Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 57165361
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|57165361 ring finger protein 165 [Homo sapiens]
(346 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57165361 ring finger protein 165 [Homo sapiens] 726 0.0
gi|37595553 ring finger protein 111 [Homo sapiens] 258 7e-69
gi|7662486 ring finger protein 44 [Homo sapiens] 72 6e-13
gi|150378447 zinc and ring finger 3 [Homo sapiens] 64 2e-10
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 62 6e-10
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 62 6e-10
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 62 6e-10
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 62 6e-10
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 62 6e-10
gi|58331204 ring finger protein 150 [Homo sapiens] 62 6e-10
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 60 2e-09
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 60 2e-09
gi|34577087 ring finger protein 13 [Homo sapiens] 60 2e-09
gi|6005864 ring finger protein 13 [Homo sapiens] 60 2e-09
gi|14149702 ring finger protein 167 [Homo sapiens] 60 3e-09
gi|29789407 ring finger protein 149 [Homo sapiens] 60 4e-09
gi|29788758 ring finger protein 130 [Homo sapiens] 60 4e-09
gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 59 6e-09
gi|34452684 ring finger protein, LIM domain interacting [Homo sa... 59 6e-09
gi|5174653 ring finger protein 6 [Homo sapiens] 58 1e-08
gi|34305295 ring finger protein 6 [Homo sapiens] 58 1e-08
gi|34305293 ring finger protein 6 [Homo sapiens] 58 1e-08
gi|7706039 ring finger protein 181 [Homo sapiens] 57 2e-08
gi|56711322 ring finger protein 43 [Homo sapiens] 57 2e-08
gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo ... 56 4e-08
gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo ... 56 4e-08
gi|37675277 ring finger protein 148 [Homo sapiens] 56 5e-08
gi|7657520 ring finger protein 11 [Homo sapiens] 55 7e-08
gi|21040269 ring finger protein 133 [Homo sapiens] 55 9e-08
gi|23821044 zinc finger/RING finger 2 [Homo sapiens] 53 4e-07
>gi|57165361 ring finger protein 165 [Homo sapiens]
Length = 346
Score = 726 bits (1875), Expect = 0.0
Identities = 346/346 (100%), Positives = 346/346 (100%)
Query: 1 MVLVHVGYLVLPVFGSVRNRGAPFQRSQHPHATSCRHFHLGPPQPQQLAPDFPLAHPVQS 60
MVLVHVGYLVLPVFGSVRNRGAPFQRSQHPHATSCRHFHLGPPQPQQLAPDFPLAHPVQS
Sbjct: 1 MVLVHVGYLVLPVFGSVRNRGAPFQRSQHPHATSCRHFHLGPPQPQQLAPDFPLAHPVQS 60
Query: 61 QPGLSAHMAPAHQHSGALHQSLTPLPTLQFQDVTGPSFLPQALHQQYLLQQQLLEAQHRR 120
QPGLSAHMAPAHQHSGALHQSLTPLPTLQFQDVTGPSFLPQALHQQYLLQQQLLEAQHRR
Sbjct: 61 QPGLSAHMAPAHQHSGALHQSLTPLPTLQFQDVTGPSFLPQALHQQYLLQQQLLEAQHRR 120
Query: 121 LVSHPRRSQERVSVHPHRLHPSFDFGQLQTPQPRYLAEGTDWDLSVDAGLSPAQFQVRPI 180
LVSHPRRSQERVSVHPHRLHPSFDFGQLQTPQPRYLAEGTDWDLSVDAGLSPAQFQVRPI
Sbjct: 121 LVSHPRRSQERVSVHPHRLHPSFDFGQLQTPQPRYLAEGTDWDLSVDAGLSPAQFQVRPI 180
Query: 181 PQHYQHYLATPRMHHFPRNSSSTQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYE 240
PQHYQHYLATPRMHHFPRNSSSTQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYE
Sbjct: 181 PQHYQHYLATPRMHHFPRNSSSTQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYE 240
Query: 241 ELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSM 300
ELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSM
Sbjct: 241 ELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSM 300
Query: 301 LEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIETQLGADS 346
LEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIETQLGADS
Sbjct: 301 LEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIETQLGADS 346
