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Search of human proteins with 57242766
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|57242766 hypothetical protein LOC168455 [Homo sapiens]
(235 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57242766 hypothetical protein LOC168455 [Homo sapiens] 479 e-136
gi|153791662 coiled-coil domain containing 71 [Homo sapiens] 65 4e-11
gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo sapi... 52 6e-07
gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo sapi... 52 6e-07
gi|13273315 homeobox B4 [Homo sapiens] 44 1e-04
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [... 44 2e-04
gi|169163027 PREDICTED: similar to Putative acrosin-like proteas... 43 2e-04
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 43 2e-04
gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens] 43 2e-04
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 43 2e-04
gi|148613878 acrosin precursor [Homo sapiens] 43 3e-04
gi|226498192 atonal homolog 8 [Homo sapiens] 42 3e-04
gi|40353727 synaptopodin isoform A [Homo sapiens] 42 3e-04
gi|47132519 Ras association and pleckstrin homology domains 1 is... 42 5e-04
gi|150170670 piccolo isoform 2 [Homo sapiens] 42 5e-04
gi|150378539 piccolo isoform 1 [Homo sapiens] 42 5e-04
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 42 5e-04
gi|153251792 hypothetical protein LOC54854 [Homo sapiens] 42 5e-04
gi|38788260 bromodomain PHD finger transcription factor isoform ... 42 6e-04
gi|38788274 bromodomain PHD finger transcription factor isoform ... 42 6e-04
gi|39812378 RAN binding protein 9 [Homo sapiens] 41 8e-04
gi|157168329 formin 1 [Homo sapiens] 41 0.001
gi|46249414 latent transforming growth factor beta binding prote... 41 0.001
gi|169207534 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ... 41 0.001
gi|110431370 espin [Homo sapiens] 41 0.001
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens] 40 0.001
gi|239750101 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 40 0.001
>gi|57242766 hypothetical protein LOC168455 [Homo sapiens]
Length = 235
Score = 479 bits (1233), Expect = e-136
Identities = 235/235 (100%), Positives = 235/235 (100%)
Query: 1 MRRSMKRRRRRRPVAPATAARGGDFRAEDGAGLEAREEKVVYSRSQLSLADSTKALGDAF 60
MRRSMKRRRRRRPVAPATAARGGDFRAEDGAGLEAREEKVVYSRSQLSLADSTKALGDAF
Sbjct: 1 MRRSMKRRRRRRPVAPATAARGGDFRAEDGAGLEAREEKVVYSRSQLSLADSTKALGDAF 60
Query: 61 KLFMPRSTEFMSSDAELWSFLCSLKHQFSPHILRSKDVYGYSSCRALVPDPPGPPTARGQ 120
KLFMPRSTEFMSSDAELWSFLCSLKHQFSPHILRSKDVYGYSSCRALVPDPPGPPTARGQ
Sbjct: 61 KLFMPRSTEFMSSDAELWSFLCSLKHQFSPHILRSKDVYGYSSCRALVPDPPGPPTARGQ 120
Query: 121 ARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESCPAKPVAPGPCFGGRTLEEI 180
ARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESCPAKPVAPGPCFGGRTLEEI
Sbjct: 121 ARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESCPAKPVAPGPCFGGRTLEEI 180
Query: 181 WRAATPTLTTFPTIRVGSDVWGERSLAAARRRARQVLRVNLEPMVRLRRFPVPRA 235
WRAATPTLTTFPTIRVGSDVWGERSLAAARRRARQVLRVNLEPMVRLRRFPVPRA
Sbjct: 181 WRAATPTLTTFPTIRVGSDVWGERSLAAARRRARQVLRVNLEPMVRLRRFPVPRA 235
>gi|153791662 coiled-coil domain containing 71 [Homo sapiens]
Length = 467
Score = 65.5 bits (158), Expect = 4e-11
Identities = 48/128 (37%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 37 EEKVVYSRSQLSLADSTKALGDAFKLFMPRSTEFMSSDAELWSFLCSLKHQ-FSPHILRS 95
EEK V+S S++S A KAL +A +F P S + +++A+L +FL L+ F P ILRS
Sbjct: 9 EEKAVHSWSRISTAGK-KALEEALLVFNPMSQDLSATEAQLVAFLQGLRDDGFQPTILRS 67
Query: 96 KDVYGYSSCRALVPDPPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPP 155
DVYGYSSC A +PP + +A P + R A A R P P
Sbjct: 68 GDVYGYSSCTA---NPPSQTKLQARAPNPTATSPPASAPRTAMRLPAGRATLLPMPLSGR 124
Query: 156 PPEESCPA 163
+ S PA
Sbjct: 125 LAKASTPA 132
Score = 36.6 bits (83), Expect = 0.019
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 18/116 (15%)
Query: 115 PTARGQARRPVPRAAARRRRRGA--RAAAARRRKPRPPPPPPPPPEESCPAKPVAPGPCF 172
P RG RP A AR R+G R +++ R PP++ P +P
Sbjct: 360 PRGRG---RPKGSAKARTTRKGQKNRPETVGQKRKRAEEAKDLPPKKRTRLGPRSPKAWL 416
Query: 173 GGRTLEEIWRAATPTLTTFPTIRVGSDVWGERSLAAARRRARQVLRVNLEPMVRLR 228
G T L F I+V S R+RA+++LRVNL P++RL+
Sbjct: 417 G---------PGTAKLLKFRAIKVDR----RSSDDEVRQRAQRILRVNLSPVIRLQ 459
>gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo
sapiens]
Length = 678
Score = 51.6 bits (122), Expect = 6e-07
Identities = 35/95 (36%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 93 LRSKDVYGYSSCRALVPDPPGPPTARGQARRPV-----PRAAARRRRRGARAAAARRR-- 145
LR+ V + P PP P A+ +A + P +R R AA RRR
Sbjct: 31 LRADSVLIIETVPGFPPAPPAPGAAQIRAAEVLVYGAPPGRVSRLLERFDPPAAPRRRGS 90
