Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 56790919
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56790919 haspin [Homo sapiens]
(798 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56790919 haspin [Homo sapiens] 1622 0.0
gi|116805350 homeo box (H6 family) 1 [Homo sapiens] 51 4e-06
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 49 2e-05
gi|110349738 serine/threonine kinase 24 isoform b [Homo sapiens] 44 8e-04
gi|20070158 serine/threonine kinase 24 isoform a [Homo sapiens] 44 8e-04
gi|218505833 TRAF4 associated factor 1 isoform c [Homo sapiens] 42 0.002
gi|218505831 TRAF4 associated factor 1 isoform b [Homo sapiens] 42 0.002
gi|218505827 TRAF4 associated factor 1 isoform a [Homo sapiens] 42 0.002
gi|21361358 serine/threonine kinase 25 [Homo sapiens] 40 0.009
gi|109633026 serine/threonine protein kinase MST4 isoform 3 [Hom... 39 0.015
gi|15011880 serine/threonine protein kinase MST4 isoform 1 [Homo... 39 0.015
gi|48476182 roundabout, axon guidance receptor, homolog 3 [Homo ... 39 0.015
gi|5174647 PTK6 protein tyrosine kinase 6 [Homo sapiens] 39 0.025
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 38 0.042
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 38 0.042
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 38 0.042
gi|126116565 MYC binding protein 2 [Homo sapiens] 37 0.055
gi|157785645 SPEG complex locus [Homo sapiens] 36 0.12
gi|239756899 PREDICTED: hypothetical protein [Homo sapiens] 35 0.21
gi|113427491 PREDICTED: hypothetical protein [Homo sapiens] 35 0.21
gi|239745902 PREDICTED: hypothetical protein [Homo sapiens] 35 0.21
gi|32483399 p21-activated kinase 2 [Homo sapiens] 35 0.27
gi|29648305 zinc finger, CCHC domain containing 3 [Homo sapiens] 35 0.27
gi|169171690 PREDICTED: hypothetical protein [Homo sapiens] 35 0.36
gi|169171833 PREDICTED: hypothetical protein [Homo sapiens] 35 0.36
gi|169171083 PREDICTED: hypothetical protein [Homo sapiens] 35 0.36
gi|239508966 PREDICTED: hypothetical protein [Homo sapiens] 35 0.36
gi|30039692 NIMA-related kinase 8 [Homo sapiens] 35 0.36
gi|58331144 proline rich region 18 [Homo sapiens] 35 0.36
gi|207113133 hypothetical protein LOC729085 [Homo sapiens] 35 0.36
>gi|56790919 haspin [Homo sapiens]
Length = 798
Score = 1622 bits (4201), Expect = 0.0
Identities = 798/798 (100%), Positives = 798/798 (100%)
Query: 1 MAASLPGPGSRLFRTYGAADGRRQRRPGREAAQWFPPQDRRRFFNSSGSSDASIGDPSQS 60
MAASLPGPGSRLFRTYGAADGRRQRRPGREAAQWFPPQDRRRFFNSSGSSDASIGDPSQS
Sbjct: 1 MAASLPGPGSRLFRTYGAADGRRQRRPGREAAQWFPPQDRRRFFNSSGSSDASIGDPSQS 60
Query: 61 DDPDDPDDPDFPGSPVRRRRRRPGGRVPKDRPSLTVTPKRWKLRARPSLTVTPRRLGLRA 120
DDPDDPDDPDFPGSPVRRRRRRPGGRVPKDRPSLTVTPKRWKLRARPSLTVTPRRLGLRA
Sbjct: 61 DDPDDPDDPDFPGSPVRRRRRRPGGRVPKDRPSLTVTPKRWKLRARPSLTVTPRRLGLRA 120
Query: 121 RPPQKCSTPCGPLRLPPFPSRDSGRLSPDLSVCGQPRDGDELGISASLFSSLASPCPGSP 180
RPPQKCSTPCGPLRLPPFPSRDSGRLSPDLSVCGQPRDGDELGISASLFSSLASPCPGSP
Sbjct: 121 RPPQKCSTPCGPLRLPPFPSRDSGRLSPDLSVCGQPRDGDELGISASLFSSLASPCPGSP 180
Query: 181 TPRDSVISIGTSACLVAASAVPSGLHLPEVSLDRASLPCSQEEATGGAKDTRMVHQTRAS 240
TPRDSVISIGTSACLVAASAVPSGLHLPEVSLDRASLPCSQEEATGGAKDTRMVHQTRAS
Sbjct: 181 TPRDSVISIGTSACLVAASAVPSGLHLPEVSLDRASLPCSQEEATGGAKDTRMVHQTRAS 240
Query: 241 LRSVLFGLMNSGTPEDSEFRADGKNMRESCCKRKLVVGNGPEGPGLSSTGKRRATGQDSC 300
