLCPFCGKCYHPELQKDMLHCNMCKRWVH 493
Query: 170 RTC-------YEEMLKEGYRCPLCMHSALDMTRYWRQLDDEVAQTPMPSEYQN 215
C + LKE Y C C H +M R Q +EV + ++Y N
Sbjct: 494 LECDKPTDHELDTQLKEEYICMYCKHLGAEMDRL--QPGEEVEIAELTTDYNN 544
Score = 36.6 bits (83), Expect = 0.023
Identities = 30/141 (21%), Positives = 49/141 (34%), Gaps = 23/141 (16%)
Query: 60 VQCINCEKIQHAQQT-----CEECSTLFGEYYCDICHLFDKDKKQYHCENCGICRIGPKE 114
++C CE A C++C + Y D L K + C+ C CR
Sbjct: 1005 LECTVCEACGKATDPGRLLLCDDCDISYHTYCLDP-PLQTVPKGGWKCKWCVWCR----- 1058
Query: 115 DFFHCLKCNLCLAMNLQGRH-KCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTC- 172
HC + L Q + +C S +CP+C + ++ C +H C
Sbjct: 1059 ---HCGATSAGLRCEWQNNYTQCAPCASLSSCPVCYRNYREEDLILQCRQCDRWMHAVCQ 1115
Query: 173 -------YEEMLKEGYRCPLC 186
E + G+ C +C
Sbjct: 1116 NLNTEEEVENVADIGFDCSMC 1136
>gi|153791514 tripartite motif-containing 32 [Homo sapiens]
Length = 653
Score = 44.7 bits (104), Expect = 8e-05
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 145 CPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLK---EGYRCPLCMHSALDMTRYWRQLD 201
CPIC+E ++ +L CGH + R C E++L G RCP C S + QL
Sbjct: 20 CPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFC--SKITRITSLTQLT 77
Query: 202 D-----EVAQTPMPSEYQNMTVDILCNDCNGRSTVQFHILGMKCKIC 243
D ++ T SE + ++C C R QF C+ C
Sbjct: 78 DNLTVLKIIDTAGLSEAVGL---LMCRSCGRRLPRQF------CRSC 115
>gi|153792582 tripartite motif-containing 32 [Homo sapiens]
Length = 653
Score = 44.7 bits (104), Expect = 8e-05
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 19/107 (17%)
Query: 145 CPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLK---EGYRCPLCMHSALDMTRYWRQLD 201
CPIC+E ++ +L CGH + R C E++L G RCP C S + QL
Sbjct: 20 CPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFC--SKITRITSLTQLT 77
Query: 202 D-----EVAQTPMPSEYQNMTVDILCNDCNGRSTVQFHILGMKCKIC 243
D ++ T SE + ++C C R QF C+ C
Sbjct: 78 DNLTVLKIIDTAGLSEAVGL---LMCRSCGRRLPRQF------CRSC 115
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 44.3 bits (103), Expect = 1e-04
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 144 NCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHSAL 191
NC +C+E + VV +LPC HL H++C + L + CP+C + L
Sbjct: 277 NCAVCIEGYKPNDVV-RILPCRHLFHKSCVDPWLLDHRTCPMCKMNIL 323
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 43.1 bits (100), Expect = 2e-04
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 145 CPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHSALDMTR 195
C +C+ D SR + VLPC H H C ++ LK CP+C A ++ R
Sbjct: 380 CVVCMCDFE-SRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHR 429
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 43.1 bits (100), Expect = 2e-04
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 145 CPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHSALDMTR 195
C +C+ D SR + VLPC H H C ++ LK CP+C A ++ R
Sbjct: 380 CVVCMCDFE-SRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHR 429
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 43.1 bits (100), Expect = 2e-04
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 145 CPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHSALDMTR 195
C +C+ D SR + VLPC H H C ++ LK CP+C A ++ R
Sbjct: 413 CVVCMCDFE-SRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHR 462
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 43.1 bits (100), Expect = 2e-04
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 145 CPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHSALDMTR 195
C +C+ D SR + VLPC H H C ++ LK CP+C A ++ R
Sbjct: 380 CVVCMCDFE-SRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHR 429
>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
Length = 515
Score = 43.1 bits (100), Expect = 2e-04
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 145 CPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHSALDMTR 195
C +C+ D SR + VLPC H H C ++ LK CP+C A ++ R
Sbjct: 463 CVVCMCDFE-SRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHR 512