Query: 146 --KPRPPPPPPPP----PEESCPAKPVAPGPCFGG 174
+ RPPPPPPPP P + P+ P APGP GG
Sbjct: 91 PERARPPPPPPPPAPPRPPPAAPSPPAAPGPRGGG 125
>gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo
sapiens]
Length = 650
Score = 51.6 bits (122), Expect = 6e-07
Identities = 35/95 (36%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 93 LRSKDVYGYSSCRALVPDPPGPPTARGQARRPV-----PRAAARRRRRGARAAAARRR-- 145
LR+ V + P PP P A+ +A + P +R R AA RRR
Sbjct: 31 LRADSVLIIETVPGFPPAPPAPGAAQIRAAEVLVYGAPPGRVSRLLERFDPPAAPRRRGS 90
Query: 146 --KPRPPPPPPPP----PEESCPAKPVAPGPCFGG 174
+ RPPPPPPPP P + P+ P APGP GG
Sbjct: 91 PERARPPPPPPPPAPPRPPPAAPSPPAAPGPRGGG 125
>gi|13273315 homeobox B4 [Homo sapiens]
Length = 251
Score = 43.9 bits (102), Expect = 1e-04
Identities = 33/83 (39%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 101 YSSCRALVPDPPGPPTARGQARRPVPRAAARRRRRGA----RAAAARRRKPRPPPPPPPP 156
YS L D A GQ R + A RR A R AA R P PPPPPPPP
Sbjct: 23 YSQSDYLPSDHSPGYYAGGQRRESSFQPEAGFGRRAACTVQRYAACRDPGPPPPPPPPPP 82
Query: 157 PEESCPAKPVAPGPCFGGRTLEE 179
P P AP P G L E
Sbjct: 83 PPPPPGLSPRAPAPPPAGALLPE 105
Score = 32.3 bits (72), Expect = 0.36
Identities = 25/79 (31%), Positives = 29/79 (36%), Gaps = 15/79 (18%)
Query: 98 VYGYSSCR------ALVPDPPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPP 151
V Y++CR P PP PP R P P A GA +R
Sbjct: 62 VQRYAACRDPGPPPPPPPPPPPPPPPGLSPRAPAPPPA------GALLPEPGQRCEAVSS 115
Query: 152 PPPPPPEESCPAKPVAPGP 170
PPPPP C P+ P P
Sbjct: 116 SPPPPP---CAQNPLHPSP 131
>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 43.5 bits (101), Expect = 2e-04
Identities = 37/84 (44%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 103 SCRALVPDPP-----GPPTAR-GQARRPVPRAAAR--------RRRRGARAAAARRRKP- 147
SCRA P P GP TA G+ R AAAR RR G+ AA A R
Sbjct: 68 SCRARCPSPAAGGLRGPWTAAPGRQRADEGAAAARPERQRVWARRLPGSAAAPAPGRDAL 127
Query: 148 RPPPPPPPPPEE-SCPAKPVAPGP 170
R PPPPPPPPE P +A GP
Sbjct: 128 RLPPPPPPPPERPRLPPAGLAGGP 151
Score = 29.3 bits (64), Expect = 3.1
Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 8/68 (11%)
Query: 112 PGPPTARGQAR-RPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEES-------CPA 163
P + R Q R R P + RR R P PP P PP P E PA
Sbjct: 2 PNKASGRRQGRARGRPHSQVSLARRAPLMFGPGLRDPPPPRPAPPRPGEEPGNRHPPPPA 61
Query: 164 KPVAPGPC 171
PG C
Sbjct: 62 ARTHPGSC 69
>gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [Homo
sapiens]
Length = 1584
Score = 43.5 bits (101), Expect = 2e-04
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 120 QARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESCPAKP-VAPGPCFGGRTLE 178
+A P +R+ G A + P PPPPPPPPP++ P P + P P G E
Sbjct: 1385 EASLPARSPPSRQPPSGGPPEAPPAQPPPPPPPPPPPPQQPLPPPPNLEPAPPSLGDPGE 1444
Query: 179 EIWRAATPTLTTFPTIRVGSDVWGERSLAAARRRARQVLRVNLEPMVRLRR 229
AA P +T P+ + ++ S+++ RR + ++ E ++ R+
Sbjct: 1445 P---AAHPGPSTGPSTK--NENVATLSVSSLERRKSRYAELDFEKIMHTRK 1490
>gi|169163027 PREDICTED: similar to Putative acrosin-like protease
[Homo sapiens]
Length = 355
Score = 43.1 bits (100), Expect = 2e-04
Identities = 29/81 (35%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
Query: 100 GYSSCRALVPDPPGPPTARGQARRPV---PRAA-------ARRRRRGARAAAARRRKPRP 149
G ++ R + P PPT R RP P +A R R AA+ R P
Sbjct: 224 GSNALRMIQSATPPPPTTRPPPIRPPFSHPLSAHLPWYFQPPPRPLPPRPPAAQPRPPPS 283
Query: 150 PPPPPPPPEESCPAKPVAPGP 170
PPPPPPPP P P P P
Sbjct: 284 PPPPPPPPPSPLPPPPPPPPP 304
Score = 33.5 bits (75), Expect = 0.16
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 12/56 (21%)
Query: 109 PDPPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESCPAK 164
P PP PP A+ RP P P PPPPPPPPP S K
Sbjct: 268 PLPPRPPAAQP---RPPPSPPP---------PPPPPPSPLPPPPPPPPPTPSSTTK 311
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 43.1 bits (100), Expect = 2e-04
Identities = 27/63 (42%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Query: 106 ALVPDPPGPPTARGQARRPVPRAAARR---RRRGARAAAARRRKPRPPPPPPPPPEESCP 162
A VP PP PT PVP RR R R + R P PPP PPPPP S P
Sbjct: 578 APVPSPPRAPTPPST---PVPLPEKRRSILREPTFRWTSLTRELPPPPPAPPPPPAPSPP 634
Query: 163 AKP 165
P
Sbjct: 635 PAP 637
Score = 36.6 bits (83), Expect = 0.019
Identities = 33/115 (28%), Positives = 41/115 (35%), Gaps = 20/115 (17%)
Query: 92 ILRSKDVYGYSSCRALVPDPPGPPTARGQARRPVPRAAARR----RRRGARAAAARRR-- 145
ILR S R L P PP PP + P P ++RR R + A +
Sbjct: 603 ILREPTFRWTSLTRELPPPPPAPPPPPAPSPPPAPATSSRRPLLLRAPQFTPSEAHLKIY 662
Query: 146 ----------KPRPPPPPPPPPEESCPAKPVAPGPCFGGRTLEEIWRAATPTLTT 190
P P P PPP ++S P P P GRT P +TT
Sbjct: 663 ESVLTPPPLGAPEAPEPEPPPADDS----PAEPEPRAVGRTNHLSLPRFAPVVTT 713
Score = 33.5 bits (75), Expect = 0.16
