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Search of human proteins with 56790947
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56790947 zinc finger, BED domain containing 2 [Homo sapiens]
(218 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56790947 zinc finger, BED domain containing 2 [Homo sapiens] 455 e-128
gi|14150185 zinc finger, BED-type containing 3 [Homo sapiens] 172 2e-43
gi|153791893 zinc finger, BED-type containing 4 [Homo sapiens] 44 1e-04
gi|41152097 DNA segment on chromosome X and Y (unique) 155 expre... 38 0.008
gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapi... 36 0.022
gi|62198235 drebrin-like isoform b [Homo sapiens] 36 0.022
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 35 0.038
gi|239745153 PREDICTED: similar to Putative golgin subfamily A m... 35 0.049
gi|239745127 PREDICTED: similar to Putative golgin subfamily A m... 35 0.049
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 35 0.049
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 35 0.049
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 35 0.049
gi|21361670 drebrin-like isoform a [Homo sapiens] 35 0.065
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 34 0.11
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 34 0.11
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 34 0.11
gi|157427659 coiled-coil domain containing 70 precursor [Homo sa... 34 0.11
gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo sa... 33 0.14
gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo sa... 33 0.14
gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo sa... 33 0.14
gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo sa... 33 0.14
gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo sa... 33 0.14
gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo sa... 33 0.14
gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo sa... 33 0.14
gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo sap... 33 0.14
gi|171906575 drebrin-like isoform c [Homo sapiens] 33 0.14
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 33 0.19
gi|42476130 ubiquitin interaction motif containing 1 [Homo sapiens] 33 0.19
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo... 33 0.19
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo... 33 0.19
>gi|56790947 zinc finger, BED domain containing 2 [Homo sapiens]
Length = 218
Score = 455 bits (1171), Expect = e-128
Identities = 218/218 (100%), Positives = 218/218 (100%)
Query: 1 MMRREDEEEEGTMMKAKGDLEMKEEEEISETGELVGPFVSAMPTPMPHNKGTRFSEAWEY 60
MMRREDEEEEGTMMKAKGDLEMKEEEEISETGELVGPFVSAMPTPMPHNKGTRFSEAWEY
Sbjct: 1 MMRREDEEEEGTMMKAKGDLEMKEEEEISETGELVGPFVSAMPTPMPHNKGTRFSEAWEY 60
Query: 61 FHLAPARAGHHPNQYATCRLCGRQVSRGPGVNVGTTALWKHLKSMHREELEKSGHGQAGQ 120
FHLAPARAGHHPNQYATCRLCGRQVSRGPGVNVGTTALWKHLKSMHREELEKSGHGQAGQ
Sbjct: 61 FHLAPARAGHHPNQYATCRLCGRQVSRGPGVNVGTTALWKHLKSMHREELEKSGHGQAGQ 120
Query: 121 RQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQREKEVLRRERAVEWRERAVEKRERA 180
RQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQREKEVLRRERAVEWRERAVEKRERA
Sbjct: 121 RQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQREKEVLRRERAVEWRERAVEKRERA 180
Query: 181 LEEVERAILEMKWKVRAEKEACQREKELPAAVHPFHFV 218
LEEVERAILEMKWKVRAEKEACQREKELPAAVHPFHFV
Sbjct: 181 LEEVERAILEMKWKVRAEKEACQREKELPAAVHPFHFV 218
>gi|14150185 zinc finger, BED-type containing 3 [Homo sapiens]
Length = 234
Score = 172 bits (436), Expect = 2e-43
Identities = 88/168 (52%), Positives = 113/168 (67%), Gaps = 2/168 (1%)
Query: 37 PFVSAMPTPMPHNK-GTRFSEAWEYFHLAPARAGHHPNQYATCRLCGRQVSRGPGVNVGT 95
P + PTP P + G +SEAW YFHLAP R GH +ATCRLCG QV RGPG + GT
Sbjct: 27 PGLGPAPTPTPPGRLGAPYSEAWGYFHLAPGRPGHPSGHWATCRLCGEQVGRGPGFHAGT 86
Query: 96 TALWKHLKSMHREELEKSGHGQAGQRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQ 155
+ALW+HL+S HR ELE SG G + P P P EG+W RLLEQ+G +A+ S+
