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Search of human proteins with 56711286
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56711286 hypothetical protein LOC340533 [Homo sapiens]
(1516 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56711286 hypothetical protein LOC340533 [Homo sapiens] 3052 0.0
gi|153792012 DNA polymerase zeta [Homo sapiens] 129 2e-29
gi|87299628 biorientation of chromosomes in cell division 1-like... 48 8e-05
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 43 0.003
gi|28559039 mediator complex subunit 1 [Homo sapiens] 43 0.003
gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens] 39 0.038
gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens] 39 0.038
gi|195976782 Paf1/RNA polymerase II complex component [Homo sapi... 38 0.065
gi|187608516 centaurin, beta 2 [Homo sapiens] 38 0.065
gi|239756261 PREDICTED: similar to hect domain and RLD 2 [Homo s... 37 0.11
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap... 37 0.15
gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sap... 37 0.15
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 37 0.15
gi|4557509 cylicin 2 [Homo sapiens] 37 0.19
gi|109638751 ubiquitin specific protease 6 [Homo sapiens] 37 0.19
gi|239753231 PREDICTED: ankyrin repeat domain 36 [Homo sapiens] 36 0.25
gi|157738621 kinesin family member 13A isoform a [Homo sapiens] 36 0.25
gi|45935385 SAM and SH3 domain containing 1 [Homo sapiens] 36 0.25
gi|156104891 general transcription factor IIF, polypeptide 1, 74... 36 0.25
gi|7661950 SH2 domain binding protein 1 [Homo sapiens] 36 0.25
gi|169166609 PREDICTED: similar to ribonucleic acid binding prot... 36 0.32
gi|113415994 PREDICTED: similar to ribonucleic acid binding prot... 36 0.32
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 36 0.32
gi|104526627 triadin [Homo sapiens] 36 0.32
gi|6857826 RNA-binding protein S1, serine-rich domain [Homo sapi... 36 0.32
gi|18379334 RNA-binding protein S1, serine-rich domain [Homo sap... 36 0.32
gi|212549782 caspase 8 associated protein 2 [Homo sapiens] 35 0.42
gi|6912288 caspase 8 associated protein 2 [Homo sapiens] 35 0.42
gi|212549532 caspase 8 associated protein 2 [Homo sapiens] 35 0.42
gi|7662126 signal-induced proliferation-associated 1 like 1 [Hom... 35 0.42
>gi|56711286 hypothetical protein LOC340533 [Homo sapiens]
Length = 1516
Score = 3052 bits (7913), Expect = 0.0
Identities = 1516/1516 (100%), Positives = 1516/1516 (100%)
Query: 1 MDNQQDKAIVASANGENTLINGVKENDSEDQDVAMKSFAALEAAAPIQPTPVAQKETLMY 60
MDNQQDKAIVASANGENTLINGVKENDSEDQDVAMKSFAALEAAAPIQPTPVAQKETLMY
Sbjct: 1 MDNQQDKAIVASANGENTLINGVKENDSEDQDVAMKSFAALEAAAPIQPTPVAQKETLMY 60
Query: 61 PRGLLPLPSKKPCMQSPPSPLGLIEAPEHAANSASVNAISLTSGIAKGLNTWSLPNECEK 120
PRGLLPLPSKKPCMQSPPSPLGLIEAPEHAANSASVNAISLTSGIAKGLNTWSLPNECEK
Sbjct: 61 PRGLLPLPSKKPCMQSPPSPLGLIEAPEHAANSASVNAISLTSGIAKGLNTWSLPNECEK 120
Query: 121 APFAIMEPAGMSALNGDCLMQPSRTCLGCFMESKDAVDPEPGISLKVGDLNRDYETCAVS 180
APFAIMEPAGMSALNGDCLMQPSRTCLGCFMESKDAVDPEPGISLKVGDLNRDYETCAVS
Sbjct: 121 APFAIMEPAGMSALNGDCLMQPSRTCLGCFMESKDAVDPEPGISLKVGDLNRDYETCAVS 180
Query: 181 DIGIQCINAGENMKYGEQLLSDQLLGFPLHKSRAGDRRETEKPDIDLEDPAQKSYYEALL 240
DIGIQCINAGENMKYGEQLLSDQLLGFPLHKSRAGDRRETEKPDIDLEDPAQKSYYEALL
Sbjct: 181 DIGIQCINAGENMKYGEQLLSDQLLGFPLHKSRAGDRRETEKPDIDLEDPAQKSYYEALL 240
Query: 241 LDKCNTEEALLANSNQDWGYFETFISESKIELLDLCSKNELSVNLFSEEDVDNYMFDDDE 300
LDKCNTEEALLANSNQDWGYFETFISESKIELLDLCSKNELSVNLFSEEDVDNYMFDDDE
Sbjct: 241 LDKCNTEEALLANSNQDWGYFETFISESKIELLDLCSKNELSVNLFSEEDVDNYMFDDDE 300
Query: 301 STLGSDVCSLKIRYESFQDNVRDKTTLLMQEDAQFNFFPSVFTTCPKRESKSGALKQSSD 360
STLGSDVCSLKIRYESFQDNVRDKTTLLMQEDAQFNFFPSVFTTCPKRESKSGALKQSSD
Sbjct: 301 STLGSDVCSLKIRYESFQDNVRDKTTLLMQEDAQFNFFPSVFTTCPKRESKSGALKQSSD 360
Query: 361 FSQFKVPDVSIIWGEEDKNLDKKKGKEEGQEDKGVEKKDGKDNGEKPALNKPCSGTEVEQ 420
FSQFKVPDVSIIWGEEDKNLDKKKGKEEGQEDKGVEKKDGKDNGEKPALNKPCSGTEVEQ
Sbjct: 361 FSQFKVPDVSIIWGEEDKNLDKKKGKEEGQEDKGVEKKDGKDNGEKPALNKPCSGTEVEQ 420
Query: 421 LKNPKQGHLANSLETSGSFSDDSSFIEISYDAMGEIKDCSRYMARDTNSGSSSSQQNYGL 480
LKNPKQGHLANSLETSGSFSDDSSFIEISYDAMGEIKDCSRYMARDTNSGSSSSQQNYGL
Sbjct: 421 LKNPKQGHLANSLETSGSFSDDSSFIEISYDAMGEIKDCSRYMARDTNSGSSSSQQNYGL 480
Query: 481 RAKRKVRYSEDYLYDVDSLEGEKVNERKEWLPVGSKEEDDDEWCPKKRRKVTRKEPPVII 540
RAKRKVRYSEDYLYDVDSLEGEKVNERKEWLPVGSKEEDDDEWCPKKRRKVTRKEPPVII
Sbjct: 481 RAKRKVRYSEDYLYDVDSLEGEKVNERKEWLPVGSKEEDDDEWCPKKRRKVTRKEPPVII 540
Query: 541 KYIIINRFKGEKNMLVKLGKVDASETTVNLSENQLNKYAKLAPLKGFWQKKKKQRNTNTD 600
KYIIINRFKGEKNMLVKLGKVDASETTVNLSENQLNKYAKLAPLKGFWQKKKKQRNTNTD
Sbjct: 541 KYIIINRFKGEKNMLVKLGKVDASETTVNLSENQLNKYAKLAPLKGFWQKKKKQRNTNTD 600
Query: 601 SIKTPFSQKQSFEPGSFEVSFLPPARKRKSKLGNRHRIQRIPSIEISASSKQISLCNDQR 660
SIKTPFSQKQSFEPGSFEVSFLPPARKRKSKLGNRHRIQRIPSIEISASSKQISLCNDQR
Sbjct: 601 SIKTPFSQKQSFEPGSFEVSFLPPARKRKSKLGNRHRIQRIPSIEISASSKQISLCNDQR 660
Query: 661 HASNHKEDGGLKGTLKSAPLGAPSCANGSHLNDITGPDSVKVKAQDTEFKGPERKVLNKI 720
HASNHKEDGGLKGTLKSAPLGAPSCANGSHLNDITGPDSVKVKAQDTEFKGPERKVLNKI
Sbjct: 661 HASNHKEDGGLKGTLKSAPLGAPSCANGSHLNDITGPDSVKVKAQDTEFKGPERKVLNKI 720
Query: 721 KFKSEARLKSKKVKAAGQESKPIVQMSPLLENQSSKANLKNEVIPGTSNSSRLSEFHEAK 780
KFKSEARLKSKKVKAAGQESKPIVQMSPLLENQSSKANLKNEVIPGTSNSSRLSEFHEAK
