Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 58331161
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|58331161 PHD finger protein 19 isoform a [Homo sapiens]
(580 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|58331161 PHD finger protein 19 isoform a [Homo sapiens] 1211 0.0
gi|6678764 metal response element binding transcription factor 2... 489 e-138
gi|13435397 PHD finger protein 1 isoform b [Homo sapiens] 402 e-112
gi|4505777 PHD finger protein 1 isoform a [Homo sapiens] 380 e-105
gi|58331163 PHD finger protein 19 isoform b [Homo sapiens] 334 2e-91
gi|24308203 CSRP2 binding protein isoform a [Homo sapiens] 60 5e-09
gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens] 47 5e-05
gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens] 47 5e-05
gi|51173722 bromodomain and PHD finger-containing protein 1 isof... 44 3e-04
gi|51173720 bromodomain and PHD finger-containing protein 1 isof... 44 3e-04
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 42 0.001
gi|11321642 bromodomain containing protein 1 [Homo sapiens] 42 0.001
gi|117190334 PHD finger protein 16 [Homo sapiens] 42 0.002
gi|7662006 PHD finger protein 16 [Homo sapiens] 42 0.002
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 41 0.003
gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithora... 41 0.003
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 40 0.005
gi|148727368 bromodomain and PHD finger containing, 3 [Homo sapi... 40 0.006
gi|195976782 Paf1/RNA polymerase II complex component [Homo sapi... 40 0.008
gi|19923609 PHD finger protein 17 short isoform [Homo sapiens] 40 0.008
gi|40556393 PHD finger protein 17 long isoform [Homo sapiens] 40 0.008
gi|45580730 aminoadipate-semialdehyde dehydrogenase [Homo sapiens] 40 0.008
gi|40556370 PHD finger protein 15 [Homo sapiens] 40 0.008
gi|190343010 SP110 nuclear body protein isoform a [Homo sapiens] 37 0.038
gi|190343006 SP110 nuclear body protein isoform c [Homo sapiens] 37 0.038
gi|57546899 myeloid/lymphoid or mixed-lineage leukemia transloca... 37 0.050
gi|4757726 myeloid/lymphoid or mixed-lineage leukemia translocat... 37 0.050
gi|5454004 D4, zinc and double PHD fingers family 2 [Homo sapiens] 37 0.050
gi|215599585 integrator complex subunit 12 [Homo sapiens] 36 0.085
gi|21361851 integrator complex subunit 12 [Homo sapiens] 36 0.085
>gi|58331161 PHD finger protein 19 isoform a [Homo sapiens]
Length = 580
Score = 1211 bits (3133), Expect = 0.0
Identities = 580/580 (100%), Positives = 580/580 (100%)
Query: 1 MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLTEGQYVLCRWTDGLYYLGKI 60
MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLTEGQYVLCRWTDGLYYLGKI
Sbjct: 1 MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLTEGQYVLCRWTDGLYYLGKI 60
Query: 61 KRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNICLGKTSGPLNEILICGKCG 120
KRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNICLGKTSGPLNEILICGKCG
Sbjct: 61 KRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNICLGKTSGPLNEILICGKCG 120
Query: 121 LGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALKKGAIARTLQAVKMVLSYQP 180
LGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALKKGAIARTLQAVKMVLSYQP
Sbjct: 121 LGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGGALKKGAIARTLQAVKMVLSYQP 180
Query: 181 EELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFHEACTQCLNEPMMFGDRFYL 240
EELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFHEACTQCLNEPMMFGDRFYL
Sbjct: 181 EELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQWFHEACTQCLNEPMMFGDRFYL 240
Query: 241 FFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFDFEEILAFVNHHWELLQLGK 300
FFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFDFEEILAFVNHHWELLQLGK
Sbjct: 241 FFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKKYFDFEEILAFVNHHWELLQLGK 300