Sbjct: 87 SALWRHLRSAHRRELESSGAGSSPPAA-PCPPPPGPAAAPEGDWARLLEQMGALAVRGSR 145
Query: 156 REKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQ 203
RE+E+ RRE AVE ERA+E+R RAL+E ERA + + +++AE+EA Q
Sbjct: 146 RERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQ 193
>gi|153791893 zinc finger, BED-type containing 4 [Homo sapiens]
Length = 1171
Score = 43.5 bits (101), Expect = 1e-04
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 55 SEAWEYFHLAPARAGHHPNQYATCRLCGRQVSRGPGVNVGTTALWKHLKSMHRE 108
SE W +F LAP + A CR CG +SRG +VGT+ L +HL H E
Sbjct: 459 SEVWHHFSLAPM-----DSLKAECRYCGCAISRGKKGDVGTSCLMRHLYRRHPE 507
Score = 39.3 bits (90), Expect = 0.003
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 41 AMPTPMPHNKGTRFSEAWEYFHLAPARAGHHPNQYATCRLCGRQVSRGP-GVNVGTTALW 99
++P P + R S W++F+L+P N A C C + SRG G ++GT+ L
Sbjct: 274 SLPLPKSTSGSRRRSAVWKHFYLSPL-----DNSKAVCIHCMNEFSRGKNGKDLGTSCLI 328
Query: 100 KHLKSMHR 107
+H+ HR
Sbjct: 329 RHMWRAHR 336
Score = 37.0 bits (84), Expect = 0.013
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 17/103 (16%)
Query: 42 MPTPMPHNKGTRF-------SEAWEYFHLAPARAGHHPNQYATCRLCGRQVSRGPG-VNV 93
+PT + N F S+ W +F + A + C CGR +SRG N+
Sbjct: 541 LPTVVTKNNQVMFPVNSKKTSKLWNHFSICSA-----DSTKVVCLHCGRTISRGKKPTNL 595
Query: 94 GTTALWKHLKSMHREELEKSGHGQAGQRQDPRPHGPQLPTGIE 136
GT+ L +HL+ H L+ + + P ++P G E
Sbjct: 596 GTSCLLRHLQRFHSNVLKT----EVSETARPSSPDTRVPRGTE 634
>gi|41152097 DNA segment on chromosome X and Y (unique) 155
expressed sequence isoform 1 [Homo sapiens]
Length = 695
Score = 37.7 bits (86), Expect = 0.008
Identities = 22/54 (40%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 155 QREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKEL 208
Q+ +E RRE+ E R+RA E++++ LEE+ER + + K+R ++E QR++EL
Sbjct: 283 QQREEQKRREKEAEERQRAEERKQKELEELERE-RKREEKLR-KREQKQRDREL 334
Score = 27.7 bits (60), Expect = 7.9
Identities = 13/53 (24%), Positives = 34/53 (64%)
Query: 155 QREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKE 207
Q+ +E+ ++ + RE+ E+R+RA E ++ + E++ + + E++ +RE++
Sbjct: 276 QKLQELEQQREEQKRREKEAEERQRAEERKQKELEELERERKREEKLRKREQK 328
>gi|169218106 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 436
Score = 36.2 bits (82), Expect = 0.022
Identities = 20/92 (21%), Positives = 46/92 (50%)
Query: 116 GQAGQRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQREKEVLRRERAVEWRERAVE 175
GQ G++++ + E G EQ+ ++E++V ++E V+ +E +
Sbjct: 199 GQMGEQEEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEEQMR 258
Query: 176 KRERALEEVERAILEMKWKVRAEKEACQREKE 207
K+E + E E + E + ++ +KE ++E++
Sbjct: 259 KQEEQMREQEEQMREQEEQMLKQKEQTEQEEQ 290
Score = 32.0 bits (71), Expect = 0.42
Identities = 15/72 (20%), Positives = 39/72 (54%)
Query: 136 EGNWGRLLEQVGTMALWASQREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKV 195
EG G Q+G ++E+++ ++E + +E + K+E + E E + + + +V
Sbjct: 191 EGQMGEQEGQMGEQEEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQEEQVQKQEEQV 250
Query: 196 RAEKEACQREKE 207
+ ++E ++++E
Sbjct: 251 QKQEEQMRKQEE 262
Score = 31.2 bits (69), Expect = 0.71
Identities = 15/64 (23%), Positives = 35/64 (54%)
Query: 144 EQVGTMALWASQREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQ 203
EQ+G ++E++V ++E + +E + K+E + + E + E K ++ +KE +
Sbjct: 352 EQMGEQEEQMQKQEEQVRKQEEQMRKQEEQMRKQEEQMRKQEEQMGEQKEQMGEQKEQMR 411
Query: 204 REKE 207
++E
Sbjct: 412 EQEE 415
Score = 28.9 bits (63), Expect = 3.5
Identities = 16/72 (22%), Positives = 36/72 (50%)
Query: 136 EGNWGRLLEQVGTMALWASQREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKV 195
E G EQ+ ++E+++ ++E + +E + K+E + E + + E K ++
Sbjct: 351 EEQMGEQEEQMQKQEEQVRKQEEQMRKQEEQMRKQEEQMRKQEEQMGEQKEQMGEQKEQM 410
Query: 196 RAEKEACQREKE 207
R ++E +KE
Sbjct: 411 REQEEQMGEQKE 422
>gi|62198235 drebrin-like isoform b [Homo sapiens]
Length = 430
Score = 36.2 bits (82), Expect = 0.022
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 21/120 (17%)
Query: 113 SGHGQAGQRQDPRPHGPQLPTGI---EGNWGRLLEQVGTMALWASQREKEVLRR---ERA 166
