Guide to the Human Genome
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Name: GSG2 Sequence: fasta or formatted (798aa) NCBI GI: 56790919
Description:

haspin

Referenced in:

Spindle, M phase, and Meiosis
Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         42           2
 C cysteine            2.6         21           2
 D aspartate           5.8         46           2
 E glutamate           5.1         41           2
 F phenylalanine       4.0         32           2
 G glycine             7.3         58           2
 H histidine           2.6         21           1
 I isoleucine          3.8         30           3
 K lysine              6.1         49           3
 L leucine             9.6         77           3
 M methionine          1.6         13           1
 N asparagine          2.8         22           3
 P proline             6.9         55           2
 Q glutamine           3.8         30           1
 R arginine            8.0         64           6
 S serine             11.4         91           3
 T threonine           5.9         47           2
 V valine              4.8         38           2
 W tryptophan          1.0          8           1
 Y tyrosine            1.6         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   haspin 
HMX1                  0.016   homeo box (H6 family) 1 
MLL4                  0.015   myeloid/lymphoid or mixed-lineage leukemia 4 
STK24                 0.012   serine/threonine kinase 24 isoform b 
STK24                 0.012   serine/threonine kinase 24 isoform a 
C15orf23              0.011   TRAF4 associated factor 1 isoform c 
C15orf23              0.011   TRAF4 associated factor 1 isoform b 
C15orf23              0.011   TRAF4 associated factor 1 isoform a 
STK25                 0.009   serine/threonine kinase 25 
MST4                  0.009   serine/threonine protein kinase MST4 isoform 3 [Hom...
MST4                  0.009   serine/threonine protein kinase MST4 isoform 1 [Homo...
ROBO3                 0.009   roundabout, axon guidance receptor, homolog 3 
PTK6                  0.009   PTK6 protein tyrosine kinase 6 
CASKIN2               0.008   cask-interacting protein 2 isoform b 
CASKIN2               0.008   cask-interacting protein 2 isoform a 
SRRM1                 0.008   serine/arginine repetitive matrix 1 
MYCBP2                0.008   MYC binding protein 2 
SPEG                  0.007   SPEG complex locus 
LOC729417             0.006   PREDICTED: hypothetical protein 
LOC729417             0.006   PREDICTED: hypothetical protein 
LOC729417             0.006   PREDICTED: hypothetical protein 
PAK2                  0.006   p21-activated kinase 2 
ZCCHC3                0.006   zinc finger, CCHC domain containing 3 
LOC100131225          0.006   PREDICTED: hypothetical protein 
LOC100131225          0.006   PREDICTED: hypothetical protein 
LOC100131225          0.006   PREDICTED: hypothetical protein 
LOC100131225          0.006   PREDICTED: hypothetical protein 
NEK8                  0.006   NIMA-related kinase 8 
PRR18                 0.006   proline rich region 18 
LOC729085             0.006   hypothetical protein LOC729085 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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