BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|58219066 solute carrier family 10 (sodium/bile acid cotransporter family), member 5 [Homo sapiens] (438 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|58219066 solute carrier family 10 (sodium/bile acid cotranspo... 846 0.0 gi|215422370 solute carrier family 10, member 3 isoform 1 [Homo ... 286 3e-77 gi|9790143 solute carrier family 10, member 3 isoform 1 [Homo sa... 286 3e-77 gi|215422368 solute carrier family 10, member 3 isoform 2 [Homo ... 273 2e-73 gi|4506973 solute carrier family 10 (sodium/bile acid cotranspor... 150 2e-36 gi|24308414 solute carrier family 10, member 4 [Homo sapiens] 135 1e-31 gi|37537552 sodium-dependent organic anion transporter [Homo sap... 125 8e-29 gi|4506971 solute carrier family 10, member 1 [Homo sapiens] 111 1e-24 gi|53828700 olfactory receptor, family 10, subfamily AG, member ... 37 0.027 gi|55749865 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Homo sapi... 32 1.1 gi|55925593 olfactory receptor, family 8, subfamily G, member 2 ... 31 1.9 gi|34878904 synaptonemal complex protein 1 [Homo sapiens] 31 2.5 gi|4504079 glycosylphosphatidylinositol anchor attachment protei... 30 3.3 gi|74048554 cancer susceptibility candidate 5 isoform 2 [Homo sa... 30 4.3 gi|74048514 cancer susceptibility candidate 5 isoform 1 [Homo sa... 30 4.3 gi|21314654 ring finger protein 139 [Homo sapiens] 30 4.3 gi|41322923 plectin 1 isoform 11 [Homo sapiens] 30 4.3 gi|41322914 plectin 1 isoform 10 [Homo sapiens] 30 4.3 gi|41322919 plectin 1 isoform 8 [Homo sapiens] 30 4.3 gi|41322910 plectin 1 isoform 7 [Homo sapiens] 30 4.3 gi|41322916 plectin 1 isoform 6 [Homo sapiens] 30 4.3 gi|41322908 plectin 1 isoform 3 [Homo sapiens] 30 4.3 gi|41322912 plectin 1 isoform 2 [Homo sapiens] 30 4.3 gi|47607492 plectin 1 isoform 1 [Homo sapiens] 30 4.3 gi|75750492 phosphatidylinositol glycan, class W [Homo sapiens] 30 5.7 gi|224465231 solute carrier family 9, member 11 [Homo sapiens] 29 7.4 gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 29 7.4 gi|52353342 olfactory receptor, family 6, subfamily K, member 6 ... 29 7.4 gi|5032013 kinesin family member 20A [Homo sapiens] 29 9.6 >gi|58219066 solute carrier family 10 (sodium/bile acid cotransporter family), member 5 [Homo sapiens] Length = 438 Score = 846 bits (2186), Expect = 0.0 Identities = 438/438 (100%), Positives = 438/438 (100%) Query: 1 MIRKLFIVLLLLLVTIEEARMSSLSFLNIEKTEILFFTKTEETILVSSSYENKRPNSSHL 60 MIRKLFIVLLLLLVTIEEARMSSLSFLNIEKTEILFFTKTEETILVSSSYENKRPNSSHL Sbjct: 1 MIRKLFIVLLLLLVTIEEARMSSLSFLNIEKTEILFFTKTEETILVSSSYENKRPNSSHL 60 Query: 61 FVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETNVTIQLWDSEGRQERLIEEIKN 120 FVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETNVTIQLWDSEGRQERLIEEIKN Sbjct: 61 FVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETNVTIQLWDSEGRQERLIEEIKN 120 Query: 121 VKVKVLKQKDSLLQAPMHIDRNILMLILPLILLNKCAFGCKIELQLFQTVWKRPLPVILG 180 VKVKVLKQKDSLLQAPMHIDRNILMLILPLILLNKCAFGCKIELQLFQTVWKRPLPVILG Sbjct: 121 VKVKVLKQKDSLLQAPMHIDRNILMLILPLILLNKCAFGCKIELQLFQTVWKRPLPVILG 180 