S H ++G+ QD GPQ P G + N +++VG + WA ++E RR +R
Sbjct: 141 SFHKESGRFQDV---GPQAPVGSVYQKTNAVSEIKRVGKDSFWAKAEKEEENRRLEEKRR 197
Query: 167 VEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQR------------EKELPAAVHP 214
E +R +E+ R E E A E +++ + + + QR E +AVHP
Sbjct: 198 AEEAQRQLEQERRERELREAARREQRYQEQGGEASPQRTWEQQQEVVSRNRNEQESAVHP 257
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 35.4 bits (80), Expect = 0.038
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 153 ASQREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKELPAAV 212
A +R++ +RA E R+R E+ +RA EE +RA E + K + E++ +R K+L
Sbjct: 339 AEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRARAEEEEKAKVEEQ--KRNKQLEEKK 396
Query: 213 H 213
H
Sbjct: 397 H 397
Score = 33.5 bits (75), Expect = 0.14
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 153 ASQREK-EVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKEL 208
A +RE+ E RER E +RA E+R+R EE +RA E + EK A + + +
Sbjct: 303 AQERERREAEERERMREEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRI 359
Score = 31.6 bits (70), Expect = 0.55
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 153 ASQREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKELPAAV 212
A +R++ +RA E R+R E+ +RA EE +R I E + + E++ + E+E A V
Sbjct: 325 AEERQRIKEEEKRAAEERQRIKEEEKRAAEERQR-IKEEEKRAAEERQRARAEEEEKAKV 383
Score = 30.8 bits (68), Expect = 0.93
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 155 QREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKE 207
+ ++ R+R E +RA E+R+R EE +RA E + + RAE+E + +E
Sbjct: 334 EEKRAAEERQRIKEEEKRAAEERQRIKEEEKRA-AEERQRARAEEEEKAKVEE 385
Score = 30.4 bits (67), Expect = 1.2
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 153 ASQREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKELPA 210
A +RE+ +RA E R+R E+ +RA EE +R I E + + E++ + E++ A
Sbjct: 311 AEERERMREEEKRAAEERQRIKEEEKRAAEERQR-IKEEEKRAAEERQRIKEEEKRAA 367
Score = 29.6 bits (65), Expect = 2.1
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 155 QREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKE 207
+ ++ R+R E +RA E+R+R EE +RA E + +++ E++ E++
Sbjct: 320 EEKRAAEERQRIKEEEKRAAEERQRIKEEEKRA-AEERQRIKEEEKRAAEERQ 371
Score = 28.9 bits (63), Expect = 3.5
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 163 RERAVEWRERA-VEKRERALEEVERAILEMKWKVRAEKEACQREKE 207
+ERA R R E+RER E ++ I + + ++ AE++A +E+E
Sbjct: 262 KERAEAERARLEAEERERIKAEQDKKIADERARIEAEEKAAAQERE 307
>gi|239745153 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 35.0 bits (79), Expect = 0.049
Identities = 16/53 (30%), Positives = 33/53 (62%)
Query: 155 QREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKE 207
++E+E+ R+E + E ++ +E L EVE + E + K++ ++E QR++E
Sbjct: 424 EQEEEMWRQEEKIRELEEMMQDQEEKLREVEEKMQEEEEKMQEQEEKIQRQEE 476
Score = 32.3 bits (72), Expect = 0.32
Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 98 LWKHLKSMHREE--LEKSGHGQAGQRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQ 155
+W+ + MH +E + + Q + R ++ E W R E++ +
Sbjct: 327 MWRQEEKMHEQEEKIREQEDKMWRQEEKIREQEEKIREQEEKMW-RQEEKIREQDEKIQE 385
Query: 156 REKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKE 207
+E+E+ R+E + +E EKR+ + E+ + E K+R ++E R++E
Sbjct: 386 QEEEMWRQEEKIREQE---EKRQEKMWRQEKKMREQDEKIREQEEEMWRQEE 434
Score = 30.0 bits (66), Expect = 1.6
Identities = 13/53 (24%), Positives = 29/53 (54%)
Query: 155 QREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKE 207
QR++E ++ + WR+ + K+E + E E + + K+ ++E Q ++E
Sbjct: 472 QRQEEKIQEQEEKTWRQEKLLKQEEKIWEQEEKMWRQEEKMWEQEEKMQEQEE 524
Score = 29.6 bits (65), Expect = 2.1
Identities = 15/64 (23%), Positives = 35/64 (54%)
Query: 144 EQVGTMALWASQREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQ 203
E++ L ++E+++ R+E + +E + ++E + E I E + K+R ++E
Sbjct: 311 EKMCEQELKIREQEEKMWRQEEKMHEQEEKIREQEDKMWRQEEKIREQEEKIREQEEKMW 370
Query: 204 REKE 207
R++E
Sbjct: 371 RQEE 374
Score = 28.9 bits (63), Expect = 3.5