Query: 301 LTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRIRVPPNPPGKLLPDKGLLPN 360
LTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRIRVPPNPPGKLLPDKGLLPN
Sbjct: 301 LTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIFRLRIRVPPNPPGKLLPDKGLLPN 360
Query: 361 ENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLEDAIPSSDFTSAWSTNHHLA 420
ENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLEDAIPSSDFTSAWSTNHHLA
Sbjct: 361 ENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRKRSKFLLEDAIPSSDFTSAWSTNHHLA 420
Query: 421 SIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGSASTSLSYDSRWTVGSRKRKLAAK 480
SIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGSASTSLSYDSRWTVGSRKRKLAAK
Sbjct: 421 SIFDFTLDEIQSLKSASSGQTFFSDVDSTDAASTSGSASTSLSYDSRWTVGSRKRKLAAK 480
Query: 481 AYMPLRAKRWAAELDGRCPSDSSAEGASVPERPDEGIDSHTFESISEDDSSLSHLKSSIT 540
AYMPLRAKRWAAELDGRCPSDSSAEGASVPERPDEGIDSHTFESISEDDSSLSHLKSSIT
Sbjct: 481 AYMPLRAKRWAAELDGRCPSDSSAEGASVPERPDEGIDSHTFESISEDDSSLSHLKSSIT 540
Query: 541 NYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTTPY 580
NYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTTPY
Sbjct: 541 NYFGAAGRLACGEKYQVLARRVTPEGKVQYLVEWEGTTPY 580
>gi|6678764 metal response element binding transcription factor 2
[Homo sapiens]
Length = 593
Score = 489 bits (1260), Expect = e-138
Identities = 265/562 (47%), Positives = 346/562 (61%), Gaps = 37/562 (6%)
Query: 39 KLTEGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPK 98
K EGQ VL RW+DGL+YLG IK+++ KQSC + FED+SK WVLWKDIQ E
Sbjct: 45 KFEEGQDVLARWSDGLFYLGTIKKINILKQSCFIIFEDSSKSWVLWKDIQTGATGSGEMV 104
Query: 99 CNICLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGG 158
C IC + S NE++IC KCG GYHQ CH P S+ W CR+C+FA ++GG
Sbjct: 105 CTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKRGG 164
Query: 159 ALKKGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQ 218
ALKKG A+ LQ +K L Y +LEWD+ H+TN QQCYCYCGGPG+WYL+MLQC +C+Q
Sbjct: 165 ALKKGPNAKALQVMKQTLPYSVADLEWDAGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQ 224
Query: 219 WFHEACTQCLNEPMMFGDRFYLFFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKK 278
WFHEAC QCL +PM+FGDRFY F CSVC+ GPEY++RLPL+WVD+ HL LYNL V KKK
Sbjct: 225 WFHEACVQCLQKPMLFGDRFYTFICSVCSSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKK 284
Query: 279 YFDFE-EILAFVNHHWELLQLGKLTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIF 337
YFD E E++ ++N +W+ L G+L TP ++R H+L ALN YK+ F+ GKEIKKKK +F
Sbjct: 285 YFDSELELMTYINENWDRLHPGELADTPKSERYEHVLEALNDYKTMFMSGKEIKKKKHLF 344
Query: 338 RLRIRVPPNPPGKLLPDKGLLPNENSASSELRKRGKSKPGLLPHEFQQQKRRVYRRK--- 394
LRIRVPP PP + P S +++ R SKP E + ++K
Sbjct: 345 GLRIRVPPVPPNVAFKAE-KEPEGTSHEFKIKGRKASKPISDSREVSNGIEKKGKKKSVG 403
Query: 395 ------RSKFLLEDAIPSSDFTSAWSTNHHLASIFDFTLDEIQSLKSASSGQTFFSDVDS 448
K + + A P D S S N L D ++ +A S T SDVD
Sbjct: 404 RPPGPYTRKMIQKTAEPLLDKESI-SENPTL----DLPCSIGRTEGTAHSSNT--SDVDF 456
Query: 449 TDAASTSGSASTSLSYDSRWTVGSRKRKLAAKAYMP----LRAKRWAAELDGRCPSDSSA 504
T A+S + S+S+S + SRKR +++ LR +R GR P +
Sbjct: 457 TGASSAKETTSSSISRHYGLS-DSRKRTRTGRSWPAAIPHLRRRR------GRLPRRALQ 509
Query: 505 EGASVPERPDEGIDSHTFE--------SISEDDSSLSHLKSSITNYFGAAGRLACGEKYQ 556
S + DEG + + F+ ++++ + L+HLK+SIT+YFGAAGR+ACGEKY+
Sbjct: 510 TQNSEIVKDDEGKEDYQFDELNTEILNNLADQELQLNHLKNSITSYFGAAGRIACGEKYR 569
Query: 557 VLARRVTPEGKVQYLVEWEGTT 578
VLARRVT +GKVQYLVEWEG T
Sbjct: 570 VLARRVTLDGKVQYLVEWEGAT 591
>gi|13435397 PHD finger protein 1 isoform b [Homo sapiens]
Length = 567
Score = 402 bits (1033), Expect = e-112
Identities = 234/559 (41%), Positives = 315/559 (56%), Gaps = 46/559 (8%)
Query: 39 KLTEGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPK 98
+L EGQ VL RWTDGL YLG IK+V S+++ CLV FED+S++ VLWKDI A +PGEE
Sbjct: 30 RLWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDDSQFLVLWKDISPAALPGEELL 89