Query: 181 AVTQFFLMPFCGFLLSQIVALPEAQAFGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTC 240 AVTQFFLMPFCGFLLSQIVALPEAQAFGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTC Sbjct: 181 AVTQFFLMPFCGFLLSQIVALPEAQAFGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTC 240 Query: 241 TSTLLALIMMPVNSYIYSRILGLSGTFHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKAS 300 TSTLLALIMMPVNSYIYSRILGLSGTFHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKAS Sbjct: 241 TSTLLALIMMPVNSYIYSRILGLSGTFHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKAS 300 Query: 301 FLERIIRPLSFILMFVGIYLTFTVGLVFLKTDNLEVILLGLLVPALGLLFGYSFAKVCTL 360 FLERIIRPLSFILMFVGIYLTFTVGLVFLKTDNLEVILLGLLVPALGLLFGYSFAKVCTL Sbjct: 301 FLERIIRPLSFILMFVGIYLTFTVGLVFLKTDNLEVILLGLLVPALGLLFGYSFAKVCTL 360 Query: 361 PLPVCKTVAIESGMLNSFLALAVIQLSFPQSKANLASVAPFTVAMCSGCEMLLIILVYKA 420 PLPVCKTVAIESGMLNSFLALAVIQLSFPQSKANLASVAPFTVAMCSGCEMLLIILVYKA Sbjct: 361 PLPVCKTVAIESGMLNSFLALAVIQLSFPQSKANLASVAPFTVAMCSGCEMLLIILVYKA 420 Query: 421 KKRCIFFLQDKRKRNFLI 438 KKRCIFFLQDKRKRNFLI Sbjct: 421 KKRCIFFLQDKRKRNFLI 438 >gi|215422370 solute carrier family 10, member 3 isoform 1 [Homo sapiens] Length = 477 Score = 286 bits (732), Expect = 3e-77 Identities = 156/391 (39%), Positives = 247/391 (63%), Gaps = 7/391 (1%) Query: 33 EILFFTKTEETILVSSSYE---NKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTIN 89 E F +E I++SS Y N+ L V D ++L + NV+ F ++ Sbjct: 75 EFEFPEDSEGIIVISSQYPGQANRTAPGPMLRVTSLDTEVLTIKNVSAITWGGGGGFVVS 134 Query: 90 LVTDEEGETNVTIQLWDSEGRQERLIEEIKNVKVKVLKQKDS--LLQAPM-HIDRN-ILM 145 + + G + IQL D+ LIEE ++ +KV +D+ L A + H N IL Sbjct: 135 IHSGLAGLAPLHIQLVDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILY 194 Query: 146 LILPLILLNKCAFGCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQIVALPEAQ 205 L+LPLI +NKC+FGCK+EL++ + + + P P++LG + QF +MP FL++++ LP+A Sbjct: 195 LLLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKAL 254 Query: 206 AFGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYSRILGLSG 265 A G+++TC+ PGGGG YLF+LLL GD TLAI MT ST+ A +P++S IYSR+L + Sbjct: 255 ALGLIITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHE 314 Query: 266 TFHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMFVGIYLTFTVG 325 T H+P+SKI+ TLLFI +P+++G++IK ++P+ + L ++++P SF+L+ G++L + +G Sbjct: 315 TLHVPISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMG 374 Query: 326 LVFLKTDNLEVILLGLLVPALGLLFGYSFAKVCTLPLPVCKTVAIESGMLNSFLALAVIQ 385 + L L ++L+G+ VP +GLL GY A LP+ +TV+IE G+ NS LALA++Q Sbjct: 375 VFILAGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQ 434 Query: 386 LSFPQSKANLASVAPFTVAMCSGCEMLLIIL 416 LS + +A+ AS APF VA+ EML +++ Sbjct: 435 LSLRRLQADYASQAPFIVALSGTSEMLALVI 465 >gi|9790143 solute carrier family 10, member 3 isoform 1 [Homo sapiens] Length = 477 Score = 286 bits (732), Expect = 3e-77 Identities = 156/391 (39%), Positives = 247/391 (63%), Gaps = 7/391 (1%) Query: 33 EILFFTKTEETILVSSSYE---NKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTIN 89 E F +E I++SS Y N+ L V D ++L + NV+ F ++ Sbjct: 75 EFEFPEDSEGIIVISSQYPGQANRTAPGPMLRVTSLDTEVLTIKNVSAITWGGGGGFVVS 