LRSVLFGLMNSGTPEDSEFRADGKNMRESCCKRKLVVGNGPEGPGLSSTGKRRATGQDSC
Sbjct: 241 LRSVLFGLMNSGTPEDSEFRADGKNMRESCCKRKLVVGNGPEGPGLSSTGKRRATGQDSC 300
Query: 301 QERGLQEAVRREHQEASVPKGRIVPRGIDRLERTRSSRKSKHQEATETSLLHSHRFKKGQ 360
QERGLQEAVRREHQEASVPKGRIVPRGIDRLERTRSSRKSKHQEATETSLLHSHRFKKGQ
Sbjct: 301 QERGLQEAVRREHQEASVPKGRIVPRGIDRLERTRSSRKSKHQEATETSLLHSHRFKKGQ 360
Query: 361 KLGKDSFPTQDLTPLQNVCFWTKTRASFSFHKKKIVTDVSEVCSIYTTATSLSGSLLSEC 420
KLGKDSFPTQDLTPLQNVCFWTKTRASFSFHKKKIVTDVSEVCSIYTTATSLSGSLLSEC
Sbjct: 361 KLGKDSFPTQDLTPLQNVCFWTKTRASFSFHKKKIVTDVSEVCSIYTTATSLSGSLLSEC 420
Query: 421 SNRPVMNRTSGAPSSWHSSSMYLLSPLNTLSISNKKASDAEKVYGECSQKGPVPFSHCLP 480
SNRPVMNRTSGAPSSWHSSSMYLLSPLNTLSISNKKASDAEKVYGECSQKGPVPFSHCLP
Sbjct: 421 SNRPVMNRTSGAPSSWHSSSMYLLSPLNTLSISNKKASDAEKVYGECSQKGPVPFSHCLP 480
Query: 481 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISK 540
TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISK
Sbjct: 481 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISK 540
Query: 541 ELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLF 600
ELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLF
Sbjct: 541 ELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLF 600
Query: 601 IVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKT 660
IVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKT
Sbjct: 601 IVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKT 660
Query: 661 SLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDGDYQFD 720
SLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDGDYQFD
Sbjct: 661 SLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDGDYQFD 720
Query: 721 IYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRT 780
IYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRT
Sbjct: 721 IYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRT 780
Query: 781 MLNFSSATDLLCQHSLFK 798
MLNFSSATDLLCQHSLFK
Sbjct: 781 MLNFSSATDLLCQHSLFK 798
>gi|116805350 homeo box (H6 family) 1 [Homo sapiens]
Length = 348
Score = 51.2 bits (121), Expect = 4e-06
Identities = 55/188 (29%), Positives = 78/188 (41%), Gaps = 27/188 (14%)
Query: 46 SSGSSDASIGDPSQSDDPDDPDDPDFPGSPVRRRRRRPGGRVPKDRPSLTVTPKRWKLRA 105
+ G+ A+ GD S+ D+ +D DDP+ + RRR R+ + R L T + RA
Sbjct: 29 AKGAGRATQGDGSREDEEEDDDDPEDEDAEQARRR-----RLQRRRQLLAGTGPGGEARA 83
Query: 106 RPSLTVTPRRLGLRARPPQKCSTP----CGPLR--LPPFPSRDSGRLSPDLSVCGQPRDG 159
R L P LGL RPP P CG P G LSPD S P G
Sbjct: 84 RALL--GPGALGLGPRPPPGPGPPFALGCGGAARWYPRAHGGYGGGLSPDTSDRDSPETG 141
Query: 160 DELGISASLFSSLASPCPGSPTPRDSVISIGTSACLVAASAVPSGLHLPEVSLDRASLPC 219
+E+G + + P PG ++ A +AA +G E + + A +P
Sbjct: 142 EEMGRAEGAWP--RGPGPG---------AVQREAAELAARGPAAG---TEEASELAEVPA 187
Query: 220 SQEEATGG 227
+ E GG
Sbjct: 188 AAGETRGG 195
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 48.5 bits (114), Expect = 2e-05
Identities = 66/235 (28%), Positives = 85/235 (36%), Gaps = 43/235 (18%)
Query: 68 DPDFPGSPVRRRRRRPGGRVPKDRPSLTVTPKRWKLRARPSLTVTPRRLGLRARPPQKCS 127
DPDFP P RR RRP P+ PS +P L+ P L V P + A P
Sbjct: 1903 DPDFPAPP--RRSRRPSPLAPRPPPSRWASP---PLKTSPQLRVPPPTSVVTALTPTSGE 1957
Query: 128 -TPCGPLRLPPFPSRDSGRLSPDLSVCGQPRDGDELGISASLFSSLASPCPGSPTPRDSV 186
P GP PP P D G D+ V G+SA+ AS P +
Sbjct: 1958 LAPPGPAPSPP-PPEDLGPDFEDMEVVS--------GLSAADLDFAASLLGTEPFQEE-- 2006
