Guide to the Human Genome
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Name: SLC10A2 Sequence: fasta or formatted (348aa) NCBI GI: 4506973
Description:

solute carrier family 10 (sodium/bile acid cotransporter family), member 2

Referenced in:

Kidney
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         25           2
 C cysteine            3.7         13           2
 D aspartate           2.6          9           1
 E glutamate           3.2         11           2
 F phenylalanine       5.7         20           1
 G glycine             8.3         29           2
 H histidine           0.9          3           1
 I isoleucine         10.1         35           2
 K lysine              4.6         16           2
 L leucine            10.9         38           2
 M methionine          3.2         11           2
 N asparagine          4.3         15           2
 P proline             5.2         18           1
 Q glutamine           2.6          9           1
 R arginine            1.1          4           1
 S serine              7.2         25           2
 T threonine           5.2         18           2
 V valine              9.2         32           3
 W tryptophan          2.0          7           1
 Y tyrosine            2.9         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 10 (sodium/bile acid cotranspor... 
SLC10A6               0.452   sodium-dependent organic anion transporter 
SLC10A4               0.281   solute carrier family 10, member 4 
SLC10A1               0.271   solute carrier family 10, member 1 
SLC10A5               0.184   solute carrier family 10 (sodium/bile acid cotranspo...
SLC10A3               0.140   solute carrier family 10, member 3 isoform 1 
SLC10A3               0.140   solute carrier family 10, member 3 isoform 2 
SLC10A3               0.140   solute carrier family 10, member 3 isoform 1 
CCKBR                 0.016   cholecystokinin B receptor 
ASTN2                 0.007   astrotactin 2 isoform c 
ASTN2                 0.007   astrotactin 2 isoform b 
ASTN2                 0.007   astrotactin 2 isoform a 
TM9SF3                0.007   transmembrane 9 superfamily member 3 
SPRY4                 0.006   sprouty homolog 4 isoform 2 
SPRY4                 0.006   sprouty homolog 4 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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