Query: 99 CNICLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGG 158
C +C +T P N ++ C KC YHQ CH+P A + + T W CR+C+FA+A ++GG
Sbjct: 90 CCVCRSETVVPGNRLVSCEKCRHAYHQDCHVPRAPAPGEGEGTSWVCRQCVFAIATKRGG 149
Query: 159 ALKKGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQ 218
ALKKG AR + +K+ L Y + L+WD+ H +N+QQ YCYCGGPGEW L+MLQC C Q
Sbjct: 150 ALKKGPYARAMLGMKLSLPYGLKGLDWDAGHLSNRQQSYCYCGGPGEWNLKMLQCRSCLQ 209
Query: 219 WFHEACTQCLNEPMMFGDRFYLFFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKK 278
WFHEACTQCL++P+++GDRFY F C VC GPE + RL LRWVDV HL LY+L V KKK
Sbjct: 210 WFHEACTQCLSKPLLYGDRFYEFECCVCRGGPEKVRRLQLRWVDVAHLVLYHLSVCCKKK 269
Query: 279 YFDFE-EILAFVNHHWELLQLGKLTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIF 337
YFDF+ EIL F + +W+ L LG+L+ TP +R LL+ALNS+K RF+ G+EIKK+KC+F
Sbjct: 270 YFDFDREILPFTSENWDSLLLGELSDTPKGERSSKLLSALNSHKDRFISGREIKKRKCLF 329
Query: 338 RLRIRVPP--NPP---GKLLP-----------DKGLLPNENSASSELRKRGKSKPGLLPH 381
L R+PP PP G L + L LR+R K K L
Sbjct: 330 GLHARMPPPVEPPTGDGALTSFPSGQGPGGGVSRPLGKRRRPEPEPLRRRQKGKVEELGP 389
Query: 382 EFQQQKRRVYRRKRSKFLLEDAIPSSDFTSAWSTN--HHLASIFDFTLDEIQSLKSASSG 439
+ + + +R + L+ A+ +S + S N + +S ++F + + L S S
Sbjct: 390 PSAVRNQPEPQEQRERAHLQRALQASVSPPSPSPNQSYQGSSGYNFRPTDARCLPS-SPI 448
Query: 440 QTFFSDVDSTDAASTSGSASTSLSYDSRWTVGSRKRKLAAKAYMPLRAKRWAAELDGRCP 499
+ F S S A TSG + +G + ++ P
Sbjct: 449 RMFASFHPSASTAGTSGDSGPPDRSPLELHIG------------------FPTDIPKSAP 490
Query: 500 SDSSAEGASVPERPDEGIDSHTFESISEDDSSLSHLKSSIT--NYFGAAGRLACGEKYQV 557
+A +SV P G+ S S L S T G G L+ G+ +V
Sbjct: 491 HSMTASSSSV-SSPSPGLPRR-----SAPPSPLCRSLSPGTGGGVRGGVGYLSRGDPVRV 544
Query: 558 LARRVTPEGKVQYLVEWEG 576
LARRV P+G VQYLVEW G
Sbjct: 545 LARRVRPDGSVQYLVEWGG 563
>gi|4505777 PHD finger protein 1 isoform a [Homo sapiens]
Length = 457
Score = 380 bits (977), Expect = e-105
Identities = 181/351 (51%), Positives = 236/351 (67%), Gaps = 15/351 (4%)
Query: 39 KLTEGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPK 98
+L EGQ VL RWTDGL YLG IK+V S+++ CLV FED+S++ VLWKDI A +PGEE
Sbjct: 30 RLWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDDSQFLVLWKDISPAALPGEELL 89
Query: 99 CNICLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGG 158
C +C +T P N ++ C KC YHQ CH+P A + + T W CR+C+FA+A ++GG
Sbjct: 90 CCVCRSETVVPGNRLVSCEKCRHAYHQDCHVPRAPAPGEGEGTSWVCRQCVFAIATKRGG 149
Query: 159 ALKKGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQ 218
ALKKG AR + +K+ L Y + L+WD+ H +N+QQ YCYCGGPGEW L+MLQC C Q
Sbjct: 150 ALKKGPYARAMLGMKLSLPYGLKGLDWDAGHLSNRQQSYCYCGGPGEWNLKMLQCRSCLQ 209
Query: 219 WFHEACTQCLNEPMMFGDRFYLFFCSVCNQGPEYIERLPLRWVDVVHLALYNLGVQSKKK 278
WFHEACTQCL++P+++GDRFY F C VC GPE + RL LRWVDV HL LY+L V KKK
Sbjct: 210 WFHEACTQCLSKPLLYGDRFYEFECCVCRGGPEKVRRLQLRWVDVAHLVLYHLSVCCKKK 269
Query: 279 YFDFE-EILAFVNHHWELLQLGKLTSTPVTDRGPHLLNALNSYKSRFLCGKEIKKKKCIF 337
YFDF+ EIL F + +W+ L LG+L+ TP +R LL+ALNS+K RF+ G+EIKK+KC+F
Sbjct: 270 YFDFDREILPFTSENWDSLLLGELSDTPKGERSSKLLSALNSHKDRFISGREIKKRKCLF 329
Query: 338 RLRIRVPP--------------NPPGKLLPDKGLLPNENSASSELRKRGKS 374
L R+PP P G+ L G P + + E G+S
Sbjct: 330 GLHARMPPPVEPPTGDGALTRAGPWGRGLTSPGEAPEAGARAPEEEAEGES 380
>gi|58331163 PHD finger protein 19 isoform b [Homo sapiens]
Length = 207
Score = 334 bits (856), Expect = 2e-91
Identities = 155/155 (100%), Positives = 155/155 (100%)
Query: 1 MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLTEGQYVLCRWTDGLYYLGKI 60
MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLTEGQYVLCRWTDGLYYLGKI
Sbjct: 1 MENRALDPGTRDSYGATSHLPNKGALAKVKNNFKDLMSKLTEGQYVLCRWTDGLYYLGKI 60
Query: 61 KRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNICLGKTSGPLNEILICGKCG 120
KRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNICLGKTSGPLNEILICGKCG
Sbjct: 61 KRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNICLGKTSGPLNEILICGKCG 120
