Guide to the Human Genome
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Search of human proteins with 58219066

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|58219066 solute carrier family 10 (sodium/bile acid
cotransporter family), member 5 [Homo sapiens]
         (438 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|58219066 solute carrier family 10 (sodium/bile acid cotranspo...   846   0.0  
gi|215422370 solute carrier family 10, member 3 isoform 1 [Homo ...   286   3e-77
gi|9790143 solute carrier family 10, member 3 isoform 1 [Homo sa...   286   3e-77
gi|215422368 solute carrier family 10, member 3 isoform 2 [Homo ...   273   2e-73
gi|4506973 solute carrier family 10 (sodium/bile acid cotranspor...   150   2e-36
gi|24308414 solute carrier family 10, member 4 [Homo sapiens]         135   1e-31
gi|37537552 sodium-dependent organic anion transporter [Homo sap...   125   8e-29
gi|4506971 solute carrier family 10, member 1 [Homo sapiens]          111   1e-24
gi|53828700 olfactory receptor, family 10, subfamily AG, member ...    37   0.027
gi|55749865 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Homo sapi...    32   1.1  
gi|55925593 olfactory receptor, family 8, subfamily G, member 2 ...    31   1.9  
gi|34878904 synaptonemal complex protein 1 [Homo sapiens]              31   2.5  
gi|4504079 glycosylphosphatidylinositol anchor attachment protei...    30   3.3  
gi|74048554 cancer susceptibility candidate 5 isoform 2 [Homo sa...    30   4.3  
gi|74048514 cancer susceptibility candidate 5 isoform 1 [Homo sa...    30   4.3  
gi|21314654 ring finger protein 139 [Homo sapiens]                     30   4.3  
gi|41322923 plectin 1 isoform 11 [Homo sapiens]                        30   4.3  
gi|41322914 plectin 1 isoform 10 [Homo sapiens]                        30   4.3  
gi|41322919 plectin 1 isoform 8 [Homo sapiens]                         30   4.3  
gi|41322910 plectin 1 isoform 7 [Homo sapiens]                         30   4.3  
gi|41322916 plectin 1 isoform 6 [Homo sapiens]                         30   4.3  
gi|41322908 plectin 1 isoform 3 [Homo sapiens]                         30   4.3  
gi|41322912 plectin 1 isoform 2 [Homo sapiens]                         30   4.3  
gi|47607492 plectin 1 isoform 1 [Homo sapiens]                         30   4.3  
gi|75750492 phosphatidylinositol glycan, class W [Homo sapiens]        30   5.7  
gi|224465231 solute carrier family 9, member 11 [Homo sapiens]         29   7.4  
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     29   7.4  
gi|52353342 olfactory receptor, family 6, subfamily K, member 6 ...    29   7.4  
gi|5032013 kinesin family member 20A [Homo sapiens]                    29   9.6  

>gi|58219066 solute carrier family 10 (sodium/bile acid
           cotransporter family), member 5 [Homo sapiens]
          Length = 438

 Score =  846 bits (2186), Expect = 0.0
 Identities = 438/438 (100%), Positives = 438/438 (100%)

Query: 1   MIRKLFIVLLLLLVTIEEARMSSLSFLNIEKTEILFFTKTEETILVSSSYENKRPNSSHL 60
           MIRKLFIVLLLLLVTIEEARMSSLSFLNIEKTEILFFTKTEETILVSSSYENKRPNSSHL
Sbjct: 1   MIRKLFIVLLLLLVTIEEARMSSLSFLNIEKTEILFFTKTEETILVSSSYENKRPNSSHL 60

Query: 61  FVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETNVTIQLWDSEGRQERLIEEIKN 120
           FVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETNVTIQLWDSEGRQERLIEEIKN
Sbjct: 61  FVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETNVTIQLWDSEGRQERLIEEIKN 120

Query: 121 VKVKVLKQKDSLLQAPMHIDRNILMLILPLILLNKCAFGCKIELQLFQTVWKRPLPVILG 180
           VKVKVLKQKDSLLQAPMHIDRNILMLILPLILLNKCAFGCKIELQLFQTVWKRPLPVILG
Sbjct: 121 VKVKVLKQKDSLLQAPMHIDRNILMLILPLILLNKCAFGCKIELQLFQTVWKRPLPVILG 180

Query: 181 AVTQFFLMPFCGFLLSQIVALPEAQAFGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTC 240
           AVTQFFLMPFCGFLLSQIVALPEAQAFGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTC
Sbjct: 181 AVTQFFLMPFCGFLLSQIVALPEAQAFGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTC 240