>gi|37595553 ring finger protein 111 [Homo sapiens]
Length = 986
Score = 258 bits (658), Expect = 7e-69
Identities = 148/349 (42%), Positives = 201/349 (57%), Gaps = 37/349 (10%)
Query: 22 APFQRSQHPHATSCRHFHLGPPQPQQLAP--DFPLAHPVQS-QPGLSAHMA--------P 70
A R H A++C H H PP Q P D+ + HPV + +S+H P
Sbjct: 651 ASLTRPLHHQASACPHSHGNPPPQTQPPPQVDYVIPHPVHAFHSQISSHATSHPVAPPPP 710
Query: 71 AHQHSGAL----HQSLTPLPTLQFQDVTGPSFLPQALHQQYLLQQQLLEAQHRRLVSHPR 126
H S A H T P T P Q LH ++Q+ +E Q RR++ HP
Sbjct: 711 THLASTAAPIPQHLPPTHQPISHHIPATAPP--AQRLHPHEVMQR--MEVQRRRMMQHPT 766
Query: 127 RSQERVSVHPHRLHPSFDFG------QLQTPQPRYLAEGTDWDLSVDAGLSPAQFQVRPI 180
R+ ER HPHR+HP++ G Q + PR E + W+L ++AG++ A + +
Sbjct: 767 RAHERPPPHPHRMHPNYGHGHHIHVPQTMSSHPRQAPERSAWELGIEAGVTAATYTPGAL 826
Query: 181 PQHYQHYLATPRMHHFPRNSSSTQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYE 240
H HY A PR+HH + ++V ++ YP+ + +++ GL+ + R ++E
Sbjct: 827 HPHLAHYHAPPRLHHL--QLGALPLMVPDMAGYPH--IRYIS-SGLDGTSFRGPFRGNFE 881
Query: 241 ELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRR---PQDGKGKKDEGEESDTDEKCTIC 297
EL+ LE+RLGNV RGA Q TIER T+PHKYKKR+ QDG +EG E DT+EKCTIC
Sbjct: 882 ELIHLEERLGNVNRGASQGTIERCTYPHKYKKRKLHCKQDG----EEGTEEDTEEKCTIC 937
Query: 298 LSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIETQLGADS 346
LS+LE+GEDVRRLPCMHLFHQ+CVDQWL +KKCPICRVDIE QL ++S
Sbjct: 938 LSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEAQLPSES 986
>gi|7662486 ring finger protein 44 [Homo sapiens]
Length = 432
Score = 72.4 bits (176), Expect = 6e-13
Identities = 85/322 (26%), Positives = 119/322 (36%), Gaps = 66/322 (20%)
Query: 59 QSQPGLSAHMAPAHQ--HSGALHQSLTPLPTLQFQDVTGPSFLPQALHQQYLLQQQLLEA 116
Q PG SA PA SG H L LP Q T Q L Y L+ +
Sbjct: 125 QHIPGCSAQQLPACSVMFSGQ-HYPLCCLPPPLIQACT-----MQQLPVPYQAYPHLISS 178
Query: 117 QHRRLVSHPRRSQERVSVHPHRLHPSFDFGQLQTPQPRYLAEGTDWDLSV---------- 166
H L P + P + P F LQT PR + D D+ +
Sbjct: 179 DHYILHPPPPAPPPQ----PTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQPSLGSF 234
Query: 167 ---DAGLSPAQFQVRPI------PQHYQHYLATPRMHHFPRNSSSTQMVVHEIRNYP--- 214
+ PA P+ P H + P H PR S+ + + + P
Sbjct: 235 TYSTSAPGPALSPSVPLHYLPHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPP 294
Query: 215 ------YPQL--HFLALQGLNPSRHTSAVR----------ESYEELLQLEDRLGNVT-RG 255
YP +FL++ ++P+ + E+YE LL L +RLG+ RG
Sbjct: 295 PPPPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRG 354
Query: 256 AVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHL 315
+ IE+ + D + T C +C S E + +R LPC H
Sbjct: 355 LTKADIEQLP-----------SYRFNPDSHQSEQT--LCVVCFSDFEARQLLRVLPCNHE 401
Query: 316 FHQLCVDQWLAMSKKCPICRVD 337
FH CVD+WL ++ CPICR D
Sbjct: 402 FHTKCVDKWLKANRTCPICRAD 423
>gi|150378447 zinc and ring finger 3 [Homo sapiens]
Length = 836
Score = 63.9 bits (154), Expect = 2e-10
Identities = 40/98 (40%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 251 NVTRGAVQ--NTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVR 308
++ R AVQ +E F K K RR + G D S T + C ICL DGE++R
Sbjct: 150 SMNRLAVQALEKMETRKFNSKSKGRR-EGSCGALDTLSSSSTSD-CAICLEKYIDGEELR 207
Query: 309 RLPCMHLFHQLCVDQWLAMSKKCPICRVDIETQLGADS 346
+PC H FH+ CVD WL CP CR +I Q G S
Sbjct: 208 VIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPS 245
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 62.4 bits (150), Expect = 6e-10
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 237 ESYEELLQLEDRLGNVT-RGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCT 295
E+YE LL L +RLG RG + IE+ +++ Q + C
Sbjct: 335 ENYEALLNLAERLGEAKPRGLTKADIEQLP-SYRFNPNNHQSEQ------------TLCV 381
Query: 296 ICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVD 337