134 Query: 90 LVTDEEGETNVTIQLWDSEGRQERLIEEIKNVKVKVLKQKDS--LLQAPM-HIDRN-ILM 145 + + G + IQL D+ LIEE ++ +KV +D+ L A + H N IL Sbjct: 135 IHSGLAGLAPLHIQLVDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILY 194 Query: 146 LILPLILLNKCAFGCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQIVALPEAQ 205 L+LPLI +NKC+FGCK+EL++ + + + P P++LG + QF +MP FL++++ LP+A Sbjct: 195 LLLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKAL 254 Query: 206 AFGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYSRILGLSG 265 A G+++TC+ PGGGG YLF+LLL GD TLAI MT ST+ A +P++S IYSR+L + Sbjct: 255 ALGLIITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHE 314 Query: 266 TFHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMFVGIYLTFTVG 325 T H+P+SKI+ TLLFI +P+++G++IK ++P+ + L ++++P SF+L+ G++L + +G Sbjct: 315 TLHVPISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMG 374 Query: 326 LVFLKTDNLEVILLGLLVPALGLLFGYSFAKVCTLPLPVCKTVAIESGMLNSFLALAVIQ 385 + L L ++L+G+ VP +GLL GY A LP+ +TV+IE G+ NS LALA++Q Sbjct: 375 VFILAGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQ 434 Query: 386 LSFPQSKANLASVAPFTVAMCSGCEMLLIIL 416 LS + +A+ AS APF VA+ EML +++ Sbjct: 435 LSLRRLQADYASQAPFIVALSGTSEMLALVI 465 >gi|215422368 solute carrier family 10, member 3 isoform 2 [Homo sapiens] Length = 448 Score = 273 bits (698), Expect = 2e-73 Identities = 141/330 (42%), Positives = 220/330 (66%), Gaps = 4/330 (1%) Query: 91 VTDEEGETNVTIQLWDSEGRQERLIEEIKNVKVKVLKQKDS--LLQAPM-HIDRN-ILML 146 VT + E L D+ LIEE ++ +KV +D+ L A + H N IL L Sbjct: 107 VTSLDTEVLTIKNLVDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILYL 166 Query: 147 ILPLILLNKCAFGCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQIVALPEAQA 206 +LPLI +NKC+FGCK+EL++ + + + P P++LG + QF +MP FL++++ LP+A A Sbjct: 167 LLPLIFVNKCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALA 226 Query: 207 FGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYSRILGLSGT 266 G+++TC+ PGGGG YLF+LLL GD TLAI MT ST+ A +P++S IYSR+L + T Sbjct: 227 LGLIITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHET 286 Query: 267 FHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMFVGIYLTFTVGL 326 H+P+SKI+ TLLFI +P+++G++IK ++P+ + L ++++P SF+L+ G++L + +G+ Sbjct: 287 LHVPISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMGV 346 Query: 327 VFLKTDNLEVILLGLLVPALGLLFGYSFAKVCTLPLPVCKTVAIESGMLNSFLALAVIQL 386 L L ++L+G+ VP +GLL GY A LP+ +TV+IE G+ NS LALA++QL Sbjct: 347 FILAGIRLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQL 406 Query: 387 SFPQSKANLASVAPFTVAMCSGCEMLLIIL 416 S + +A+ AS APF VA+ EML +++ Sbjct: 407 SLRRLQADYASQAPFIVALSGTSEMLALVI 436 >gi|4506973 solute carrier family 10 (sodium/bile acid cotransporter family), member 2 [Homo sapiens] Length = 348 Score = 150 bits (380), Expect = 2e-36 Identities = 93/285 (32%), Positives = 155/285 (54%), Gaps = 10/285 (3%) Query: 143 ILMLILPLILLNKCAFGCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQIVALP 202 +L ++L L++ + GC +E++ F KRP + +G + QF +MP GF+LS + Sbjct: 37 VLTILLALVMFS---MGCNVEIKKFLGHIKRPWGICVGFLCQFGIMPLTGFILSVAFDIL 93 Query: 203 EAQAFGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYSRILG 262 QA V++ CPGG + A +DGD L++ MT STLLAL MMP+ IY+++ Sbjct: 94 PLQAVVVLIIGCCPGGTASNILAYWVDGDMDLSVSMTTCSTLLALGMMPLCLLIYTKMWV 153 Query: 263 LSGTFHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMFVGIYLTF 322 SG+ IP I ++L+ ++VPVSIG+ + H+ P+KA +II + I + I L Sbjct: 154 DSGSIVIPYDNIGTSLVALVVPVSIGMFVNHKWPQKA----KIILKIGSIAGAILIVLIA 209 Query: 323 TVGLVFLKTDNL---EVILLGLLVPALGLLFGYSFAKVCTLPLPVCKTVAIESGMLNSFL 379 VG + ++ + ++ ++G + P G G+ A++ LP C+TVA E+GM N+ L Sbjct: 210 VVGGILYQSAWIIAPKLWIIGTIFPVAGYSLGFLLARIAGLPWYRCRTVAFETGMQNTQL 269 Query: 380 ALAVIQLSFPQSKANLASVAPFTVAMCSGCEMLLIILVYKAKKRC 424 ++QLSF + N+ P ++ + + Y A K+C Sbjct: 270 CSTIVQLSFTPEELNVVFTFPLIYSIFQLAFAAIFLGFYVAYKKC 314 >gi|24308414 solute carrier family 10, member 4 [Homo sapiens] Length = 437 Score = 135 bits (339), Expect = 1e-31 Identities = 83/272 (30%), Positives = 141/272 (51%), Gaps = 4/272 (1%) Query: 151 ILLNKCAFGCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQIVALPEAQAFGVV 210 + + GC +++ F +RP+ +L A+ QF L+P FLL+ L E A V+ Sbjct: 113 LCITMLGLGCTVDVNHFGAHVRRPVGALLAALCQFGLLPLLAFLLALAFKLDEVAAVAVL 172 Query: 211 MTCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYS-RILGLSGTFHI 269 + CPGG L +LL+DGD L+I+MT +STLLAL++MP+ +IYS + + Sbjct: 173 LCGCCPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSWAWINTPIVQLL 232 Query: 270 PVSKIVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMFVGIYLTFT-VGLVF 328 P+ + TL L+P+ +G+ I+++ A ++ ++ + + V +T T +G Sbjct: 233 PLGTVTLTLCSTLIPIGLGVFIRYKYSRVADYIVKVSLWSLLVTLVVLFIMTGTMLGPEL 292 Query: 329 LKTDNLEVILLGLLVPALGLLFGYSFAKVCTLPLPVCK-TVAIESGMLNSFLALAVIQLS 387 L + V ++ + +P G GY A + LP P CK TV +E+G N L A+++L+ Sbjct: 293 LASIPAAVYVIAIFMPLAGYASGYGLATLFHLP-PNCKRTVCLETGSQNVQLCTAILKLA 351 Query: 388 FPQSKANLASVAPFTVAMCSGCEMLLIILVYK 419 FP + P A+ E + +L+YK Sbjct: 352 FPPQFIGSMYMFPLLYALFQSAEAGIFVLIYK 383 >gi|37537552 sodium-dependent organic anion transporter [Homo sapiens] Length = 377 Score = 125 bits (314), Expect = 8e-29 Identities = 77/292 (26%), Positives = 144/292 (49%), Gaps = 9/292 (3%) Query: 137 MHIDRNILMLILPLILLNKCAF--GCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFL 194 +H + ++ ++ +++ F GC +E++ + +RP + +G + QF LMPF +L Sbjct: 26 VHGNLELVFTVVSTVMMGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYL 85 Query: 195 LSQIVALPEAQAFGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIMMPVNS 254 L+ +L QA V++ CPGG +F +DGD L+I MT ST+ AL MMP+ Sbjct: 86 LAISFSLKPVQAIAVLIMGCCPGGTISNIFTFWVDGDMDLSISMTTCSTVAALGMMPLCI 145 Query: 255 YIYSRILGLSGTFHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFILM 314 Y+Y+ L IP I TL+ + +PV+ G+ + +R P+++ + +I + +L+ Sbjct: 146 YLYTWSWSLQQNLTIPYQNIGITLVCLTIPVAFGVYVNYRWPKQSKIILKIGAVVGGVLL 205 Query: 315 FVGIYLTFTVGLVFLK---TDNLEVILLGLLVPALGLLFGYSFAKVCTLPLPVCKTVAIE 371 V G+V K ++ ++ + + P +G + G+ A C+T+++E Sbjct: 206 LV----VAVAGVVLAKGSWNSDITLLTISFIFPLIGHVTGFLLALFTHQSWQRCRTISLE 261 Query: 372 SGMLNSFLALAVIQLSFPQSKANLASVAPFTVAMCSGCEMLLIILVYKAKKR 423 +G N + + ++QLSF P + + LI+ Y+ KR Sbjct: 262 TGAQNIQMCITMLQLSFTAEHLVQMLSFPLAYGLFQLIDGFLIVAAYQTYKR 