Query: 241 TSTLLALIMMPVNSYIYSRILGLSGTFHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKAS 300
           TSTLLALIMMPVNSYIYSRILGLSGTFHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKAS
Sbjct: 241 TSTLLALIMMPVNSYIYSRILGLSGTFHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKAS 300

Query: 301 FLERIIRPLSFILMFVGIYLTFTVGLVFLKTDNLEVILLGLLVPALGLLFGYSFAKVCTL 360
           FLERIIRPLSFILMFVGIYLTFTVGLVFLKTDNLEVILLGLLVPALGLLFGYSFAKVCTL
Sbjct: 301 FLERIIRPLSFILMFVGIYLTFTVGLVFLKTDNLEVILLGLLVPALGLLFGYSFAKVCTL 360

Query: 361 PLPVCKTVAIESGMLNSFLALAVIQLSFPQSKANLASVAPFTVAMCSGCEMLLIILVYKA 420
           PLPVCKTVAIESGMLNSFLALAVIQLSFPQSKANLASVAPFTVAMCSGCEMLLIILVYKA
Sbjct: 361 PLPVCKTVAIESGMLNSFLALAVIQLSFPQSKANLASVAPFTVAMCSGCEMLLIILVYKA 420

Query: 421 KKRCIFFLQDKRKRNFLI 438
           KKRCIFFLQDKRKRNFLI
Sbjct: 421 KKRCIFFLQDKRKRNFLI 438


>gi|215422370 solute carrier family 10, member 3 isoform 1 [Homo
           sapiens]
          Length = 477

 Score =  286 bits (732), Expect = 3e-77
 Identities = 156/391 (39%), Positives = 247/391 (63%), Gaps = 7/391 (1%)

Query: 33  EILFFTKTEETILVSSSYE---NKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTIN 89
           E  F   +E  I++SS Y    N+      L V   D ++L + NV+         F ++
Sbjct: 75  EFEFPEDSEGIIVISSQYPGQANRTAPGPMLRVTSLDTEVLTIKNVSAITWGGGGGFVVS 134

Query: 90  LVTDEEGETNVTIQLWDSEGRQERLIEEIKNVKVKVLKQKDS--LLQAPM-HIDRN-ILM 145
           + +   G   + IQL D+      LIEE ++  +KV   +D+   L A + H   N IL 
Sbjct: 135 IHSGLAGLAPLHIQLVDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILY 194

Query: 146 LILPLILLNKCAFGCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQIVALPEAQ 205
           L+LPLI +NKC+FGCK+EL++ + + + P P++LG + QF +MP   FL++++  LP+A 
Sbjct: 195 LLLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKAL 254

Query: 206 AFGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYSRILGLSG 265
           A G+++TC+ PGGGG YLF+LLL GD TLAI MT  ST+ A   +P++S IYSR+L +  
Sbjct: 255 ALGLIITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHE 314

Query: 266 TFHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMFVGIYLTFTVG 325
           T H+P+SKI+ TLLFI +P+++G++IK ++P+ +  L ++++P SF+L+  G++L + +G
Sbjct: 315 TLHVPISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMG 374

Query: 326 LVFLKTDNLEVILLGLLVPALGLLFGYSFAKVCTLPLPVCKTVAIESGMLNSFLALAVIQ 385
           +  L    L ++L+G+ VP +GLL GY  A    LP+   +TV+IE G+ NS LALA++Q
Sbjct: 375 VFILAGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQ 434

Query: 386 LSFPQSKANLASVAPFTVAMCSGCEMLLIIL 416
           LS  + +A+ AS APF VA+    EML +++
Sbjct: 435 LSLRRLQADYASQAPFIVALSGTSEMLALVI 465


>gi|9790143 solute carrier family 10, member 3 isoform 1 [Homo
           sapiens]
          Length = 477

 Score =  286 bits (732), Expect = 3e-77
 Identities = 156/391 (39%), Positives = 247/391 (63%), Gaps = 7/391 (1%)

Query: 33  EILFFTKTEETILVSSSYE---NKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTIN 89
           E  F   +E  I++SS Y    N+      L V   D ++L + NV+         F ++
Sbjct: 75  EFEFPEDSEGIIVISSQYPGQANRTAPGPMLRVTSLDTEVLTIKNVSAITWGGGGGFVVS 134