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 147 PRPPPPPPPPPEESCPAKPVAPGP 170
P P PPPP PP + P P+ P P
Sbjct: 409 PAPSPPPPLPPPSTSPPPPLCPPP 432
Score = 32.7 bits (73), Expect = 0.28
Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 14/79 (17%)
Query: 105 RALVPDPPG-----PPTARGQARRPVPRAAA--RRRRRGARAAAARRRKPRPPPPPPPPP 157
RA P P P T R RP R A RR+++ A A P+P PPPP P
Sbjct: 199 RAQAPQAPRSRACEPSTPRRSRGRPPGRPAGPCRRKQQAVVVAEAAVTIPKPEPPPPVVP 258
Query: 158 EE------SCPAKPVAPGP 170
+ C P PGP
Sbjct: 259 VKHQTGSWKCKEGP-GPGP 276
Score = 31.6 bits (70), Expect = 0.62
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 124 PVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESCPAKPVAPGPCFGGRTLEEIWRA 183
P +A R +RG RA R RK + P PPP + P P P G E + +A
Sbjct: 134 PSSLRSALRSQRG-RAPRGRGRKHKTTPLPPPRLADVAPTPPKTPARKRGEEGTERMVQA 192
Query: 184 ATPTL 188
T L
Sbjct: 193 LTELL 197
Score = 30.8 bits (68), Expect = 1.1
Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Query: 149 PPPP--PPPPPEESCPAKPVAPGP 170
PPPP PPPPP S P P P P
Sbjct: 424 PPPPLCPPPPPPVSPPPLPSPPPP 447
Score = 30.4 bits (67), Expect = 1.4
Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 17/75 (22%)
Query: 108 VPDPPGPPTARGQARRP---VPRAAARRR------------RRGARAAAARRRKPRPPPP 152
+P PP PP Q P VP +R+R R ARA P P P
Sbjct: 441 LPSPPPPPAQEEQEESPPPVVPATCSRKRGRPPLTPSQRAEREAARAGPEGTSPPTPTPS 500
Query: 153 PPP--PPEESCPAKP 165
PPE+S P
Sbjct: 501 TATGGPPEDSPTVAP 515
Score = 29.6 bits (65), Expect = 2.3
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 6/30 (20%)
Query: 147 PRPPPPPPP----PPEESC--PAKPVAPGP 170
P PPPP PP PP C P PV+P P
Sbjct: 411 PSPPPPLPPPSTSPPPPLCPPPPPPVSPPP 440
Score = 29.3 bits (64), Expect = 3.1
Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 15/38 (39%)
Query: 147 PRPPPP--------PPPPP-----EESCPAKPVAPGPC 171
P PPPP PPPPP EES P PV P C
Sbjct: 430 PPPPPPVSPPPLPSPPPPPAQEEQEESPP--PVVPATC 465
Score = 29.3 bits (64), Expect = 3.1
Identities = 29/109 (26%), Positives = 39/109 (35%), Gaps = 7/109 (6%)
Query: 109 PDPPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPP----PEESCPAK 164
P PP PP P + R+ R R + R P PPP P E+
Sbjct: 2251 PAPPPPPPPLTLVLSSGPASPPRQAIRVKRVSTFSGRSPPAPPPYKAPRLDEDGEASEDT 2310
Query: 165 PVAPGPCFGGRTLEEIWRAATPTLTTFPTIRVGSDVWGERSLAAARRRA 213
P PG GG + R TPT+ + + GE S + R+
Sbjct: 2311 PQVPGLGSGGFSRV---RMKTPTVRGVLDLDRPGEPAGEESPGPLQERS 2356
Score = 28.5 bits (62), Expect = 5.2
Identities = 28/97 (28%), Positives = 34/97 (35%), Gaps = 19/97 (19%)
Query: 111 PPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPP-----------PPPPPPPEE 159
PP P + AR VP + RR G + P P P PP
Sbjct: 1853 PPPAPRSFSGARIKVPNYSPSRRPLGGVSFGPLPSPGSPSSLTHHIPTVGDPDFPAPPRR 1912
Query: 160 SCPAKPVAPGPCFGGRTLEEIWRAATPTLTTFPTIRV 196
S P+AP P R A+P L T P +RV
Sbjct: 1913 SRRPSPLAPRP--------PPSRWASPPLKTSPQLRV 1941
Score = 28.1 bits (61), Expect = 6.8
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 4/22 (18%)
Query: 148 RPPPPPPPPP----EESCPAKP 165
RP PPPPPPP S PA P
Sbjct: 2250 RPAPPPPPPPLTLVLSSGPASP 2271
Score = 27.7 bits (60), Expect = 8.9
Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 14/83 (16%)
Query: 109 PDPPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPP-PEESCPAKPVA 167
P+PP P T++ + + + G +P PPP PP P P P +
Sbjct: 2181 PEPPKPATSKIILVNKLGQVFVKMAGEG---------EPVPPPVKQPPLPPTISPTAPTS 2231
Query: 168 ----PGPCFGGRTLEEIWRAATP 186
PGP G + + R A P
Sbjct: 2232 WTLPPGPLLGVLPVVGVVRPAPP 2254
Score = 27.7 bits (60), Expect = 8.9
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 14/42 (33%)
Query: 146 KPRPPPPPPP-----------PPEESCPAKPVAPGPCFGGRT 176
+P PPPPPPP PP ++ K V+ F GR+
Sbjct: 2250 RPAPPPPPPPLTLVLSSGPASPPRQAIRVKRVS---TFSGRS 2288
>gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]
Length = 1178
Score = 43.1 bits (100), Expect = 2e-04
Identities = 27/64 (42%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 107 LVPDPPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESCPAKPV 166
L P P P + P A AR GA+A + RRR RPPPPPPPP S P
Sbjct: 8 LKPTHPAEPPPEAEE----PEADARP---GAKAPSRRRRDCRPPPPPPPPAGPSRGPLPP 60
Query: 167 APGP 170
P P
Sbjct: 61 PPPP 64
Score = 34.7 bits (78), Expect = 0.073
Identities = 28/74 (37%), Positives = 31/74 (41%), Gaps = 17/74 (22%)
Query: 109 PDPPGPPTARGQA-RRPVPRAAARRRRRGARAAAARRRKPRPPP--------PPPPPPEE 159
P P P +A RP +A +RRRR R P PPP PPPPPP
Sbjct: 13 PAEPPPEAEEPEADARPGAKAPSRRRRD------CRPPPPPPPPAGPSRGPLPPPPPPRG 66
Query: 160 SCPAKPVAPGPCFG 173
P PVA G G
Sbjct: 67 LGP--PVAGGAAAG 78
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 43.1 bits (100), Expect = 2e-04
