Guide to the Human Genome
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Name: RCHY1 Sequence: fasta or formatted (200aa) NCBI GI: 58331197
Description:

ring finger and CHY zinc finger domain containing 1 isoform 2

Referenced in:

Ring Finger Proteins

Other entries for this name:
alt prot [261aa] ring finger and CHY zinc finger domain containing 1 isoform 1
alt prot [252aa] ring finger and CHY zinc finger domain containing 1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         10           2
 C cysteine           12.0         24           2
 D aspartate           6.0         12           1
 E glutamate           8.5         17           2
 F phenylalanine       3.0          6           2
 G glycine             5.5         11           1
 H histidine           6.0         12           1
 I isoleucine          4.5          9           1
 K lysine              6.0         12           2
 L leucine             9.5         19           2
 M methionine          2.5          5           1
 N asparagine          4.0          8           2
 P proline             2.0          4           1
 Q glutamine           6.0         12           2
 R arginine            6.0         12           1
 S serine              2.5          5           1
 T threonine           3.5          7           1
 V valine              3.5          7           2
 W tryptophan          0.0          0           0
 Y tyrosine            4.0          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger and CHY zinc finger domain containing 1 ... 
RCHY1                 0.902   ring finger and CHY zinc finger domain containing 1 ...
RCHY1                 0.857   ring finger and CHY zinc finger domain containing 1 ...
ZNF789                0.041   zinc finger protein 789 isoform 1 
RNF149                0.031   ring finger protein 149 
OSR2                  0.031   odd-skipped related 2 isoform a 
RNF150                0.026   ring finger protein 150 
TRIM32                0.024   tripartite motif-containing 32 
TRIM32                0.024   tripartite motif-containing 32 
ZNF808                0.024   zinc finger protein 808 
ZNF799                0.024   zinc finger protein 799 
ZNF528                0.024   zinc finger protein 528 
ZNF737                0.024   zinc finger protein 737 
ZNF737                0.024   PREDICTED: zinc finger protein 737 
ZNF737                0.024   PREDICTED: zinc finger protein 737 
ZNF737                0.024   PREDICTED: zinc finger protein 737 
AMFR                  0.024   autocrine motility factor receptor 
RNF130                0.024   ring finger protein 130 
BCL6                  0.021   B-cell lymphoma 6 protein isoform 2 
RNF122                0.021   ring finger protein 122 
ZNF675                0.021   zinc finger protein 675 
MLL3                  0.021   myeloid/lymphoid or mixed-lineage leukemia 3 
ZNF765                0.021   zinc finger protein 765 
ZNF529                0.019   zinc finger protein 529 isoform b 
ZNF529                0.019   zinc finger protein 529 isoform a 
ZNF529                0.019   zinc finger protein 529 isoform a 
LAMA1                 0.019   laminin, alpha 1 precursor 
ZNF91                 0.019   zinc finger protein 91 
LRP12                 0.019   low density lipoprotein-related protein 12 isoform ...
LRP12                 0.019   low density lipoprotein-related protein 12 isoform a ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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