+C+ E + +R LPC H FH CVD+WL ++ CPICR D
Sbjct: 382 VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 423
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 62.4 bits (150), Expect = 6e-10
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 237 ESYEELLQLEDRLGNVT-RGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCT 295
E+YE LL L +RLG RG + IE+ +++ Q + C
Sbjct: 335 ENYEALLNLAERLGEAKPRGLTKADIEQLP-SYRFNPNNHQSEQ------------TLCV 381
Query: 296 ICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVD 337
+C+ E + +R LPC H FH CVD+WL ++ CPICR D
Sbjct: 382 VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 423
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 62.4 bits (150), Expect = 6e-10
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 237 ESYEELLQLEDRLGNVT-RGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCT 295
E+YE LL L +RLG RG + IE+ +++ Q + C
Sbjct: 368 ENYEALLNLAERLGEAKPRGLTKADIEQLP-SYRFNPNNHQSEQ------------TLCV 414
Query: 296 ICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVD 337
+C+ E + +R LPC H FH CVD+WL ++ CPICR D
Sbjct: 415 VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 456
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 62.4 bits (150), Expect = 6e-10
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 237 ESYEELLQLEDRLGNVT-RGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCT 295
E+YE LL L +RLG RG + IE+ +++ Q + C
Sbjct: 335 ENYEALLNLAERLGEAKPRGLTKADIEQLP-SYRFNPNNHQSEQ------------TLCV 381
Query: 296 ICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVD 337
+C+ E + +R LPC H FH CVD+WL ++ CPICR D
Sbjct: 382 VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 423
>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
Length = 515
Score = 62.4 bits (150), Expect = 6e-10
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 237 ESYEELLQLEDRLGNVT-RGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCT 295
E+YE LL L +RLG RG + IE+ +++ Q + C
Sbjct: 418 ENYEALLNLAERLGEAKPRGLTKADIEQLP-SYRFNPNNHQSEQ------------TLCV 464
Query: 296 ICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVD 337
+C+ E + +R LPC H FH CVD+WL ++ CPICR D
Sbjct: 465 VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRAD 506
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 62.4 bits (150), Expect = 6e-10
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 281 KKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIET 340
K D+ ESD D C +C+ + + VR LPC HLFH+ CVD WL + CP+C+++I
Sbjct: 266 KGDKETESDFDN-CAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNILK 324
Query: 341 QLG 343
LG
Sbjct: 325 ALG 327
>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
Length = 428
Score = 60.5 bits (145), Expect = 2e-09
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 279 KGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 338
+G K+ G + D+ C +C+ + + + VR L C H+FH+ CVD WL + CP+C+ DI
Sbjct: 265 QGDKEIGPDGDS---CAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDI 321
Query: 339 ETQLGAD 345
LG +
Sbjct: 322 LKALGIE 328
>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
Length = 402
Score = 60.5 bits (145), Expect = 2e-09
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 279 KGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 338
+G K+ G + D+ C +C+ + + + VR L C H+FH+ CVD WL + CP+C+ DI
Sbjct: 239 QGDKEIGPDGDS---CAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDI 295
Query: 339 ETQLGAD 345
LG +
Sbjct: 296 LKALGIE 302
>gi|34577087 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 60.5 bits (145), Expect = 2e-09
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 268 HKYKKRRPQDGKGKK---DEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQW 324