Sbjct: 721 KFKSEARLKSKKVKAAGQESKPIVQMSPLLENQSSKANLKNEVIPGTSNSSRLSEFHEAK 780
Query: 781 AAKSSTFLPTTCSSEMPLSSANVTTNIPVIPGGYLQTLLDASDLSNNTSISYFSHHSPEQ 840
AAKSSTFLPTTCSSEMPLSSANVTTNIPVIPGGYLQTLLDASDLSNNTSISYFSHHSPEQ
Sbjct: 781 AAKSSTFLPTTCSSEMPLSSANVTTNIPVIPGGYLQTLLDASDLSNNTSISYFSHHSPEQ 840
Query: 841 NEGSLTQTEKSFVPLQPTQDCVLTSSSDSELQQSSHNFKMESSNYRNVWPNKATSGTQEF 900
NEGSLTQTEKSFVPLQPTQDCVLTSSSDSELQQSSHNFKMESSNYRNVWPNKATSGTQEF
Sbjct: 841 NEGSLTQTEKSFVPLQPTQDCVLTSSSDSELQQSSHNFKMESSNYRNVWPNKATSGTQEF 900
Query: 901 MAEVSREIAPTQSSEFGASQVVSMENNLTPTTYNPICLNSGGSNCNKVLYDSMQDTQLPS 960
MAEVSREIAPTQSSEFGASQVVSMENNLTPTTYNPICLNSGGSNCNKVLYDSMQDTQLPS
Sbjct: 901 MAEVSREIAPTQSSEFGASQVVSMENNLTPTTYNPICLNSGGSNCNKVLYDSMQDTQLPS 960
Query: 961 DDSYQLCHFNNGEICFPFQQGPVNMDDGRLFSFDSMAPLSVSSSNYCSLSLKSCEKDGDD 1020
DDSYQLCHFNNGEICFPFQQGPVNMDDGRLFSFDSMAPLSVSSSNYCSLSLKSCEKDGDD
Sbjct: 961 DDSYQLCHFNNGEICFPFQQGPVNMDDGRLFSFDSMAPLSVSSSNYCSLSLKSCEKDGDD 1020
Query: 1021 DITDDFLAHCSPKLVIQQSIDEIAPLKESTDLLDISNFTPDKFRHSSLSEMSPPDTPSLS 1080
DITDDFLAHCSPKLVIQQSIDEIAPLKESTDLLDISNFTPDKFRHSSLSEMSPPDTPSLS
Sbjct: 1021 DITDDFLAHCSPKLVIQQSIDEIAPLKESTDLLDISNFTPDKFRHSSLSEMSPPDTPSLS 1080
Query: 1081 PQITRCESMKTLGTLKGFQEGVPGPLDSVEKIKWDCSTLSRQVQMEDGFTLNNHQFQFHM 1140
PQITRCESMKTLGTLKGFQEGVPGPLDSVEKIKWDCSTLSRQVQMEDGFTLNNHQFQFHM
Sbjct: 1081 PQITRCESMKTLGTLKGFQEGVPGPLDSVEKIKWDCSTLSRQVQMEDGFTLNNHQFQFHM 1140
Query: 1141 FNDEDSVSLLQKNPCLSTFNDPSGQISTNNKVSKSRKKSSPSKSGAMNQSSSQKNTRKKS 1200
FNDEDSVSLLQKNPCLSTFNDPSGQISTNNKVSKSRKKSSPSKSGAMNQSSSQKNTRKKS
Sbjct: 1141 FNDEDSVSLLQKNPCLSTFNDPSGQISTNNKVSKSRKKSSPSKSGAMNQSSSQKNTRKKS 1200
Query: 1201 LKGNNKGIEKPPGKNSRQVPKSTKKGKYMAAINGEKMQIGIGRGGSQTNTISSTGKTLAE 1260
LKGNNKGIEKPPGKNSRQVPKSTKKGKYMAAINGEKMQIGIGRGGSQTNTISSTGKTLAE
Sbjct: 1201 LKGNNKGIEKPPGKNSRQVPKSTKKGKYMAAINGEKMQIGIGRGGSQTNTISSTGKTLAE 1260
Query: 1261 CIQHGGPMASMKMPSQKGLSGDWALGKESSPGWSDMSMGTNTNSLLDDDQREFQEPSYIL 1320
CIQHGGPMASMKMPSQKGLSGDWALGKESSPGWSDMSMGTNTNSLLDDDQREFQEPSYIL
Sbjct: 1261 CIQHGGPMASMKMPSQKGLSGDWALGKESSPGWSDMSMGTNTNSLLDDDQREFQEPSYIL 1320
Query: 1321 SNIASGMADVQRFMMASIEPLWEPMEHHGDPNIFYSPESNSLKLKTLKILAGTPQESKKK 1380
SNIASGMADVQRFMMASIEPLWEPMEHHGDPNIFYSPESNSLKLKTLKILAGTPQESKKK
Sbjct: 1321 SNIASGMADVQRFMMASIEPLWEPMEHHGDPNIFYSPESNSLKLKTLKILAGTPQESKKK 1380
Query: 1381 INSGSQGATKNHRSIKGVSKSNGKTAIGDPGRANMPGYNEDSRSTFFDKKYSNMSTLGNN 1440
INSGSQGATKNHRSIKGVSKSNGKTAIGDPGRANMPGYNEDSRSTFFDKKYSNMSTLGNN
Sbjct: 1381 INSGSQGATKNHRSIKGVSKSNGKTAIGDPGRANMPGYNEDSRSTFFDKKYSNMSTLGNN 1440
Query: 1441 GPTHKKLYRHKSSSKALRDEKCKGKHMEREQVHKDESGTASFEKLRDSDYNLLKAETTFW 1500
GPTHKKLYRHKSSSKALRDEKCKGKHMEREQVHKDESGTASFEKLRDSDYNLLKAETTFW
Sbjct: 1441 GPTHKKLYRHKSSSKALRDEKCKGKHMEREQVHKDESGTASFEKLRDSDYNLLKAETTFW 1500
Query: 1501 VLPVFEEETRIFQKDI 1516
VLPVFEEETRIFQKDI
Sbjct: 1501 VLPVFEEETRIFQKDI 1516
>gi|153792012 DNA polymerase zeta [Homo sapiens]
Length = 3130
Score = 129 bits (324), Expect = 2e-29
Identities = 145/469 (30%), Positives = 208/469 (44%), Gaps = 86/469 (18%)
Query: 299 DESTLGSDVCSLKIRYESFQDNVRDKTTLLMQEDAQFNFFPSV-FTTCPKRESKSGALKQ 357
DES L LKIRYE FQ++ +K +L Q+ A + FFPSV + C R K +
Sbjct: 765 DESGLNK----LKIRYEEFQEHKTEKPSL-SQQAAHYMFFPSVVLSNCLTRPQKLSPVT- 818
Query: 358 SSDFSQFKVPDVSIIWGEEDKNLDKKKGKEEGQEDKGVEKKDGKDNGEKPALNKPCSGTE 417
+K+ G + L K K G ++ + + + N PC+
Sbjct: 819 ------YKLQP-----GNKPSRLKLNKRKLAGHQETSTKSSETGSTKDNFIQNNPCNS-- 865
Query: 418 VEQLKNP-KQGHLANSLE--TSGSFSDDS---SFIEISYDAMGEIKDCSRYMARDTNSGS 471
NP K LA+ L T G+F + + FI+ + G+
Sbjct: 866 -----NPEKDNALASDLTKTTRGAFENKTPTDGFIDCHF-----------------GDGT 903
Query: 472 SSSQQNYGL-------RAKRKVRYSEDYLYDVDSLEGEKVNERKEWLPVGSK--EEDDDE 522
++Q++GL RAKRKV Y + DS + K LP + E D
Sbjct: 904 LETEQSFGLYGNKYTLRAKRKVNYETE-----DSESSFVTHNSKISLPHPMEIGESLDGT 958
Query: 523 WCPKKRRKVTRKEPPVIIKYIIINRFKGEKNMLVKLGKVDASETTVNLSENQLNKYAKLA 582
+KRRK+++K PPVIIKYIIINRF+G KNMLVKLGK+D+ E V L+E ++ Y KLA
Sbjct: 959 LKSRKRRKMSKKLPPVIIKYIIINRFRGRKNMLVKLGKIDSKEKQVILTEEKMELYKKLA 1018
Query: 583 PLKGFWQKKKKQRNTNTDSIKTPFSQKQSFEPGSFEVSFLPPARKR--KSKLGNRHRIQR 640
PLK FW K T P + K+S S S A+K+ K + N I+R
Sbjct: 1019 PLKDFWPKVPDSPATKYPIY--PLTPKKSHRRKSKHKS----AKKKTGKQQRTNNENIKR 1072
Query: 641 IPSIEISASSKQISLCNDQRHASNHKEDGGLKGTLKSAPLGAPSCANGSHLNDI------ 694
S S +S + +A ED L + + LG S + S +N
Sbjct: 1073 TLSFRKKRSHAILSPPSPSYNAET--EDCDLNYSDVMSKLGFLSERSTSPINSSPPRCWS 1130
Query: 695 -TGPDSVKVKAQDTE----FKGP---ERKVLNKIKFKSEARLKSKKVKA 735
T P + ++ A + FKGP ++ V ++I S AR + KK KA
Sbjct: 1131 PTDPRAEEIMAAAEKEAMLFKGPNVYKKTVNSRIGKTSRARAQIKKSKA 1179
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 47.8 bits (112), Expect = 8e-05
Identities = 98/457 (21%), Positives = 182/457 (39%), Gaps = 48/457 (10%)
Query: 355 LKQSSDFSQFKVPDVSIIWGEEDKNLDKKKGKEEGQEDKGVEKKDGKDNGEKPALNKPCS 414
++Q S + K D + ++ ++KK K+E E K K +D +K K
Sbjct: 307 VQQESSEQKNKSTDKGEKKPDSNEKGERKKEKKEKTEKKFDHSKKSEDT-QKVKDEKQAK 365
Query: 415 GTEVEQLKNPKQGHLANSLETSGSFSDDSSFIEISYDAMGEIKDCSRYMA------RDTN 468
EVE LK P + + +N +T +D S I+ D + +I S + + DT
Sbjct: 366 EKEVESLKLPSEKN-SNKAKTVEGTKEDFSLIDSDVDGLTDITVSSVHTSDLSSFEEDTE 424
Query: 469 SG--SSSSQQNYGLRA--KRKVRYSEDYLYDVDSLEGEKVNER-----KEWLPVGSKEED 519
+S S + + + + K + ++ DS EG+ + R K +L +
Sbjct: 425 EEVVTSDSMEEGEITSDDEEKNKQNKTKTQTSDSSEGKTKSVRHAYVHKPYLYSKYYSDS 484