Query: 187 ISIGTSACLVAASAVPSGLHLPEVSLDRASLPCSQEEATGGAKDTRMVHQTRASLRSVLF 246
+VAA A+ S P S + S P S R +H + +
Sbjct: 2007 --------IVAAGAMGSSHGGPGDSSEEESSPTS-----------RYIHFPVTVVSAP-- 2045
Query: 247 GLMNSGTP-----EDSEFRADGKNMRESCCKRKLVVGNGPEGPGLSSTGKRRATG 296
GL S TP E + DG + ++ G P GPG+ G A G
Sbjct: 2046 GLAPSATPGAPRIEQLDGVDDGTDSEAEAVQQPRGQGTPPSGPGVVRAGVLGAAG 2100
>gi|110349738 serine/threonine kinase 24 isoform b [Homo sapiens]
Length = 431
Score = 43.5 bits (101), Expect = 8e-04
Identities = 49/188 (26%), Positives = 75/188 (39%), Gaps = 49/188 (26%)
Query: 480 PTEKLQRCEKIGEGVFGEVFQTIADHTP--VAIKIIAIEGPDLVNGSHQKTFEEILPEII 537
P E + EKIG+G FGEVF+ I + T VAIKII +E + E+I EI
Sbjct: 20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE-------EAEDEIEDIQQEIT 72
Query: 538 ISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDD 597
+ + P + K +Y S + KD
Sbjct: 73 VLSQCD--------------------------SPYVTK---YYGS----------YLKDT 93
Query: 598 QLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLL 657
+L+I++E+ GG L+ + +IL ++ L + + HRD+ NVLL
Sbjct: 94 KLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI-HRDIKAANVLL 152
Query: 658 KKTSLKKL 665
+ KL
Sbjct: 153 SEHGEVKL 160
>gi|20070158 serine/threonine kinase 24 isoform a [Homo sapiens]
Length = 443
Score = 43.5 bits (101), Expect = 8e-04
Identities = 49/188 (26%), Positives = 75/188 (39%), Gaps = 49/188 (26%)
Query: 480 PTEKLQRCEKIGEGVFGEVFQTIADHTP--VAIKIIAIEGPDLVNGSHQKTFEEILPEII 537
P E + EKIG+G FGEVF+ I + T VAIKII +E + E+I EI
Sbjct: 32 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE-------EAEDEIEDIQQEIT 84
Query: 538 ISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDD 597
+ + P + K +Y S + KD
Sbjct: 85 VLSQCD--------------------------SPYVTK---YYGS----------YLKDT 105
Query: 598 QLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLL 657
+L+I++E+ GG L+ + +IL ++ L + + HRD+ NVLL
Sbjct: 106 KLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI-HRDIKAANVLL 164
Query: 658 KKTSLKKL 665
+ KL
Sbjct: 165 SEHGEVKL 172
>gi|218505833 TRAF4 associated factor 1 isoform c [Homo sapiens]
Length = 241
Score = 42.4 bits (98), Expect = 0.002
Identities = 46/188 (24%), Positives = 75/188 (39%), Gaps = 20/188 (10%)
Query: 172 LASPCPGSPTPRD--SVISIGTSACLVAASAVPSGLHLPEVSLDRASLPCSQEEATGGAK 229
L++ C P P + +A L + V +G L E D C Q+ G +
Sbjct: 18 LSTECDSHPLPPSYRKFLFETQAADLAGGTTVAAGNLLNESEKD-----CGQDRRAPGVQ 72
Query: 230 DTRMVHQTRASLRSVLFGL-----MNSGTPEDSEFRADGKNMRESCCKR----KLVVGNG 280
R+V T S+ ++ L ++ G P D++ RA K++ K K + G
Sbjct: 73 PCRLV--TMTSVVKTVYSLQPPSALSGGQPADTQTRATSKSLLPVRSKEVDVSKQLHSGG 130
Query: 281 PEGPGLSSTGKRRATGQDSCQERGLQEAVRREHQEASVPKGRIVPRGIDRLERTRSSRKS 340
PE T RR GQ + + VR+ ++ S K + D+ + + K
Sbjct: 131 PENDVTKITKLRRENGQMKATDTATRRNVRKGYKPLSKQKSEEELK--DKNQLLEAVNKQ 188
Query: 341 KHQEATET 348
HQ+ TET
Sbjct: 189 LHQKLTET 196
>gi|218505831 TRAF4 associated factor 1 isoform b [Homo sapiens]
Length = 286
Score = 42.4 bits (98), Expect = 0.002
Identities = 46/188 (24%), Positives = 75/188 (39%), Gaps = 20/188 (10%)
Query: 172 LASPCPGSPTPRD--SVISIGTSACLVAASAVPSGLHLPEVSLDRASLPCSQEEATGGAK 229
L++ C P P + +A L + V +G L E D C Q+ G +
Sbjct: 18 LSTECDSHPLPPSYRKFLFETQAADLAGGTTVAAGNLLNESEKD-----CGQDRRAPGVQ 72
