Guide to the Human Genome
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Search of human proteins with 56550033

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|56550033 SHQ1 homolog [Homo sapiens]
         (577 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|56550033 SHQ1 homolog [Homo sapiens]                              1154   0.0  
gi|21361796 ELL associated factor 2 [Homo sapiens]                     47   6e-05
gi|21735548 centrosomal protein 2 [Homo sapiens]                       39   0.017
gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens]       39   0.017
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]    38   0.029
gi|68348716 AF4/FMR2 family, member 3 isoform 2 [Homo sapiens]         38   0.029
gi|68348714 AF4/FMR2 family, member 3 isoform 1 [Homo sapiens]         38   0.029
gi|42794779 myosin 18A isoform b [Homo sapiens]                        38   0.029
gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo...    37   0.049
gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo...    37   0.049
gi|6912736 transient receptor potential cation channel, subfamil...    37   0.065
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ...    37   0.065
gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homo...    36   0.084
gi|57634514 SPANX-N2 protein [Homo sapiens]                            36   0.11 
gi|23097338 neurexophilin 1 precursor [Homo sapiens]                   36   0.11 
gi|118421089 chromodomain helicase DNA binding protein 2 isoform...    35   0.25 
gi|110611184 chromodomain helicase DNA binding protein 2 isoform...    35   0.25 
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa...    35   0.25 
gi|21327667 block of proliferation 1 [Homo sapiens]                    34   0.32 
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]                34   0.32 
gi|4885073 activating transcription factor 1 [Homo sapiens]            34   0.42 
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         34   0.42 
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        34   0.42 
gi|122937261 coiled-coil domain containing 85A [Homo sapiens]          34   0.42 
gi|21071001 autocrine motility factor receptor [Homo sapiens]          33   0.55 
gi|114155142 nuclear pore complex-associated protein TPR [Homo s...    33   0.55 
gi|31377846 WD repeat domain 52 [Homo sapiens]                         33   0.55 
gi|110349719 titin isoform N2-A [Homo sapiens]                         33   0.71 
gi|110349717 titin isoform novex-2 [Homo sapiens]                      33   0.71 
gi|110349713 titin isoform novex-1 [Homo sapiens]                      33   0.71 

>gi|56550033 SHQ1 homolog [Homo sapiens]
          Length = 577

 Score = 1154 bits (2984), Expect = 0.0
 Identities = 577/577 (100%), Positives = 577/577 (100%)

Query: 1   MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGSDFKFYAKPYFLRLTLPGRIVENGS 60
           MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGSDFKFYAKPYFLRLTLPGRIVENGS
Sbjct: 1   MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGSDFKFYAKPYFLRLTLPGRIVENGS 60

Query: 61  EQGSYDADKGIFTIRLPKETPGQHFEGLNMLTALLAPRKSRTAKPLVEEIGASEIPEEVV 120
           EQGSYDADKGIFTIRLPKETPGQHFEGLNMLTALLAPRKSRTAKPLVEEIGASEIPEEVV
Sbjct: 61  EQGSYDADKGIFTIRLPKETPGQHFEGLNMLTALLAPRKSRTAKPLVEEIGASEIPEEVV 120

Query: 121 DDEEFDWEIEQTPCEEVSESALNPQCHYGFGNLRSGVLQRLQDELSDVIDIKDPDFTPAA 180
           DDEEFDWEIEQTPCEEVSESALNPQCHYGFGNLRSGVLQRLQDELSDVIDIKDPDFTPAA
Sbjct: 121 DDEEFDWEIEQTPCEEVSESALNPQCHYGFGNLRSGVLQRLQDELSDVIDIKDPDFTPAA 180

Query: 181 ERRQKRLAAELAKFDPDHYLADFFEDEAIEQILKYNPWWTDKYSKMMAFLEKSQEQENHA 240
           ERRQKRLAAELAKFDPDHYLADFFEDEAIEQILKYNPWWTDKYSKMMAFLEKSQEQENHA
Sbjct: 181 ERRQKRLAAELAKFDPDHYLADFFEDEAIEQILKYNPWWTDKYSKMMAFLEKSQEQENHA 240