H+ ++ R + + KK + ++ D + C ICL EDG+ +R LPC H +H CVD W
Sbjct: 211 HRARRNRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPW 270
Query: 325 LAMSKK-CPICRVDIETQLG 343
L +KK CP+C+ + G
Sbjct: 271 LTKTKKTCPVCKQKVVPSQG 290
>gi|6005864 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 60.5 bits (145), Expect = 2e-09
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 268 HKYKKRRPQDGKGKK---DEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQW 324
H+ ++ R + + KK + ++ D + C ICL EDG+ +R LPC H +H CVD W
Sbjct: 211 HRARRNRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPW 270
Query: 325 LAMSKK-CPICRVDIETQLG 343
L +KK CP+C+ + G
Sbjct: 271 LTKTKKTCPVCKQKVVPSQG 290
>gi|14149702 ring finger protein 167 [Homo sapiens]
Length = 350
Score = 60.1 bits (144), Expect = 3e-09
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 286 EESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKK-CPICR 335
++ D + C ICL EDG+ +R LPC H +H CVD WL ++K CPIC+
Sbjct: 222 QKGDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICK 272
>gi|29789407 ring finger protein 149 [Homo sapiens]
Length = 400
Score = 59.7 bits (143), Expect = 4e-09
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 292 EKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIETQLG 343
E C +C+ + + +R LPC H+FH++C+D WL + CP+C++D+ LG
Sbjct: 267 ENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIKALG 318
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 59.7 bits (143), Expect = 4e-09
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 281 KKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIET 340
KK + E + C +C+ + + VR LPC H+FH+ CVD WL+ CP+C+++I
Sbjct: 251 KKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNILK 310
Query: 341 QLG 343
LG
Sbjct: 311 ALG 313
>gi|34452686 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 58.9 bits (141), Expect = 6e-09
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 287 ESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICR 335
E+D + C++C++ +G +R+LPC H +H C+D+WL+ + CPICR
Sbjct: 563 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 611
>gi|34452684 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 58.9 bits (141), Expect = 6e-09
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 287 ESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICR 335
E+D + C++C++ +G +R+LPC H +H C+D+WL+ + CPICR
Sbjct: 563 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 611
>gi|5174653 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 58.2 bits (139), Expect = 1e-08
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 287 ESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICR 335
+S+ + C++C+S G +R+LPCMH FH C+D+WL+ + CPICR
Sbjct: 625 DSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICR 673
>gi|34305295 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 58.2 bits (139), Expect = 1e-08
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 287 ESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICR 335
+S+ + C++C+S G +R+LPCMH FH C+D+WL+ + CPICR
Sbjct: 625 DSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICR 673
>gi|34305293 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 58.2 bits (139), Expect = 1e-08
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 287 ESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICR 335
+S+ + C++C+S G +R+LPCMH FH C+D+WL+ + CPICR
Sbjct: 625 DSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICR 673
>gi|7706039 ring finger protein 181 [Homo sapiens]
Length = 153
Score = 57.0 bits (136), Expect = 2e-08