Query: 121 LGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVR 155
LGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVR
Sbjct: 121 LGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVR 155
>gi|24308203 CSRP2 binding protein isoform a [Homo sapiens]
Length = 782
Score = 60.1 bits (144), Expect = 5e-09
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 10/99 (10%)
Query: 213 CYRCRQWFHEACTQCLNEPMMF--GDRFYLFFCSVCN-QGPEYIERLPLRWVDVVHLALY 269
C +C++W + L E + + GD F+ F CS C+ G E ERL L W VV LA+Y
Sbjct: 77 CDKCQKWIPASQ---LREQLSYLKGDNFFRFTCSDCSADGKEQYERLKLTWQQVVMLAMY 133
Query: 270 NLGVQ--SKKKYFDF-EEILAFVNHHWE-LLQLGKLTST 304
NL ++ ++ YF + E+I AF+ HW LL K TST
Sbjct: 134 NLSLEGSGRQGYFRWKEDICAFIEKHWTFLLGNRKKTST 172
>gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]
Length = 888
Score = 47.0 bits (110), Expect = 5e-05
Identities = 53/213 (24%), Positives = 83/213 (38%), Gaps = 40/213 (18%)
Query: 99 CNICLGKTSGPLNEILICGKCGLGYHQQCH------IPIAGSADQPLLTPWFCRRC---- 148
C +CLG S +EI+ C CG+ H+ C+ I SA + PWFC C
Sbjct: 322 CCVCLGDNSEDADEIIQCDNCGITVHEGCYGVDGESDSIMSSASENSTEPWFCDACKCGV 381
Query: 149 --IFALAVRKGGALKKGAIARTLQAVKMVL----------SYQPEELEWDSPHRTNQQQC 196
L + G K+ R + V + +P L + + ++C
Sbjct: 382 SPSCELCPNQDGIFKETDAGRWVHIVCALYVPGVAFGDIDKLRPVTLTEMNYSKYGAKEC 441
Query: 197 YCYCGGPGEWYLRMLQCY-----RCRQWFHEACTQ---CLNEPMMFGDRFYLFFCSVCNQ 248
+C P + R C CR +FH C Q L+E D FF + C Q
Sbjct: 442 -SFCEDPR--FARTGVCISCDAGMCRAYFHVTCAQKEGLLSEAAAEEDIADPFF-AYCKQ 497
Query: 249 GPEYIERLPLRWVDVVHLALYN---LGVQSKKK 278
+ +RL +W +LAL + + +Q ++K
Sbjct: 498 ---HADRLDRKWKRKNYLALQSYCKMSLQEREK 527
>gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens]
Length = 948
Score = 47.0 bits (110), Expect = 5e-05
Identities = 53/213 (24%), Positives = 83/213 (38%), Gaps = 40/213 (18%)
Query: 99 CNICLGKTSGPLNEILICGKCGLGYHQQCH------IPIAGSADQPLLTPWFCRRC---- 148
C +CLG S +EI+ C CG+ H+ C+ I SA + PWFC C
Sbjct: 322 CCVCLGDNSEDADEIIQCDNCGITVHEGCYGVDGESDSIMSSASENSTEPWFCDACKCGV 381
Query: 149 --IFALAVRKGGALKKGAIARTLQAVKMVL----------SYQPEELEWDSPHRTNQQQC 196
L + G K+ R + V + +P L + + ++C
Sbjct: 382 SPSCELCPNQDGIFKETDAGRWVHIVCALYVPGVAFGDIDKLRPVTLTEMNYSKYGAKEC 441
Query: 197 YCYCGGPGEWYLRMLQCY-----RCRQWFHEACTQ---CLNEPMMFGDRFYLFFCSVCNQ 248
+C P + R C CR +FH C Q L+E D FF + C Q
Sbjct: 442 -SFCEDPR--FARTGVCISCDAGMCRAYFHVTCAQKEGLLSEAAAEEDIADPFF-AYCKQ 497
Query: 249 GPEYIERLPLRWVDVVHLALYN---LGVQSKKK 278
+ +RL +W +LAL + + +Q ++K
Sbjct: 498 ---HADRLDRKWKRKNYLALQSYCKMSLQEREK 527
>gi|51173722 bromodomain and PHD finger-containing protein 1 isoform
2 [Homo sapiens]
Length = 1214
Score = 44.3 bits (103), Expect = 3e-04
Identities = 46/174 (26%), Positives = 63/174 (36%), Gaps = 27/174 (15%)
Query: 95 EEPKCNICLGKTSGPLNEILICGKCGLGYHQQCH-IPIAGSADQPLLTPWFCRRCI---- 149
E+ C IC N IL C C L HQ+C+ +P W CRRC+
Sbjct: 272 EDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQ------WLCRRCLQSPS 325
Query: 150 ----FALAVRKGGALKKGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQCYCYCGGPGE 205
AL KGGA K+ R V + + PE ++ P
Sbjct: 326 RAVDCALCPNKGGAFKQTDDGRWAHVVCAL--WIPEVCFANTVFLEPIDSIEHI--PPAR 381
Query: 206 WYLRMLQCYRCRQWFHEACTQCLNEPMMFGDRFYLFFCSVCNQGPEYIERLPLR 259
W L CY C+Q AC QC + + F + Q Y++ P+R
Sbjct: 382 W---KLTCYICKQRGSGACIQCHK-----ANCYTAFHVTCAQQAGLYMKMEPVR 427
>gi|51173720 bromodomain and PHD finger-containing protein 1 isoform
1 [Homo sapiens]
Length = 1220
Score = 44.3 bits (103), Expect = 3e-04
Identities = 46/174 (26%), Positives = 63/174 (36%), Gaps = 27/174 (15%)
Query: 95 EEPKCNICLGKTSGPLNEILICGKCGLGYHQQCH-IPIAGSADQPLLTPWFCRRCI---- 149
E+ C IC N IL C C L HQ+C+ +P W CRRC+
Sbjct: 272 EDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQ------WLCRRCLQSPS 325
Query: 150 ----FALAVRKGGALKKGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQCYCYCGGPGE 205
AL KGGA K+ R V + + PE ++ P