Query: 241 TLVSFSEEEKYQLRKFVNKSYLLDKRACRQVCYSLIDILLAYCYETRVTEGEKNVESAWN 300
           TLVSFSEEEKYQLRKFVNKSYLLDKRACRQVCYSLIDILLAYCYETRVTEGEKNVESAWN
Sbjct: 241 TLVSFSEEEKYQLRKFVNKSYLLDKRACRQVCYSLIDILLAYCYETRVTEGEKNVESAWN 300

Query: 301 IRKLSPTLCWFETWTNVHDIMVSFGRRVLCYPLYRHFKLVMKAYRDTIKILQLGKSAVLK 360
           IRKLSPTLCWFETWTNVHDIMVSFGRRVLCYPLYRHFKLVMKAYRDTIKILQLGKSAVLK
Sbjct: 301 IRKLSPTLCWFETWTNVHDIMVSFGRRVLCYPLYRHFKLVMKAYRDTIKILQLGKSAVLK 360

Query: 361 CLLDIHKIFQENDPAYILNDLYISDYCVWIQKVKSKKLAALAEALKEVSLTKAQLGLELE 420
           CLLDIHKIFQENDPAYILNDLYISDYCVWIQKVKSKKLAALAEALKEVSLTKAQLGLELE
Sbjct: 361 CLLDIHKIFQENDPAYILNDLYISDYCVWIQKVKSKKLAALAEALKEVSLTKAQLGLELE 420

Query: 421 ELEAAALLVQEEETALKAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDEL 480
           ELEAAALLVQEEETALKAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDEL
Sbjct: 421 ELEAAALLVQEEETALKAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDEL 480

Query: 481 KDSPSETVSSLQGPFLEESSAFLIVDGGVRRNTAIQESDASQGKPLASSWPLGVSGPLIE 540
           KDSPSETVSSLQGPFLEESSAFLIVDGGVRRNTAIQESDASQGKPLASSWPLGVSGPLIE
Sbjct: 481 KDSPSETVSSLQGPFLEESSAFLIVDGGVRRNTAIQESDASQGKPLASSWPLGVSGPLIE 540

Query: 541 ELGEQLKTTVQVSEPKGTTAVNRSNIQERDGCQTPNN 577
           ELGEQLKTTVQVSEPKGTTAVNRSNIQERDGCQTPNN
Sbjct: 541 ELGEQLKTTVQVSEPKGTTAVNRSNIQERDGCQTPNN 577


>gi|21361796 ELL associated factor 2 [Homo sapiens]
          Length = 260

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 5/74 (6%)

Query: 420 EELEAAALLVQEEETALKAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDE 479
           E+  + A  + + E  LKA  S+  Q + C SS      DS SS SS +EDS SDSE ++
Sbjct: 147 EDKMSPASPIDDIERELKAEASLMDQMSSCDSSS-----DSKSSSSSSSEDSSSDSEDED 201

Query: 480 LKDSPSETVSSLQG 493
            K S S+T + + G
Sbjct: 202 CKSSTSDTGNCVSG 215


>gi|21735548 centrosomal protein 2 [Homo sapiens]
          Length = 2442

 Score = 38.5 bits (88), Expect = 0.017
 Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 20/191 (10%)

Query: 335  RHFKLVMKAYRDTIKILQLGKSAVLKCLLDIHKIFQENDPAYILNDLYISDYCVWIQKVK 394
            R  K   + +RD +  LQ   S++L+  +D+ K  ++     +  D    D    +++  
Sbjct: 978  RELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQD----DSQRLVEQEV 1033

Query: 395  SKKLAALAE---ALKEVSLTKAQLGLELEELEAAALLVQEEETALKAAHSVSGQQTLCSS 451
             +KL    E     KE+   KA L L L E E   L++QE       A S+  Q+     
Sbjct: 1034 QEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQE-------ADSIRQQELSALR 1086

Query: 452  SEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLEESSAFLIVDGGVRR 511
             +  +++     +S+  E       + E+K+  ++ ++  +   LEE  A  I +  +R 
Sbjct: 1087 QDMQEAQGEQKELSAQME-----LLRQEVKEKEADFLAQ-EAQLLEELEASHITEQQLRA 1140

Query: 512  NTAIQESDASQ 522
            +   QE+ A+Q
Sbjct: 1141 SLWAQEAKAAQ 1151


>gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens]
          Length = 170

 Score = 38.5 bits (88), Expect = 0.017
 Identities = 33/98 (33%), Positives = 42/98 (42%), Gaps = 9/98 (9%)