Query: 90  LVTDEEGETNVTIQLWDSEGRQERLIEEIKNVKVKVLKQKDS--LLQAPM-HIDRN-ILM 145
           + +   G   + IQL D+      LIEE ++  +KV   +D+   L A + H   N IL 
Sbjct: 135 IHSGLAGLAPLHIQLVDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILY 194

Query: 146 LILPLILLNKCAFGCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQIVALPEAQ 205
           L+LPLI +NKC+FGCK+EL++ + + + P P++LG + QF +MP   FL++++  LP+A 
Sbjct: 195 LLLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKAL 254

Query: 206 AFGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYSRILGLSG 265
           A G+++TC+ PGGGG YLF+LLL GD TLAI MT  ST+ A   +P++S IYSR+L +  
Sbjct: 255 ALGLIITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHE 314

Query: 266 TFHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMFVGIYLTFTVG 325
           T H+P+SKI+ TLLFI +P+++G++IK ++P+ +  L ++++P SF+L+  G++L + +G
Sbjct: 315 TLHVPISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMG 374

Query: 326 LVFLKTDNLEVILLGLLVPALGLLFGYSFAKVCTLPLPVCKTVAIESGMLNSFLALAVIQ 385
           +  L    L ++L+G+ VP +GLL GY  A    LP+   +TV+IE G+ NS LALA++Q
Sbjct: 375 VFILAGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQ 434

Query: 386 LSFPQSKANLASVAPFTVAMCSGCEMLLIIL 416
           LS  + +A+ AS APF VA+    EML +++
Sbjct: 435 LSLRRLQADYASQAPFIVALSGTSEMLALVI 465


>gi|215422368 solute carrier family 10, member 3 isoform 2 [Homo
           sapiens]
          Length = 448

 Score =  273 bits (698), Expect = 2e-73
 Identities = 141/330 (42%), Positives = 220/330 (66%), Gaps = 4/330 (1%)

Query: 91  VTDEEGETNVTIQLWDSEGRQERLIEEIKNVKVKVLKQKDS--LLQAPM-HIDRN-ILML 146
           VT  + E      L D+      LIEE ++  +KV   +D+   L A + H   N IL L
Sbjct: 107 VTSLDTEVLTIKNLVDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILYL 166

Query: 147 ILPLILLNKCAFGCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQIVALPEAQA 206
           +LPLI +NKC+FGCK+EL++ + + + P P++LG + QF +MP   FL++++  LP+A A
Sbjct: 167 LLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALA 226

Query: 207 FGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYSRILGLSGT 266
            G+++TC+ PGGGG YLF+LLL GD TLAI MT  ST+ A   +P++S IYSR+L +  T
Sbjct: 227 LGLIITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHET 286

Query: 267 FHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMFVGIYLTFTVGL 326
            H+P+SKI+ TLLFI +P+++G++IK ++P+ +  L ++++P SF+L+  G++L + +G+
Sbjct: 287 LHVPISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMGV 346

Query: 327 VFLKTDNLEVILLGLLVPALGLLFGYSFAKVCTLPLPVCKTVAIESGMLNSFLALAVIQL 386
             L    L ++L+G+ VP +GLL GY  A    LP+   +TV+IE G+ NS LALA++QL
Sbjct: 347 FILAGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQL 406

Query: 387 SFPQSKANLASVAPFTVAMCSGCEMLLIIL 416
           S  + +A+ AS APF VA+    EML +++
Sbjct: 407 SLRRLQADYASQAPFIVALSGTSEMLALVI 436


>gi|4506973 solute carrier family 10 (sodium/bile acid cotransporter
           family), member 2 [Homo sapiens]
          Length = 348

 Score =  150 bits (380), Expect = 2e-36
 Identities = 93/285 (32%), Positives = 155/285 (54%), Gaps = 10/285 (3%)

Query: 143 ILMLILPLILLNKCAFGCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQIVALP 202
           +L ++L L++ +    GC +E++ F    KRP  + +G + QF +MP  GF+LS    + 
Sbjct: 37  VLTILLALVMFS---MGCNVEIKKFLGHIKRPWGICVGFLCQFGIMPLTGFILSVAFDIL 93

Query: 203 EAQAFGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYSRILG 262
             QA  V++   CPGG    + A  +DGD  L++ MT  STLLAL MMP+   IY+++  
Sbjct: 94  PLQAVVVLIIGCCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLCLLIYTKMWV 153