Identities = 29/87 (33%), Positives = 35/87 (40%), Gaps = 14/87 (16%)
Query: 102 SSCRALVPDPPGPPTARGQARRPVPRAAARRR-------------RRGARAAAARRRKPR 148
++ A P PGP +A+R P AA RR A A R P
Sbjct: 152 AAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPL 211
Query: 149 PPPP-PPPPPEESCPAKPVAPGPCFGG 174
PPPP PP PP++ P P P GG
Sbjct: 212 PPPPQPPAPPQQQQPPPPQPQPPPEGG 238
Score = 37.0 bits (84), Expect = 0.015
Identities = 25/61 (40%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Query: 113 GPPTARGQARRPVPRAAAR-----RRRRGARAAAARRRKPRPPPPPPPPPEESCPAKPVA 167
G + R AR PR A R RGA AAAA P P PPPPP + A A
Sbjct: 89 GSISYRNAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARA 148
Query: 168 P 168
P
Sbjct: 149 P 149
Score = 33.5 bits (75), Expect = 0.16
Identities = 25/73 (34%), Positives = 28/73 (38%), Gaps = 12/73 (16%)
Query: 102 SSCRALVPDPPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPP----- 156
++ A P P PP P P AAA R AAAA P P P P P
Sbjct: 121 AAAAAAPPPTPAPPPP------PAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRA 174
Query: 157 -PEESCPAKPVAP 168
P + P P AP
Sbjct: 175 APLAAPPPAPAAP 187
Score = 29.3 bits (64), Expect = 3.1
Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 13/71 (18%)
Query: 111 PPGPPTARGQARRPVPRA--------AARRRRRGARAAAARRRKPRPPPPPPPPPEESCP 162
P GP + + R P P + AA + G + A P P P PP P
Sbjct: 382 PCGPHQGQDEGRGPAPGSGTRQVFSMAAMNKEGGTASVATGPDSPSPVPLPP-----GKP 436
Query: 163 AKPVAPGPCFG 173
A P A G FG
Sbjct: 437 ALPGADGTPFG 447
>gi|148613878 acrosin precursor [Homo sapiens]
Length = 421
Score = 42.7 bits (99), Expect = 3e-04
Identities = 29/81 (35%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
Query: 100 GYSSCRALVPDPPGPPTARGQARRPV---PRAA-------ARRRRRGARAAAARRRKPRP 149
G ++ R + P PPT R RP P +A R R AA+ R P
Sbjct: 290 GSNALRMIQSATPPPPTTRPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPRPPPS 349
Query: 150 PPPPPPPPEESCPAKPVAPGP 170
PPPPPPPP P P P P
Sbjct: 350 PPPPPPPPASPLPPPPPPPPP 370
Score = 33.9 bits (76), Expect = 0.12
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 12/56 (21%)
Query: 109 PDPPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESCPAK 164
P PP PP A+ RP P P PPPPPPPPP S K
Sbjct: 334 PLPPRPPAAQP---RPPPSPPP---------PPPPPASPLPPPPPPPPPTPSSTTK 377
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 42.4 bits (98), Expect = 3e-04
Identities = 26/68 (38%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 108 VPDPPGPPTARGQARRPVPRAAARRRRRGAR-----AAAARRRKPRPPPPPPPPPEESC- 161
+P PP PP Q++ P A R G R A R P PP PP PPE +
Sbjct: 121 LPTPPPPPPPAPQSQAPGGPEAQPFREPGLRPRILLCAPPARPAPSAPPAPPAPPESTVR 180
Query: 162 PAKPVAPG 169
PA P PG
Sbjct: 181 PAPPTRPG 188
Score = 38.5 bits (88), Expect = 0.005
Identities = 25/62 (40%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 108 VPDPPGPPTA--RGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESCPAKP 165
VP G TA RG +R P A R+R A P PPPPPPP P+ P P
Sbjct: 84 VPPRGGTDTAGERGGSRAPEVSDA---RKRCFALGAVGPGLPTPPPPPPPAPQSQAPGGP 140
Query: 166 VA 167
A
Sbjct: 141 EA 142
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 42.4 bits (98), Expect = 3e-04
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 7/48 (14%)
Query: 129 AARRRRRGARAAAARR-------RKPRPPPPPPPPPEESCPAKPVAPG 169
AARR+ R+A A R P PPPPPPPPP +P PG
Sbjct: 764 AARRKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARPG 811
Score = 30.4 bits (67), Expect = 1.4
Identities = 30/102 (29%), Positives = 38/102 (37%), Gaps = 9/102 (8%)
Query: 111 PPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPP--PPPPPPEESCPAKPVAP 168
P P A + PR + R G A R P PP P P S V+P
Sbjct: 647 PVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRRESLPTSPPWTPGASRPPSSLDGW-VSP 705
Query: 169 GPCFGGRTLEEIWRAATPTLTTFPTIRVGSDVWGERSLAAAR 210
GP GR ++ P L P + S W ERS++ R
Sbjct: 706 GPWEPGRGSS---MSSPPPLPPPPPM---SPSWSERSVSPLR 741
Score = 28.5 bits (62), Expect = 5.2
Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 9/83 (10%)
Query: 89 SPHILRSKDVYGYSSCRALVPDPPGPPTARGQARRPVPRAAARRRRR-GARAAAARRRKP 147
SP +++ +S RA P PP PP P PR + + R G+ A P
Sbjct: 771 SPRSAGAENPRPFSPPRAPPPPPPPPP--------PPPRMRSPQPARPGSAAVPGAAFAP 822
Query: 148 RPPPPPPPPPEESCPAKPVAPGP 170
P P P P + P P
Sbjct: 823 IPRSPLPAGPSSCTSPRSPLPAP 845
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 42.0 bits (97), Expect = 5e-04
Identities = 27/81 (33%), Positives = 32/81 (39%), Gaps = 25/81 (30%)
Query: 109 PDPPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPR-------------PPPPP-- 153
P PP PP Q +PVP A ++ A + KP+ PPPPP
Sbjct: 870 PPPPTPPAMESQPLKPVPANVA------PQSPPAVKAKPKWQPSSIPVPSPDFPPPPPES 923
Query: 154 ----PPPPEESCPAKPVAPGP 170