Query: 413 AQLGLELEELEAAALLVQE--EETALKAAHSVSGQQTLCSSSEASDSEDSDS-------S 463
           A+L   L+E E   LL Q   E    + A     +    SSS +SDS  SDS       S
Sbjct: 50  AELKKALKEKENRLLLQQSIGETNVERKAKKKRSKSVTSSSSSSSDSSASDSSSESEETS 109

Query: 464 VSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLEESSA 501
            SS +EDS +D        S S T SS       +SS+
Sbjct: 110 TSSSSEDSDTDESSSSSSSSASSTTSSSSSDSDSDSSS 147



 Score = 38.5 bits (88), Expect = 0.017
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 2/91 (2%)

Query: 391 QKVKSKKLAALAEALKEVSLTKAQLGLELEELEAAALLVQEEETALKAAHSVSGQQTLCS 450
           +K +SK + + + +  + S + +    E EE   ++     +     ++ S S   T  S
Sbjct: 79  KKKRSKSVTSSSSSSSDSSASDSSS--ESEETSTSSSSEDSDTDESSSSSSSSASSTTSS 136

Query: 451 SSEASDSEDSDSSVSSGNEDSGSDSEQDELK 481
           SS  SDS+ S SS SS + DS SD E  + K
Sbjct: 137 SSSDSDSDSSSSSSSSTSTDSSSDDEPPKKK 167



 Score = 35.4 bits (80), Expect = 0.14
 Identities = 21/58 (36%), Positives = 32/58 (55%)

Query: 433 ETALKAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
           +++   + S S + +  SSSE SD+++S SS SS    + S S  D   DS S + SS
Sbjct: 95  DSSASDSSSESEETSTSSSSEDSDTDESSSSSSSSASSTTSSSSSDSDSDSSSSSSSS 152



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 19/57 (33%), Positives = 27/57 (47%)

Query: 430 QEEETALKAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSE 486
           + EET+  ++   S      SSS +S S  + SS S  + DS S S      DS S+
Sbjct: 104 ESEETSTSSSSEDSDTDESSSSSSSSASSTTSSSSSDSDSDSSSSSSSSTSTDSSSD 160



 Score = 31.6 bits (70), Expect = 2.1
 Identities = 22/86 (25%), Positives = 35/86 (40%)

Query: 394 KSKKLAALAEALKEVSLTKAQLGLELEELEAAALLVQEEETALKAAHSVSGQQTLCSSSE 453
           K+KK  + +      S + +       E E  +     E++    + S S      ++S 
Sbjct: 77  KAKKKRSKSVTSSSSSSSDSSASDSSSESEETSTSSSSEDSDTDESSSSSSSSASSTTSS 136

Query: 454 ASDSEDSDSSVSSGNEDSGSDSEQDE 479
           +S   DSDSS SS +  S   S  DE
Sbjct: 137 SSSDSDSDSSSSSSSSTSTDSSSDDE 162


>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
          Length = 1301

 Score = 37.7 bits (86), Expect = 0.029
 Identities = 22/64 (34%), Positives = 32/64 (50%)

Query: 438 AAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLE 497
           ++ S S   +  S S++SDS DSDSS SS + DS   S+  +  DS   + S       E
Sbjct: 571 SSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSE 630

Query: 498 ESSA 501
             S+
Sbjct: 631 SDSS 634



 Score = 37.7 bits (86), Expect = 0.029
 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 1/81 (1%)

Query: 450 SSSEASDSEDS-DSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLEESSAFLIVDGG 508
           +SS++SDS DS DSS SS + DS SDS + E   S S++ S        +SS        
Sbjct: 600 NSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDS 659

Query: 509 VRRNTAIQESDASQGKPLASS 529
              + +   SD+S     +SS
Sbjct: 660 SNSSNSSDSSDSSDSSDSSSS 680



 Score = 37.4 bits (85), Expect = 0.038
 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 437 KAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDS-GSDSEQDELKDSPSETVSS 490
           K+  S S      +SS++SDS DSDSS S+ + DS  SDS+  +  DS S   S+
Sbjct: 546 KSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSN 600



 Score = 35.8 bits (81), Expect = 0.11
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 450  SSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            +SS++SDS  SDSS SS + DS   S+  +  DS   + SS
Sbjct: 964  NSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSS 1004