Query: 520 DDEWCPKKRRKVTRKEPPVIIKYIIINRFKGEKNMLVKLGKVDASET------TVNLSEN 573
DDE ++RR+ KE + INR K E+ K K +S+T +V+L E+
Sbjct: 485 DDELTVEQRRQSIAKEKEERLLRRQINREKLEEKRKQKAEKTKSSKTKGQGRSSVDLEES 544
Query: 574 QLNKY-AKLAPLKGFWQKKK---------KQRNTNTDSIKTPFSQKQSFEPGSFEVSFLP 623
K A +K +++K K+R ++ +++ +KQ +E S E +
Sbjct: 545 STKSLEPKAARIKEVLKERKVLEKKVALSKKRKKDSRNVEENSKKKQQYEEDSKE-TLKT 603
Query: 624 PARKRKSKLGNRHRIQRIPSIEISASSKQISLCNDQRHASNHKEDGGLKGTLKSAPLGAP 683
K K+ + ++ + + S SK ++ H + ++ P
Sbjct: 604 SEHCEKEKISSSKELKHVHA--KSEPSKPARRLSESLHVVDENKNESKLEREHKRRTSTP 661
Query: 684 SCANGSHLNDITGPDSVKVKAQDTEFKGPERKVLNKIKFKSEARLKSKKVKAAGQESKPI 743
G + + T VK + + +E E + K ++ LK++K P
Sbjct: 662 VIMEG--VQEETDTRDVKRQVERSEICTEEPQ-------KQKSTLKNEKHLKKDDSETPH 712
Query: 744 VQMSPLLENQSSKANLKNEVIPGTSNSSRLSEFHEAK 780
++ E +SSK + E P + +LS H+ K
Sbjct: 713 LKSLLKKEVKSSKEKPEREKTP---SEDKLSVKHKYK 746
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 42.7 bits (99), Expect = 0.003
Identities = 160/855 (18%), Positives = 270/855 (31%), Gaps = 82/855 (9%)
Query: 374 GEEDKNLDKKKGKEEGQEDKGVEKKD-------------GKDNGEKPALNKPCSGTEVEQ 420
G+ N D+ K G + KG E D G N +K SG
Sbjct: 489 GDASYNSDESKDNGNGSDSKGAEDDDSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSD 548
Query: 421 LKNPKQGHLANSLETSGSFSDDSSFIEISYDAMGEIKDCSRYMARDTNSGSSSSQQNYGL 480
+ +NS ++S S DSS S D+ D S D++ SS N
Sbjct: 549 SSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSS-----DSSDSDSSDSSN--- 600
Query: 481 RAKRKVRYSEDYLYDVDSLEGEKVNERKEWLPVGSKEEDDDEWCPKKRRKVTRKEPPVII 540
S D DS + ++ + SK E D K
Sbjct: 601 --------SSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDS---------- 642
Query: 541 KYIIINRFKGEKNMLVKLGKVDASETTVNLSENQLNKYAKLAPLKGFWQKKKKQRNTNTD 600
+ N D+S+ S N N + ++D
Sbjct: 643 ---------SDSNSSDSSDNSDSSD-----SSNSSNSSDSSDSSDSSDSSSSSDSSNSSD 688
Query: 601 SIKTPFSQKQSFEPGSFEVSFLPPARKRKSKLGNRHRIQRIPSIEISASSKQISLCNDQR 660
S + S S S + S + S N S + S SS S +D
Sbjct: 689 SSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNS-SDSSDSS 747
Query: 661 HASNHKEDGGLKGTLKSAPLGAPS-------CANGSHLNDITGPDSVKVKAQDTEFKGPE 713
+SN + + S+ S +N S ND + + ++
Sbjct: 748 DSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSS 807
Query: 714 RKVLNKIKFKSEARLKSKKVKAAGQESKPIVQMSPLLENQSSKANLKNEVIPGTSNSSRL 773
+ S++ S ++ S + S ++ + +SNSS
Sbjct: 808 DSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDS 867
Query: 774 SEFHEAKAAKSSTFLPTTCSSEMPLSS-ANVTTNIPVIPGGYLQTLLDASDLSNNTSISY 832
S+ + ++ SS ++ S+E SS ++ ++N D+SD SN++ S
Sbjct: 868 SD--SSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSE 925
Query: 833 FSHHSPEQNEGSLTQTEKSFVPLQPTQDCVLTSSSDSELQQSSHNFKMESSNYRNVWPNK 892
S+ S N + + S + ++SSDS S + S+ + N
Sbjct: 926 SSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSS---NS 982
Query: 893 ATSGTQEFMAEVSREIAPTQSSEFGASQVVSMENNLTPTTYNPICLNSGGSNCNKVLYDS 952
+ S ++ S + SS+ S S +N + ++ + NS S+ + DS
Sbjct: 983 SDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDS 1042
Query: 953 MQDTQLPSDDSYQLCHFNNGEICFPFQQGPVNMDDGRLFSFDSMAPLSVSSSNYCSLSLK 1012
+ S DS + ++ + D S DS S S+ S S
Sbjct: 1043 SDSSD--SSDSSDSSNSSDSSDSSDSSDSSDSSD-----SSDSSDSSESSDSSDSSNSSD 1095
Query: 1013 SCEKDGDDDITDDFLAHCSPKLVIQQSIDEIAPLKESTDLLDISNFTPDKFRHSSLSEMS 1072
S + D +D + S + + + +S+D D SN + S
Sbjct: 1096 SSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSD 1155
Query: 1073 PPDTPSLSPQITRCESMKTLGTLKGFQEGVPGPLDSVEKIKWDCSTLSRQVQMEDGFTLN 1132
D+ S +S + + DS + D S S D +
Sbjct: 1156 SSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSS--DSSDSS--DSSDSSDSSDSSDSSDSS 1211
Query: 1133 NHQFQFHMFNDEDSVSLLQKNPCLSTFNDPSGQISTNNKVSKSRKKSSPSKSGAMNQSSS 1192
+ + DS N + + S+N+ S SS S S + ++S S
Sbjct: 1212 DSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESDS 1271
Query: 1193 QKNTRKKSLKGNNKG 1207
Q KS GNN G
Sbjct: 1272 QS----KSGNGNNNG 1282
Score = 33.9 bits (76), Expect = 1.2
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 25/130 (19%)
Query: 1143 DEDSVSLLQKNPCLSTFNDPSGQISTNN-----KVSKSRKKSS--PSKSGAMNQSSSQKN 1195
++D S + +N + DP G+ +N K SKS + S+ P +G+ +QK
Sbjct: 288 EDDHDSSIGQNSDSKEYYDPEGKEDPHNEVDGDKTSKSEENSAGIPEDNGSQRIEDTQKL 347
Query: 1196 TRKKSL----------------KGNNKGIE-KPPGKNSRQVPKSTKKGKYMAAINGEKMQ 1238
++S K +KGIE K P +R + K KG G+
Sbjct: 348 NHRESKRVENRITKESETHAVGKSQDKGIEIKGPSSGNRNITKEVGKGNEGKEDKGQHGM 407
Query: 1239 IGIGRGGSQT 1248
I +G+G +T
Sbjct: 408 I-LGKGNVKT 416
>gi|28559039 mediator complex subunit 1 [Homo sapiens]
Length = 1581
Score = 42.7 bits (99), Expect = 0.003
Identities = 86/344 (25%), Positives = 132/344 (38%), Gaps = 50/344 (14%)
Query: 1162 PSGQISTNNKVSKSRKKS----SPSKSGAMNQSSSQKNTRKKSLKGNNKGIEKPPGKNSR 1217
PS + +K K +K SPS S + + +T G+ + PPG +
Sbjct: 999 PSNDGKSKDKPPKRKKADTEGKSPSHSSSNRPFTPPTSTGGSKSPGSAGRSQTPPGVATP 1058
Query: 1218 QVPKSTKKGKYMAAINGEKMQIGIGRGGSQTN-TISSTGKTLAECIQHGGPMASMKMPSQ 1276
+PK T I K + +G+ S + T S + + H +S S
Sbjct: 1059 PIPKIT--------IQIPKGTVMVGKPSSHSQYTSSGSVSSSGSKSHHSHSSSSSSSAST 1110
Query: 1277 KG-LSGDWALGKESSPGWSDM--SMGTNTNSLLDDDQREFQEPS---YILSNIASGMADV 1330
G + + G SS S M S G++ +S + + +P ++SG +
Sbjct: 1111 SGKMKSSKSEGSSSSKLSSSMYSSQGSSGSSQSKNSSQSGGKPGSSPITKHGLSSGSSST 1170
Query: 1331 QRFMMASIEPLWEPMEHHGDPNIFYS---PESNSLKLKT-LKILAGTPQESKKK--INSG 1384
+ L P PNI S P S KL + +K + GTP SK K I+SG