Query: 263 LSGTFHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMFVGIYLTF 322
            SG+  IP   I ++L+ ++VPVSIG+ + H+ P+KA    +II  +  I   + I L  
Sbjct: 154 DSGSIVIPYDNIGTSLVALVVPVSIGMFVNHKWPQKA----KIILKIGSIAGAILIVLIA 209

Query: 323 TVGLVFLKTDNL---EVILLGLLVPALGLLFGYSFAKVCTLPLPVCKTVAIESGMLNSFL 379
            VG +  ++  +   ++ ++G + P  G   G+  A++  LP   C+TVA E+GM N+ L
Sbjct: 210 VVGGILYQSAWIIAPKLWIIGTIFPVAGYSLGFLLARIAGLPWYRCRTVAFETGMQNTQL 269

Query: 380 ALAVIQLSFPQSKANLASVAPFTVAMCSGCEMLLIILVYKAKKRC 424
              ++QLSF   + N+    P   ++       + +  Y A K+C
Sbjct: 270 CSTIVQLSFTPEELNVVFTFPLIYSIFQLAFAAIFLGFYVAYKKC 314


>gi|24308414 solute carrier family 10, member 4 [Homo sapiens]
          Length = 437

 Score =  135 bits (339), Expect = 1e-31
 Identities = 83/272 (30%), Positives = 141/272 (51%), Gaps = 4/272 (1%)

Query: 151 ILLNKCAFGCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQIVALPEAQAFGVV 210
           + +     GC +++  F    +RP+  +L A+ QF L+P   FLL+    L E  A  V+
Sbjct: 113 LCITMLGLGCTVDVNHFGAHVRRPVGALLAALCQFGLLPLLAFLLALAFKLDEVAAVAVL 172

Query: 211 MTCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYS-RILGLSGTFHI 269
           +   CPGG    L +LL+DGD  L+I+MT +STLLAL++MP+  +IYS   +       +
Sbjct: 173 LCGCCPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSWAWINTPIVQLL 232

Query: 270 PVSKIVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMFVGIYLTFT-VGLVF 328
           P+  +  TL   L+P+ +G+ I+++    A ++ ++      + + V   +T T +G   
Sbjct: 233 PLGTVTLTLCSTLIPIGLGVFIRYKYSRVADYIVKVSLWSLLVTLVVLFIMTGTMLGPEL 292

Query: 329 LKTDNLEVILLGLLVPALGLLFGYSFAKVCTLPLPVCK-TVAIESGMLNSFLALAVIQLS 387
           L +    V ++ + +P  G   GY  A +  LP P CK TV +E+G  N  L  A+++L+
Sbjct: 293 LASIPAAVYVIAIFMPLAGYASGYGLATLFHLP-PNCKRTVCLETGSQNVQLCTAILKLA 351

Query: 388 FPQSKANLASVAPFTVAMCSGCEMLLIILVYK 419
           FP        + P   A+    E  + +L+YK
Sbjct: 352 FPPQFIGSMYMFPLLYALFQSAEAGIFVLIYK 383


>gi|37537552 sodium-dependent organic anion transporter [Homo
           sapiens]
          Length = 377

 Score =  125 bits (314), Expect = 8e-29
 Identities = 77/292 (26%), Positives = 144/292 (49%), Gaps = 9/292 (3%)

Query: 137 MHIDRNILMLILPLILLNKCAF--GCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFL 194
           +H +  ++  ++  +++    F  GC +E++   +  +RP  + +G + QF LMPF  +L
Sbjct: 26  VHGNLELVFTVVSTVMMGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYL 85

Query: 195 LSQIVALPEAQAFGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIMMPVNS 254
           L+   +L   QA  V++   CPGG    +F   +DGD  L+I MT  ST+ AL MMP+  
Sbjct: 86  LAISFSLKPVQAIAVLIMGCCPGGTISNIFTFWVDGDMDLSISMTTCSTVAALGMMPLCI 145

Query: 255 YIYSRILGLSGTFHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFILM 314
           Y+Y+    L     IP   I  TL+ + +PV+ G+ + +R P+++  + +I   +  +L+
Sbjct: 146 YLYTWSWSLQQNLTIPYQNIGITLVCLTIPVAFGVYVNYRWPKQSKIILKIGAVVGGVLL 205

Query: 315 FVGIYLTFTVGLVFLK---TDNLEVILLGLLVPALGLLFGYSFAKVCTLPLPVCKTVAIE 371
            V        G+V  K     ++ ++ +  + P +G + G+  A         C+T+++E
Sbjct: 206 LV----VAVAGVVLAKGSWNSDITLLTISFIFPLIGHVTGFLLALFTHQSWQRCRTISLE 261