>gi|7662486 ring finger protein 44 [Homo sapiens]
Length = 432
Score = 43.1 bits (100), Expect = 2e-04
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 145 CPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHSALDMTR 195
C +C D +R + VLPC H H C ++ LK CP+C A ++ R
Sbjct: 380 CVVCFSDFE-ARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADASEVPR 429
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 43.1 bits (100), Expect = 2e-04
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 144 NCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLC 186
+C +C+E + VV +LPC H+ H++C + L E CP+C
Sbjct: 263 HCAVCIESYKQNDVV-RILPCKHVFHKSCVDPWLSEHCTCPMC 304
>gi|21071001 autocrine motility factor receptor [Homo sapiens]
Length = 643
Score = 42.7 bits (99), Expect = 3e-04
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 140 VSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHS 189
V+ +C IC + + +R LPCGHL H +C L++ CP C S
Sbjct: 336 VNNDDCAICWDSMQAARK----LPCGHLFHNSCLRSWLEQDTSCPTCRMS 381
>gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens]
Length = 169
Score = 42.4 bits (98), Expect = 4e-04
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 145 CPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHSALDMTRYWRQLDDEV 204
C +CLED R + PC H HR C + L+ CPLC L + + + D
Sbjct: 99 CAVCLEDFKP-RDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLAQLHSKQDRGP 157
Query: 205 AQTPMP 210
Q P+P
Sbjct: 158 PQGPLP 163
>gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 42.4 bits (98), Expect = 4e-04
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 145 CPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHSALDMTRYWRQLDDEV 204
C +CLED R + PC H HR C + L+ CPLC L + + + D
Sbjct: 78 CAVCLEDFKP-RDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLAQLHSKQDRGP 136
Query: 205 AQTPMP 210
Q P+P
Sbjct: 137 PQGPLP 142
>gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 42.4 bits (98), Expect = 4e-04
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 145 CPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHSALDMTRYWRQLDDEV 204
C +CLED R + PC H HR C + L+ CPLC L + + + D
Sbjct: 78 CAVCLEDFKP-RDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLAQLHSKQDRGP 136
Query: 205 AQTPMP 210
Q P+P
Sbjct: 137 PQGPLP 142
>gi|150378447 zinc and ring finger 3 [Homo sapiens]
Length = 836
Score = 42.4 bits (98), Expect = 4e-04
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 137 IENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHSALD 192
+ + S +C ICLE + V+PC H HR C + L + + CP C H+ ++
Sbjct: 185 LSSSSTSDCAICLEKYIDGEEL-RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIE 239
>gi|61676102 zinc finger protein 789 isoform 1 [Homo sapiens]
Length = 425
Score = 42.0 bits (97), Expect = 5e-04
Identities = 42/153 (27%), Positives = 56/153 (36%), Gaps = 40/153 (26%)
Query: 43 CHDNNE---------DHQLDRFKVKEVQCINCEK--------IQHA-------QQTCEEC 78
CHD + +H+ K K +C CEK I+H + C EC
Sbjct: 259 CHDCGKCFRQLAYLVEHKRIHTKEKPYKCSKCEKTFSQNSTLIRHQVIHSGEKRHKCLEC 318
Query: 79 STLFGEYYCDICHLFDKDKKQYH-CENCGIC-----------RIGPKEDFFHCLKCNLCL 126
FG + +CH K H C CG RI KE+FF C +C
Sbjct: 319 GKAFGRHSTLLCHQQIHSKPNTHKCSECGQSFGRNVDLIQHQRIHTKEEFFQCGECGKTF 378
Query: 127 AMNLQ-GRHKCIENVSR-QNCPICLEDI--HTS 155
+ RH+ I S+ C IC + HTS
Sbjct: 379 SFKRNLFRHQVIHTGSQPYQCVICGKSFKWHTS 411
Score = 38.5 bits (88), Expect = 0.006
Identities = 39/165 (23%), Positives = 55/165 (33%), Gaps = 47/165 (28%)
Query: 50 HQLDRFKVKEVQCINCEKI--------QHAQQ-------TCEECSTLFGEYYC----DIC 90
H+ + K +C C K+ QH + C+ C F + C
Sbjct: 191 HERILTRAKSYECSECGKVIRRKAWFDQHQRIHFLENPFECKVCGQAFRQRSALTVHKQC 250
Query: 91 HLFDKDKKQYHCENCGIC-----------RIGPKEDFFHCLKCNLCLAMNL--------- 130
HL K Y C +CG C RI KE + C KC + N
Sbjct: 251 HL---QNKPYRCHDCGKCFRQLAYLVEHKRIHTKEKPYKCSKCEKTFSQNSTLIRHQVIH 307
Query: 131 --QGRHKCIE---NVSRQNCPICLEDIHTSRVVAHVLPCGHLLHR 170
+ RHKC+E R + +C + IH+ CG R
Sbjct: 308 SGEKRHKCLECGKAFGRHSTLLCHQQIHSKPNTHKCSECGQSFGR 352