PPPP PA P P P
Sbjct: 924 SLVFPPPPPSPVPAPPPPPPP 944
Score = 36.6 bits (83), Expect = 0.019
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 141 AARRRKPRPPPPPPPPPEESCPAKPVAPGP 170
A++ P PPPPPPPPP P P P P
Sbjct: 621 ASQPSPPLPPPPPPPPPPPPPPPPPPPPLP 650
Score = 35.8 bits (81), Expect = 0.033
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 13/61 (21%)
Query: 111 PPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESCPAKPVAPGP 170
PP PP + Q+ +P + PPPPPPPPP + P P
Sbjct: 686 PPTPPVMQSQSVKP-------------QILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAP 732
Query: 171 C 171
C
Sbjct: 733 C 733
Score = 35.4 bits (80), Expect = 0.043
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 9/48 (18%)
Query: 147 PRPPPPPPPPPEESCPAKPVAPGPCFGGRTLEEIWRAATPTLTTFPTI 194
P PPPPPPPPP P P P G +A P + TI
Sbjct: 632 PPPPPPPPPPPPPPPPPLPSQSAPSAG---------SAAPMFVKYSTI 670
Score = 32.7 bits (73), Expect = 0.28
Identities = 36/137 (26%), Positives = 53/137 (38%), Gaps = 27/137 (19%)
Query: 50 ADSTKALGDAFKLFMPRSTEFMSSDAELWSFLCSLKHQFSPHILRSKDVYGYSSC--RAL 107
+ S + G A +F+ ST +A S +L +P +++S+ V +
Sbjct: 651 SQSAPSAGSAAPMFVKYSTITRLQNASQHSG--ALFKPPTPPVMQSQSVKPQILVPPNGV 708
Query: 108 VPDPPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPP--------------- 152
VP PP PP P P +A + + A A + + PPPP
Sbjct: 709 VPPPPPPPPP------PTP-GSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPP 761
Query: 153 -PPPPPEESCPAKPVAP 168
PPPPP P P AP
Sbjct: 762 TPPPPPPIPAPLPPQAP 778
Score = 32.7 bits (73), Expect = 0.28
Identities = 28/96 (29%), Positives = 36/96 (37%), Gaps = 15/96 (15%)
Query: 109 PDPPGPPTARGQAR---RPVPRAAARRRRRGA-------RAAAARRRKPRPPPPPPP--- 155
P PP PP G A +P P A + + + + P PPPPPP
Sbjct: 712 PPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIPA 771
Query: 156 PPEESCPAKPVA--PGPCFGGRTLEEIWRAATPTLT 189
P P KP+ P P + +AA PT T
Sbjct: 772 PLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPT 807
Score = 30.4 bits (67), Expect = 1.4
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 5/37 (13%)
Query: 149 PPPP-----PPPPPEESCPAKPVAPGPCFGGRTLEEI 180
P PP PPPPPE P P+ F G T ++
Sbjct: 1065 PSPPSDSDFPPPPPETELPLPPIEIPAVFSGNTSPKV 1101
Score = 28.5 bits (62), Expect = 5.2
Identities = 22/89 (24%), Positives = 31/89 (34%), Gaps = 32/89 (35%)
Query: 109 PDPPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPP--------------PPP 154
P PP PPTA P P + ++ ++ ++ +KP P P P P
Sbjct: 938 PPPPPPPTAS-----PTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPEP 992
Query: 155 -------------PPPEESCPAKPVAPGP 170
PP E P+K P P
Sbjct: 993 KRPSVDSLVSKFTPPAESGSPSKETLPPP 1021
Score = 27.7 bits (60), Expect = 8.9
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Query: 109 PDPPGPPTARGQAR-RPVPRAAARRRRRGARAAAARRRKPRPPPP-PPPPPEESCPAKPV 166
P PP P QA +P+ A + + P P PP PP + + PA +
Sbjct: 765 PPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYI 824
Query: 167 APGP 170
P P
Sbjct: 825 PPSP 828
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 42.0 bits (97), Expect = 5e-04
Identities = 38/146 (26%), Positives = 53/146 (36%), Gaps = 21/146 (14%)
Query: 84 LKHQFSPHILRSKDVYGYSSCRALVPDPPGPPTARGQARRPVPRAAARRRRRGARAAAAR 143
+K Q S S + +G + +P G P+ +P P R + +
Sbjct: 2352 MKEQLSTTYFTSGETFGQEKPASQLPS--GSPSVSSLPAKPRPFF------RSSSLDISA 2403
Query: 144 RRKPRPPPPPPPPPEESCPAKPVAPGPCFGGRTLEEIWRAATPTLTTFPTIRVGSDVWGE 203
+ P PPPPPPPPP P P P P + PT+ + V S V
Sbjct: 2404 QPPPPPPPPPPPPPPPPPPPPPPLPPP-----------TSPKPTILPKKKLTVASPVTTA 2452
Query: 204 RSL--AAARRRARQVLRVNLEPMVRL 227
L A VLR N P+ R+
Sbjct: 2453 TPLFDAVTTLETTAVLRSNGLPVTRI 2478
Score = 33.9 bits (76), Expect = 0.12
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Query: 111 PPGP------PTARGQ---ARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESC 161
PPG PT Q A+ P+ R A+R + + A KP P P PP ++
Sbjct: 251 PPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPT 310
Query: 162 PAKPVAPGP 170
P KP A P
Sbjct: 311 PGKPPAQQP 319
Score = 31.6 bits (70), Expect = 0.62
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Query: 109 PDPPGPPTARGQARRPVPRAAARR---RRRGARAAAARRRKPRPPP-----PPPPPPEES 160
P P A G + PV + + ++ G +A++ P PP P PPP++
Sbjct: 425 PGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQP 484
Query: 161 CPAKPVAPGP 170
PAKP P
Sbjct: 485 GPAKPPPQQP 494
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 42.0 bits (97), Expect = 5e-04
Identities = 38/146 (26%), Positives = 53/146 (36%), Gaps = 21/146 (14%)
Query: 84 LKHQFSPHILRSKDVYGYSSCRALVPDPPGPPTARGQARRPVPRAAARRRRRGARAAAAR 143
+K Q S S + +G + +P G P+ +P P R + +
