Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RAB32 Sequence: fasta or formatted (225aa) NCBI GI: 5803133
Description:

RAB32, member RAS oncogene family

Referenced in:

Lysosomes and Related Organelles
Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         20           4
 C cysteine            1.8          4           2
 D aspartate           6.2         14           1
 E glutamate           6.7         15           2
 F phenylalanine       5.3         12           1
 G glycine             7.1         16           3
 H histidine           2.7          6           1
 I isoleucine          4.9         11           2
 K lysine              7.1         16           1
 L leucine             8.4         19           2
 M methionine          0.9          2           1
 N asparagine          4.9         11           1
 P proline             3.6          8           1
 Q glutamine           4.9         11           1
 R arginine            4.4         10           1
 S serine              7.1         16           2
 T threonine           3.6          8           1
 V valine              8.0         18           2
 W tryptophan          1.8          4           1
 Y tyrosine            1.8          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAB32, member RAS oncogene family 
RAB38                 0.586   RAB38 
RAB7L1                0.444   RAB7, member RAS oncogene family-like 1 isoform 1 [...
RAB7L1                0.444   RAB7, member RAS oncogene family-like 1 isoform 1 [Ho...
RAB7L1                0.329   RAB7, member RAS oncogene family-like 1 isoform 2 [...
RAB10                 0.252   ras-related GTP-binding protein RAB10 
RAB13                 0.243   RAB13, member RAS oncogene family 
LOC100131294          0.241   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.241   PREDICTED: similar to hCG24991 
LOC100131294          0.241   PREDICTED: similar to hCG24991 
RAB43                 0.227   RAB43 protein 
RAB8B                 0.225   RAB8B, member RAS oncogene family 
RAB7B                 0.225   RAB7B, member RAS oncogene family 
RAB35                 0.222   RAB35, member RAS oncogene family 
RAB12                 0.222   RAB12, member RAS oncogene family 
RAB8A                 0.220   mel transforming oncogene 
RAB7A                 0.220   RAB7, member RAS oncogene family 
RAB7L1                0.218   RAB7, member RAS oncogene family-like 1 isoform 3 [...
RAB19                 0.213   RAB19, member RAS oncogene family 
RAB3C                 0.208   RAB3C, member RAS oncogene family 
RAB3A                 0.208   RAB3A, member RAS oncogene family 
RAB2B                 0.206   RAB2B protein isoform 1 
RAB11B                0.206   RAB11B, member RAS oncogene family 
RAB11A                0.206   Ras-related protein Rab-11A 
RAB2A                 0.206   RAB2A, member RAS oncogene family 
RAB14                 0.204   GTPase Rab14 
RAB4B                 0.199   ras-related GTP-binding protein 4b 
RAB3B                 0.199   RAB3B, member RAS oncogene family 
RAB4A                 0.199   RAB4A, member RAS oncogene family 
RAB3D                 0.199   RAB3D, member RAS oncogene family 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press