313 >gi|4506971 solute carrier family 10, member 1 [Homo sapiens] Length = 349 Score = 111 bits (277), Expect = 1e-24 Identities = 79/281 (28%), Positives = 138/281 (49%), Gaps = 11/281 (3%) Query: 143 ILMLILPLILLNKCAFGCKIELQLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQIVALP 202 IL+ +L I+L+ GC +E + +P + + V Q+ +MP F+L ++ L Sbjct: 30 ILVFMLFFIMLS---LGCTMEFSKIKAHLWKPKGLAIALVAQYGIMPLTAFVLGKVFRLK 86 Query: 203 EAQAFGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYSR-IL 261 +A +++ PGG +F+L + GD L+I+MT ST AL MMP+ YIYSR I Sbjct: 87 NIEALAILVCGCSPGGNLSNVFSLAMKGDMNLSIVMTTCSTFCALGMMPLLLYIYSRGIY 146 Query: 262 GLSGTFHIPVSKIVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMFVGIYLT 321 +P IV +L+ +L+P +IGIV+K + P+ ++ +I+ I++ + +T Sbjct: 147 DGDLKDKVPYKGIVISLVLVLIPCTIGIVLKSKRPQ---YMRYVIKGGMIIILLCSVAVT 203 Query: 322 ----FTVGLVFLKTDNLEVILLGLLVPALGLLFGYSFAKVCTLPLPVCKTVAIESGMLNS 377 VG + +I L+P +G L GY + + L +TV++E+G N Sbjct: 204 VLSAINVGKSIMFAMTPLLIATSSLMPFIGFLLGYVLSALFCLNGRCRRTVSMETGCQNV 263 Query: 378 FLALAVIQLSFPQSKANLASVAPFTVAMCSGCEMLLIILVY 418 L ++ ++FP P + E LL+I ++ Sbjct: 264 QLCSTILNVAFPPEVIGPLFFFPLLYMIFQLGEGLLLIAIF 304 >gi|53828700 olfactory receptor, family 10, subfamily AG, member 1 [Homo sapiens] Length = 301 Score = 37.4 bits (85), Expect = 0.027 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 9/66 (13%) Query: 130 DSLLQAPMHIDRNILM---LILPLILLNKCAFGCKIELQLFQTVWKRPLPVILGAVTQFF 186 + LL M DR + + L PL++ +K +QL W +PV++G Q F Sbjct: 102 ECLLLTVMAYDRYVAICKPLQYPLVMNHKVC------IQLIIASWTITIPVVIGETCQIF 155 Query: 187 LMPFCG 192 L+PFCG Sbjct: 156 LLPFCG 161 >gi|55749865 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Homo sapiens] Length = 631 Score = 32.0 bits (71), Expect = 1.1 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 16/108 (14%) Query: 23 SLSFLNIEKTEILFFTKTEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKISSD 82 +L +N K I+ T+ E+ L EN PN + + ++A +SSD Sbjct: 434 NLVAVNTVKQNIIVTTEKEKRALTQEFVENMSPNDKVIM-------FVSQKHIADDLSSD 486 Query: 83 ATNFTINLVTDEEGETNVTIQLWDSEGRQERLIEEIKNVKVKVLKQKD 130 F I ++ E N + QER +E+ K+ +K+L D Sbjct: 487 ---FNIQGISAESLHGN------SEQSDQERAVEDFKSGNIKILITTD 525 >gi|55925593 olfactory receptor, family 8, subfamily G, member 2 [Homo sapiens] Length = 304 Score = 31.2 bits (69), Expect = 1.9 Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 20/103 (19%) Query: 309 LSFILMFVGIYLTFTVGLVFLKTDNLEVI-LLGLL----VPALGLLFGYSFAKVCTLPLP 363 L L+F+GIY+ VG NL +I L+GL P L G SF + Sbjct: 38 LRLFLLFLGIYVVTVVG-------NLSMITLIGLSSHLHTPMYYFLSGLSF-------ID 83 Query: 364 VCKTVAIESGMLNSFLALAVIQLSFPQSKANLASVAPFTVAMC 406 +C + I ML +F+ I +S+P+ L F +A C Sbjct: 84 ICHSTIITPKMLVNFVTEKNI-ISYPECMTQLYFFLIFAIAEC 125 >gi|34878904 synaptonemal complex protein 1 [Homo sapiens] Length = 976 Score = 30.8 bits (68), Expect = 2.5 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 6/94 (6%) Query: 7 IVLLLLLVTIEEARMSSLSFLNIEKTEILFFTKTEETILVSSSYENKRPNSSHLFVKIED 66 + LLL+ +T +E +M L+FL +E++ E+T L S + + HL ++ED Sbjct: 268 VSLLLIQITEKENKMKDLTFL-LEESRDKVNQLEEKTKLQSENLKQSIEKQHHLTKELED 326 Query: 67 