Query: 372 SGMLNSFLALAVIQLSFPQSKANLASVAPFTVAMCSGCEMLLIILVYKAKKR 423
           +G  N  + + ++QLSF           P    +    +  LI+  Y+  KR
Sbjct: 262 TGAQNIQMCITMLQLSFTAEHLVQMLSFPLAYGLFQLIDGFLIVAAYQTYKR 313


>gi|4506971 solute carrier family 10, member 1 [Homo sapiens]
          Length = 349

 Score =  111 bits (277), Expect = 1e-24
 Identities = 79/281 (28%), Positives = 138/281 (49%), Gaps = 11/281 (3%)

Query: 143 ILMLILPLILLNKCAFGCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQIVALP 202
           IL+ +L  I+L+    GC +E    +    +P  + +  V Q+ +MP   F+L ++  L 
Sbjct: 30  ILVFMLFFIMLS---LGCTMEFSKIKAHLWKPKGLAIALVAQYGIMPLTAFVLGKVFRLK 86

Query: 203 EAQAFGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYSR-IL 261
             +A  +++    PGG    +F+L + GD  L+I+MT  ST  AL MMP+  YIYSR I 
Sbjct: 87  NIEALAILVCGCSPGGNLSNVFSLAMKGDMNLSIVMTTCSTFCALGMMPLLLYIYSRGIY 146

Query: 262 GLSGTFHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMFVGIYLT 321
                  +P   IV +L+ +L+P +IGIV+K + P+   ++  +I+    I++   + +T
Sbjct: 147 DGDLKDKVPYKGIVISLVLVLIPCTIGIVLKSKRPQ---YMRYVIKGGMIIILLCSVAVT 203

Query: 322 ----FTVGLVFLKTDNLEVILLGLLVPALGLLFGYSFAKVCTLPLPVCKTVAIESGMLNS 377
                 VG   +      +I    L+P +G L GY  + +  L     +TV++E+G  N 
Sbjct: 204 VLSAINVGKSIMFAMTPLLIATSSLMPFIGFLLGYVLSALFCLNGRCRRTVSMETGCQNV 263

Query: 378 FLALAVIQLSFPQSKANLASVAPFTVAMCSGCEMLLIILVY 418
            L   ++ ++FP          P    +    E LL+I ++
Sbjct: 264 QLCSTILNVAFPPEVIGPLFFFPLLYMIFQLGEGLLLIAIF 304


>gi|53828700 olfactory receptor, family 10, subfamily AG, member 1
           [Homo sapiens]
          Length = 301

 Score = 37.4 bits (85), Expect = 0.027
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 9/66 (13%)

Query: 130 DSLLQAPMHIDRNILM---LILPLILLNKCAFGCKIELQLFQTVWKRPLPVILGAVTQFF 186
           + LL   M  DR + +   L  PL++ +K        +QL    W   +PV++G   Q F
Sbjct: 102 ECLLLTVMAYDRYVAICKPLQYPLVMNHKVC------IQLIIASWTITIPVVIGETCQIF 155

Query: 187 LMPFCG 192
           L+PFCG
Sbjct: 156 LLPFCG 161


>gi|55749865 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Homo
           sapiens]
          Length = 631

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 16/108 (14%)

Query: 23  SLSFLNIEKTEILFFTKTEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKISSD 82
           +L  +N  K  I+  T+ E+  L     EN  PN   +         +   ++A  +SSD
Sbjct: 434 NLVAVNTVKQNIIVTTEKEKRALTQEFVENMSPNDKVIM-------FVSQKHIADDLSSD 486

Query: 83  ATNFTINLVTDEEGETNVTIQLWDSEGRQERLIEEIKNVKVKVLKQKD 130
              F I  ++ E    N        +  QER +E+ K+  +K+L   D
Sbjct: 487 ---FNIQGISAESLHGN------SEQSDQERAVEDFKSGNIKILITTD 525


>gi|55925593 olfactory receptor, family 8, subfamily G, member 2
           [Homo sapiens]
          Length = 304

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 20/103 (19%)

Query: 309 LSFILMFVGIYLTFTVGLVFLKTDNLEVI-LLGLL----VPALGLLFGYSFAKVCTLPLP 363
           L   L+F+GIY+   VG       NL +I L+GL      P    L G SF       + 
Sbjct: 38  LRLFLLFLGIYVVTVVG-------NLSMITLIGLSSHLHTPMYYFLSGLSF-------ID 83