Identities = 12/53 (22%), Positives = 31/53 (58%)
Query: 155 QREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKE 207
++EK++ ++ + +E + ++E + E+E + + + K+R +E Q E+E
Sbjct: 410 RQEKKMREQDEKIREQEEEMWRQEEKIRELEEMMQDQEEKLREVEEKMQEEEE 462
>gi|239745127 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 35.0 bits (79), Expect = 0.049
Identities = 16/53 (30%), Positives = 33/53 (62%)
Query: 155 QREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKE 207
++E+E+ R+E + E ++ +E L EVE + E + K++ ++E QR++E
Sbjct: 424 EQEEEMWRQEEKIRELEEMMQDQEEKLREVEEKMQEEEEKMQEQEEKIQRQEE 476
Score = 32.3 bits (72), Expect = 0.32
Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 98 LWKHLKSMHREE--LEKSGHGQAGQRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQ 155
+W+ + MH +E + + Q + R ++ E W R E++ +
Sbjct: 327 MWRQEEKMHEQEEKIREQEDKMWRQEEKIREQEEKIREQEEKMW-RQEEKIREQDEKIQE 385
Query: 156 REKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKE 207
+E+E+ R+E + +E EKR+ + E+ + E K+R ++E R++E
Sbjct: 386 QEEEMWRQEEKIREQE---EKRQEKMWRQEKKMREQDEKIREQEEEMWRQEE 434
Score = 30.0 bits (66), Expect = 1.6
Identities = 13/53 (24%), Positives = 29/53 (54%)
Query: 155 QREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKE 207
QR++E ++ + WR+ + K+E + E E + + K+ ++E Q ++E
Sbjct: 472 QRQEEKIQEQEEKTWRQEKLLKQEEKIWEQEEKMWRQEEKMWEQEEKMQEQEE 524
Score = 29.6 bits (65), Expect = 2.1
Identities = 15/64 (23%), Positives = 35/64 (54%)
Query: 144 EQVGTMALWASQREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQ 203
E++ L ++E+++ R+E + +E + ++E + E I E + K+R ++E
Sbjct: 311 EKMCEQELKIREQEEKMWRQEEKMHEQEEKIREQEDKMWRQEEKIREQEEKIREQEEKMW 370
Query: 204 REKE 207
R++E
Sbjct: 371 RQEE 374
Score = 28.9 bits (63), Expect = 3.5
Identities = 12/53 (22%), Positives = 31/53 (58%)
Query: 155 QREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKE 207
++EK++ ++ + +E + ++E + E+E + + + K+R +E Q E+E
Sbjct: 410 RQEKKMREQDEKIREQEEEMWRQEEKIRELEEMMQDQEEKLREVEEKMQEEEE 462
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 35.0 bits (79), Expect = 0.049
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 98 LWKHLKSMHREELEKSGHGQAGQRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQRE 157
+W K M R+E + Q ++++ Q E R+ EQ + RE
Sbjct: 468 MWGQEKKMWRQEKMREQEDQMWEQEEKMRDQEQKMWDQEE---RMWEQDERL------RE 518
Query: 158 KEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKEL 208
KE RE+ W++ + E+ +E E+ + + K+R E+ +REK++
Sbjct: 519 KEERMREQKKMWQQEEKMREEKKTQEQEKKTWDQEEKMREEERMREREKKM 569
Score = 32.0 bits (71), Expect = 0.42
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 142 LLEQVGTMALWAS--QREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKV-RAE 198
LL QV T L ++E+E+ +E+ + +E + ++E L E E + E + K+ R E
Sbjct: 223 LLPQVQTNTLQEEMWRQEEELREQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMRRQE 282
Query: 199 KEACQREKEL 208
K ++EKEL
Sbjct: 283 KRLREQEKEL 292
Score = 31.2 bits (69), Expect = 0.71
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 156 REKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKE 207
REKE RE+ W + + E + E E+ + E + +R ++E Q+++E
Sbjct: 369 REKEERMREQEKMWEQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEE 420
Score = 29.6 bits (65), Expect = 2.1
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 141 RLLEQVGTMALWASQ-REKEVLRRERAVEWRERAVEKRER--------ALEEVERAILEM 191
RL EQ G M + R +E RE+ E RE+ E RE+ ++E E + E
Sbjct: 263 RLREQEGKMREQEEKMRRQEKRLREQEKELREQEKELREQKKLREQEEQMQEQEEKMWEQ 322
Query: 192 KWKVRAEKEACQREKE 207
+ K+R ++E R++E
Sbjct: 323 EEKMREQEEKMWRQEE 338
Score = 29.6 bits (65), Expect = 2.1
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 157 EKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKE 207
++E +R E + RE+ + + E + E E + E + K+R ++E ++E
Sbjct: 552 QEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEKMREQEEKMWEQEE 602
Score = 28.1 bits (61), Expect = 6.0