Sbjct: 326 RAVDCALCPNKGGAFKQTDDGRWAHVVCAL--WIPEVCFANTVFLEPIDSIEHI--PPAR 381
Query: 206 WYLRMLQCYRCRQWFHEACTQCLNEPMMFGDRFYLFFCSVCNQGPEYIERLPLR 259
W L CY C+Q AC QC + + F + Q Y++ P+R
Sbjct: 382 W---KLTCYICKQRGSGACIQCHK-----ANCYTAFHVTCAQQAGLYMKMEPVR 427
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 42.4 bits (98), Expect = 0.001
Identities = 42/165 (25%), Positives = 57/165 (34%), Gaps = 50/165 (30%)
Query: 98 KCNIC--LGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTP----WFCRRCIFA 151
+C +C GK + P +L+C C + YH C D PL T W C+ C++
Sbjct: 1006 ECTVCEACGKATDP-GRLLLCDDCDISYHTYC-------LDPPLQTVPKGGWKCKWCVWC 1057
Query: 152 LAVRKGGALKKGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQC----------YCYCG 201
R GA G EW + N QC CY
Sbjct: 1058 ---RHCGATSAGL-----------------RCEWQN----NYTQCAPCASLSSCPVCYRN 1093
Query: 202 GPGEWYLRMLQCYRCRQWFHEACTQCLNEPMMFGDRFYLFFCSVC 246
E + LQC +C +W H C E + F CS+C
Sbjct: 1094 YREEDLI--LQCRQCDRWMHAVCQNLNTEEEVENVADIGFDCSMC 1136
Score = 41.6 bits (96), Expect = 0.002
Identities = 32/131 (24%), Positives = 49/131 (37%), Gaps = 23/131 (17%)
Query: 97 PKCNICLG-KTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVR 155
P+C +C K SG +++L+C C GYH C P+ S W C+ C +
Sbjct: 386 PECKVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVP---TNGWKCKNCRICIEC- 441
Query: 156 KGGALKKGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQC-YC-YCGGPGEWYLRMLQC 213
+ + L D+ ++ C +C C P E ML C
Sbjct: 442 ---------------GTRSSSQWHHNCLICDNCYQQQDNLCPFCGKCYHP-ELQKDMLHC 485
Query: 214 YRCRQWFHEAC 224
C++W H C
Sbjct: 486 NMCKRWVHLEC 496
Score = 32.7 bits (73), Expect = 0.94
Identities = 38/161 (23%), Positives = 55/161 (34%), Gaps = 12/161 (7%)
Query: 73 TFEDNSKYWVLWKDI--QHAGVPGEEPKCNICLGKTSGPLNEILICGKCGLGYHQQCHIP 130
TF+D S ++L + Q E+ C +C + G L + C CG YH C
Sbjct: 316 TFQDFSHIFLLCPEHIDQAPERSKEDANCAVC--DSPGDLLDQFFCTTCGQHYHGMC--- 370
Query: 131 IAGSADQPL-LTPWFCRRCIFALAVRKGGALKKGAIARTLQAVKMVLSYQP--EELEWDS 187
A PL W C C ++ G K + T QP + + +
Sbjct: 371 -LDIAVTPLKRAGWQCPECKVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNG 429
Query: 188 PHRTNQQQCY-CYCGGPGEWYLRMLQCYRCRQWFHEACTQC 227
N + C C +W+ L C C Q C C
Sbjct: 430 WKCKNCRICIECGTRSSSQWHHNCLICDNCYQQQDNLCPFC 470
>gi|11321642 bromodomain containing protein 1 [Homo sapiens]
Length = 1058
Score = 42.4 bits (98), Expect = 0.001
Identities = 40/152 (26%), Positives = 54/152 (35%), Gaps = 42/152 (27%)
Query: 95 EEPKCNICLGKTSGPLNEILICGKCGLGYHQQCH-IPIAGSADQPLLTPWFCRRCI---- 149
E+ C IC+ N IL C C L HQ+C+ +P W CR C+
Sbjct: 213 EDAVCCICMDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQ------WLCRHCLQSRA 266
Query: 150 ----FALAVRKGGALKK------GAIARTLQAVKM----VLSYQPEELEWDSPHRTNQQQ 195
L KGGA KK G + L ++ + +P + + P
Sbjct: 267 RPADCVLCPNKGGAFKKTDDDRWGHVVCALWIPEVGFANTVFIEPIDGVRNIP------- 319
Query: 196 CYCYCGGPGEWYLRMLQCYRCRQWFHEACTQC 227
P W L CY C+Q AC QC
Sbjct: 320 -------PARW---KLTCYLCKQKGVGACIQC 341
>gi|117190334 PHD finger protein 16 [Homo sapiens]
Length = 823
Score = 41.6 bits (96), Expect = 0.002
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 95 EEPKCNICLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIF---- 150
E+ C++C S N+++ C KC + HQ C+ G P W CR C+
Sbjct: 199 EDVICDVCRSPDSEEGNDMVFCDKCNVCVHQACY----GILKVP-EGSWLCRSCVLGIYP 253
Query: 151 --ALAVRKGGALK 161
L +KGGALK
Sbjct: 254 QCVLCPKKGGALK 266
>gi|7662006 PHD finger protein 16 [Homo sapiens]
Length = 823
Score = 41.6 bits (96), Expect = 0.002
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 95 EEPKCNICLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIF---- 150
E+ C++C S N+++ C KC + HQ C+ G P W CR C+
Sbjct: 199 EDVICDVCRSPDSEEGNDMVFCDKCNVCVHQACY----GILKVP-EGSWLCRSCVLGIYP 253
Query: 151 --ALAVRKGGALK 161
L +KGGALK
Sbjct: 254 QCVLCPKKGGALK 266
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 41.2 bits (95), Expect = 0.003