Query: 230 DTRMVHQTRASLRSVLFGL-----MNSGTPEDSEFRADGKNMRESCCKR----KLVVGNG 280
R+V T S+ ++ L ++ G P D++ RA K++ K K + G
Sbjct: 73 PCRLV--TMTSVVKTVYSLQPPSALSGGQPADTQTRATSKSLLPVRSKEVDVSKQLHSGG 130
Query: 281 PEGPGLSSTGKRRATGQDSCQERGLQEAVRREHQEASVPKGRIVPRGIDRLERTRSSRKS 340
PE T RR GQ + + VR+ ++ S K + D+ + + K
Sbjct: 131 PENDVTKITKLRRENGQMKATDTATRRNVRKGYKPLSKQKSEEELK--DKNQLLEAVNKQ 188
Query: 341 KHQEATET 348
HQ+ TET
Sbjct: 189 LHQKLTET 196
>gi|218505827 TRAF4 associated factor 1 isoform a [Homo sapiens]
Length = 316
Score = 42.4 bits (98), Expect = 0.002
Identities = 46/188 (24%), Positives = 75/188 (39%), Gaps = 20/188 (10%)
Query: 172 LASPCPGSPTPRD--SVISIGTSACLVAASAVPSGLHLPEVSLDRASLPCSQEEATGGAK 229
L++ C P P + +A L + V +G L E D C Q+ G +
Sbjct: 18 LSTECDSHPLPPSYRKFLFETQAADLAGGTTVAAGNLLNESEKD-----CGQDRRAPGVQ 72
Query: 230 DTRMVHQTRASLRSVLFGL-----MNSGTPEDSEFRADGKNMRESCCKR----KLVVGNG 280
R+V T S+ ++ L ++ G P D++ RA K++ K K + G
Sbjct: 73 PCRLV--TMTSVVKTVYSLQPPSALSGGQPADTQTRATSKSLLPVRSKEVDVSKQLHSGG 130
Query: 281 PEGPGLSSTGKRRATGQDSCQERGLQEAVRREHQEASVPKGRIVPRGIDRLERTRSSRKS 340
PE T RR GQ + + VR+ ++ S K + D+ + + K
Sbjct: 131 PENDVTKITKLRRENGQMKATDTATRRNVRKGYKPLSKQKSEEELK--DKNQLLEAVNKQ 188
Query: 341 KHQEATET 348
HQ+ TET
Sbjct: 189 LHQKLTET 196
>gi|21361358 serine/threonine kinase 25 [Homo sapiens]
Length = 426
Score = 40.0 bits (92), Expect = 0.009
Identities = 46/188 (24%), Positives = 73/188 (38%), Gaps = 49/188 (26%)
Query: 480 PTEKLQRCEKIGEGVFGEVFQTIADHTP--VAIKIIAIEGPDLVNGSHQKTFEEILPEII 537
P E + ++IG+G FGEV++ I +HT VAIKII +E + E+I EI
Sbjct: 16 PEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLE-------EAEDEIEDIQQEIT 68
Query: 538 ISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDD 597
+ LS R G + K
Sbjct: 69 V---LSQCDSPYITRYFG------------------------------------SYLKST 89
Query: 598 QLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLL 657
+L+I++E+ GG L+ ++ +IL ++ L + + HRD+ NVLL
Sbjct: 90 KLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKI-HRDIKAANVLL 148
Query: 658 KKTSLKKL 665
+ KL
Sbjct: 149 SEQGDVKL 156
>gi|109633026 serine/threonine protein kinase MST4 isoform 3 [Homo
sapiens]
Length = 354
Score = 39.3 bits (90), Expect = 0.015
Identities = 47/188 (25%), Positives = 74/188 (39%), Gaps = 49/188 (26%)
Query: 480 PTEKLQRCEKIGEGVFGEVFQTIADHTP--VAIKIIAIEGPDLVNGSHQKTFEEILPEII 537
P E + E+IG+G FGEVF+ I + T VAIKII +E + E+I EI
Sbjct: 20 PEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLE-------EAEDEIEDIQQEIT 72
Query: 538 ISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDD 597
+ + SY +Y S + K
Sbjct: 73 VLSQ-----------------------CDSSY------VTKYYGS----------YLKGS 93
Query: 598 QLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLL 657
+L+I++E+ GG L+ +R ++L ++ L + + HRD+ NVLL
Sbjct: 94 KLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKI-HRDIKAANVLL 152
Query: 658 KKTSLKKL 665
+ KL
Sbjct: 153 SEQGDVKL 160
>gi|15011880 serine/threonine protein kinase MST4 isoform 1 [Homo
sapiens]
Length = 416
Score = 39.3 bits (90), Expect = 0.015
Identities = 47/188 (25%), Positives = 74/188 (39%), Gaps = 49/188 (26%)
Query: 480 PTEKLQRCEKIGEGVFGEVFQTIADHTP--VAIKIIAIEGPDLVNGSHQKTFEEILPEII 537
P E + E+IG+G FGEVF+ I + T VAIKII +E + E+I EI