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 288 SDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIET 340
S + KC +CL E+ E +PC HLFH C+ WL+ + CP+CR ++ T
Sbjct: 70 SQAELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSCPLCRYELPT 122
>gi|56711322 ring finger protein 43 [Homo sapiens]
Length = 783
Score = 57.0 bits (136), Expect = 2e-08
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 283 DEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 338
D G + C ICL +G+++R + C+H FH+ CVD WL + CP+C +I
Sbjct: 261 DSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNI 316
>gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo
sapiens]
Length = 183
Score = 56.2 bits (134), Expect = 4e-08
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 283 DEGEESDTDE--KCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIET 340
D G + +E +C ICL G+ +R LPC H FH C+D WL S CP CR ++
Sbjct: 75 DPGRDKSEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTCPYCRGPVDA 134
Query: 341 QL 342
L
Sbjct: 135 AL 136
>gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo
sapiens]
Length = 183
Score = 56.2 bits (134), Expect = 4e-08
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 283 DEGEESDTDE--KCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIET 340
D G + +E +C ICL G+ +R LPC H FH C+D WL S CP CR ++
Sbjct: 75 DPGRDKSEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTCPYCRGPVDA 134
Query: 341 QL 342
L
Sbjct: 135 AL 136
>gi|37675277 ring finger protein 148 [Homo sapiens]
Length = 305
Score = 55.8 bits (133), Expect = 5e-08
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 282 KDEGEESDTDE-KCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 338
K+ EE D +E C +C + + VR L C H FH+ C+D WL + CP+C+ DI
Sbjct: 245 KEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAHRTCPMCKCDI 302
>gi|7657520 ring finger protein 11 [Homo sapiens]
Length = 154
Score = 55.5 bits (132), Expect = 7e-08
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 279 KGKKDEGEESDTDE--KCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRV 336
KG D G + + +C IC+ G+ +R LPCMH++H C+D WL S CP C
Sbjct: 82 KGVYDPGRDGSEKKIRECVICMMDFVYGDPIRFLPCMHIYHLDCIDDWLMRSFTCPSCME 141
Query: 337 DIETQL 342
++ L
Sbjct: 142 PVDAAL 147
>gi|21040269 ring finger protein 133 [Homo sapiens]
Length = 376
Score = 55.1 bits (131), Expect = 9e-08
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 281 KKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIET 340
K+ + E + + C IC + + VR L C H FH+ C+D W+ CPIC+ DI
Sbjct: 243 KEGDEEINPNGDSCVICFERYKPNDIVRILTCKHFFHKNCIDPWILPHGTCPICKCDILK 302
Query: 341 QLG 343
LG
Sbjct: 303 VLG 305
>gi|23821044 zinc finger/RING finger 2 [Homo sapiens]
Length = 242
Score = 53.1 bits (126), Expect = 4e-07
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 7/51 (13%)
Query: 282 KDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCP 332
KD GE C ICL L+ G+ + RLPC+ ++H+ C+D+W +++ CP
Sbjct: 194 KDAGE-------CAICLEELQQGDTIARLPCLCIYHKGCIDEWFEVNRSCP 237
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,960,719
Number of Sequences: 37866
Number of extensions: 848495
Number of successful extensions: 3140
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 144
Number of HSP's that attempted gapping in prelim test: 2902
Number of HSP's gapped (non-prelim): 351
length of query: 346
length of database: 18,247,518
effective HSP length: 103
effective length of query: 243
effective length of database: 14,347,320
effective search space: 3486398760
effective search space used: 3486398760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.