Identities = 35/141 (24%), Positives = 50/141 (35%), Gaps = 39/141 (27%)
Query: 99 CNICLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTP----WFCRRCIFALAV 154
C +C G+ S P + +L+C C + YH C D PLLT W C+ C+ +
Sbjct: 1430 CEVC-GQASDP-SRLLLCDDCDISYHTYC-------LDPPLLTVPKGGWKCKWCVSCMQC 1480
Query: 155 RKGGALKKGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQCYCY-----CGGPGEWYLR 209
GA G EW + + T+ C C P
Sbjct: 1481 ---GAASPGF-----------------HCEWQNSY-THCGPCASLVTCPICHAPYVEEDL 1519
Query: 210 MLQCYRCRQWFHEACTQCLNE 230
++QC C +W H C E
Sbjct: 1520 LIQCRHCERWMHAGCESLFTE 1540
Score = 40.4 bits (93), Expect = 0.005
Identities = 36/133 (27%), Positives = 50/133 (37%), Gaps = 15/133 (11%)
Query: 95 EEPKCNICLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAV 154
EE +C +C G G L ++ C CG YH C + A +A + W C C A
Sbjct: 225 EEARCAVCEGP--GELCDLFFCTSCGHHYHGAC-LDTALTARK--RAGWQCPECKVCQAC 279
Query: 155 RKGGALKKGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQC-YCYCGGPG--------E 205
RK G K + T +P +E H + C C G G E
Sbjct: 280 RKPGNDSKMLVCETCDKGYHTFCLKP-PMEELPAHSWKCKACRVCRACGAGSAELNPNSE 338
Query: 206 WYLRMLQCYRCRQ 218
W+ C+RC +
Sbjct: 339 WFENYSLCHRCHK 351
>gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 6 [Homo sapiens]
Length = 1093
Score = 41.2 bits (95), Expect = 0.003
Identities = 48/177 (27%), Positives = 68/177 (38%), Gaps = 39/177 (22%)
Query: 99 CNICLGKTSGPLNEILICG--KCGLGYHQQCHIPIAGSADQPLLTPWFCRRC-------- 148
C +C + N ++ C C + HQ C+ G P PWFCR+C
Sbjct: 8 CCVCSDERGWAENPLVYCDGHACSVAVHQACY----GIVQVPT-GPWFCRKCESQERAAR 62
Query: 149 -IFALAVRKGGALKK---GAIARTLQAVKM-------VLSYQPEELEWDSPHRTNQQQCY 197
L K GALK+ G A + A+ + VL+ +P L++ PH + CY
Sbjct: 63 VRCELCPHKDGALKRTDNGGWAHVVCALYIPEVQFANVLTMEPIVLQY-VPHDRFNKTCY 121
Query: 198 CYCGGPGEWYL----RMLQCYR--CRQWFHEACTQ-----CLNEPMMFGDRFYLFFC 243
C G + C R CRQ FH C Q C E + + Y +C
Sbjct: 122 -ICEEQGRESKAASGACMTCNRHGCRQAFHVTCAQMAGLLCEEEVLEVDNVKYCGYC 177
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 40.4 bits (93), Expect = 0.005
Identities = 28/132 (21%), Positives = 50/132 (37%), Gaps = 8/132 (6%)
Query: 99 CNICLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFALAVRKGG 158
C++C G+ ++L C KC YH +C P + W C +C+ + G
Sbjct: 1482 CHVC-GRQHQATKQLLECNKCRNSYHPECLGPNYPTKPTKKKKVWICTKCV---RCKSCG 1537
Query: 159 ALKKGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCRQ 218
+ G + L + +L +CY ++ +M+QC +C +
Sbjct: 1538 STTPGKGWDAQWSHDFSLCHDCAKLFAKGNFCPLCDKCY----DDDDYESKMMQCGKCDR 1593
Query: 219 WFHEACTQCLNE 230
W H C +E
Sbjct: 1594 WVHSKCENLSDE 1605
Score = 32.3 bits (72), Expect = 1.2
Identities = 38/174 (21%), Positives = 61/174 (35%), Gaps = 39/174 (22%)
Query: 101 ICLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPL---LTPWFCRRCIFALAVRKG 157
+C S E + C C +H+ C ++PL L W CRRC F +
Sbjct: 1433 VCFLCASSGHVEFVYCQVCCEPFHKFC----LEENERPLEDQLENWCCRRCKFCHVCGR- 1487
Query: 158 GALKKGAIARTLQAVKMVLSYQPEELEWDSPHRTNQQQCYCYCGGPGEWYLRMLQCYRCR 217
+ A + L+ K SY PE L + P + +++ C +C RC+
Sbjct: 1488 ---QHQATKQLLECNKCRNSYHPECLGPNYPTKPTKKKKVWIC----------TKCVRCK 1534
Query: 218 -------------QWFHE--ACTQCLNEPMMFGDRFYLFFCSVCNQGPEYIERL 256
QW H+ C C +F + C C +Y ++
Sbjct: 1535 SCGSTTPGKGWDAQWSHDFSLCHDCAK---LFAKGNFCPLCDKCYDDDDYESKM 1585
>gi|148727368 bromodomain and PHD finger containing, 3 [Homo
sapiens]
Length = 1205
Score = 40.0 bits (92), Expect = 0.006
Identities = 42/154 (27%), Positives = 60/154 (38%), Gaps = 32/154 (20%)
Query: 95 EEPKCNICLGKTSGPLNEILICGKCGLGYHQQCH-IPIAGSADQPLLTPWFCRRCIFA-- 151
E+ C +CL N IL C C L HQ+C+ +P W CR C+ +
Sbjct: 211 EDAFCCVCLDDECHNSNVILFCDICNLAVHQECYGVPYIPEGQ------WLCRCCLQSPS 264
Query: 152 ------LAVRKGGALKK---GAIARTLQAVKM-------VLSYQPEELEWDSPHRTNQQQ 195
L KGGA K+ G A + A+ + + +P E + P +
Sbjct: 265 RPVDCILCPNKGGAFKQTSDGHWAHVVCAIWIPEVCFANTVFLEPIEGIDNIPPARWKLT 324