Sbjct: 20 PEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLE-------EAEDEIEDIQQEIT 72
Query: 538 ISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDD 597
+ + SY +Y S + K
Sbjct: 73 VLSQ-----------------------CDSSY------VTKYYGS----------YLKGS 93
Query: 598 QLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLL 657
+L+I++E+ GG L+ +R ++L ++ L + + HRD+ NVLL
Sbjct: 94 KLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKI-HRDIKAANVLL 152
Query: 658 KKTSLKKL 665
+ KL
Sbjct: 153 SEQGDVKL 160
>gi|48476182 roundabout, axon guidance receptor, homolog 3 [Homo
sapiens]
Length = 1386
Score = 39.3 bits (90), Expect = 0.015
Identities = 30/120 (25%), Positives = 44/120 (36%), Gaps = 1/120 (0%)
Query: 30 EAAQWFPPQDRRRFFNSSGSSDASIGDPSQSDDPDDPDDPDFPGSPVRRRRRRPGGRVPK 89
E +W PP R SS + PS+ + P + + P
Sbjct: 1109 EPEEWCPPMPERSHLTEPSSSGGCLVTPSRRETPSPTPSYGQQSTATLTPSPPDPPQPPT 1168
Query: 90 DRPSLTVTPKRWKLRARPSLTVTPRRLGLR-ARPPQKCSTPCGPLRLPPFPSRDSGRLSP 148
D P L P+R L L+V+ LG+R ARP + P L P P+ + +P
Sbjct: 1169 DMPHLHQMPRRVPLGPSSPLSVSQPMLGIREARPAGLGAGPAASPHLSPSPAPSTASSAP 1228
>gi|5174647 PTK6 protein tyrosine kinase 6 [Homo sapiens]
Length = 451
Score = 38.5 bits (88), Expect = 0.025
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 467 CSQKGPVPFSHC----LPTEKLQRCEKIGEGVFGEVFQTI-ADHTPVAIKIIA 514
C + P P H P E+ C K+G G FGEVF+ + D VAIK+I+
Sbjct: 170 CRKHEPEPLPHWDDWERPREEFTLCRKLGSGYFGEVFEGLWKDRVQVAIKVIS 222
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 37.7 bits (86), Expect = 0.042
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 13/132 (9%)
Query: 36 PPQDRRRFFNSSGSSDASIGDPSQSDDPDDPDDP--DFPGSPVRRRRRRPGGRVPKDRPS 93
PP+ +RR S S P++ D + + P GS RR + + PS
Sbjct: 709 PPRPKRR------SHSLSRPGPTEGDAEGEAEGPVGSTLGSYATLTRRPGRSALVRTSPS 762
Query: 94 LTVTPKRWKLRARPSLTVTPRRLGLRARPPQKCSTPCGPLRLPP----FPSRDSGRLSPD 149
+T TP R R++ S + RR G PP++ S+ GP PP P G P
Sbjct: 763 VTPTPARGTPRSQ-SFALRARRKGPPPPPPKRLSSVSGPSPEPPPLDESPGPKEGATGPR 821
Query: 150 LSVCGQPRDGDE 161
+P E
Sbjct: 822 RRTLSEPAGPSE 833
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 37.7 bits (86), Expect = 0.042
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 13/132 (9%)
Query: 36 PPQDRRRFFNSSGSSDASIGDPSQSDDPDDPDDP--DFPGSPVRRRRRRPGGRVPKDRPS 93
PP+ +RR S S P++ D + + P GS RR + + PS
Sbjct: 791 PPRPKRR------SHSLSRPGPTEGDAEGEAEGPVGSTLGSYATLTRRPGRSALVRTSPS 844
Query: 94 LTVTPKRWKLRARPSLTVTPRRLGLRARPPQKCSTPCGPLRLPP----FPSRDSGRLSPD 149
+T TP R R++ S + RR G PP++ S+ GP PP P G P
Sbjct: 845 VTPTPARGTPRSQ-SFALRARRKGPPPPPPKRLSSVSGPSPEPPPLDESPGPKEGATGPR 903
Query: 150 LSVCGQPRDGDE 161
+P E
Sbjct: 904 RRTLSEPAGPSE 915
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 37.7 bits (86), Expect = 0.042
Identities = 47/156 (30%), Positives = 59/156 (37%), Gaps = 27/156 (17%)
Query: 6 PGPGSRLFRTYGAADGRRQRRPGREAAQWFPPQDRRRFFNSSGSSDASIGDPSQSDDPDD 65
P P R T + GRR+R P PP RRR S + P + P
Sbjct: 531 PSPRKRQKET--SPRGRRRRSPS-------PPPTRRR------RSPSPAPPPRRRRTPTP 575
Query: 66 PDDPDFPGSPVRRRRRRPGGRVP--KDRPSLTVTPKRW--------KLRARPSLTVTPRR 115
P P P RRR P P + R S + PKR K RA PS P+R
Sbjct: 576 PPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPS--PPPKR 633
Query: 116 LGLRARPPQKCSTPCGPLRLPPFPSRDSGRLSPDLS 151
+ PP++ S+P R P S+ SP S
Sbjct: 634 RVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRS 669