Query: 364 VCKTVAIESGMLNSFLALAVIQLSFPQSKANLASVAPFTVAMC 406
           +C +  I   ML +F+    I +S+P+    L     F +A C
Sbjct: 84  ICHSTIITPKMLVNFVTEKNI-ISYPECMTQLYFFLIFAIAEC 125


>gi|34878904 synaptonemal complex protein 1 [Homo sapiens]
          Length = 976

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 6/94 (6%)

Query: 7   IVLLLLLVTIEEARMSSLSFLNIEKTEILFFTKTEETILVSSSYENKRPNSSHLFVKIED 66
           + LLL+ +T +E +M  L+FL +E++        E+T L S + +       HL  ++ED
Sbjct: 268 VSLLLIQITEKENKMKDLTFL-LEESRDKVNQLEEKTKLQSENLKQSIEKQHHLTKELED 326

Query: 67  PKI--LQMVNVAKKISSD---ATNFTINLVTDEE 95
            K+   + V+  K +  D   AT     L  ++E
Sbjct: 327 IKVSLQRSVSTQKALEEDLQIATKTICQLTEEKE 360


>gi|4504079 glycosylphosphatidylinositol anchor attachment protein 1
           [Homo sapiens]
          Length = 621

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 9/188 (4%)

Query: 165 QLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQIVALPEAQAFGVV----MTCTCPGGGG 220
           +L Q+ +   LP +   V+    MP  GFLL  ++ L   + +  +    M    PGG  
Sbjct: 352 RLHQSFFLYLLPGLSRFVSIGLYMPAVGFLLL-VLGLKALELWMQLHEAGMGLEEPGGAP 410

Query: 221 GYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYSRILGLSGTFHIPVSKIVSTLLF 280
           G    L       LA L+   + LL    M +  Y+   +     T H PV++  + +L 
Sbjct: 411 GPSVPLPPSQGVGLASLV---APLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLT 467

Query: 281 ILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMFVGIYLTFTVGLVFLKTDNLEVILLG 340
           +L   + G+ + H      S  +   R    + +   IYL   +G + L   +L  +L  
Sbjct: 468 LLAIYAAGLALPHNTHRVVS-TQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLAT 526

Query: 341 LLVPALGL 348
            +VP   L
Sbjct: 527 TMVPTAAL 534


>gi|74048554 cancer susceptibility candidate 5 isoform 2 [Homo
            sapiens]
          Length = 2316

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 68   KILQMVNVAKKISSDATNFTINLVTDEEGETNVTIQLWDSEGR-QERLIEEIK 119
            KI +M  + KKI +  T         E+ E N  ++ WDSE R  E+ +E++K
Sbjct: 2011 KIDEMDKILKKIDNCLTEMETETKNLEDEEKNNPVEEWDSEMRAAEKELEQLK 2063


>gi|74048514 cancer susceptibility candidate 5 isoform 1 [Homo
            sapiens]
          Length = 2342

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 68   KILQMVNVAKKISSDATNFTINLVTDEEGETNVTIQLWDSEGR-QERLIEEIK 119
            KI +M  + KKI +  T         E+ E N  ++ WDSE R  E+ +E++K
Sbjct: 2037 KIDEMDKILKKIDNCLTEMETETKNLEDEEKNNPVEEWDSEMRAAEKELEQLK 2089


>gi|21314654 ring finger protein 139 [Homo sapiens]
          Length = 664

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 14/80 (17%)

Query: 310 SFILMFVGIYLTFTVGLVFLKTDNL---EVILLGLLVPALGLLFGYSFAKVCTLPLPVCK 366
           S  +  + + LTF +G V L   +    ++I+L LLVP +GL        +  LPL + +
Sbjct: 125 SLWMALIVLQLTFGIGYVTLLQIHSIYSQLIILDLLVPVIGL--------ITELPLHIRE 176

Query: 367 TVAIESGM---LNSFLALAV 383
           T+   S +   LN+   LAV
Sbjct: 177 TLLFTSSLILTLNTVFVLAV 196


>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
          Length = 4547

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 14/102 (13%)

Query: 40   TEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETN 99
            T+E + +  + E +R  S H   ++ +  I ++    +K+  +A    +      + E  
Sbjct: 2424 TQEKVTLVQTLEIQRQQSDHDAERLREA-IAELEREKEKLQQEAKLLQL------KSEEM 2476