Query: 196 CY-CYCGGPGEWYLRMLQCYR--CRQWFHEACTQ 226
CY C G G +QC++ C FH C Q
Sbjct: 325 CYICKQKGLG----AAIQCHKVNCYTAFHVTCAQ 354
>gi|195976782 Paf1/RNA polymerase II complex component [Homo
sapiens]
Length = 710
Score = 39.7 bits (91), Expect = 0.008
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 448 STDAASTSGSASTSLSYDSRWTVGSRK-------RKLAAKAYMPLRAKRWAAELDGRCPS 500
S AAS+ S S D WT GS K RK+ K M +A + A+ G
Sbjct: 87 SQPAASSDSETSDS---DDEWTFGSNKNKKKGKARKIEKKGTMKKQANKTASS--GSSDK 141
Query: 501 DSSAEGASVPERPDEGIDSHTFESISEDDSS 531
DSSAE ++ E DS++ S S+ DSS
Sbjct: 142 DSSAESSAPEEGEVSDSDSNSSSSSSDSDSS 172
>gi|19923609 PHD finger protein 17 short isoform [Homo sapiens]
Length = 509
Score = 39.7 bits (91), Expect = 0.008
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 11/73 (15%)
Query: 95 EEPKCNICLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFA--- 151
E+ C++C NE++ C KC + HQ C+ G P W CR C
Sbjct: 202 EDVVCDVCQSPDGEDGNEMVFCDKCNICVHQACY----GILKVP-EGSWLCRTCALGVQP 256
Query: 152 ---LAVRKGGALK 161
L +KGGA+K
Sbjct: 257 KCLLCPKKGGAMK 269
>gi|40556393 PHD finger protein 17 long isoform [Homo sapiens]
Length = 842
Score = 39.7 bits (91), Expect = 0.008
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 11/73 (15%)
Query: 95 EEPKCNICLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFA--- 151
E+ C++C NE++ C KC + HQ C+ G P W CR C
Sbjct: 202 EDVVCDVCQSPDGEDGNEMVFCDKCNICVHQACY----GILKVP-EGSWLCRTCALGVQP 256
Query: 152 ---LAVRKGGALK 161
L +KGGA+K
Sbjct: 257 KCLLCPKKGGAMK 269
>gi|45580730 aminoadipate-semialdehyde dehydrogenase [Homo sapiens]
Length = 1098
Score = 39.7 bits (91), Expect = 0.008
Identities = 61/252 (24%), Positives = 95/252 (37%), Gaps = 44/252 (17%)
Query: 251 EYIERLPLRWVDVVHLALYNLGVQSKKKYFDFEEILAFVNHHWELLQLGKLTSTPVTDRG 310
+ +E + W + L L+ + + K + F+E+ ++ H +L + S P T G
Sbjct: 467 QQVESCAVTWYNQEKLILFMVSKDASVKEYIFKELQKYLPSHAVPDELVLIDSLPFTSHG 526
Query: 311 --------PHLLNALNSYKSRFLCGKEIKKKKCIFRLRIRVPPNPPGKLL--PDKGLLPN 360
LN +N L GKE +K + + + N P LL PD+ L N
Sbjct: 527 KIDVSELNKIYLNYINLKSENKLSGKEDLWEKLQYLWKSTL--NLPEDLLRVPDESLFLN 584
Query: 361 ENSAS-------SELRKR-GKSKPGLLPHEFQQQKRRVYRRKRSKFLLEDAIPSSDFT-- 410
S SE+ K G S PGLL +Y +L+ +P D T
Sbjct: 585 SGGDSLKSIRLLSEIEKLVGTSVPGLLEIILSSSILEIYNH-----ILQTVVPDEDVTFR 639
Query: 411 ---------------SAWSTNHHLASIFDFTL-DEIQSLKSASSGQTFFSDVDSTDAAST 454
A T+ H +I FT +EI + S G S ++ST +
Sbjct: 640 KSCATKRKLSDINQEEASGTSLHQKAIMTFTCHNEINAFVVLSRGSQILS-LNSTRFLTK 698
Query: 455 SGSASTSLSYDS 466
G S++ DS
Sbjct: 699 LGHCSSACPSDS 710
>gi|40556370 PHD finger protein 15 [Homo sapiens]
Length = 790
Score = 39.7 bits (91), Expect = 0.008
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 11/73 (15%)
Query: 95 EEPKCNICLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCIFA--- 151
E+ C++C NE++ C KC + HQ C+ G P W CR C
Sbjct: 198 EDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACY----GILKVP-TGSWLCRTCALGVQP 252
Query: 152 ---LAVRKGGALK 161
L ++GGALK
Sbjct: 253 KCLLCPKRGGALK 265
>gi|190343010 SP110 nuclear body protein isoform a [Homo sapiens]
Length = 689
Score = 37.4 bits (85), Expect = 0.038
Identities = 36/141 (25%), Positives = 55/141 (39%), Gaps = 26/141 (18%)
Query: 46 VLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNI-CLG 104
V C G+ Y K+K SS K + ED + +++ G + K NI C G
Sbjct: 466 VTCGEAKGILYKKKMKHGSSVK---CIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEG 522
Query: 105 KTSGPL---------------NEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCI 149
T G L ++L CG C +H+ CHIP P+ C
Sbjct: 523 MTLGELLKRKNSDECEVCCQGGQLLCCGTCPRVFHEDCHIP-------PVEAKRMLWSCT 575
Query: 150 FALAVRKGGALKKGAIARTLQ 170
F R G+ + +++TL+
Sbjct: 576 FCRMKRSSGSQQCHHVSKTLE 596
>gi|190343006 SP110 nuclear body protein isoform c [Homo sapiens]
Length = 713
Score = 37.4 bits (85), Expect = 0.038