Sbjct: 2352 MKEQLSTTYFTSGETFGQEKPASQLPS--GSPSVSSLPAKPRPFF------RSSSLDISA 2403
Query: 144 RRKPRPPPPPPPPPEESCPAKPVAPGPCFGGRTLEEIWRAATPTLTTFPTIRVGSDVWGE 203
+ P PPPPPPPPP P P P P + PT+ + V S V
Sbjct: 2404 QPPPPPPPPPPPPPPPPPPPPPPLPPP-----------TSPKPTILPKKKLTVASPVTTA 2452
Query: 204 RSL--AAARRRARQVLRVNLEPMVRL 227
L A VLR N P+ R+
Sbjct: 2453 TPLFDAVTTLETTAVLRSNGLPVTRI 2478
Score = 33.9 bits (76), Expect = 0.12
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Query: 111 PPGP------PTARGQ---ARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESC 161
PPG PT Q A+ P+ R A+R + + A KP P P PP ++
Sbjct: 251 PPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPT 310
Query: 162 PAKPVAPGP 170
P KP A P
Sbjct: 311 PGKPPAQQP 319
Score = 31.6 bits (70), Expect = 0.62
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Query: 109 PDPPGPPTARGQARRPVPRAAARR---RRRGARAAAARRRKPRPPP-----PPPPPPEES 160
P P A G + PV + + ++ G +A++ P PP P PPP++
Sbjct: 425 PGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQP 484
Query: 161 CPAKPVAPGP 170
PAKP P
Sbjct: 485 GPAKPPPQQP 494
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 42.0 bits (97), Expect = 5e-04
Identities = 26/63 (41%), Positives = 26/63 (41%), Gaps = 6/63 (9%)
Query: 111 PPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPP---PPPEESCPAKPVA 167
PPGPP G A P P AA R R R PPPPPP P PE P
Sbjct: 720 PPGPP---GPAAPPAPSPAAPVRTRRRRKLYELHAAGAPPPPPPGHAPAPESPRPGSGSG 776
Query: 168 PGP 170
GP
Sbjct: 777 SGP 779
Score = 37.0 bits (84), Expect = 0.015
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 115 PTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESCPAKPVAPGP 170
P RG + P P A+ + RG R + PPP PPP P + A P P P
Sbjct: 895 PADRGPSPAPAPAASPQPGSRGPRDGLGPEPQ-EPPPGPPPSPAAAPEAVPPPPAP 949
Score = 30.0 bits (66), Expect = 1.8
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 133 RRRGARAAAARRRKPRPPPPPPPPPEESCPAKP-VAPGPCFGGRTLEEIWRAATP 186
RR A AARR K P P PP + + P P +PGP G E AATP
Sbjct: 603 RRAPEDAPAARRPKAPPGPARAPPGQPAEPDAPRSSPGP---GAREEGAGGAATP 654
Score = 28.5 bits (62), Expect = 5.2
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 8/45 (17%)
Query: 147 PRPPPPPPPPPEESCPAKPVAPGPCFGGRT-----LEEIWRAATP 186
PR P PP PP PA P AP P RT L E+ A P
Sbjct: 714 PRRPAAPPGPPG---PAAPPAPSPAAPVRTRRRRKLYELHAAGAP 755
>gi|153251792 hypothetical protein LOC54854 [Homo sapiens]
Length = 478
Score = 42.0 bits (97), Expect = 5e-04
Identities = 46/183 (25%), Positives = 68/183 (37%), Gaps = 26/183 (14%)
Query: 24 DFRAEDGAGLEAREEKVVYS--RSQLSLADSTKALGDAFKLFMPRSTEFMSSDAELWSFL 81
D R G ++R + V R + L D + + ++ F SDA L L
Sbjct: 214 DVRVVRGCSFQSRWRRQVSGTVREKFVLLDGERVISGSYS--------FTWSDARLHRGL 265
Query: 82 CSLKHQFSPHILRSKDVYGYSSCRALVPDPPGPPTARGQARRPVPRAAARRRRRGARAAA 141
+L + I+ + + + A P PP PP ++P +R R R +
Sbjct: 266 VTL---LTGEIVDAFSLEFRTLYAASCPLPPAPP------QKPSVIGGLQRGRSPHRVSR 316
Query: 142 ARRRKPRPPPPPPPPPEE---SCPAKPVAPGPCFGGRTLEEIWRAATPTLTTFPTIRVGS 198
R P PPPP P +C P PGP L + RA TP + P R
Sbjct: 317 RRSVAPASPPPPDGPLAHRLAACRVSPATPGPALSD-ILRSVQRARTP---SGPPARPSR 372
Query: 199 DVW 201
+W
Sbjct: 373 SMW 375
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 41.6 bits (96), Expect = 6e-04
Identities = 29/87 (33%), Positives = 35/87 (40%), Gaps = 18/87 (20%)
Query: 104 CRALVPDPPGPPTA--------------RGQARRPVPRAAARRRRRGARAAAARRRKPRP 149
C P PP PPT+ RG+ A + R R ++ RRKP P
Sbjct: 20 CAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPRGGSSSRRKPPP 79
Query: 150 PPPPPPPPEESCPAKPVAPGPCFGGRT 176
P PP PP S P + G GGRT
Sbjct: 80 P--PPAPPSTSAPGRGGRGGG--GGRT 102
Score = 33.9 bits (76), Expect = 0.12
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 9/39 (23%)
Query: 118 RGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPP 156
RG+ RP + AA AA R P PPPPPPPP
Sbjct: 2 RGRRGRPPKQPAA---------PAAERCAPAPPPPPPPP 31
Score = 32.3 bits (72), Expect = 0.36
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 131 RRRRRGARAAAARRRKPRPPPPPPPPPEESCP 162
RR R + AA + P PPPPPPP S P
Sbjct: 4 RRGRPPKQPAAPAAERCAPAPPPPPPPPTSGP 35
Score = 28.9 bits (63), Expect = 4.0
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 143 RRRKPRPPPPPPPPPEESC-PAKPVAPGPCFGG 174
R R+ RPP P P E C PA P P P G
Sbjct: 2 RGRRGRPPKQPAAPAAERCAPAPPPPPPPPTSG 34
Score = 28.1 bits (61), Expect = 6.8
Identities = 9/11 (81%), Positives = 9/11 (81%)
Query: 147 PRPPPPPPPPP 157
P PPP PPPPP
Sbjct: 2664 PAPPPSPPPPP 2674
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 41.6 bits (96), Expect = 6e-04
Identities = 29/87 (33%), Positives = 35/87 (40%), Gaps = 18/87 (20%)
Query: 104 CRALVPDPPGPPTA--------------RGQARRPVPRAAARRRRRGARAAAARRRKPRP 149