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 155 QREKEVLRRERAVEWRE-RAVEKRERA-----LEEVERAILEMKWKVRAEKEACQREKEL 208
Q+++E + + EW++ R E++E+ ++E E I E + K+R ++E +EK++
Sbjct: 416 QKQEENMWEQEEKEWQQQRLPEQKEKLWEQEKMQEQEEKIWEQEEKIRDQEEMWGQEKKM 475
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 35.0 bits (79), Expect = 0.049
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 120 QRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQREKEVLRRERAVEWRERAVEKRER 179
Q ++ R H L E RL + L A QRE+E +ER E R E+RE+
Sbjct: 653 QEEEERRHQELLQKKKEEEQERLRKAAEAKRL-AEQREQERREQERR-EQERREQERREQ 710
Query: 180 ALEEVERAILEMKWK-----VRAEKEACQREKEL 208
E ER + E + + ++AE+E +REK L
Sbjct: 711 ERREQERQLAEQERRREQERLQAERELQEREKAL 744
Score = 28.5 bits (62), Expect = 4.6
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 144 EQVGTMALWASQREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEA-- 201
EQ +A +RE+E L+ ER ++ RE+A+ ++ E+++R + E K K ++ A
Sbjct: 714 EQERQLAEQERRREQERLQAERELQEREKALRLQK---EQLQRELEEKKKKEEQQRLAER 770
Query: 202 -CQREKELPA 210
Q E+E A
Sbjct: 771 QLQEEQEKKA 780
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 35.0 bits (79), Expect = 0.049
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 120 QRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQREKEVLRRERAVEWRERAVEKRER 179
Q ++ R H L E RL + L A QRE+E +ER E R E+RE+
Sbjct: 649 QEEEERRHQELLQKKKEEEQERLRKAAEAKRL-AEQREQERREQERR-EQERREQERREQ 706
Query: 180 ALEEVERAILEMKWK-----VRAEKEACQREKEL 208
E ER + E + + ++AE+E +REK L
Sbjct: 707 ERREQERQLAEQERRREQERLQAERELQEREKAL 740
Score = 28.5 bits (62), Expect = 4.6
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 144 EQVGTMALWASQREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEA-- 201
EQ +A +RE+E L+ ER ++ RE+A+ ++ E+++R + E K K ++ A
Sbjct: 710 EQERQLAEQERRREQERLQAERELQEREKALRLQK---EQLQRELEEKKKKEEQQRLAER 766
Query: 202 -CQREKELPA 210
Q E+E A
Sbjct: 767 QLQEEQEKKA 776
>gi|21361670 drebrin-like isoform a [Homo sapiens]
Length = 431
Score = 34.7 bits (78), Expect = 0.065
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 22/121 (18%)
Query: 113 SGHGQAGQRQDPRPHGPQLPTGI---EGNWGRLLEQVGTMALWASQREKEVLRR---ERA 166
S H ++G+ QD GPQ P G + N +++VG + WA ++E RR +R
Sbjct: 141 SFHKESGRFQDV---GPQAPVGSVYQKTNAVSEIKRVGKDSFWAKAEKEEENRRLEEKRR 197
Query: 167 VEWRERAVEKRERALEEVERAILEMKWKVRA------------EKEACQREK-ELPAAVH 213
E +R +E+ R E E A E +++ + ++E R + E +AVH
Sbjct: 198 AEEAQRQLEQERRERELREAARREQRYQEQGGEASPQSRTWEQQQEVVSRNRNEQESAVH 257
Query: 214 P 214
P
Sbjct: 258 P 258
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 33.9 bits (76), Expect = 0.11
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 141 RLLEQVGTMALWA---SQREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRA 197
+L QV LW Q+E+++ R+E ++ E ++++E + E E I E + K+R
Sbjct: 280 KLQAQVEENELWNRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEKMRR 339
Query: 198 EKEACQREKE 207
++E ++E
Sbjct: 340 QEEMMWEKEE 349
Score = 31.2 bits (69), Expect = 0.71
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 15/111 (13%)
Query: 98 LWKHLKSMHREELEKSGHGQAGQRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQRE 157
+W+ + MH E EK + Q Q+ + W R E++ ++E
Sbjct: 546 MWREEEKMH--EQEKIWEEEKRQEQEDKM------------W-RQEEKIREQEEKVWRQE 590
Query: 158 KEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKEL 208
+++ +E + +E + K+E + E E I E + K+R ++E + ++E+
Sbjct: 591 EKIREQEEKRQEQEEKMWKQEEKIREQEEKIQEQEEKIREQEEKIREQEEM 641
Score = 29.6 bits (65), Expect = 2.1
Identities = 13/51 (25%), Positives = 29/51 (56%)
Query: 157 EKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKE 207
++E+ R++ + +E + K+E + E I E + K+R ++E R++E
Sbjct: 488 QEEIWRQKEKMHEQEEKIRKQEEKVWRQEEKIREQEEKIREQEEKMWRQEE 538
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 33.9 bits (76), Expect = 0.11
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 141 RLLEQVGTMALWA---SQREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRA 197
+L QV LW Q+E+++ R+E ++ E ++++E + E E I E + K+R