Identities = 36/141 (25%), Positives = 55/141 (39%), Gaps = 26/141 (18%)
Query: 46 VLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQHAGVPGEEPKCNI-CLG 104
V C G+ Y K+K SS K + ED + +++ G + K NI C G
Sbjct: 466 VTCGEAKGILYKKKMKHGSSVK---CIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEG 522
Query: 105 KTSGPL---------------NEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCI 149
T G L ++L CG C +H+ CHIP P+ C
Sbjct: 523 MTLGELLKRKNSDECEVCCQGGQLLCCGTCPRVFHEDCHIP-------PVEAKRMLWSCT 575
Query: 150 FALAVRKGGALKKGAIARTLQ 170
F R G+ + +++TL+
Sbjct: 576 FCRMKRSSGSQQCHHVSKTLE 596
>gi|57546899 myeloid/lymphoid or mixed-lineage leukemia translocated
to, 10 isoform b [Homo sapiens]
Length = 1011
Score = 37.0 bits (84), Expect = 0.050
Identities = 41/154 (26%), Positives = 57/154 (37%), Gaps = 32/154 (20%)
Query: 99 CNICLGKTSGPLNEILICGK--CGLGYHQQCHIPIAGSADQPLLTPWFCRRC-------- 148
C +C + N ++ C C + HQ C+ G P PWFCR+C
Sbjct: 25 CCVCSDERGWAENPLVYCDGHGCSVAVHQACY----GIVQVPT-GPWFCRKCESQERAAR 79
Query: 149 -IFALAVRKGGALKK---GAIARTLQAVKM-------VLSYQPEELEWDSPHRTNQQQCY 197
L K GALK+ G A + A+ + V + +P L+ PH + CY
Sbjct: 80 VRCELCPHKDGALKRTDNGGWAHVVCALYIPEVQFANVSTMEPIVLQ-SVPHDRYNKTCY 138
Query: 198 CYCGGPGEWYLRMLQC-----YRCRQWFHEACTQ 226
E C + CRQ FH C Q
Sbjct: 139 ICDEQGRESKAATGACMTCNKHGCRQAFHVTCAQ 172
>gi|4757726 myeloid/lymphoid or mixed-lineage leukemia translocated
to, 10 isoform a [Homo sapiens]
Length = 1027
Score = 37.0 bits (84), Expect = 0.050
Identities = 41/154 (26%), Positives = 57/154 (37%), Gaps = 32/154 (20%)
Query: 99 CNICLGKTSGPLNEILICGK--CGLGYHQQCHIPIAGSADQPLLTPWFCRRC-------- 148
C +C + N ++ C C + HQ C+ G P PWFCR+C
Sbjct: 25 CCVCSDERGWAENPLVYCDGHGCSVAVHQACY----GIVQVPT-GPWFCRKCESQERAAR 79
Query: 149 -IFALAVRKGGALKK---GAIARTLQAVKM-------VLSYQPEELEWDSPHRTNQQQCY 197
L K GALK+ G A + A+ + V + +P L+ PH + CY
Sbjct: 80 VRCELCPHKDGALKRTDNGGWAHVVCALYIPEVQFANVSTMEPIVLQ-SVPHDRYNKTCY 138
Query: 198 CYCGGPGEWYLRMLQC-----YRCRQWFHEACTQ 226
E C + CRQ FH C Q
Sbjct: 139 ICDEQGRESKAATGACMTCNKHGCRQAFHVTCAQ 172
>gi|5454004 D4, zinc and double PHD fingers family 2 [Homo sapiens]
Length = 391
Score = 37.0 bits (84), Expect = 0.050
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 99 CNICLGKTSGPLNEILICGKCGLGYHQQCHIPIAGSADQPLLTPWFCRRCI 149
CNIC TS +++L C C GYH C P S +P W C C+
Sbjct: 330 CNIC--GTSENDDQLLFCDDCDRGYHMYCLTP---SMSEPPEGSWSCHLCL 375
>gi|215599585 integrator complex subunit 12 [Homo sapiens]
Length = 462
Score = 36.2 bits (82), Expect = 0.085
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 99 CNICLGKTSGPLNEILICGKCGLGYHQQCHIP--IAGSADQPLLTPWFCRRCI-----FA 151
C +C N+++ C +C YH+ CH P A+ P L W+C RC A
Sbjct: 162 CVVCRQMMVASGNQLVECQECHNLYHRDCHKPQVTDKEANDPRLV-WYCARCTRQMKRMA 220
Query: 152 LAVRKGGALKKGAIARTLQAVKMVLSYQPE 181
+K A+ AVK L +PE
Sbjct: 221 QKTQKPPQKPAPAVVSVTPAVKDPLVKKPE 250
>gi|21361851 integrator complex subunit 12 [Homo sapiens]
Length = 462
Score = 36.2 bits (82), Expect = 0.085
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 99 CNICLGKTSGPLNEILICGKCGLGYHQQCHIP--IAGSADQPLLTPWFCRRCI-----FA 151
C +C N+++ C +C YH+ CH P A+ P L W+C RC A
Sbjct: 162 CVVCRQMMVASGNQLVECQECHNLYHRDCHKPQVTDKEANDPRLV-WYCARCTRQMKRMA 220
Query: 152 LAVRKGGALKKGAIARTLQAVKMVLSYQPE 181
+K A+ AVK L +PE
Sbjct: 221 QKTQKPPQKPAPAVVSVTPAVKDPLVKKPE 250
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,791,635
Number of Sequences: 37866
Number of extensions: 1167461
Number of successful extensions: 3598
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 3455
Number of HSP's gapped (non-prelim): 186
length of query: 580
length of database: 18,247,518
effective HSP length: 108
effective length of query: 472
effective length of database: 14,157,990
effective search space: 6682571280
effective search space used: 6682571280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.