Sbjct: 1171 KMKPQGKPSSLMNP--SLSKPNISPSHSRPPGGSDKLASPMKPVPGTPPSSKAKSPISSG 1228
Query: 1385 SQGA-TKNHRSIKGVSKSNGKTAIGDPGRANMPGYNE-DSRSTFFDKKYSNMSTLGNNGP 1442
S G+ S G+ S+G + G + P N + S+ F S+MS+ N
Sbjct: 1229 SGGSHMSGTSSSSGMKSSSGLGSSGSLSQKTPPSSNSCTASSSSFSSSGSSMSSSQN--- 1285
Query: 1443 THKKLYRHKSSSKALRDEKCKGKHMEREQVHKDESGTASFEKLR 1486
+H SS KGK R +K S TA +KL+
Sbjct: 1286 ------QHGSS---------KGKSPSR---NKKPSLTAVIDKLK 1311
>gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens]
Length = 237
Score = 38.9 bits (89), Expect = 0.038
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 7/149 (4%)
Query: 383 KKGKEEGQEDKGVEKKDGKDNGEKPALNKPCSGTEVEQLKNPKQGHLANSLETSGSFSDD 442
+ ++ Q K +KK G+ + + + S + + ++ KQG + S +
Sbjct: 75 ESSSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSE 134
Query: 443 SSFIEISYDAMGEIKDCSRYMARDTNSGSSSSQQNYGLRAKRKVRYSEDYLYDVDSL-EG 501
SS E D+ +K + + G+ + GL KRK+ YSED +SL E
Sbjct: 135 SSMSETESDSKDSLK-----KKKKSKDGTEKEKDIKGLSKKRKM-YSEDKPLSSESLSES 188
Query: 502 EKVNERKEWLPVGSKEEDDDEWCPKKRRK 530
E + E + S+E + KK++K
Sbjct: 189 EYIEEVRAKKKKSSEEREKATEKTKKKKK 217
Score = 36.6 bits (83), Expect = 0.19
Identities = 33/159 (20%), Positives = 61/159 (38%), Gaps = 12/159 (7%)
Query: 589 QKKKKQRNTNTDSIKTPFSQKQSFEPGSFEVSFLPPARKRKSKLGNRHRIQRIPSIEISA 648
+KKK+++ + S + S S E ++RK K H+ E +
Sbjct: 83 RKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESSMSETES 142
Query: 649 SSKQISLCNDQRHASNHKEDGGLKGTLK-------SAPLGAPSCANGSHLNDITGPDSVK 701
SK SL ++ +++ +KG K PL + S + ++ ++ K
Sbjct: 143 DSKD-SLKKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLSSESLSESEYIEEV----RAK 197
Query: 702 VKAQDTEFKGPERKVLNKIKFKSEARLKSKKVKAAGQES 740
K E + K K K K ++ K KK ++ +S
Sbjct: 198 KKKSSEEREKATEKTKKKKKHKKHSKKKKKKAASSSPDS 236
>gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens]
Length = 247
Score = 38.9 bits (89), Expect = 0.038
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 7/149 (4%)
Query: 383 KKGKEEGQEDKGVEKKDGKDNGEKPALNKPCSGTEVEQLKNPKQGHLANSLETSGSFSDD 442
+ ++ Q K +KK G+ + + + S + + ++ KQG + S +
Sbjct: 85 ESSSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSE 144
Query: 443 SSFIEISYDAMGEIKDCSRYMARDTNSGSSSSQQNYGLRAKRKVRYSEDYLYDVDSL-EG 501
SS E D+ +K + + G+ + GL KRK+ YSED +SL E
Sbjct: 145 SSMSETESDSKDSLK-----KKKKSKDGTEKEKDIKGLSKKRKM-YSEDKPLSSESLSES 198
Query: 502 EKVNERKEWLPVGSKEEDDDEWCPKKRRK 530
E + E + S+E + KK++K
Sbjct: 199 EYIEEVRAKKKKSSEEREKATEKTKKKKK 227
Score = 36.6 bits (83), Expect = 0.19
Identities = 33/159 (20%), Positives = 61/159 (38%), Gaps = 12/159 (7%)
Query: 589 QKKKKQRNTNTDSIKTPFSQKQSFEPGSFEVSFLPPARKRKSKLGNRHRIQRIPSIEISA 648
+KKK+++ + S + S S E ++RK K H+ E +
Sbjct: 93 RKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESSMSETES 152
Query: 649 SSKQISLCNDQRHASNHKEDGGLKGTLK-------SAPLGAPSCANGSHLNDITGPDSVK 701
SK SL ++ +++ +KG K PL + S + ++ ++ K
Sbjct: 153 DSKD-SLKKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLSSESLSESEYIEEV----RAK 207
Query: 702 VKAQDTEFKGPERKVLNKIKFKSEARLKSKKVKAAGQES 740
K E + K K K K ++ K KK ++ +S
Sbjct: 208 KKKSSEEREKATEKTKKKKKHKKHSKKKKKKAASSSPDS 246
>gi|195976782 Paf1/RNA polymerase II complex component [Homo
sapiens]
Length = 710
Score = 38.1 bits (87), Expect = 0.065
Identities = 62/284 (21%), Positives = 115/284 (40%), Gaps = 23/284 (8%)
Query: 349 ESKSGALKQSSDFSQFKVPDVSIIWGEEDKNLDKKKGKEEGQEDKGVEKKDGKDNGEKPA 408
E K + Q + S + D W N +KKKGK E KG KK +
Sbjct: 80 EEKEPPVSQPAASSDSETSDSDDEW-TFGSNKNKKKGKARKIEKKGTMKKQANKTASSGS 138
Query: 409 LNKPCSGTEVEQLKNPKQGHLANS---LETSGSFSDDSSFIEISYDAMGE--IKDCSRYM 463
+K S + P++G +++S +S S SD SS E +D GE + D
Sbjct: 139 SDKDSSA----ESSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFHDGYGEDLMGDEEDRA 194
Query: 464 ARDTNSGSSSSQQNYGLRAKRKVRYSEDYLYDVDSLEGEKVNERKEWLPVGSKEEDDDEW 523
+ + Q+ + KR+V + L+ K E+KE K++ ++E
Sbjct: 195 RLEQMTEKEREQELFNRIEKREVLKRRFEI--KKKLKTAKKKEKKE-----KKKKQEEE- 246
Query: 524 CPKKRRKVTRKEPPVIIKYIIINRFKGEKNMLVKLGKVDASETTVNLSENQLNK-YAKLA 582
++++K+T+ + + + R K ++ + K ++ + +N+ + AK
Sbjct: 247 --QEKKKLTQIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAEREKRKNRTAELLAKKQ 304
Query: 583 PLK--GFWQKKKKQRNTNTDSIKTPFSQKQSFEPGSFEVSFLPP 624
PLK + +++ + S K+ S + S E +PP
Sbjct: 305 PLKTSEVYSDDEEEEEDDKSSEKSDRSSRTSSSDEEEEKEEIPP 348
>gi|187608516 centaurin, beta 2 [Homo sapiens]
Length = 778
Score = 38.1 bits (87), Expect = 0.065
Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 11/210 (5%)
Query: 1207 GIEKP-PGKNSRQVPKSTKKGKYMAAINGEKMQIGIGRGGSQTNTISSTGKTLAECIQHG 1265
GI+KP PG+ RQ ++ + KY+ +K I + Q +S + + I
Sbjct: 487 GIKKPQPGQ--RQEKEAYIRAKYVERKFVDKYSISLSPPEQQKKFVSKSSEEKRLSISKF 544
Query: 1266 GPMASMKMPSQKGL-SGDWALGKESSPGWSDMSMGTNTNSLLDDDQREFQEPSYIL--SN 1322
GP ++ +Q + S D + + S G + + NSL + + E Q+ S L +
Sbjct: 545 GPGDQVRASAQSSVRSNDSGIQQSSDDGRESLPSTVSANSLYEPEG-ERQDSSMFLDSKH 603
Query: 1323 IASGMADVQRFMMASIEPLWEPMEHHGDPNIFYSPESNSLKLKTLKILAGTPQESKKKIN 1382
+ G+ + ++ + E + H D N S E+ + L +L G+ + +
Sbjct: 604 LNPGLQLYRASYEKNLPKMAEALAHGADVNWANSEENKATPL-IQAVLGGSLVTCEFLLQ 662
Query: 1383 SGSQGATKNHRSIKGVSKSNGKTAIGDPGR 1412
+ GA N R ++G + T +G G+
Sbjct: 663 N---GANVNQRDVQGRGPLHHATVLGHTGQ 689
>gi|239756261 PREDICTED: similar to hect domain and RLD 2 [Homo
sapiens]