Sbjct: 280 KLQAQVEENELWNRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEKMRR 339
Query: 198 EKEACQREKE 207
++E ++E
Sbjct: 340 QEEMMWEKEE 349
Score = 32.7 bits (73), Expect = 0.25
Identities = 13/53 (24%), Positives = 31/53 (58%)
Query: 155 QREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKE 207
Q ++++ R+E + +E + +++ + E E I E + K+R ++E Q ++E
Sbjct: 561 QEQEKMRRQEEKIREQEEKIREQKEKIREQEEKIWEQEEKIREQEEMMQEQEE 613
Score = 31.6 bits (70), Expect = 0.55
Identities = 20/116 (17%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 98 LWKHLKSMHREELEKSGHGQAGQRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQRE 157
+W+ + MH +E + + ++++ + E R E++ ++E
Sbjct: 477 IWRQKEKMHEQEKIRKQEEKVWRQEEKMHDQEEKIREQEEKMWRQEEKIREQEEKIREQE 536
Query: 158 KEVLRRERAVEWRERAVEKRERALEEVERA------ILEMKWKVRAEKEACQREKE 207
+++ +E ++ +E + ++E ++E E+ I E + K+R +KE + ++E
Sbjct: 537 EKIREQEEMMQEQEEKMGEQEEKMQEQEKMRRQEEKIREQEEKIREQKEKIREQEE 592
Score = 30.4 bits (67), Expect = 1.2
Identities = 13/54 (24%), Positives = 32/54 (59%)
Query: 155 QREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKEL 208
++E++V R+E + +E + ++E + E I E + K+R ++E + ++E+
Sbjct: 492 KQEEKVWRQEEKMHDQEEKIREQEEKMWRQEEKIREQEEKIREQEEKIREQEEM 545
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 33.9 bits (76), Expect = 0.11
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 141 RLLEQVGTMALWA---SQREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRA 197
+L QV LW Q+E+++ R+E ++ E ++++E + E E I E + K+R
Sbjct: 341 KLQAQVEENELWNRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEKMRR 400
Query: 198 EKEACQREKE 207
++E ++E
Sbjct: 401 QEEMMWEKEE 410
Score = 31.2 bits (69), Expect = 0.71
Identities = 23/111 (20%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 98 LWKHLKSMHREELEKSGHGQAGQRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQRE 157
+W+ + +H E EK + Q Q+ + E W R E++ ++E
Sbjct: 500 MWRQEEKIH--EQEKIREEEKRQEQEEMWRQEEKIREQEEIW-RQKEKIHEQEEKIRKQE 556
Query: 158 KEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKEL 208
+++ R+E + +E + ++E + E I E + K+R ++E + ++E+
Sbjct: 557 EKMWRQEEKMHDQEEKIREQEEKVWRQEEKIREQEEKIREQEEKIREQEEM 607
>gi|157427659 coiled-coil domain containing 70 precursor [Homo
sapiens]
Length = 233
Score = 33.9 bits (76), Expect = 0.11
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 150 ALWASQREKEVLRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREK 206
ALW +R++ +L+ ++A+ E+A+ ERAL E E+A+ E K + E+ A E+
Sbjct: 141 ALW--ERDRNLLQEDKALWEEEKALWVEERALLEGEKALWEDKTSLWEEENALWEEE 195
>gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo
sapiens]
Length = 1268
Score = 33.5 bits (75), Expect = 0.14
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 45 PMPHNKGTRFSEAWEYFHLAPARAGHHPNQYATCRLCGRQVSRG-PGVNVGTTALWKHLK 103
P P K ++S+ ++ F + +H + AT +L R P L H+
Sbjct: 249 PAPRLKSKKWSKKFQSF-IESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQLKDHID 307
Query: 104 --SMHREELEKSGHGQAGQRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQREK-EV 160
R E +++ + +G ++ + P+ I G + + L + +E+ E
Sbjct: 308 RTKKKRGEKDETEYEYSGSEEEEEENDSGEPSSILNLPGESTLRRDFLRLQLANKERSEA 367
Query: 161 LRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKEL 208
LRR++ + + E + + L E ++ I E K + R +E +REKEL
Sbjct: 368 LRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQRRRLEEQQRREKEL 415
>gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo
sapiens]
Length = 1276
Score = 33.5 bits (75), Expect = 0.14
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 45 PMPHNKGTRFSEAWEYFHLAPARAGHHPNQYATCRLCGRQVSRG-PGVNVGTTALWKHLK 103
P P K ++S+ ++ F + +H + AT +L R P L H+
Sbjct: 249 PAPRLKSKKWSKKFQSF-IESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQLKDHID 307
Query: 104 --SMHREELEKSGHGQAGQRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQREK-EV 160
R E +++ + +G ++ + P+ I G + + L + +E+ E
Sbjct: 308 RTKKKRGEKDETEYEYSGSEEEEEENDSGEPSSILNLPGESTLRRDFLRLQLANKERSEA 367