PKI--LQMVNVAKKISSD---ATNFTINLVTDEE 95 K+ + V+ K + D AT L ++E Sbjct: 327 IKVSLQRSVSTQKALEEDLQIATKTICQLTEEKE 360 >gi|4504079 glycosylphosphatidylinositol anchor attachment protein 1 [Homo sapiens] Length = 621 Score = 30.4 bits (67), Expect = 3.3 Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 9/188 (4%) Query: 165 QLFQTVWKRPLPVILGAVTQFFLMPFCGFLLSQIVALPEAQAFGVV----MTCTCPGGGG 220 +L Q+ + LP + V+ MP GFLL ++ L + + + M PGG Sbjct: 352 RLHQSFFLYLLPGLSRFVSIGLYMPAVGFLLL-VLGLKALELWMQLHEAGMGLEEPGGAP 410 Query: 221 GYLFALLLDGDFTLAILMTCTSTLLALIMMPVNSYIYSRILGLSGTFHIPVSKIVSTLLF 280 G L LA L+ + LL M + Y+ + T H PV++ + +L Sbjct: 411 GPSVPLPPSQGVGLASLV---APLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLT 467 Query: 281 ILVPVSIGIVIKHRIPEKASFLERIIRPLSFILMFVGIYLTFTVGLVFLKTDNLEVILLG 340 +L + G+ + H S + R + + IYL +G + L +L +L Sbjct: 468 LLAIYAAGLALPHNTHRVVS-TQAPDRGWMALKLVALIYLALQLGCIALTNFSLGFLLAT 526 Query: 341 LLVPALGL 348 +VP L Sbjct: 527 TMVPTAAL 534 >gi|74048554 cancer susceptibility candidate 5 isoform 2 [Homo sapiens] Length = 2316 Score = 30.0 bits (66), Expect = 4.3 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 68 KILQMVNVAKKISSDATNFTINLVTDEEGETNVTIQLWDSEGR-QERLIEEIK 119 KI +M + KKI + T E+ E N ++ WDSE R E+ +E++K Sbjct: 2011 KIDEMDKILKKIDNCLTEMETETKNLEDEEKNNPVEEWDSEMRAAEKELEQLK 2063 >gi|74048514 cancer susceptibility candidate 5 isoform 1 [Homo sapiens] Length = 2342 Score = 30.0 bits (66), Expect = 4.3 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 68 KILQMVNVAKKISSDATNFTINLVTDEEGETNVTIQLWDSEGR-QERLIEEIK 119 KI +M + KKI + T E+ E N ++ WDSE R E+ +E++K Sbjct: 2037 KIDEMDKILKKIDNCLTEMETETKNLEDEEKNNPVEEWDSEMRAAEKELEQLK 2089 >gi|21314654 ring finger protein 139 [Homo sapiens] Length = 664 Score = 30.0 bits (66), Expect = 4.3 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 14/80 (17%) Query: 310 SFILMFVGIYLTFTVGLVFLKTDNL---EVILLGLLVPALGLLFGYSFAKVCTLPLPVCK 366 S + + + LTF +G V L + ++I+L LLVP +GL + LPL + + Sbjct: 125 SLWMALIVLQLTFGIGYVTLLQIHSIYSQLIILDLLVPVIGL--------ITELPLHIRE 176 Query: 367 TVAIESGM---LNSFLALAV 383 T+ S + LN+ LAV Sbjct: 177 TLLFTSSLILTLNTVFVLAV 196 >gi|41322923 plectin 1 isoform 11 [Homo sapiens] Length = 4547 Score = 30.0 bits (66), Expect = 4.3 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 14/102 (13%) Query: 40 TEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETN 99 T+E + + + E +R S H ++ + I ++ +K+ +A + + E Sbjct: 2424 TQEKVTLVQTLEIQRQQSDHDAERLREA-IAELEREKEKLQQEAKLLQL------KSEEM 2476 Query: 100 VTIQLWDSEGRQERLIEEIKNVKVKVLKQKDSLLQAPMHIDR 141 T+Q QE+L++E + ++ L +KDSLLQ I++ Sbjct: 2477 QTVQ-------QEQLLQETQALQQSFLSEKDSLLQRERFIEQ 2511 >gi|41322914 plectin 1 isoform 10 [Homo sapiens] Length = 4551 Score = 30.0 bits (66), Expect = 4.3 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 14/102 (13%) Query: 40 TEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETN 99 T+E + + + E +R S H ++ + I ++ +K+ +A + + E Sbjct: 2428 TQEKVTLVQTLEIQRQQSDHDAERLREA-IAELEREKEKLQQEAKLLQL------KSEEM 2480 Query: 100 VTIQLWDSEGRQERLIEEIKNVKVKVLKQKDSLLQAPMHIDR 141 T+Q QE+L++E + ++ L +KDSLLQ I++ Sbjct: 2481 