Guide to the Human Genome
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Name: C1orf124 Sequence: fasta or formatted (250aa) NCBI GI: 58331107
Description:

hypothetical protein LOC83932 isoform b

Not currently referenced in the text

Other entries for this name:
alt prot {489aa} hypothetical protein LOC83932 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         15           2
 C cysteine            2.8          7           1
 D aspartate           5.6         14           3
 E glutamate           8.8         22           2
 F phenylalanine       3.6          9           2
 G glycine             6.4         16           2
 H histidine           4.8         12           1
 I isoleucine          3.6          9           1
 K lysine              6.8         17           2
 L leucine            10.0         25           2
 M methionine          2.8          7           1
 N asparagine          4.0         10           2
 P proline             4.4         11           2
 Q glutamine           3.6          9           1
 R arginine            5.6         14           2
 S serine              4.0         10           1
 T threonine           4.4         11           1
 V valine              5.2         13           1
 W tryptophan          3.2          8           2
 Y tyrosine            4.4         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC83932 isoform b 
C1orf124              0.959   hypothetical protein LOC83932 isoform a 
SPTBN5                0.012   spectrin, beta, non-erythrocytic 5 
ACRC                  0.010   ACRC protein 
LOC100291299          0.006   PREDICTED: hypothetical protein XP_002347506 
LOC100287558          0.006   PREDICTED: hypothetical protein XP_002343325 
EDC4                  0.006   autoantigen RCD8 
FAM75C1               0.006   family with sequence similarity 75, member C1 [Homo...
CAPRIN1               0.006   membrane component chromosome 11 surface marker 1 is...
CAPRIN1               0.006   membrane component chromosome 11 surface marker 1 is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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