C P PP PPT+ RG+ A + R R ++ RRKP P
Sbjct: 20 CAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPRGGSSSRRKPPP 79
Query: 150 PPPPPPPPEESCPAKPVAPGPCFGGRT 176
P PP PP S P + G GGRT
Sbjct: 80 P--PPAPPSTSAPGRGGRGGG--GGRT 102
Score = 33.9 bits (76), Expect = 0.12
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 9/39 (23%)
Query: 118 RGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPP 156
RG+ RP + AA AA R P PPPPPPPP
Sbjct: 2 RGRRGRPPKQPAA---------PAAERCAPAPPPPPPPP 31
Score = 32.3 bits (72), Expect = 0.36
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 131 RRRRRGARAAAARRRKPRPPPPPPPPPEESCP 162
RR R + AA + P PPPPPPP S P
Sbjct: 4 RRGRPPKQPAAPAAERCAPAPPPPPPPPTSGP 35
Score = 28.9 bits (63), Expect = 4.0
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 143 RRRKPRPPPPPPPPPEESC-PAKPVAPGPCFGG 174
R R+ RPP P P E C PA P P P G
Sbjct: 2 RGRRGRPPKQPAAPAAERCAPAPPPPPPPPTSG 34
Score = 28.1 bits (61), Expect = 6.8
Identities = 9/11 (81%), Positives = 9/11 (81%)
Query: 147 PRPPPPPPPPP 157
P PPP PPPPP
Sbjct: 2681 PAPPPSPPPPP 2691
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 41.2 bits (95), Expect = 8e-04
Identities = 42/144 (29%), Positives = 51/144 (35%), Gaps = 30/144 (20%)
Query: 111 PPGPPTARGQARRPVPRAAARRRRRGARAAAA----------RRRKPRPPPPPPPPPEES 160
P P + G + P A GA AAA P PPPPPPPPP +
Sbjct: 36 PAPPAVSAGSSPAGSPGGGAGGEGLGAAAAALLLHPPPPPPPATAAPPPPPPPPPPPASA 95
Query: 161 C------PAKP---VAPGPCFGGRTLEEIWRAATPTLTTFPTIRVGSDVWGERSLAAARR 211
PA P PGP G T + A + FP G E+ RR
Sbjct: 96 AAPASGPPAPPGLAAGPGPAGGAPTPALV--AGSSAAAPFPH---GDSALNEQEKELQRR 150
Query: 212 RARQVLRVNLEPMVRLRRFPVPRA 235
R L P V + P+PR+
Sbjct: 151 LKR------LYPAVDEQETPLPRS 168
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 40.8 bits (94), Expect = 0.001
Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 9/69 (13%)
Query: 102 SSCRALVPDPPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESC 161
S +L P PP PP + G P P + PPPPPPPPP +
Sbjct: 660 SGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAG---------PPPPPPPPPLPNS 710
Query: 162 PAKPVAPGP 170
PA P GP
Sbjct: 711 PAPPNPGGP 719
Score = 31.6 bits (70), Expect = 0.62
Identities = 25/80 (31%), Positives = 28/80 (35%), Gaps = 38/80 (47%)
Query: 109 PDPPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPP---PPPPP-------- 157
P PP PP P+P + A G P PPPP PPPPP
Sbjct: 699 PPPPPPP--------PLPNSPAPPNPGGP--------PPAPPPPGLAPPPPPGLFFGLGS 742
Query: 158 -----------EESCPAKPV 166
E SCP KP+
Sbjct: 743 SSSQCPRKPAIEPSCPMKPL 762
Score = 29.6 bits (65), Expect = 2.3
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 8/36 (22%)
Query: 141 AARRRKPRPPPP---PPPPPEES-----CPAKPVAP 168
A+ ++K PPPP PPPPP S PA P+ P
Sbjct: 638 ASNQQKALPPPPASIPPPPPLPSGLGSLSPAPPMPP 673
Score = 29.3 bits (64), Expect = 3.1
Identities = 21/65 (32%), Positives = 24/65 (36%), Gaps = 12/65 (18%)
Query: 109 PDPPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESCPAKPVAP 168
P P PP++ G P P + P PPP PPPP A P P
Sbjct: 687 PPPLPPPSSAGPPPPPPPPPLPN---------SPAPPNPGGPPPAPPPPG---LAPPPPP 734
Query: 169 GPCFG 173
G FG
Sbjct: 735 GLFFG 739
>gi|46249414 latent transforming growth factor beta binding protein
1 isoform LTBP-1L [Homo sapiens]
Length = 1722
Score = 40.8 bits (94), Expect = 0.001
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 117 ARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESCPAKPVAPG 169
A G R P + R RR ++ A + RPPPPPPP PA+P PG
Sbjct: 68 AAGAPSRASPGVPSERTRRTSKPGGAALQGLRPPPPPPPE-----PARPAVPG 115
>gi|169207534 PREDICTED: hypothetical protein [Homo sapiens]
Length = 183
Score = 40.8 bits (94), Expect = 0.001
Identities = 37/104 (35%), Positives = 43/104 (41%), Gaps = 24/104 (23%)
Query: 90 PHILRSKDVYGYSSCRALVPDPPGPPTARGQARRP------VPRAAARRRRRGARAAAAR 143
P L + V G + + L P PGPPT R R P PRA+ R R A+
Sbjct: 26 PRFLATPRVPGTPTSQ-LPPRIPGPPTTRQPPRVPDHLHLSCPRASPDRPRPSCPLASPD 84
Query: 144 RRKP----------RP--PPPPPP-----PPEESCPAKPVAPGP 170
RR+P RP P PP P PP S A PV P P
Sbjct: 85 RRRPAIPRASPDRPRPISPAPPGPPTSRQPPRISVAAAPVLPAP 128
Score = 31.6 bits (70), Expect = 0.62
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 18/57 (31%)
Query: 105 RALVPDPPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESC 161
R + P PPGPPT+R R V A P P PP PP + C
Sbjct: 99 RPISPAPPGPPTSRQPPRISVAAA------------------PVLPAPPRPPTQRRC 137
>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
sapiens]
Length = 238
Score = 40.8 bits (94), Expect = 0.001
Identities = 28/73 (38%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 104 CRALVPDPPGP--PTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESC 161