Query: 100  VTIQLWDSEGRQERLIEEIKNVKVKVLKQKDSLLQAPMHIDR 141
             T+Q       QE+L++E + ++   L +KDSLLQ    I++
Sbjct: 2477 QTVQ-------QEQLLQETQALQQSFLSEKDSLLQRERFIEQ 2511


>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
          Length = 4551

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 14/102 (13%)

Query: 40   TEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETN 99
            T+E + +  + E +R  S H   ++ +  I ++    +K+  +A    +      + E  
Sbjct: 2428 TQEKVTLVQTLEIQRQQSDHDAERLREA-IAELEREKEKLQQEAKLLQL------KSEEM 2480

Query: 100  VTIQLWDSEGRQERLIEEIKNVKVKVLKQKDSLLQAPMHIDR 141
             T+Q       QE+L++E + ++   L +KDSLLQ    I++
Sbjct: 2481 QTVQ-------QEQLLQETQALQQSFLSEKDSLLQRERFIEQ 2515


>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
          Length = 4547

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 14/102 (13%)

Query: 40   TEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETN 99
            T+E + +  + E +R  S H   ++ +  I ++    +K+  +A    +      + E  
Sbjct: 2424 TQEKVTLVQTLEIQRQQSDHDAERLREA-IAELEREKEKLQQEAKLLQL------KSEEM 2476

Query: 100  VTIQLWDSEGRQERLIEEIKNVKVKVLKQKDSLLQAPMHIDR 141
             T+Q       QE+L++E + ++   L +KDSLLQ    I++
Sbjct: 2477 QTVQ-------QEQLLQETQALQQSFLSEKDSLLQRERFIEQ 2511


>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
          Length = 4515

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 14/102 (13%)

Query: 40   TEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETN 99
            T+E + +  + E +R  S H   ++ +  I ++    +K+  +A    +      + E  
Sbjct: 2392 TQEKVTLVQTLEIQRQQSDHDAERLREA-IAELEREKEKLQQEAKLLQL------KSEEM 2444

Query: 100  VTIQLWDSEGRQERLIEEIKNVKVKVLKQKDSLLQAPMHIDR 141
             T+Q       QE+L++E + ++   L +KDSLLQ    I++
Sbjct: 2445 QTVQ-------QEQLLQETQALQQSFLSEKDSLLQRERFIEQ 2479


>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
          Length = 4684

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 14/102 (13%)

Query: 40   TEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETN 99
            T+E + +  + E +R  S H   ++ +  I ++    +K+  +A    +      + E  
Sbjct: 2561 TQEKVTLVQTLEIQRQQSDHDAERLREA-IAELEREKEKLQQEAKLLQL------KSEEM 2613

Query: 100  VTIQLWDSEGRQERLIEEIKNVKVKVLKQKDSLLQAPMHIDR 141
             T+Q       QE+L++E + ++   L +KDSLLQ    I++
Sbjct: 2614 QTVQ-------QEQLLQETQALQQSFLSEKDSLLQRERFIEQ 2648


>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
          Length = 4525

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 14/102 (13%)

Query: 40   TEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETN 99
            T+E + +  + E +R  S H   ++ +  I ++    +K+  +A    +      + E  
Sbjct: 2402 TQEKVTLVQTLEIQRQQSDHDAERLREA-IAELEREKEKLQQEAKLLQL------KSEEM 2454

Query: 100  VTIQLWDSEGRQERLIEEIKNVKVKVLKQKDSLLQAPMHIDR 141
             T+Q       QE+L++E + ++   L +KDSLLQ    I++
Sbjct: 2455 QTVQ-------QEQLLQETQALQQSFLSEKDSLLQRERFIEQ 2489


>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
          Length = 4533

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 14/102 (13%)

Query: 40   TEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETN 99
            T+E + +  + E +R  S H   ++ +  I ++    +K+  +A    +      + E  
Sbjct: 2410 TQEKVTLVQTLEIQRQQSDHDAERLREA-IAELEREKEKLQQEAKLLQL------KSEEM 2462

Query: 100  VTIQLWDSEGRQERLIEEIKNVKVKVLKQKDSLLQAPMHIDR 141
             T+Q       QE+L++E + ++   L +KDSLLQ    I++
Sbjct: 2463 QTVQ-------QEQLLQETQALQQSFLSEKDSLLQRERFIEQ 2497


>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
          Length = 4574

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 14/102 (13%)

Query: 40   TEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETN 99
            T+E + +  + E +R  S H   ++ +  I ++    +K+  +A    +      + E  
Sbjct: 2451 TQEKVTLVQTLEIQRQQSDHDAERLREA-IAELEREKEKLQQEAKLLQL------KSEEM 2503