Length = 1102
Score = 37.4 bits (85), Expect = 0.11
Identities = 76/355 (21%), Positives = 124/355 (34%), Gaps = 52/355 (14%)
Query: 583 PLKGFWQKK--------KKQRNTNTDSIKTPFSQKQSFEPGSFEVSFLP-PARKRKSKLG 633
PLK +WQK K+ R TN SI + PG E LP +RKS+
Sbjct: 43 PLKEYWQKNSPRVPEGAKRNRKTN-GSIPETATSGGCQSPGDAEKKMLPVDGEERKSEGS 101
Query: 634 NRHRIQRIPSIEISASSKQISLCNDQRHASNHKEDGGLKGTLKSAPLGAPSCANGSHLND 693
+ + P SA+ K + + R S+ + L LGAP A +H
Sbjct: 102 DTEGDRTSPCALSSATLKDLEVGGSGRRCSDPAGQPSI--LLTQWGLGAPLPAETAHTXP 159
Query: 694 -------ITGPDSVKVKAQDTEFKGPERK---VLNKIKFKSEARLKSKKVKAAGQESKPI 743
PDS + + P ++ VLN +S K+ K +
Sbjct: 160 SPDDRFLYLSPDSSSTSSSLHAPQXPCQEPAVVLNP---------RSVKISQLKNTIKSL 210
Query: 744 VQMSPLLENQSSKANLKNEVIPGTSNSSRLSEFHEAKAAK-----------------SST 786
Q +E+Q + + + ++P S + + +E + AK ++
Sbjct: 211 KQQKKQVEHQLEEVTVPDNLVPWVGLSWGIGKANEKQKAKRELEVQIQRLNIQKKXLNTD 270
Query: 787 FLPTTCSSEMPLSSANVT--TNIPVIPGGYLQTLLDASDLSNNTSISYFSHHSPEQNEGS 844
T CS S ++ + G L+ L A + IS FS S E
Sbjct: 271 LYDTKCSLRYFEESKDLAGCLQYSLQCIGELERALSAVTTTEEKEISGFSSRSRAHTEWE 330
Query: 845 LTQTEKSFVPLQPTQDCVLTSSSDSELQQSSHNFKMESSNYRNVWPNKATSGTQE 899
L Q+ + L+ + S +LQ+ N+ + R W + +QE
Sbjct: 331 LEQSLQEKARLKAXLTRLKESFQQVQLQRD--NYAQQIKGERARWQQRMRKMSQE 383
>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo
sapiens]
Length = 6929
Score = 37.0 bits (84), Expect = 0.15
Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 5/150 (3%)
Query: 750 LENQSSKANLKNEVIPGTSNSSRLSEFHEAKAAKSSTFLPTTCSSEMPLSSANVTTNIP- 808
LE SK K P +++R+ + +++++S L + E+P S+ P
Sbjct: 619 LEEAISKPMQKLVSSPEMESNNRMKIQEDLQSSENS-HLQLSNGEELPTSTPKTQRCFPR 677
Query: 809 ---VIPGGYLQTLLDASDLSNNTSISYFSHHSPEQNEGSLTQTEKSFVPLQPTQDCVLTS 865
+L+ +L+ S++ S+ H S E+ E Q V L+ ++ +L
Sbjct: 678 ENTQKQKDFLELVLELSNVGLLISLGSKMHKSSEELEAIKIQVNTESVNLKESKPLILNV 737
Query: 866 SSDSELQQSSHNFKMESSNYRNVWPNKATS 895
+ DS+L++S SN N+ +K TS
Sbjct: 738 TEDSDLRESEELECNTGSNITNMHQDKETS 767
>gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo
sapiens]
Length = 6929
Score = 37.0 bits (84), Expect = 0.15
Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 5/150 (3%)
Query: 750 LENQSSKANLKNEVIPGTSNSSRLSEFHEAKAAKSSTFLPTTCSSEMPLSSANVTTNIP- 808
LE SK K P +++R+ + +++++S L + E+P S+ P
Sbjct: 619 LEEAISKPMQKLVSSPEMESNNRMKIQEDLQSSENS-HLQLSNGEELPTSTPKTQRCFPR 677
Query: 809 ---VIPGGYLQTLLDASDLSNNTSISYFSHHSPEQNEGSLTQTEKSFVPLQPTQDCVLTS 865
+L+ +L+ S++ S+ H S E+ E Q V L+ ++ +L
Sbjct: 678 ENTQKQKDFLELVLELSNVGLLISLGSKMHKSSEELEAIKIQVNTESVNLKESKPLILNV 737
Query: 866 SSDSELQQSSHNFKMESSNYRNVWPNKATS 895
+ DS+L++S SN N+ +K TS
Sbjct: 738 TEDSDLRESEELECNTGSNITNMHQDKETS 767
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 37.0 bits (84), Expect = 0.15
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 27/175 (15%)
Query: 349 ESKSGALKQSSDFSQFKVPDVSIIWGEE---DKNLDKKKGKEEGQEDKGVEKKDGKDNGE 405
ESK + D K + + +E D + + K ++G++D+ KKD K + +
Sbjct: 414 ESKESQKDEKKDKKDSKTDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDK 473
Query: 406 KPALNKPCSGTEVE---QLKNPKQGHLANSLETSGSFSDDSSFIEISYDAMGEIKDCSRY 462
K K TE+E +LK K+ +S E GS D I DA + +
Sbjct: 474 KKDAKKNAESTEMESDLELKKDKK----HSKEKKGSKKD------IKKDARKDTESTDAE 523
Query: 463 MARDTNSGSSSSQQNYGLRAKRKVRYSEDYLY------DVDSLEGEKVNERKEWL 511
+ +G +S + G + SE+ LY +D +G N + E L
Sbjct: 524 FDESSKTGFKTSTKIKGSDTE-----SEESLYKPGAKKKIDESDGTSANSKMEGL 573
Score = 34.7 bits (78), Expect = 0.72
Identities = 71/305 (23%), Positives = 119/305 (39%), Gaps = 44/305 (14%)
Query: 342 FTTCPKRESKSGALKQSSDFSQFKVPDVSIIWGEEDKNL---DKKKGKEEGQEDKGVEKK 398
+T K+++K A K+SSD D + KN+ DKKK ++ E E
Sbjct: 280 YTKYTKKDTKKNA-KKSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESG 338
Query: 399 DGKDNGEKPALNKPCSGTEVEQLKNPKQGHLANSLETSGSFSDDSSFIEISYDAMGEIKD 458
D KD E + K K+ L+ D + E + G+ KD
Sbjct: 339 DSKD--------------ERKDTKKDKK-----KLKKDDKKKDTKKYPESTDTESGDAKD 379
Query: 459 CSRYMARDTNSGSSSSQQNYGLRAKRKVRYSEDYLYDVDSLEGEKVNERKEWLPVGSKEE 518
D+ + +S+ + + +K+ +S D +++S E +K +E+K+ SK +
Sbjct: 380 A----RNDSRNLKKASKNDDKKKDAKKITFSTDSESELESKESQK-DEKKD--KKDSKTD 432
Query: 519 DDDEWCPKKRRKVTRKEPPVIIKYIIINRFKGEKNMLVKLGKVDA---SETTVNLSENQL 575
+ + EP K + KG+K+ K DA +E+T S+ +L
Sbjct: 433 NKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMESDLEL 492
Query: 576 NKYAKLA-PLKGFWQKKKKQRNTNTDSIKTPF--SQKQSFEPGS--------FEVSFLPP 624
K K + KG + KK +T+S F S K F+ + E S P
Sbjct: 493 KKDKKHSKEKKGSKKDIKKDARKDTESTDAEFDESSKTGFKTSTKIKGSDTESEESLYKP 552
Query: 625 ARKRK 629
K+K
Sbjct: 553 GAKKK 557
>gi|4557509 cylicin 2 [Homo sapiens]
Length = 348
Score = 36.6 bits (83), Expect = 0.19
Identities = 53/213 (24%), Positives = 82/213 (38%), Gaps = 21/213 (9%)
Query: 381 DKKKGK--EEGQEDKGVEKKDGKDNGEKPALNKPCSGTEVEQLKNPKQGHLANSLETSGS 438
D KKGK E+G+E+K KKD K G+K A S TE E K + N + S
Sbjct: 140 DSKKGKDIEKGKEEKLDAKKDSK-KGKKDAEKGKDSATESEDEKGGAKKD--NKKDKKDS 196
Query: 439 FSDDSSFIEISYDAMGEIKDCSRYMARDTNSGSSSSQQNYGLRAKRKV-----------R 487
S E + G KD S+ +D+ G S+ + ++A K
Sbjct: 197 NKGKDSATESEGEKGGTEKD-SKKGKKDSKKGKDSAIELQAVKADEKKDEDGKKDANKGD 255
Query: 488 YSEDYLYDVDSLEGEKVNERKEWLPVGSKEEDDDEWCPKKRRKVTRKEPPVIIKYIIINR 547
S+D D ++ K +++K S + D + K+ +K K+ + K
Sbjct: 256 ESKDAKKDAKEIKKGKKDKKKP----SSTDSDSKDDVKKESKKDATKDAKKVAKKDTEKE 311
Query: 548 FKGEKNMLVKLGKVDASETTVNLSENQLNKYAK 580