CR +V DP GP P G P + G R A R P PP P PP E
Sbjct: 28 CR-MVCDPHGPRGPGPDGAPASVPPFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGR 86
Query: 162 PAKPVAPGPCFGG 174
P P PGP GG
Sbjct: 87 PGPPGPPGPGPGG 99
Score = 32.3 bits (72), Expect = 0.36
Identities = 23/66 (34%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Query: 111 PPGPPTARGQARRPVPRAAARRRRR----GARAAAARRRKPRPPPPPPPPPEESCPAKPV 166
PP PP A+G+ R R A R G R +P PP PP P P PA
Sbjct: 50 PPFPPGAKGEVGR---RGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGPGPGGVAPAAGY 106
Query: 167 APGPCF 172
P F
Sbjct: 107 VPRIAF 112
>gi|110431370 espin [Homo sapiens]
Length = 854
Score = 40.8 bits (94), Expect = 0.001
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 6/68 (8%)
Query: 103 SCRALVPDPPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESCP 162
+ R + P PP A VP A A A+R P PPPPPPP PE +
Sbjct: 559 AARGSLEGPSAPPQAALLPGNHVPNGCA------ADPKASRELPPPPPPPPPPLPEAASS 612
Query: 163 AKPVAPGP 170
P P P
Sbjct: 613 PPPAPPLP 620
Score = 32.0 bits (71), Expect = 0.47
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
Query: 147 PRPPPP----PPPPPEESCPAKPVAP 168
P PPPP PPPPP P PV P
Sbjct: 439 PPPPPPGTQLPPPPPGYPAPKPPVGP 464
Score = 31.6 bits (70), Expect = 0.62
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
Query: 146 KPRPPPP----PPPPPEESCPAKPVAPG 169
KP PPPP PPPPP P PG
Sbjct: 427 KPTPPPPPPSFPPPPPPPGTQLPPPPPG 454
Score = 30.0 bits (66), Expect = 1.8
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 147 PRPPPPPPPPPEESCPAKPVAPGP 170
P PPPPPPP + P P P P
Sbjct: 435 PSFPPPPPPPGTQLPPPPPGYPAP 458
>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
Length = 2440
Score = 40.4 bits (93), Expect = 0.001
Identities = 25/69 (36%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
Query: 111 PPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESCPAKPVAPGP 170
P G TA Q RR + A +AAA PPPP PPPPE P++ P
Sbjct: 569 PRGRKTANSQGRRKGRITRSMTNEAAAASAAAAAATEEPPPPLPPPPE------PISTEP 622
Query: 171 CFGGRTLEE 179
R EE
Sbjct: 623 VETSRWTEE 631
>gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]
Length = 365
Score = 40.4 bits (93), Expect = 0.001
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 114 PPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPP---PPPPPEESCPAKPV 166
P T A +P+ A R RG A R PRPPP PPPPP PA+P+
Sbjct: 285 PQTTPAAASPDLPQPA--ERSRGEPRPAEPRAPPRPPPAARRPPPPPAPGAPARPL 338
Score = 30.8 bits (68), Expect = 1.1
Identities = 16/44 (36%), Positives = 19/44 (43%)
Query: 126 PRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESCPAKPVAPG 169
P AA+ + A + R P PP PPP P P APG
Sbjct: 289 PAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARRPPPPPAPG 332
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 40.4 bits (93), Expect = 0.001
Identities = 23/82 (28%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 109 PDPPGPPTARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEESCPAKPVAP 168
P PP PP +P + + P PPPPPPPPP S P + P
Sbjct: 1966 PLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPPPPPPPPPSAPPQVQLP 2025
Query: 169 G----PCFGGRTLEEIWRAATP 186
P F ++ + A P
Sbjct: 2026 VSLDLPLFPSIMMQPVQHPALP 2047
Score = 38.1 bits (87), Expect = 0.007
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 149 PPPPPPPPPEESCPAKPVAPGPCFGGRTLEEIWRAATPT 187
PPPPPPPPP P +P + GP T+ +A PT
Sbjct: 1958 PPPPPPPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPT 1996
Score = 32.3 bits (72), Expect = 0.36
Identities = 11/14 (78%), Positives = 11/14 (78%)
Query: 147 PRPPPPPPPPPEES 160
P PPPPPPPPP S
Sbjct: 3118 PPPPPPPPPPPSSS 3131
Score = 32.0 bits (71), Expect = 0.47
Identities = 11/14 (78%), Positives = 11/14 (78%)
Query: 147 PRPPPPPPPPPEES 160
P PPPPPPPPP S
Sbjct: 3117 PPPPPPPPPPPPSS 3130
Score = 29.3 bits (64), Expect = 3.1
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 116 TARGQARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPP 157
T G P +A +A + PPPPPPPPP
Sbjct: 3084 TPPGAGMLGFPTSATSSPALSLSSAPTKPLLQTPPPPPPPPP 3125
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,770,151
Number of Sequences: 37866
Number of extensions: 889579
Number of successful extensions: 29399
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 828
Number of HSP's that attempted gapping in prelim test: 11995
Number of HSP's gapped (non-prelim): 10384
length of query: 235
length of database: 18,247,518
effective HSP length: 99
effective length of query: 136
effective length of database: 14,498,784
effective search space: 1971834624
effective search space used: 1971834624
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.