Guide to the Human Genome
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Name: BRUNOL5 Sequence: fasta or formatted (320aa) NCBI GI: 225579097
Description:

bruno-like 5, RNA binding protein isoform 2

Referenced in:

RNA-binding Proteins

Other entries for this name:
alt prot [485aa] bruno-like 5, RNA binding protein isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         31           2
 C cysteine            0.9          3           1
 D aspartate           2.8          9           1
 E glutamate           3.4         11           2
 F phenylalanine       4.1         13           1
 G glycine             8.8         28           2
 H histidine           3.1         10           1
 I isoleucine          3.1         10           1
 K lysine              2.2          7           1
 L leucine             9.4         30           2
 M methionine          2.2          7           1
 N asparagine          1.2          4           1
 P proline            10.0         32           3
 Q glutamine           8.4         27           4
 R arginine            4.4         14           2
 S serine              8.4         27           3
 T threonine           6.6         21           2
 V valine              7.8         25           2
 W tryptophan          0.3          1           1
 Y tyrosine            3.1         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bruno-like 5, RNA binding protein isoform 2 
BRUNOL5               0.871   bruno-like 5, RNA binding protein isoform 1 
BRUNOL4               0.532   bruno-like 4, RNA binding protein isoform 4 
BRUNOL4               0.531   bruno-like 4, RNA binding protein isoform 1 
BRUNOL4               0.523   bruno-like 4, RNA binding protein isoform 2 
BRUNOL4               0.519   bruno-like 4, RNA binding protein isoform 3 
TNRC4                 0.465   trinucleotide repeat containing 4 
BRUNOL6               0.427   bruno-like 6, RNA binding protein 
CUGBP2                0.197   CUG triplet repeat, RNA binding protein 2 isoform 3 ...
CUGBP2                0.192   CUG triplet repeat, RNA binding protein 2 isoform 1 ...
CUGBP2                0.192   CUG triplet repeat, RNA binding protein 2 isoform 2...
CUGBP2                0.190   CUG triplet repeat, RNA binding protein 2 isoform 4...
CUGBP1                0.176   CUG triplet repeat, RNA-binding protein 1 isoform 3 ...
CUGBP1                0.168   CUG triplet repeat, RNA-binding protein 1 isoform 1 [...
CUGBP1                0.168   CUG triplet repeat, RNA-binding protein 1 isoform 2 ...
ELAVL2                0.055   ELAV (embryonic lethal, abnormal vision, Drosophila...
SF3B4                 0.053   splicing factor 3b, subunit 4 
ELAVL3                0.048   ELAV-like protein 3 isoform 1 
ELAVL3                0.048   ELAV-like protein 3 isoform 2 
ELAVL1                0.045   ELAV-like 1 
ELAVL4                0.044   ELAV-like 4 isoform 1 
ELAVL4                0.044   ELAV-like 4 isoform 5 
ELAVL4                0.044   ELAV-like 4 isoform 4 
ELAVL4                0.044   ELAV-like 4 isoform 3 
ELAVL4                0.044   ELAV-like 4 isoform 2 
RBMS1                 0.044   RNA binding motif, single stranded interacting protei...
RBMS1                 0.040   RNA binding motif, single stranded interacting protei...
TIA1                  0.039   TIA1 protein isoform 1 
RBMS3                 0.039   RNA binding motif, single stranded interacting prote...
RBMS3                 0.039   RNA binding motif, single stranded interacting prote...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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