Score = 36.2 bits (82), Expect = 0.12
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 14/119 (11%)
Query: 38 QDRRRFFNSSGSSDASIGDPSQSDDPDDPDDPDFPGSPVRRRRRRPGGRV---------- 87
Q RR++ + S + G S S+D + P V RRRR R
Sbjct: 480 QQRRQYRRQNQQSSSDSGSSSSSED-ERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQK 538
Query: 88 ---PKDRPSLTVTPKRWKLRARPSLTVTPRRLGLRARPPQKCSTPCGPLRLPPFPSRDS 143
P+ R + +P + R PS PRR PP++ + P R P P R S
Sbjct: 539 ETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYS 597
Score = 31.6 bits (70), Expect = 3.0
Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 11/105 (10%)
Query: 22 RRQRRPGREAAQWFPPQDRRRFFNS-SGSSDASIGDPSQSDDPDDPDDPDFP-------- 72
RR P R P + RRR S SGSS +S S+S P P
Sbjct: 330 RRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLS 389
Query: 73 --GSPVRRRRRRPGGRVPKDRPSLTVTPKRWKLRARPSLTVTPRR 115
SP RRR R P + + TP++ + ++V+P R
Sbjct: 390 PSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGR 434
>gi|126116565 MYC binding protein 2 [Homo sapiens]
Length = 4640
Score = 37.4 bits (85), Expect = 0.055
Identities = 47/211 (22%), Positives = 85/211 (40%), Gaps = 28/211 (13%)
Query: 437 HSSSMYLLSPLNTLSISNKKA-----SDAEKVYGECSQKGPVPFSHCLPTEKLQRCEKIG 491
H + L P NTL + K ++ K+ G+ S V E L+ I
Sbjct: 3811 HIIKIELKGPENTLRVRQVKVLGWKDGESTKIAGQISAS--VAQQRNCEAETLRVFRLIT 3868
Query: 492 EGVFGEVFQTIADHTPVAIKIIAIEGPD----LVNGSHQKTFEEILPEIIISK-ELSLLS 546
VFG++ A+ TP + + P+ + N + +E + II S+ +L+ L
Sbjct: 3869 SQVFGKLISGDAEPTPEQEEKALLSSPEGEEKVYNATSDADLKEHMVGIIFSRSKLTNLQ 3928
Query: 547 GEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRP-------DFFKDDQL 599
+VC I + + + + W+H S+K +AN +P D + + L
Sbjct: 3929 KQVCAHIVQAIRMEATR---------VREEWEHAISSKENANSQPNDEDASSDAYCFELL 3979
Query: 600 FIVLEFEFGGIDLEQMRTKLSSLATAKSILH 630
+VL + + + +L+ L S+LH
Sbjct: 3980 SMVLALSGSNVGRQYLAQQLTLLQDLFSLLH 4010
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 36.2 bits (82), Expect = 0.12
Identities = 65/225 (28%), Positives = 84/225 (37%), Gaps = 28/225 (12%)
Query: 17 GAADGR-RQRRPGREAAQWFPPQDRRRFFNSSGSSDASIGDPSQSDDPDDPDDPDFPGSP 75
G A+ R R RR G RR S S S PS P P P +P
Sbjct: 2134 GEAEPRGRHRRAGAPLEIPVARLGARRLQESPSLSALSEAQPSSPARPSAPK----PSTP 2189
Query: 76 VRRRRRRPGGRVPKDRPSLTVTPKRWKLRARPSLTVTPRRLGLRARPPQKCSTPCGPLRL 135
+ P P D P P+ + +A P P R A PPQ T L L
Sbjct: 2190 ---KSAEPSATTPSDAPQ-PPAPQPAQDKA-PEPRPEPVRASKPAPPPQALQT----LAL 2240
Query: 136 PPFPSRDSGRLSPDLSVCGQ---PRDGDELGIS-----ASLFSSLASPCPGSPTPRDSVI 187
P P ++ L + G P G S A++F+ +ASP PG+P R V
Sbjct: 2241 PLTPY---AQIIQSLQLSGHAQGPSQGPAAPPSEPKPHAAVFARVASPPPGAPEKR--VP 2295
Query: 188 SIGTSACLVAASAVPSGLHLPEVSLDRASLPCSQEEATGGAKDTR 232
S G L + VP+ P SL +S+ + EA AK R
Sbjct: 2296 SAGGPPVLAEKARVPTVPPRPGSSLS-SSIENLESEAVFEAKFKR 2339
>gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 35.4 bits (80), Expect = 0.21
Identities = 30/104 (28%), Positives = 39/104 (37%), Gaps = 7/104 (6%)
Query: 55 GDPSQSDDPDDPDDPDFPGSPVRRRRRRPGGRVPKDRPSLTVTPKRWKLRARPSLTVTPR 114
GDP + P P+D D G RRP P+ R + R
Sbjct: 62 GDPGVAPSPPAPEDSDARGEDGAAAERRP---EPRTRDLSGARGQTTGGEGREGAQTREG 118
Query: 115 RLGL--RARPPQKCSTPCGPLRLPPFPSRDSGRLSPDLSVCGQP 156
++GL AR P+ TP P R P P GR++P G P
Sbjct: 119 KMGLPDSARRPRAPRTPLRPER--PAPGVPGGRVAPCTCTSGSP 160
>gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 35.4 bits (80), Expect = 0.21
Identities = 30/104 (28%), Positives = 39/104 (37%), Gaps = 7/104 (6%)
Query: 55 GDPSQSDDPDDPDDPDFPGSPVRRRRRRPGGRVPKDRPSLTVTPKRWKLRARPSLTVTPR 114
GDP + P P+D D G RRP P+ R + R
Sbjct: 62 GDPGVAPSPPAPEDSDARGEDGAAAERRP---EPRTRDLSGARGQTTGGEGREGAQTREG 118
Query: 115 RLGL--RARPPQKCSTPCGPLRLPPFPSRDSGRLSPDLSVCGQP 156
++GL AR P+ TP P R P P GR++P G P
Sbjct: 119 KMGLPDSARRPRAPRTPLRPER--PAPGVPGGRVAPCTCTSGSP 160
>gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 35.4 bits (80), Expect = 0.21
Identities = 30/104 (28%), Positives = 39/104 (37%), Gaps = 7/104 (6%)
Query: 55 GDPSQSDDPDDPDDPDFPGSPVRRRRRRPGGRVPKDRPSLTVTPKRWKLRARPSLTVTPR 114
GDP + P P+D D G RRP P+ R + R
Sbjct: 62 GDPGVAPSPPAPEDSDARGEDGAAAERRP---EPRTRDLSGARGQTTGGEGREGAQTREG 118
Query: 115 RLGL--RARPPQKCSTPCGPLRLPPFPSRDSGRLSPDLSVCGQP 156
++GL AR P+ TP P R P P GR++P G P
Sbjct: 119 KMGLPDSARRPRAPRTPLRPER--PAPGVPGGRVAPCTCTSGSP 160
>gi|32483399 p21-activated kinase 2 [Homo sapiens]
Length = 524
Score = 35.0 bits (79), Expect = 0.27
Identities = 47/188 (25%), Positives = 69/188 (36%), Gaps = 50/188 (26%)
Query: 480 PTEKLQRCEKIGEGVFGEVFQT--IADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEII 537
P +K R EKIG+G G VF +A VAIK +N Q E I+ EI+
Sbjct: 245 PKKKYTRYEKIGQGASGTVFTATDVALGQEVAIK--------QINLQKQPKKELIINEIL 296
Query: 538 ISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDD 597
+ KEL P ++ D Y D
Sbjct: 297 VMKELK--------------------------NPNIVNFLDSY-------------LVGD 317
Query: 598 QLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLL 657
+LF+V+E+ GG + + A ++ + +L A+ + HRD+ NVLL
Sbjct: 318 ELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHAN-QVIHRDIKSDNVLL 376
Query: 658 KKTSLKKL 665
KL
Sbjct: 377 GMEGSVKL 384
>gi|29648305 zinc finger, CCHC domain containing 3 [Homo sapiens]
Length = 403
Score = 35.0 bits (79), Expect = 0.27
Identities = 32/126 (25%), Positives = 47/126 (37%), Gaps = 8/126 (6%)
Query: 36 PPQDRRRFFNSSGSSDASIGDPSQSDDPDDPDDPDFPGSPVRRRRRRPGGRV--PKDRPS 93
P RR + G A +G P+ PD D P + RRR P G P+ +
Sbjct: 57 PRPPRREEESGGGGGSAGLGGPAGLAAPDLGDFPPAGRGDPKGRRRDPAGEAVDPRKKKG 116
Query: 94 LTVTPKRWKLRARPSLTVTPRRLGLRARPPQKCSTPCGPLRLPPFPSRDSGRLSPDLSVC 153
+R K A + TP ARP + PL+ P + G+ + +C
Sbjct: 117 AAEAGRRKKAEAAAAAMATP------ARPGEAEDAAERPLQDEPAAAAGPGKGRFLVRIC 170
Query: 154 GQPRDG 159
Q +G
Sbjct: 171 FQGDEG 176
>gi|169171690 PREDICTED: hypothetical protein [Homo sapiens]
Length = 157
Score = 34.7 bits (78), Expect = 0.36
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 11/85 (12%)
Query: 73 GSPVRRRRRRPG-----GRVPK-----DRPSLTVTPKRWKLRARPSLTVTPRRLGLRARP 122
G P+RR R RPG G VP+ RP+ T +++ R ++ PRR ++P
Sbjct: 28 GRPLRRSRARPGPCPPEGLVPRAPPPGPRPTAAATRATFRVPERRTVPPCPRRPARPSQP 87
Query: 123 PQKCSTPCGPLRLPP-FPSRDSGRL 146
P L PP P D+G L
Sbjct: 88 PSAARRERALLANPPQRPRGDAGAL 112
>gi|169171833 PREDICTED: hypothetical protein [Homo sapiens]
Length = 157
Score = 34.7 bits (78), Expect = 0.36
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 11/85 (12%)
Query: 73 GSPVRRRRRRPG-----GRVPK-----DRPSLTVTPKRWKLRARPSLTVTPRRLGLRARP 122
G P+RR R RPG G VP+ RP+ T +++ R ++ PRR ++P
Sbjct: 28 GRPLRRSRARPGPCPPEGLVPRAPPPGPRPTAAATRATFRVPERRTVPPCPRRPARPSQP 87
Query: 123 PQKCSTPCGPLRLPP-FPSRDSGRL 146