QTVQ-------QEQLLQETQALQQSFLSEKDSLLQRERFIEQ 2515 >gi|41322919 plectin 1 isoform 8 [Homo sapiens] Length = 4547 Score = 30.0 bits (66), Expect = 4.3 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 14/102 (13%) Query: 40 TEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETN 99 T+E + + + E +R S H ++ + I ++ +K+ +A + + E Sbjct: 2424 TQEKVTLVQTLEIQRQQSDHDAERLREA-IAELEREKEKLQQEAKLLQL------KSEEM 2476 Query: 100 VTIQLWDSEGRQERLIEEIKNVKVKVLKQKDSLLQAPMHIDR 141 T+Q QE+L++E + ++ L +KDSLLQ I++ Sbjct: 2477 QTVQ-------QEQLLQETQALQQSFLSEKDSLLQRERFIEQ 2511 >gi|41322910 plectin 1 isoform 7 [Homo sapiens] Length = 4515 Score = 30.0 bits (66), Expect = 4.3 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 14/102 (13%) Query: 40 TEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETN 99 T+E + + + E +R S H ++ + I ++ +K+ +A + + E Sbjct: 2392 TQEKVTLVQTLEIQRQQSDHDAERLREA-IAELEREKEKLQQEAKLLQL------KSEEM 2444 Query: 100 VTIQLWDSEGRQERLIEEIKNVKVKVLKQKDSLLQAPMHIDR 141 T+Q QE+L++E + ++ L +KDSLLQ I++ Sbjct: 2445 QTVQ-------QEQLLQETQALQQSFLSEKDSLLQRERFIEQ 2479 >gi|41322916 plectin 1 isoform 6 [Homo sapiens] Length = 4684 Score = 30.0 bits (66), Expect = 4.3 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 14/102 (13%) Query: 40 TEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETN 99 T+E + + + E +R S H ++ + I ++ +K+ +A + + E Sbjct: 2561 TQEKVTLVQTLEIQRQQSDHDAERLREA-IAELEREKEKLQQEAKLLQL------KSEEM 2613 Query: 100 VTIQLWDSEGRQERLIEEIKNVKVKVLKQKDSLLQAPMHIDR 141 T+Q QE+L++E + ++ L +KDSLLQ I++ Sbjct: 2614 QTVQ-------QEQLLQETQALQQSFLSEKDSLLQRERFIEQ 2648 >gi|41322908 plectin 1 isoform 3 [Homo sapiens] Length = 4525 Score = 30.0 bits (66), Expect = 4.3 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 14/102 (13%) Query: 40 TEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETN 99 T+E + + + E +R S H ++ + I ++ +K+ +A + + E Sbjct: 2402 TQEKVTLVQTLEIQRQQSDHDAERLREA-IAELEREKEKLQQEAKLLQL------KSEEM 2454 Query: 100 VTIQLWDSEGRQERLIEEIKNVKVKVLKQKDSLLQAPMHIDR 141 T+Q QE+L++E + ++ L +KDSLLQ I++ Sbjct: 2455 QTVQ-------QEQLLQETQALQQSFLSEKDSLLQRERFIEQ 2489 >gi|41322912 plectin 1 isoform 2 [Homo sapiens] Length = 4533 Score = 30.0 bits (66), Expect = 4.3 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 14/102 (13%) Query: 40 TEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETN 99 T+E + + + E +R S H ++ + I ++ +K+ +A + + E Sbjct: 2410 TQEKVTLVQTLEIQRQQSDHDAERLREA-IAELEREKEKLQQEAKLLQL------KSEEM 2462 Query: 100 VTIQLWDSEGRQERLIEEIKNVKVKVLKQKDSLLQAPMHIDR 141 T+Q QE+L++E + ++ L +KDSLLQ I++ Sbjct: 2463 QTVQ-------QEQLLQETQALQQSFLSEKDSLLQRERFIEQ 2497 >gi|47607492 plectin 1 isoform 1 [Homo sapiens] Length = 4574 Score = 30.0 bits (66), Expect = 4.3 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 14/102 (13%) Query: 40 TEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKISSDATNFTINLVTDEEGETN 99 T+E + + + E +R S H ++ + I ++ +K+ +A + + E Sbjct: 2451 TQEKVTLVQTLEIQRQQSDHDAERLREA-IAELEREKEKLQQEAKLLQL------KSEEM 2503 Query: 100 VTIQLWDSEGRQERLIEEIKNVKVKVLKQKDSLLQAPMHIDR 141 T+Q QE+L++E + ++ L +KDSLLQ I++ Sbjct: 2504 