K K K DA + ++ K AK
Sbjct: 312 SADSKKDAKKNAKKDAKKDAKKNAKKDEKKDAK 344
>gi|109638751 ubiquitin specific protease 6 [Homo sapiens]
Length = 1406
Score = 36.6 bits (83), Expect = 0.19
Identities = 47/174 (27%), Positives = 69/174 (39%), Gaps = 34/174 (19%)
Query: 1149 LLQKNPCLSTFNDPSGQISTNNKVSKSRKKSSPSKSGAMNQSS--SQKNTRKKSLKGNNK 1206
LL K+P +S N S SS KSG SS S N+ ++L G +K
Sbjct: 1155 LLSKSP---------SSLSANISSSPKGSPSSSRKSGTSCPSSKNSSPNSSPRTL-GRSK 1204
Query: 1207 GIEKPPGKNSRQVPKSTKKGKYMAAING--------EKMQIGIGRGGSQTNTISSTGKTL 1258
G + P S+ P S+KK + NG + + G RGGSQ ++ +
Sbjct: 1205 GRLRLPQIGSKNKPSSSKKNLDASKENGAGQICELADALSRGHMRGGSQPELVTPQDHEV 1264
Query: 1259 AECIQHGGPMASMKMPSQKGLSGDWALGKESSPGWSDMSMGTNTNSLLDDDQRE 1312
A + +G L A G G+S+ +G ++ DDQRE
Sbjct: 1265 A--LANG------------FLYEHEACGNGCGDGYSNGQLGNHSEEDSTDDQRE 1304
>gi|239753231 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]
Length = 948
Score = 36.2 bits (82), Expect = 0.25
Identities = 82/406 (20%), Positives = 157/406 (38%), Gaps = 77/406 (18%)
Query: 348 RESKSGALKQSSDFSQFKVPDVSIIWGEEDKNLDKKKGKEEGQEDKGVEKKDGKDNGEKP 407
RE+K G ++S S K P + E+D L+ +GK+ G++ K V + +KP
Sbjct: 559 RENKDG--EKSRTVSSEKPPGLKASSDEKDSVLNIARGKKYGEKTKRVSSR------KKP 610
Query: 408 ALNKPCSGTEVEQLKN----PKQGHLANSLETSGSFSDDSSFIEISYDAMGEIKDCSRYM 463
+L + E + N K G ++ + S ++ + D + +R
Sbjct: 611 SLE--ATSDEKDSFSNITREKKDGEISRKVS-----SQKPPALKGTSDEEDSVLGIAREN 663
Query: 464 ARDTNSGSSSSQQNYGLRAKRKVRYSEDYLYDVDSLEGEKVNERKEWLPVGSKEEDDDEW 523
S + SS++ GL+A +E+ L + ++D +
Sbjct: 664 KDGEKSRTVSSEKPPGLKATS--------------------DEKDSVLNIARGKKDGE-- 701
Query: 524 CPKKRRKVTRKEPPVI---------IKYIIINRFKGEKNMLVKLGKVDASETTVNLSENQ 574
K R V+ ++PP + + I GEK+ V K + T ++
Sbjct: 702 ---KTRTVSSQKPPTLKATSDEEDSVLSIARENKDGEKSRTVSSEKPSGLKATSAEKDSV 758
Query: 575 LNKYAKLAPLKGFWQKKKKQRNTNTDSIKTPFSQKQSFEPGSFEVSFLPPARKRKSKLGN 634
LN +A K + +K K+ + ++K +K S L AR++K G
Sbjct: 759 LN----IARGKKYGEKTKRVSSRKKPALKATSDEKD---------SVLYIAREKKD--GE 803
Query: 635 RHRI---QRIPSIEISASSKQISLCNDQRHASNHKEDGGLKGTLKSAPLGAPSCANGSHL 691
+ R Q+ P+++ + K+ S+ N + K+D + GT+ S A +
Sbjct: 804 KSRTVSSQKQPALK-AICDKEDSVPN----MATEKKDEQISGTVSSQKQPALKATSDKKD 858
Query: 692 NDITGPDSVKVKAQDTEFKGPERKVLNKIKFKSEARLKSKKVKAAG 737
+ P +K Q + P+++ K+ FK + L + + G
Sbjct: 859 SVSNIPTEIK-DGQQSGTVSPQKQSAQKVIFKKKVSLLNIATRITG 903
>gi|157738621 kinesin family member 13A isoform a [Homo sapiens]
Length = 1805
Score = 36.2 bits (82), Expect = 0.25
Identities = 40/176 (22%), Positives = 73/176 (41%), Gaps = 10/176 (5%)
Query: 918 ASQVVSMENNLTPTTYNPICLNSGGSNCNK--VLYDSMQDTQLPSDDSYQLCHFNNGEIC 975
A ++S E+ P +NP C+ GSN + V ++S ++ ++ S++ N ++
Sbjct: 1485 ARPLLSQESMPPPQAHNPGCIVPSGSNGSSMPVEHNSKREKKIDSEEEENELEAINRKLI 1544
Query: 976 FPFQQGPVNMDDGRLF--SFDSMAPLS--VSSSNYCSLSLKSCEKDGDDDITDDFLAHCS 1031
PV D ++ S ++ S V SN L + IT + +H +
Sbjct: 1545 SSQPYVPVEFADFSVYNASLENREWFSSKVDLSNSRVLEKEVSRSPTTSSITSGYFSHSA 1604
Query: 1032 PKLVIQQSIDEIAPLKESTDLLDISNFTPDKFRHSSLSEMSPPDTPSLSPQITRCE 1087
+ D + P +S+D L I D HS+ S + PS + ++T E
Sbjct: 1605 SNATLS---DMVVPSSDSSDQLAIQTKDADSTEHSTPS-LVHDFRPSSNKELTEVE 1656
>gi|45935385 SAM and SH3 domain containing 1 [Homo sapiens]
Length = 1247
Score = 36.2 bits (82), Expect = 0.25
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 21/223 (9%)
Query: 1179 SSPSKSGAMNQSSSQKNTRKKSLKGNNKGIEKPPGKNSR--QVPKSTKKGKYMAAINGEK 1236
+SPS S + +K + S KG ++G+ KPP K P+ K K ++ +
Sbjct: 334 TSPSSSSLDTWGAGRKLVKTFS-KGESRGLIKPPKKMGTFFSYPEEEKAQKVSRSLTEGE 392
Query: 1237 MQIGIGRGGSQTNTISSTGKTLAECIQHGGPMASMKMPSQKGLSGDWALGKE--SSPGWS 1294
M+ G+G S T S G L H G S M G GD+ KE SP S
Sbjct: 393 MKKGLG-SLSHGRTCSFGGFDLTNRSLHVGSNNSDPM----GKEGDFVY-KEVIKSPTAS 446
Query: 1295 DMSMGTNTNSLLDDDQREFQEP-SYILSNIASGMADVQRFMMASIEPLWEPMEHHGDPNI 1353
+S+G S+ + ++ + S +S SG+ M S P EH P +
Sbjct: 447 RISLGKKVKSVKETMRKRMSKKYSSSVSEQDSGLDG----MPGSPPPSQPDPEHLDKPKL 502
Query: 1354 FYSPESNSLKLKTLKILAGTPQESKKKINSGSQGATKNHRSIK 1396
SL+ L+G S + + S + +T N S+K
Sbjct: 503 KAGGSVESLR----SSLSGQSSMSGQTV-STTDSSTSNRESVK 540
>gi|156104891 general transcription factor IIF, polypeptide 1, 74kDa
[Homo sapiens]
Length = 517
Score = 36.2 bits (82), Expect = 0.25
Identities = 40/173 (23%), Positives = 66/173 (38%), Gaps = 32/173 (18%)
Query: 375 EEDKNLDKKKGKEEGQEDKGVEKKD------------GKDNGEKPALNKPCSGTEVEQLK 422
+ED+ +K+G+ + E + + +D G++ G P K + + K
Sbjct: 188 DEDEEEKEKRGRRKASELRIHDLEDDLEMSSDASDASGEEGGRVPKAKKKAPLAKGGRKK 247
Query: 423 NPKQGHLANSLETSGSFSDDSSFIEISYDAMGEIKDCSRYMARDTNSGSSSSQQNYGLRA 482
K+G + E S DD F D M + GSSSSQ+ +
Sbjct: 248 KKKKGSDDEAFEDS----DDGDFEGQEVDYMSD--------------GSSSSQEEP--ES 287
Query: 483 KRKVRYSEDYLYDVDSLEGEKVNERKEWLPVGSKEEDDDEWCPKKRRKVTRKE 535
K K E+ VD +E P KEE++++ P + K RK+
Sbjct: 288 KAKAPQQEEGPKGVDEQSDSSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKD 340
>gi|7661950 SH2 domain binding protein 1 [Homo sapiens]
Length = 1173
Score = 36.2 bits (82), Expect = 0.25
Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 60/260 (23%)
Query: 311 KIRYESFQDNVRDKTTL--LMQEDAQF-----NFFPSVFTTCPKRESKSGA-----LKQS 358
K+ E + +R+K L+++ AQ+ N T +E K G K+
Sbjct: 855 KLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKEKKRGGGGGRRSKKG 914
Query: 359 SDFSQFKVPDVSIIWGEEDKNLDKKK-------GKEEGQEDKGVEKK------------- 398
+F +F D ++D + KKK ++EG++++G E+K
Sbjct: 915 GEFDEFVNDDT-----DDDLPISKKKKRRKGSGSEQEGEDEEGGERKKKKRRRHPKGEEG 969
Query: 399 ---DGKDNGEKPALNKPCSGTEVEQLKNPKQGHLANSL------ETSGSFSDDSSFIEIS 449
D +NG KP +P + E+ K PK L S+ + S SDDSS +
Sbjct: 970 SDDDETENGPKPKKRRP---PKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDSSDED-- 1024
Query: 450 YDAMGEIKDCSRYMARDTNSGSSSSQQNYGLRAKRKVRYSEDYLYDVDSLEGEKVNERKE 509
++K R++NS S S + ++K SE + + G + +
Sbjct: 1025 -----KLKIADEGHPRNSNSNSDSDED----EQRKKCASSESDSDENQNKSGSEAGSPRR 1075
Query: 510 WLPVGSKEEDDDEWCPKKRR 529
S ++ D + +KRR
Sbjct: 1076 PRRQRSDQDSDSDQPSRKRR 1095
>gi|169166609 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 6 [Homo sapiens]
Length = 305
Score = 35.8 bits (81), Expect = 0.32
Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 7/116 (6%)
Query: 1166 ISTNNKVSKSRKKSSPSKSGAMNQSSSQKNTRKKSLKGNNKGIEKPPGKNSRQVPKSTKK 1225
+ NNK S +R +PS + ++S + R K + EK G++ + +S
Sbjct: 14 VKENNKKSSTR---APSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASS 70
Query: 1226 GKYMAAINGEKMQIGIGRGGSQTNTISSTGKTLAECIQHGGPMASMKMPSQKGLSG 1281
G + + GS T+T SS+G + + G ++ + S SG
Sbjct: 71 G----SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG 122
>gi|113415994 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 2 [Homo sapiens]
Length = 305
Score = 35.8 bits (81), Expect = 0.32
Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 7/116 (6%)
Query: 1166 ISTNNKVSKSRKKSSPSKSGAMNQSSSQKNTRKKSLKGNNKGIEKPPGKNSRQVPKSTKK 1225
+ NNK S +R +PS + ++S + R K + EK G++ + +S
Sbjct: 14 VKENNKKSSTR---APSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASS 70
Query: 1226 GKYMAAINGEKMQIGIGRGGSQTNTISSTGKTLAECIQHGGPMASMKMPSQKGLSG 1281
G + + GS T+T SS+G + + G ++ + S SG
Sbjct: 71 G----SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG 122
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 35.8 bits (81), Expect = 0.32
Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 5/136 (3%)
Query: 623 PPARKRKSKLGNRHRIQRIPSIEISASSKQISLCNDQRHASNHKEDGGLKGTLKSAPLGA 682
PP R R R R R E S S + N + +S+ KE+ + + S
Sbjct: 612 PPGRSRSKDRRRRRRDSRSSEREESQSRNKDKYRNQESKSSHRKENSESEKRMYSKSRDH 671
Query: 683 PSCANGSHLN---DITGPDSVKVKAQDTEFKGPERKVLNKIKFKSEARLKSKKVKAAGQE 739
S N D + +K +QD E K K NK K + ++ + K+ GQE
Sbjct: 672 NSSNNSREKKADRDQSPFSKIKQSSQDNELKSSMLK--NKEDEKIRSSVEKENQKSKGQE 729
Query: 740 SKPIVQMSPLLENQSS 755
+ + + + +++SS
Sbjct: 730 NDHVHEKNKKFDHESS 745
Score = 33.5 bits (75), Expect = 1.6
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 1164 GQISTNNKVSKSRKK-----------SSPSKSGAMNQSSSQKNTRKKSLKGNNKGIEKPP 1212
G++ +KV K KK SS S S + +QSSS + + + + +K +K
Sbjct: 175 GELIPKSKVKKEEKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKKKH 234
Query: 1213 GKNSRQVPKSTKKGK 1227
KNSR+ K KK K
Sbjct: 235 RKNSRKHKKEKKKRK 249
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 35.8 bits (81), Expect = 0.32
Identities = 85/424 (20%), Positives = 157/424 (37%), Gaps = 67/424 (15%)
Query: 390 QEDKGVEKKDGKDNGEKPALNKPCSGTEVEQLKNPKQGHLANSLETSGSF--SDDSSFIE 447
+++KG EK K+ EK A +K ++E+ + P+ LA + + + S++ + E
Sbjct: 166 EKEKGKEKVREKEKPEKKATHKE----KIEKKEKPETKTLAKEQKKAKTAEKSEEKTKKE 221
Query: 448 ISYDAMGEIKDCSRYMARDTNSGSSSSQQNYGLRAKRKVRYSED------YLYDV----- 496
+ ++K + + + S ++ +A +D Y+ D+
Sbjct: 222 VKGGKQEKVKQTAAKVKEVQKTPSKPKEKEDKEKAAVSKHEQKDQYAFCRYMIDIFVHGD 281
Query: 497 ----------DSLEGEKVNERKEWLPVGSKEEDDDEWCPKKRRKVTRKEPPVIIKYIIIN 546
L E+ + P ++E + + KK T+K+ IK
Sbjct: 282 LKPGQSPAIPPPLPTEQASRPTPASPALEEKEGEKKKAEKKVTSETKKKEKEDIKK---- 337
Query: 547 RFKGEKNMLVKLGKVD---ASETTVNLSENQLNKYAKLAPLKGFWQKKKKQRNTNTDSIK 603
K EK + + K + ASET + K A A K +K+ ++ ++
Sbjct: 338 --KSEKETAIDVEKKEPGKASET-----KQGTVKIAAQAAAKKDEKKEDSKKTKKPAEVE 390
Query: 604 TPFSQKQSFEPGSFEVSFLPPARKRKSKLGNRHRIQRIPSIEISASSKQISLCNDQRHAS 663
P +KQ + E PA+ K + +PS KQ+ ++
Sbjct: 391 QPKGKKQEKKEKHVE-----PAKSPKKE-------HSVPS------DKQVKAKTERA--- 429
Query: 664 NHKEDGGLKGTLKSAPLGAPSCANGSHLNDITGPDSVKVKA--QDTE-FKGPERKVLNKI 720
KE+ G K+ P + +I S K + +D E KG E KV +
Sbjct: 430 --KEEIGAVSIKKAVPGKKEEKTTKTVEQEIRKEKSGKTSSILKDKEPIKGKEEKVPASL 487
Query: 721 KFKSEARLKSKKVKAAGQESKPIVQMSPLLENQSSKANLKNEVIPGTSNSSRLSEFHEAK 780
K K K +K+ AG+E KP + + + +K E P S ++ + K
Sbjct: 488 KEKEPETKKDEKMSKAGKEVKPKPPQLQGKKEEKPEPQIKKEAKPAISEKVQIHKQDIVK 547
Query: 781 AAKS 784
K+
Sbjct: 548 PEKT 551
>gi|6857826 RNA-binding protein S1, serine-rich domain [Homo sapiens]
Length = 305
Score = 35.8 bits (81), Expect = 0.32
Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 7/116 (6%)
Query: 1166 ISTNNKVSKSRKKSSPSKSGAMNQSSSQKNTRKKSLKGNNKGIEKPPGKNSRQVPKSTKK 1225
+ NNK S +R +PS + ++S + R K + EK G++ + +S
Sbjct: 14 VKENNKKSSTR---APSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASS 70
Query: 1226 GKYMAAINGEKMQIGIGRGGSQTNTISSTGKTLAECIQHGGPMASMKMPSQKGLSG 1281
G + + GS T+T SS+G + + G ++ + S SG
Sbjct: 71 G----SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG 122
>gi|18379334 RNA-binding protein S1, serine-rich domain [Homo sapiens]
Length = 305
Score = 35.8 bits (81), Expect = 0.32
Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 7/116 (6%)
Query: 1166 ISTNNKVSKSRKKSSPSKSGAMNQSSSQKNTRKKSLKGNNKGIEKPPGKNSRQVPKSTKK 1225
