Guide to the Human Genome
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Name: C15orf62 Sequence: fasta or formatted (175aa) NCBI GI: 194394172
Description:

hypothetical protein LOC643338

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         11           2
 C cysteine            1.1          2           1
 D aspartate           4.0          7           1
 E glutamate           7.4         13           2
 F phenylalanine       4.6          8           2
 G glycine             5.1          9           2
 H histidine           1.7          3           1
 I isoleucine          1.7          3           1
 K lysine              2.9          5           1
 L leucine            13.1         23           2
 M methionine          1.1          2           1
 N asparagine          1.7          3           1
 P proline            10.9         19           3
 Q glutamine           5.1          9           1
 R arginine            9.7         17           2
 S serine             12.6         22           3
 T threonine           4.6          8           1
 V valine              2.9          5           1
 W tryptophan          1.1          2           1
 Y tyrosine            2.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC643338 
CDC42EP2              0.036   Cdc42 effector protein 2 
IL4R                  0.027   interleukin 4 receptor alpha chain isoform a precurso...
MARCH9                0.027   membrane-associated RING-CH protein IX 
LOC100292370          0.024   PREDICTED: hypothetical protein 
LOC644246             0.021   PREDICTED: hypothetical protein LOC644246 
SLC6A5                0.021   solute carrier family 6 (neurotransmitter transporte...
CDC42EP5              0.021   CDC42 effector protein 5 
ANKRD33               0.018   ankyrin repeat domain 33 isoform 1 
YLPM1                 0.018   YLP motif containing 1 
ZNF598                0.018   zinc finger protein 598 
B4GALNT4              0.015   beta 1,4-N-acetylgalactosaminyltransferase-transfera...
NACAD                 0.015   NAC alpha domain containing 
LOC100131165          0.015   PREDICTED: hypothetical protein 
NACAD                 0.015   PREDICTED: NAC alpha domain containing 
NACAD                 0.015   PREDICTED: NAC alpha domain containing 
NACAD                 0.015   PREDICTED: NAC alpha domain containing 
NACAD                 0.015   PREDICTED: NAC alpha domain containing 
RCOR3                 0.015   REST corepressor 3 isoform a 
RCOR3                 0.015   REST corepressor 3 isoform d 
PRB4                  0.015   proline-rich protein BstNI subfamily 4 precursor [Ho...
MEGF9                 0.015   multiple EGF-like-domains 9 
IGSF9B                0.015   immunoglobulin superfamily, member 9B 
LOC100292378          0.015   PREDICTED: hypothetical protein 
AATK                  0.015   apoptosis-associated tyrosine kinase 
LOC100293693          0.012   PREDICTED: hypothetical protein 
LOC401180             0.012   PREDICTED: similar to hCG1745223 
LOC100289875          0.012   PREDICTED: hypothetical protein XP_002346829 
LOC401180             0.012   PREDICTED: similar to hCG1745223 
LOC100288993          0.012   PREDICTED: hypothetical protein XP_002342967 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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