Guide to the Human Genome
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Name: CDC42EP2 Sequence: fasta or formatted (210aa) NCBI GI: 5802998
Description:

Cdc42 effector protein 2

Referenced in:

Additional Cell Cycle Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3          7           1
 C cysteine            0.5          1           1
 D aspartate           7.1         15           2
 E glutamate           5.2         11           2
 F phenylalanine       3.8          8           1
 G glycine            10.5         22           3
 H histidine           2.4          5           1
 I isoleucine          5.7         12           1
 K lysine              4.3          9           2
 L leucine            12.4         26           2
 M methionine          2.9          6           1
 N asparagine          1.4          3           1
 P proline            11.9         25           2
 Q glutamine           4.3          9           1
 R arginine            3.8          8           1
 S serine             10.0         21           2
 T threonine           6.2         13           1
 V valine              3.3          7           1
 W tryptophan          0.5          1           1
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Cdc42 effector protein 2 
CDC42EP3              0.300   Cdc42 effector protein 3 
CDC42EP1              0.134   CDC42 effector protein 1 
CDC42EP4              0.121   Cdc42 effector protein 4 
CDC42EP5              0.067   CDC42 effector protein 5 
C15orf62              0.030   hypothetical protein LOC643338 
FLJ22184              0.030   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.030   PREDICTED: hypothetical protein LOC80164 
TGIF2                 0.030   TGFB-induced factor homeobox 2 
FAM186A               0.027   family with sequence similarity 186, member A [Homo...
SON                   0.027   SON DNA-binding protein isoform F 
SON                   0.027   SON DNA-binding protein isoform B 
ZFHX2                 0.025   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.025   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.025   PREDICTED: zinc finger homeobox 2 
VPS37B                0.025   vacuolar protein sorting 37B 
ZMIZ1                 0.022   retinoic acid induced 17 
SP5                   0.022   Sp5 transcription factor 
FMNL2                 0.020   formin-like 2 
FLJ22184              0.020   PREDICTED: hypothetical protein FLJ22184 
SALL2                 0.020   sal-like 2 
GLTSCR1               0.020   glioma tumor suppressor candidate region gene 1 [Ho...
MAPKBP1               0.020   mitogen-activated protein kinase binding protein 1 ...
MAPKBP1               0.020   mitogen-activated protein kinase binding protein 1 ...
ZNF341                0.020   zinc finger protein 341 
C6orf132              0.017   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.017   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.017   PREDICTED: hypothetical protein LOC647024 
FMN2                  0.017   formin 2 
CDC42BPB              0.017   CDC42-binding protein kinase beta 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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