Guide to the Human Genome
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Name: SLC10A3 Sequence: fasta or formatted (448aa) NCBI GI: 215422368
Description:

solute carrier family 10, member 3 isoform 2

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [477aa] solute carrier family 10, member 3 isoform 1
alt prot [477aa] solute carrier family 10, member 3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         34           2
 C cysteine            1.3          6           1
 D aspartate           2.2         10           1
 E glutamate           3.6         16           2
 F phenylalanine       4.7         21           1
 G glycine             9.6         43           4
 H histidine           1.3          6           1
 I isoleucine          6.5         29           2
 K lysine              3.1         14           1
 L leucine            17.9         80           3
 M methionine          3.1         14           1
 N asparagine          1.1          5           1
 P proline             6.9         31           2
 Q glutamine           3.6         16           2
 R arginine            2.9         13           2
 S serine              8.9         40           2
 T threonine           5.4         24           1
 V valine              7.6         34           2
 W tryptophan          0.4          2           1
 Y tyrosine            2.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 10, member 3 isoform 2 
SLC10A3               0.982   solute carrier family 10, member 3 isoform 1 
SLC10A3               0.982   solute carrier family 10, member 3 isoform 1 
SLC10A5               0.295   solute carrier family 10 (sodium/bile acid cotranspo...
SLC10A1               0.124   solute carrier family 10, member 1 
SLC10A6               0.124   sodium-dependent organic anion transporter 
SLC10A2               0.113   solute carrier family 10 (sodium/bile acid cotranspor...
SLC10A4               0.113   solute carrier family 10, member 4 
TRIM33                0.014   tripartite motif-containing 33 protein isoform beta ...
TRIM33                0.014   tripartite motif-containing 33 protein isoform alpha...
GPR137B               0.012   G protein-coupled receptor 137B 
OR6C65                0.008   olfactory receptor, family 6, subfamily C, member 65...
OR51D1                0.008   olfactory receptor, family 51, subfamily D, member 1...
OR6C4                 0.008   olfactory receptor, family 6, subfamily C, member 4 ...
OR6C68                0.008   olfactory receptor, family 6, subfamily C, member 68...
UMOD                  0.007   uromodulin precursor 
UMOD                  0.007   uromodulin precursor 
FRMPD4                0.006   FERM and PDZ domain containing 4 
NPBWR2                0.006   neuropeptides B/W receptor 2 
GLI1                  0.005   GLI family zinc finger 1 isoform 2 
GLI1                  0.005   GLI family zinc finger 1 isoform 1 
LOC100292008          0.005   PREDICTED: similar to ZNF668 protein 
LOC100291370          0.005   PREDICTED: hypothetical protein XP_002347637 
LOC100287385          0.005   PREDICTED: hypothetical protein XP_002343487 
AZI1                  0.005   5-azacytidine induced 1 isoform b 
AZI1                  0.005   5-azacytidine induced 1 isoform a 
IL20RA                0.005   interleukin 20 receptor, alpha 
SFPQ                  0.005   splicing factor proline/glutamine rich (polypyrimidin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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