Guide to the Human Genome
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Name: TTC32 Sequence: fasta or formatted (151aa) NCBI GI: 56606133
Description:

tetratricopeptide repeat domain 32

Referenced in:

Tetratricopeptide Domains

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.3         17           2
 C cysteine            2.0          3           1
 D aspartate           7.3         11           2
 E glutamate           8.6         13           2
 F phenylalanine       4.6          7           1
 G glycine             4.6          7           1
 H histidine           1.3          2           1
 I isoleucine          3.3          5           1
 K lysine              5.3          8           2
 L leucine             8.6         13           1
 M methionine          1.3          2           1
 N asparagine          6.0          9           2
 P proline             3.3          5           1
 Q glutamine           5.3          8           1
 R arginine            6.0          9           2
 S serine              6.0          9           2
 T threonine           4.0          6           1
 V valine              3.3          5           1
 W tryptophan          0.0          0           0
 Y tyrosine            7.9         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tetratricopeptide repeat domain 32 
OGT                   0.102   O-linked GlcNAc transferase isoform 2 
OGT                   0.102   O-linked GlcNAc transferase isoform 1 
TTC1                  0.095   tetratricopeptide repeat domain 1 
SGTB                  0.088   small glutamine-rich tetratricopeptide repeat (TPR)-...
TTC6                  0.077   PREDICTED: tetratricopeptide repeat domain 6 
TTC6                  0.077   PREDICTED: tetratricopeptide repeat domain 6 
C14orf25              0.077   PREDICTED: chromosome 14 open reading frame 25 [Hom...
TTC13                 0.077   tetratricopeptide repeat domain 13 isoform b 
TOMM34                0.074   translocase of outer mitochondrial membrane 34 [Homo...
TTC13                 0.070   tetratricopeptide repeat domain 13 isoform a 
DNAJC3                0.070   DnaJ (Hsp40) homolog, subfamily C, member 3 
CTR9                  0.063   SH2 domain binding protein 1 
STIP1                 0.060   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
SPAG1                 0.060   sperm associated antigen 1 
SPAG1                 0.060   sperm associated antigen 1 
PPP5C                 0.060   protein phosphatase 5, catalytic subunit 
RPAP3                 0.056   RNA polymerase II associated protein 3 isoform 2 [H...
RPAP3                 0.056   RNA polymerase II associated protein 3 isoform 1 [H...
DNAJC7                0.056   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
RPAP3                 0.053   RNA polymerase II associated protein 3 isoform 3 [H...
TTC36                 0.053   tetratricopeptide repeat domain 36 
PRMT10                0.049   protein arginine methyltransferase 10 (putative) [Ho...
UNC45A                0.049   smooth muscle cell associated protein-1 isoform 3 [H...
UNC45A                0.049   smooth muscle cell associated protein-1 isoform 2 [H...
TTC14                 0.049   tetratricopeptide repeat domain 14 isoform a 
TTC14                 0.049   tetratricopeptide repeat domain 14 isoform b 
FKBP5                 0.046   FK506 binding protein 5 isoform 1 
FKBP5                 0.046   FK506 binding protein 5 isoform 1 
FKBP5                 0.046   FK506 binding protein 5 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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