+ NNK S +R +PS + ++S + R K + EK G++ + +S
Sbjct: 14 VKENNKKSSTR---APSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASS 70
Query: 1226 GKYMAAINGEKMQIGIGRGGSQTNTISSTGKTLAECIQHGGPMASMKMPSQKGLSG 1281
G + + GS T+T SS+G + + G ++ + S SG
Sbjct: 71 G----SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG 122
>gi|212549782 caspase 8 associated protein 2 [Homo sapiens]
Length = 1982
Score = 35.4 bits (80), Expect = 0.42
Identities = 71/320 (22%), Positives = 123/320 (38%), Gaps = 52/320 (16%)
Query: 346 PKRESKSGALKQSSDFSQFKVPDVSIIWGEEDKNLDKKKGKEEGQEDKGVEKKD------ 399
PK ESKS K +SD S +K ++ W +E ++ + + Q DK +E++
Sbjct: 296 PKTESKSSKFKSNSD-SDYKGERINSSWEKETPG-ERSHSRVDSQSDKKLERQSERSQNI 353
Query: 400 ------GKDNGEKPALNKPCSGT-EVEQLKNPKQGHLANSLETSGSFSDDSSFIEISYDA 452
+D E+ KP S + + + ++ L +S + +FS +SS +
Sbjct: 354 NRKEVKSQDKEERKVDQKPKSVVKDQDHWRRSERASLPHS-KNEITFSHNSSKYHLEERR 412
Query: 453 MGEIKDCSRYMARDTNSGSSSSQQNYGLRAKRKVRYSEDYLYDVDSLEGEKVNERKEWLP 512
E DC R D + S S Q R + S + +++ ++V+ +W
Sbjct: 413 GWE--DCKR----DKSVNSHSFQDG---RCPSSLSNSRTH----KNIDSKEVDAMHQWEN 459
Query: 513 VGSKEEDDDEWCPKKRRKVTRKEPPVIIKYIIINRFKGEKNMLVKLGKVDASETTVNLSE 572
K E +KR + +++E I N + L K K TT +
Sbjct: 460 TPLKAERHRTEDKRKREQESKEE-----NRHIRNEKRVPTEHLQKTNKETKKTTTDLKKQ 514
Query: 573 NQL---------NKYAKLAPLKGFWQKKKKQRN-TNTDSIKTPFSQKQSFEPGSFEVSFL 622
N+ N ++ A K K + N T +K F +K + L
Sbjct: 515 NEPKTDKGEVLDNGVSEGADNKELAMKAESGPNETKNKDLKLSFMKKLNLT--------L 566
Query: 623 PPARKRKSKLGNRHRIQRIP 642
PA+K+ N+H+I IP
Sbjct: 567 SPAKKQPVSQDNQHKITDIP 586
>gi|6912288 caspase 8 associated protein 2 [Homo sapiens]
Length = 1982
Score = 35.4 bits (80), Expect = 0.42
Identities = 71/320 (22%), Positives = 123/320 (38%), Gaps = 52/320 (16%)
Query: 346 PKRESKSGALKQSSDFSQFKVPDVSIIWGEEDKNLDKKKGKEEGQEDKGVEKKD------ 399
PK ESKS K +SD S +K ++ W +E ++ + + Q DK +E++
Sbjct: 296 PKTESKSSKFKSNSD-SDYKGERINSSWEKETPG-ERSHSRVDSQSDKKLERQSERSQNI 353
Query: 400 ------GKDNGEKPALNKPCSGT-EVEQLKNPKQGHLANSLETSGSFSDDSSFIEISYDA 452
+D E+ KP S + + + ++ L +S + +FS +SS +
Sbjct: 354 NRKEVKSQDKEERKVDQKPKSVVKDQDHWRRSERASLPHS-KNEITFSHNSSKYHLEERR 412
Query: 453 MGEIKDCSRYMARDTNSGSSSSQQNYGLRAKRKVRYSEDYLYDVDSLEGEKVNERKEWLP 512
E DC R D + S S Q R + S + +++ ++V+ +W
Sbjct: 413 GWE--DCKR----DKSVNSHSFQDG---RCPSSLSNSRTH----KNIDSKEVDAMHQWEN 459
Query: 513 VGSKEEDDDEWCPKKRRKVTRKEPPVIIKYIIINRFKGEKNMLVKLGKVDASETTVNLSE 572
K E +KR + +++E I N + L K K TT +
Sbjct: 460 TPLKAERHRTEDKRKREQESKEE-----NRHIRNEKRVPTEHLQKTNKETKKTTTDLKKQ 514
Query: 573 NQL---------NKYAKLAPLKGFWQKKKKQRN-TNTDSIKTPFSQKQSFEPGSFEVSFL 622
N+ N ++ A K K + N T +K F +K + L
Sbjct: 515 NEPKTDKGEVLDNGVSEGADNKELAMKAESGPNETKNKDLKLSFMKKLNLT--------L 566
Query: 623 PPARKRKSKLGNRHRIQRIP 642
PA+K+ N+H+I IP
Sbjct: 567 SPAKKQPVSQDNQHKITDIP 586
>gi|212549532 caspase 8 associated protein 2 [Homo sapiens]
Length = 1982
Score = 35.4 bits (80), Expect = 0.42
Identities = 71/320 (22%), Positives = 123/320 (38%), Gaps = 52/320 (16%)
Query: 346 PKRESKSGALKQSSDFSQFKVPDVSIIWGEEDKNLDKKKGKEEGQEDKGVEKKD------ 399
PK ESKS K +SD S +K ++ W +E ++ + + Q DK +E++
Sbjct: 296 PKTESKSSKFKSNSD-SDYKGERINSSWEKETPG-ERSHSRVDSQSDKKLERQSERSQNI 353
Query: 400 ------GKDNGEKPALNKPCSGT-EVEQLKNPKQGHLANSLETSGSFSDDSSFIEISYDA 452
+D E+ KP S + + + ++ L +S + +FS +SS +
Sbjct: 354 NRKEVKSQDKEERKVDQKPKSVVKDQDHWRRSERASLPHS-KNEITFSHNSSKYHLEERR 412
Query: 453 MGEIKDCSRYMARDTNSGSSSSQQNYGLRAKRKVRYSEDYLYDVDSLEGEKVNERKEWLP 512
E DC R D + S S Q R + S + +++ ++V+ +W
Sbjct: 413 GWE--DCKR----DKSVNSHSFQDG---RCPSSLSNSRTH----KNIDSKEVDAMHQWEN 459
Query: 513 VGSKEEDDDEWCPKKRRKVTRKEPPVIIKYIIINRFKGEKNMLVKLGKVDASETTVNLSE 572
K E +KR + +++E I N + L K K TT +
Sbjct: 460 TPLKAERHRTEDKRKREQESKEE-----NRHIRNEKRVPTEHLQKTNKETKKTTTDLKKQ 514
Query: 573 NQL---------NKYAKLAPLKGFWQKKKKQRN-TNTDSIKTPFSQKQSFEPGSFEVSFL 622
N+ N ++ A K K + N T +K F +K + L
Sbjct: 515 NEPKTDKGEVLDNGVSEGADNKELAMKAESGPNETKNKDLKLSFMKKLNLT--------L 566
Query: 623 PPARKRKSKLGNRHRIQRIP 642
PA+K+ N+H+I IP
Sbjct: 567 SPAKKQPVSQDNQHKITDIP 586
>gi|7662126 signal-induced proliferation-associated 1 like 1 [Homo
sapiens]
Length = 1804
Score = 35.4 bits (80), Expect = 0.42
Identities = 34/156 (21%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 658 DQRHASNHKEDGGLKGTLKSAPLGAPSCANGSHLNDITGPDSVKVKAQDTEFKGPERKVL 717
D + + G G+ AP+G P H+ G + V+A+ ++ P RK
Sbjct: 32 DDFYMRRFRSQNGSLGSSVMAPVGPPRSEGSHHITSTPGVPKMGVRARIADW--PPRKEN 89
Query: 718 NKIKFKSEARLK-SKKVKAAGQESKPIVQMSPLLENQSSKA-------NLKNEVIPGTSN 769
K +S ++ S + + +S P+ Q S + N + A LKN+ P +
Sbjct: 90 IKESSRSSQEIETSSCLDSLSSKSSPVSQGSSVSLNSNDSAMLKSIQNTLKNKTRPSENM 149
Query: 770 SSR--LSEFHEAKAAKSSTFLPTTCSSEMPLSSANV 803
SR + E + + K+ + +S++ +S +V
Sbjct: 150 DSRFLMPEAYPSSPRKALRRIRQRSNSDITISELDV 185
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,967,028
Number of Sequences: 37866
Number of extensions: 2886712
Number of successful extensions: 9675
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 9343
Number of HSP's gapped (non-prelim): 445
length of query: 1516
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1401
effective length of database: 13,892,928
effective search space: 19463992128
effective search space used: 19463992128
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.