P L PP P D+G L
Sbjct: 88 PSAARRERALLANPPQRPRGDAGAL 112
>gi|169171083 PREDICTED: hypothetical protein [Homo sapiens]
Length = 157
Score = 34.7 bits (78), Expect = 0.36
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 11/85 (12%)
Query: 73 GSPVRRRRRRPG-----GRVPK-----DRPSLTVTPKRWKLRARPSLTVTPRRLGLRARP 122
G P+RR R RPG G VP+ RP+ T +++ R ++ PRR ++P
Sbjct: 28 GRPLRRSRARPGPCPPEGLVPRAPPPGPRPTAAATRATFRVPERRTVPPCPRRPARPSQP 87
Query: 123 PQKCSTPCGPLRLPP-FPSRDSGRL 146
P L PP P D+G L
Sbjct: 88 PSAARRERALLANPPQRPRGDAGAL 112
>gi|239508966 PREDICTED: hypothetical protein [Homo sapiens]
Length = 157
Score = 34.7 bits (78), Expect = 0.36
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 11/85 (12%)
Query: 73 GSPVRRRRRRPG-----GRVPK-----DRPSLTVTPKRWKLRARPSLTVTPRRLGLRARP 122
G P+RR R RPG G VP+ RP+ T +++ R ++ PRR ++P
Sbjct: 28 GRPLRRSRARPGPCPPEGLVPRAPPPGPRPTAAATRATFRVPERRTVPPCPRRPARPSQP 87
Query: 123 PQKCSTPCGPLRLPP-FPSRDSGRL 146
P L PP P D+G L
Sbjct: 88 PSAARRERALLANPPQRPRGDAGAL 112
>gi|30039692 NIMA-related kinase 8 [Homo sapiens]
Length = 692
Score = 34.7 bits (78), Expect = 0.36
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 573 LLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILH-- 630
+LK +H N + N F +D L I +E+ GG E ++ + +SL ++ILH
Sbjct: 54 VLKLLNHPNVIEYYEN----FLEDKALMIAMEYAPGGTLAEFIQKRCNSLLEEETILHFF 109
Query: 631 -QLTASLAVAEASLRFEHRDLHWGNVLLKK 659
Q+ +L L HRDL N+LL K
Sbjct: 110 VQILLALHHVHTHL-ILHRDLKTQNILLDK 138
>gi|58331144 proline rich region 18 [Homo sapiens]
Length = 295
Score = 34.7 bits (78), Expect = 0.36
Identities = 40/123 (32%), Positives = 51/123 (41%), Gaps = 23/123 (18%)
Query: 66 PDDPDFPGSPVRRRRRRPGGRVPKDRPSLTVTPKRWKLRARPSLT---------VTPRRL 116
P P G +R +RP G + PS T+ KR R P L V+P+ L
Sbjct: 23 PRRPCAAGDKKKRPPQRPEGLLSSSWPSATL--KRPPARRGPGLDRTQPPAPPGVSPQAL 80
Query: 117 GLRARPPQKCSTPCGPLRLPPFPSRDSGRLSPDLSVCGQPRDGDELGISASLFSSLASPC 176
RAR P C+ PP P+ SG SP + G G +A+ SS A PC
Sbjct: 81 PSRARAPATCA--------PPRPA-GSGH-SPARTTYAATSAG--TGTTAAGTSSGAGPC 128
Query: 177 PGS 179
P S
Sbjct: 129 PDS 131
>gi|207113133 hypothetical protein LOC729085 [Homo sapiens]
Length = 575
Score = 34.7 bits (78), Expect = 0.36
Identities = 41/144 (28%), Positives = 53/144 (36%), Gaps = 25/144 (17%)
Query: 57 PSQSDDPDDPDDPDFPGSPVRRRRRRPGGRVPKDRPSLTVTPKRWKLRARP--SLTVTPR 114
PS DP + G+P R+ + R W+ RA P S+ V
Sbjct: 38 PSAGPDPGPMEPQGVTGAPATHIRQA----LSSSRRQRARNMGFWRSRALPRNSILVCAE 93
Query: 115 RLGLRARPPQKCSTPCGPLRLPPFPSRD---SG--RLS--------------PDLSVCGQ 155
G RAR + +P G LR P RD SG RLS P G
Sbjct: 94 EQGHRARVDRSRESPGGDLRHPGRVRRDITLSGHPRLSTQHVVLLREDEVGDPGTKDLGH 153
Query: 156 PRDGDELGISASLFSSLASPCPGS 179
P+ G + + S +L SP PGS
Sbjct: 154 PQHGSPIQETQSEVVTLVSPLPGS 177
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,284,641
Number of Sequences: 37866
Number of extensions: 1813153
Number of successful extensions: 6837
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 6635
Number of HSP's gapped (non-prelim): 313
length of query: 798
length of database: 18,247,518
effective HSP length: 110
effective length of query: 688
effective length of database: 14,082,258
effective search space: 9688593504
effective search space used: 9688593504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.