Query: 100  VTIQLWDSEGRQERLIEEIKNVKVKVLKQKDSLLQAPMHIDR 141
             T+Q       QE+L++E + ++   L +KDSLLQ    I++
Sbjct: 2504 QTVQ-------QEQLLQETQALQQSFLSEKDSLLQRERFIEQ 2538


>gi|75750492 phosphatidylinositol glycan, class W [Homo sapiens]
          Length = 504

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 21/95 (22%)

Query: 311 FILMFVGIYLTFTVGLVFLKTDNLEVILLGLLVPALGLLFGYSFAKVCTLPLPVCK---- 366
           F+++ V +  T T+   F+  +     LLG+++   GLL+     + C   LP  K    
Sbjct: 61  FVVLIVPMVATLTIWASFILLE-----LLGVIIFGAGLLYQIYRRRTCYARLPFLKILEK 115

Query: 367 --TVAIESG----------MLNSFLALAVIQLSFP 389
              +++ES           + ++F A+A++ + FP
Sbjct: 116 FLNISLESEYNPAISCFRVITSAFTAIAILAVDFP 150


>gi|224465231 solute carrier family 9, member 11 [Homo sapiens]
          Length = 1124

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 2/96 (2%)

Query: 255 YIYSRILGLSGTFH-IPVSKIVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFIL 313
           YIY  I+ L      + VS ++S   + +    +   +K  I  K  + ++    L F +
Sbjct: 620 YIYPMIIHLWPMARGLNVSALISINYYFMFLYVLESTLKIIIL-KRKYFQQCWNTLEFFI 678

Query: 314 MFVGIYLTFTVGLVFLKTDNLEVILLGLLVPALGLL 349
           + +GI   F V  V L+ DNL +I L +++  L ++
Sbjct: 679 LVIGIIDIFCVYFVKLRPDNLALIQLTVIMGYLRII 714


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 12/100 (12%)

Query: 30   EKTEILFFTKTEETILVSSSYEN----KRPNSSHLFVKIEDPKILQMVNVAKKISSDATN 85
            +KTE L   KT E I +SSS  N    +  +  H   K+++  +++   V++        
Sbjct: 1222 KKTEALLEAKTNELINISSSKTNAILSRISHCQHRTTKVKEALLIKTCTVSE------LE 1275

Query: 86   FTINLVTDEEGETNVTIQLWDSEGRQERLIEEIKNVKVKV 125
              +  +T+E+   N++ Q   +  + E    +IK++K  +
Sbjct: 1276 AQLRQLTEEQNTLNISFQ--QATHQLEEKENQIKSMKADI 1313


>gi|52353342 olfactory receptor, family 6, subfamily K, member 6
           [Homo sapiens]
          Length = 343

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 11/65 (16%)

Query: 190 FCGFLLSQIVALPEAQAFGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIM 249
           FCGFLL     LPE     +    T P  G   +  +  D  FT  + + CT T L +I+
Sbjct: 178 FCGFLL----VLPE-----IAWISTLPFCGSNQIHQIFCD--FTPVLSLACTDTFLVVIV 226

Query: 250 MPVNS 254
             +++
Sbjct: 227 DAIHA 231


>gi|5032013 kinesin family member 20A [Homo sapiens]
          Length = 890

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 18/96 (18%), Positives = 48/96 (50%), Gaps = 6/96 (6%)

Query: 93  DEEGETNVTIQLWDSEGRQERLIEEIKNVKVKVLKQKDSLLQAPMHIDRNILMLILPLIL 152
           D++ E    I ++     +E L++ ++ +K  +LK++   LQ  MH+   I   ++  + 
Sbjct: 546 DDDIENEADISMYG----KEELLQVVEAMKTLLLKERQEKLQLEMHLRDEICNEMVEQMQ 601

Query: 153 LNK--CAFGCKIELQLFQTVWKRPLPVILGAVTQFF 186
             +  C+     + +L + +++  L ++  ++T F+
Sbjct: 602 QREQWCSEHLDTQKELLEEMYEEKLNILKESLTSFY 637


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.328    0.143    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,338,217
Number of Sequences: 37866
Number of extensions: 589867
Number of successful extensions: 2114
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2091
Number of HSP's gapped (non-prelim): 33
length of query: 438
length of database: 18,247,518
effective HSP length: 105
effective length of query: 333
effective length of database: 14,271,588
effective search space: 4752438804
effective search space used: 4752438804
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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