>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
Length = 428
Score = 41.2 bits (95), Expect = 0.001
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 144 NCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHSALDMTRYWRQLDDE 203
+C +C+E ++ + +L C H+ H+TC + L E CP+C L ++D
Sbjct: 276 SCAVCIE-LYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDILKALGIEVDVEDG 334
Query: 204 VA--QTPMPSEYQN 215
Q P+ +E N
Sbjct: 335 SVSLQVPVSNEISN 348
>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
Length = 402
Score = 41.2 bits (95), Expect = 0.001
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 144 NCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHSALDMTRYWRQLDDE 203
+C +C+E ++ + +L C H+ H+TC + L E CP+C L ++D
Sbjct: 250 SCAVCIE-LYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDILKALGIEVDVEDG 308
Query: 204 VA--QTPMPSEYQN 215
Q P+ +E N
Sbjct: 309 SVSLQVPVSNEISN 322
>gi|37595553 ring finger protein 111 [Homo sapiens]
Length = 986
Score = 40.0 bits (92), Expect = 0.002
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 138 ENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLC 186
E + + C ICL + V LPC HL H+ C ++ L +CP+C
Sbjct: 927 EEDTEEKCTICLSILEEGEDVRR-LPCMHLFHQVCVDQWLITNKKCPIC 974
>gi|38045931 ring finger protein 122 [Homo sapiens]
Length = 155
Score = 40.0 bits (92), Expect = 0.002
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 143 QNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLC 186
Q C +CLED + VLPC H HR C + L+ CP+C
Sbjct: 91 QTCAVCLEDFKGKDELG-VLPCQHAFHRKCLVKWLEVRCVCPMC 133
>gi|57165361 ring finger protein 165 [Homo sapiens]
Length = 346
Score = 39.7 bits (91), Expect = 0.003
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 138 ENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLC 186
E+ + + C ICL + V LPC HL H+ C ++ L +CP+C
Sbjct: 287 ESDTDEKCTICLSMLEDGEDVRR-LPCMHLFHQLCVDQWLAMSKKCPIC 334
>gi|5174653 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 39.3 bits (90), Expect = 0.003
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 134 HKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHSAL 191
H I++ + C +C+ D T + LPC H H C + L E CP+C L
Sbjct: 621 HNSIDSELGKICSVCISDYVTGNKLRQ-LPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|34305295 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 39.3 bits (90), Expect = 0.003
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 134 HKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHSAL 191
H I++ + C +C+ D T + LPC H H C + L E CP+C L
Sbjct: 621 HNSIDSELGKICSVCISDYVTGNKLRQ-LPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|34305293 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 39.3 bits (90), Expect = 0.003
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 134 HKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHSAL 191
H I++ + C +C+ D T + LPC H H C + L E CP+C L
Sbjct: 621 HNSIDSELGKICSVCISDYVTGNKLRQ-LPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|34452686 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 38.9 bits (89), Expect = 0.005
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 138 ENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHSAL 191
EN + + C +C+ + +T LPC H H C + L E CP+C + L
Sbjct: 563 ENDALKTCSVCITE-YTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 615
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.139 0.472
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,716,688
Number of Sequences: 37866
Number of extensions: 596063
Number of successful extensions: 3596
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 320
Number of HSP's that attempted gapping in prelim test: 2770
Number of HSP's gapped (non-prelim): 1120
length of query: 261
length of database: 18,247,518
effective HSP length: 100
effective length of query: 161
effective length of database: 14,460,918
effective search space: 2328207798
effective search space used: 2328207798
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.