Query: 161 LRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKEL 208
LRR++ + + E + + L E ++ I E K + R +E +REKEL
Sbjct: 368 LRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQRRRLEEQQRREKEL 415
>gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo
sapiens]
Length = 1297
Score = 33.5 bits (75), Expect = 0.14
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 45 PMPHNKGTRFSEAWEYFHLAPARAGHHPNQYATCRLCGRQVSRG-PGVNVGTTALWKHLK 103
P P K ++S+ ++ F + +H + AT +L R P L H+
Sbjct: 249 PAPRLKSKKWSKKFQSF-IESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQLKDHID 307
Query: 104 --SMHREELEKSGHGQAGQRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQREK-EV 160
R E +++ + +G ++ + P+ I G + + L + +E+ E
Sbjct: 308 RTKKKRGEKDETEYEYSGSEEEEEENDSGEPSSILNLPGESTLRRDFLRLQLANKERSEA 367
Query: 161 LRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKEL 208
LRR++ + + E + + L E ++ I E K + R +E +REKEL
Sbjct: 368 LRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQRRRLEEQQRREKEL 415
>gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo
sapiens]
Length = 1305
Score = 33.5 bits (75), Expect = 0.14
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 45 PMPHNKGTRFSEAWEYFHLAPARAGHHPNQYATCRLCGRQVSRG-PGVNVGTTALWKHLK 103
P P K ++S+ ++ F + +H + AT +L R P L H+
Sbjct: 249 PAPRLKSKKWSKKFQSF-IESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQLKDHID 307
Query: 104 --SMHREELEKSGHGQAGQRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQREK-EV 160
R E +++ + +G ++ + P+ I G + + L + +E+ E
Sbjct: 308 RTKKKRGEKDETEYEYSGSEEEEEENDSGEPSSILNLPGESTLRRDFLRLQLANKERSEA 367
Query: 161 LRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKEL 208
LRR++ + + E + + L E ++ I E K + R +E +REKEL
Sbjct: 368 LRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQRRRLEEQQRREKEL 415
>gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo
sapiens]
Length = 1323
Score = 33.5 bits (75), Expect = 0.14
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 45 PMPHNKGTRFSEAWEYFHLAPARAGHHPNQYATCRLCGRQVSRG-PGVNVGTTALWKHLK 103
P P K ++S+ ++ F + +H + AT +L R P L H+
Sbjct: 249 PAPRLKSKKWSKKFQSF-IESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQLKDHID 307
Query: 104 --SMHREELEKSGHGQAGQRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQREK-EV 160
R E +++ + +G ++ + P+ I G + + L + +E+ E
Sbjct: 308 RTKKKRGEKDETEYEYSGSEEEEEENDSGEPSSILNLPGESTLRRDFLRLQLANKERSEA 367
Query: 161 LRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKEL 208
LRR++ + + E + + L E ++ I E K + R +E +REKEL
Sbjct: 368 LRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQRRRLEEQQRREKEL 415
>gi|239735582 TRAF2 and NCK interacting kinase isoform 3 [Homo
sapiens]
Length = 1331
Score = 33.5 bits (75), Expect = 0.14
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 45 PMPHNKGTRFSEAWEYFHLAPARAGHHPNQYATCRLCGRQVSRG-PGVNVGTTALWKHLK 103
P P K ++S+ ++ F + +H + AT +L R P L H+
Sbjct: 249 PAPRLKSKKWSKKFQSF-IESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQLKDHID 307
Query: 104 --SMHREELEKSGHGQAGQRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQREK-EV 160
R E +++ + +G ++ + P+ I G + + L + +E+ E
Sbjct: 308 RTKKKRGEKDETEYEYSGSEEEEEENDSGEPSSILNLPGESTLRRDFLRLQLANKERSEA 367
Query: 161 LRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKEL 208
LRR++ + + E + + L E ++ I E K + R +E +REKEL
Sbjct: 368 LRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQRRRLEEQQRREKEL 415
>gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo
sapiens]
Length = 1352
Score = 33.5 bits (75), Expect = 0.14
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 45 PMPHNKGTRFSEAWEYFHLAPARAGHHPNQYATCRLCGRQVSRG-PGVNVGTTALWKHLK 103
P P K ++S+ ++ F + +H + AT +L R P L H+
Sbjct: 249 PAPRLKSKKWSKKFQSF-IESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQLKDHID 307
Query: 104 --SMHREELEKSGHGQAGQRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQREK-EV 160
R E +++ + +G ++ + P+ I G + + L + +E+ E
