Guide to the Human Genome
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Name: SLC10A3 Sequence: fasta or formatted (477aa) NCBI GI: 9790143
Description:

solute carrier family 10, member 3 isoform 1

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [448aa] solute carrier family 10, member 3 isoform 2
alt mRNA [477aa] solute carrier family 10, member 3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         37           2
 C cysteine            1.3          6           1
 D aspartate           2.1         10           1
 E glutamate           3.4         16           2
 F phenylalanine       4.6         22           1
 G glycine            10.5         50           5
 H histidine           1.7          8           1
 I isoleucine          6.7         32           2
 K lysine              2.9         14           1
 L leucine            17.4         83           3
 M methionine          2.9         14           1
 N asparagine          1.0          5           1
 P proline             6.7         32           2
 Q glutamine           3.6         17           2
 R arginine            2.7         13           2
 S serine              9.0         43           2
 T threonine           5.2         25           1
 V valine              7.8         37           2
 W tryptophan          0.6          3           1
 Y tyrosine            2.1         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 10, member 3 isoform 1 
SLC10A3               1.000   solute carrier family 10, member 3 isoform 1 
SLC10A3               0.918   solute carrier family 10, member 3 isoform 2 
SLC10A5               0.290   solute carrier family 10 (sodium/bile acid cotranspo...
SLC10A1               0.116   solute carrier family 10, member 1 
SLC10A6               0.116   sodium-dependent organic anion transporter 
SLC10A2               0.106   solute carrier family 10 (sodium/bile acid cotranspor...
SLC10A4               0.106   solute carrier family 10, member 4 
GPR137B               0.011   G protein-coupled receptor 137B 
OR6C65                0.008   olfactory receptor, family 6, subfamily C, member 65...
MUC16                 0.008   mucin 16 
OR51D1                0.008   olfactory receptor, family 51, subfamily D, member 1...
OR6C4                 0.008   olfactory receptor, family 6, subfamily C, member 4 ...
MADD                  0.008   MAP-kinase activating death domain-containing prote...
MADD                  0.008   MAP-kinase activating death domain-containing prote...
OR6C68                0.008   olfactory receptor, family 6, subfamily C, member 68...
UMOD                  0.007   uromodulin precursor 
UMOD                  0.007   uromodulin precursor 
NPBWR2                0.006   neuropeptides B/W receptor 2 
GLI1                  0.004   GLI family zinc finger 1 isoform 2 
GLI1                  0.004   GLI family zinc finger 1 isoform 1 
LOC100292008          0.004   PREDICTED: similar to ZNF668 protein 
LOC100291370          0.004   PREDICTED: hypothetical protein XP_002347637 
LOC100287385          0.004   PREDICTED: hypothetical protein XP_002343487 
SCAF1                 0.004   SR-related CTD-associated factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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