QTVQ-------QEQLLQETQALQQSFLSEKDSLLQRERFIEQ 2538 >gi|75750492 phosphatidylinositol glycan, class W [Homo sapiens] Length = 504 Score = 29.6 bits (65), Expect = 5.7 Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 21/95 (22%) Query: 311 FILMFVGIYLTFTVGLVFLKTDNLEVILLGLLVPALGLLFGYSFAKVCTLPLPVCK---- 366 F+++ V + T T+ F+ + LLG+++ GLL+ + C LP K Sbjct: 61 FVVLIVPMVATLTIWASFILLE-----LLGVIIFGAGLLYQIYRRRTCYARLPFLKILEK 115 Query: 367 --TVAIESG----------MLNSFLALAVIQLSFP 389 +++ES + ++F A+A++ + FP Sbjct: 116 FLNISLESEYNPAISCFRVITSAFTAIAILAVDFP 150 >gi|224465231 solute carrier family 9, member 11 [Homo sapiens] Length = 1124 Score = 29.3 bits (64), Expect = 7.4 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 2/96 (2%) Query: 255 YIYSRILGLSGTFH-IPVSKIVSTLLFILVPVSIGIVIKHRIPEKASFLERIIRPLSFIL 313 YIY I+ L + VS ++S + + + +K I K + ++ L F + Sbjct: 620 YIYPMIIHLWPMARGLNVSALISINYYFMFLYVLESTLKIIIL-KRKYFQQCWNTLEFFI 678 Query: 314 MFVGIYLTFTVGLVFLKTDNLEVILLGLLVPALGLL 349 + +GI F V V L+ DNL +I L +++ L ++ Sbjct: 679 LVIGIIDIFCVYFVKLRPDNLALIQLTVIMGYLRII 714 >gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] Length = 2230 Score = 29.3 bits (64), Expect = 7.4 Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 12/100 (12%) Query: 30 EKTEILFFTKTEETILVSSSYEN----KRPNSSHLFVKIEDPKILQMVNVAKKISSDATN 85 +KTE L KT E I +SSS N + + H K+++ +++ V++ Sbjct: 1222 KKTEALLEAKTNELINISSSKTNAILSRISHCQHRTTKVKEALLIKTCTVSE------LE 1275 Query: 86 FTINLVTDEEGETNVTIQLWDSEGRQERLIEEIKNVKVKV 125 + +T+E+ N++ Q + + E +IK++K + Sbjct: 1276 AQLRQLTEEQNTLNISFQ--QATHQLEEKENQIKSMKADI 1313 >gi|52353342 olfactory receptor, family 6, subfamily K, member 6 [Homo sapiens] Length = 343 Score = 29.3 bits (64), Expect = 7.4 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 11/65 (16%) Query: 190 FCGFLLSQIVALPEAQAFGVVMTCTCPGGGGGYLFALLLDGDFTLAILMTCTSTLLALIM 249 FCGFLL LPE + T P G + + D FT + + CT T L +I+ Sbjct: 178 FCGFLL----VLPE-----IAWISTLPFCGSNQIHQIFCD--FTPVLSLACTDTFLVVIV 226 Query: 250 MPVNS 254 +++ Sbjct: 227 DAIHA 231 >gi|5032013 kinesin family member 20A [Homo sapiens] Length = 890 Score = 28.9 bits (63), Expect = 9.6 Identities = 18/96 (18%), Positives = 48/96 (50%), Gaps = 6/96 (6%) Query: 93 DEEGETNVTIQLWDSEGRQERLIEEIKNVKVKVLKQKDSLLQAPMHIDRNILMLILPLIL 152 D++ E I ++ +E L++ ++ +K +LK++ LQ MH+ I ++ + Sbjct: 546 DDDIENEADISMYG----KEELLQVVEAMKTLLLKERQEKLQLEMHLRDEICNEMVEQMQ 601 Query: 153 LNK--CAFGCKIELQLFQTVWKRPLPVILGAVTQFF 186 + C+ + +L + +++ L ++ ++T F+ Sbjct: 602 QREQWCSEHLDTQKELLEEMYEEKLNILKESLTSFY 637 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.328 0.143 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,338,217 Number of Sequences: 37866 Number of extensions: 589867 Number of successful extensions: 2114 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 2091 Number of HSP's gapped (non-prelim): 33 length of query: 438 length of database: 18,247,518 effective HSP length: 105 effective length of query: 333 effective length of database: 14,271,588 effective search space: 4752438804 effective search space used: 4752438804 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.