Sbjct: 308 RTKKKRGEKDETEYEYSGSEEEEEENDSGEPSSILNLPGESTLRRDFLRLQLANKERSEA 367
Query: 161 LRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKEL 208
LRR++ + + E + + L E ++ I E K + R +E +REKEL
Sbjct: 368 LRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQRRRLEEQQRREKEL 415
>gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo
sapiens]
Length = 1360
Score = 33.5 bits (75), Expect = 0.14
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 45 PMPHNKGTRFSEAWEYFHLAPARAGHHPNQYATCRLCGRQVSRG-PGVNVGTTALWKHLK 103
P P K ++S+ ++ F + +H + AT +L R P L H+
Sbjct: 249 PAPRLKSKKWSKKFQSF-IESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQLKDHID 307
Query: 104 --SMHREELEKSGHGQAGQRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQREK-EV 160
R E +++ + +G ++ + P+ I G + + L + +E+ E
Sbjct: 308 RTKKKRGEKDETEYEYSGSEEEEEENDSGEPSSILNLPGESTLRRDFLRLQLANKERSEA 367
Query: 161 LRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKEL 208
LRR++ + + E + + L E ++ I E K + R +E +REKEL
Sbjct: 368 LRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQRRRLEEQQRREKEL 415
>gi|171906575 drebrin-like isoform c [Homo sapiens]
Length = 439
Score = 33.5 bits (75), Expect = 0.14
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 113 SGHGQAGQRQDPRPHGPQLPTGI---EGNWGRLLEQVGTMALWASQREKEVLRR---ERA 166
S H ++G+ QD GPQ P G + N +++VG + WA ++E RR +R
Sbjct: 141 SFHKESGRFQDV---GPQAPVGSVYQKTNAVSEIKRVGKDSFWAKAEKEEENRRLEEKRR 197
Query: 167 VEWRERAV--EKRERALEEVER 186
E +R + E+RER L E R
Sbjct: 198 AEEAQRQLEQERRERELREAAR 219
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 33.1 bits (74), Expect = 0.19
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 139 WGRLLEQVGTMALWASQREKEVLRRERAVEWRER--AVEKRERALEEVERAI----LEMK 192
W RL +V + + Q E+ + + E V+ RE+ A E R +E ++ + L+++
Sbjct: 827 WWRLFTKVKPLLQVSRQEEEMMAKEEELVKVREKQLAAENRLTEMETLQSQLMAEKLQLQ 886
Query: 193 WKVRAEKEACQREKELPA 210
+++AE E C +EL A
Sbjct: 887 EQLQAETELCAEAEELRA 904
>gi|42476130 ubiquitin interaction motif containing 1 [Homo sapiens]
Length = 719
Score = 33.1 bits (74), Expect = 0.19
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 17/121 (14%)
Query: 69 GHHPNQYATCRLCGRQVSRGPGVNVGTTALWKHLKSMHREELEKSGHGQAGQRQDPRPHG 128
G PNQY LC +V + K LK R+ L K G G+ PRP
Sbjct: 286 GVDPNQYTKVILCQLEVYQ------------KSLKMAQRQLLNKKGFGEPVL---PRP-- 328
Query: 129 PQLPTGIEGNWGRLLEQVGTMALWASQREKEVLRRERAVEWRERAVEKRERALEEVERAI 188
P L G + E+ ++ +KE + RA +W + + +E +++ ++ +
Sbjct: 329 PSLIQNECGQGEQASEKNECISEDMGDEDKEERQESRASDWHSKTKDFQESSIKSLKEKL 388
Query: 189 L 189
L
Sbjct: 389 L 389
>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform
b [Homo sapiens]
Length = 1524
Score = 33.1 bits (74), Expect = 0.19
Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 157 EKEVLRRERA--VEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKE 207
EK L+RE+A +E +++ E +E+ EE+++ + E + K + EKE + E+E
Sbjct: 323 EKAKLKREKADALEAKKKEKEDKEKKREELKKIVEEERLKKKEEKERLKVERE 375
>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform
a [Homo sapiens]
Length = 1556
Score = 33.1 bits (74), Expect = 0.19
Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 157 EKEVLRRERA--VEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKE 207
EK L+RE+A +E +++ E +E+ EE+++ + E + K + EKE + E+E
Sbjct: 323 EKAKLKREKADALEAKKKEKEDKEKKREELKKIVEEERLKKKEEKERLKVERE 375
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,174,548
Number of Sequences: 37866
Number of extensions: 515917
Number of successful extensions: 4844
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 114
Number of HSP's that attempted gapping in prelim test: 3844
Number of HSP's gapped (non-prelim): 1068
length of query: 218
length of database: 18,247,518
effective HSP length: 98
effective length of query: 120
effective length of database: 14,536,650
effective search space: 1744398000
effective search space used: 1744398000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.