 Score = 35.4 bits (80), Expect = 0.14
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)

Query: 451 SSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLEESSAFLIVDGG-V 509
           SS++SDS+ SDS+ SS ++ S SDS      DS   + SS      + S +    D    
Sbjct: 563 SSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDS 622

Query: 510 RRNTAIQESDASQGKPLASS 529
           + +++  ESD+S     + S
Sbjct: 623 KSDSSKSESDSSDSDSKSDS 642



 Score = 34.7 bits (78), Expect = 0.25
 Identities = 18/40 (45%), Positives = 24/40 (60%)

Query: 451 SSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
           SS++SDS DSDSS SS + +S   S+     DS   + SS
Sbjct: 809 SSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSS 848



 Score = 34.7 bits (78), Expect = 0.25
 Identities = 18/40 (45%), Positives = 25/40 (62%)

Query: 451 SSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
           SS +SDS+ SDSS SS + DS + S+  E  +S   + SS
Sbjct: 897 SSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSS 936



 Score = 34.7 bits (78), Expect = 0.25
 Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 450  SSSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            +SS++SDS D SDSS SS + DS   SE  +  DS   + SS
Sbjct: 1122 NSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSS 1163



 Score = 34.3 bits (77), Expect = 0.32
 Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 9/108 (8%)

Query: 431 EEETALKAAHSVSGQQTLCSSSEASDSED-------SDSSVSSGNEDSGSDSEQDELKDS 483
           E +++   + S S       SS+ SDS D       SDSS SS + DS S S+     DS
Sbjct: 630 ESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDS 689

Query: 484 --PSETVSSLQGPFLEESSAFLIVDGGVRRNTAIQESDASQGKPLASS 529
              S++ +S +     +SS     D     N+   +SD+S     + S
Sbjct: 690 SDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDS 737



 Score = 33.9 bits (76), Expect = 0.42
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)

Query: 450 SSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLEESSAFLIVDGGV 509
           +SS++SDS +S  S  S +   GSDS+     DS + + SS        S +    D   
Sbjct: 828 NSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNE 887

Query: 510 RRNTAIQESDASQGKPLASS 529
             N++   SD+S      SS
Sbjct: 888 SSNSS-DSSDSSNSSDSDSS 906



 Score = 33.9 bits (76), Expect = 0.42
 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 2/79 (2%)

Query: 451  SSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLEESSAFLIVDGGV 509
            SS++SDS D SDSS SS + DS   S+  +  DS   + SS      E S +    D   
Sbjct: 1186 SSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSD 1245

Query: 510  RRNTAIQESDASQGKPLAS 528
              N++   SD+S      S
Sbjct: 1246 SSNSS-DSSDSSDSSDSTS 1263



 Score = 33.5 bits (75), Expect = 0.55
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 450 SSSEASDSEDSDSSVSSGNEDS----GSDSEQDELKDSPSETVSSLQGPFLEESSAFLIV 505
           +SSE+SDS DS  S SS + DS     SDS+     DS   + SS      + S++    
Sbjct: 697 NSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSS 756

Query: 506 DGGVRRNTAIQESDASQGKPLASS 529
           D     N++   SD+S     + S
Sbjct: 757 DSSDSSNSS-DSSDSSDSSDSSDS 779



 Score = 33.5 bits (75), Expect = 0.55
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 2/81 (2%)

Query: 450  SSSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLEESSAFLIVDGG 508
            +SS++SDS D SDSS SS + DS   S   +  DS   + SS      + S +    D  
Sbjct: 1029 NSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSS 1088

Query: 509  VRRNTAIQESDASQGKPLASS 529
               N++   SD+S     + S
Sbjct: 1089 DSSNSS-DSSDSSDSSDSSDS 1108



 Score = 33.5 bits (75), Expect = 0.55
 Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 451  SSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            SS++SDS D SDSS SS + DS   S+  +  DS + + SS
Sbjct: 1105 SSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSS 1145



 Score = 33.1 bits (74), Expect = 0.71
 Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 450 SSSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
           +SS++SDS D SDSS SS + DS   S   +  DS + + SS
Sbjct: 763 NSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSS 804



 Score = 33.1 bits (74), Expect = 0.71
 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 10/79 (12%)

Query: 451 SSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLEESSAFLIVDGGVR 510
           SS +SDS DS +S  S N    SDS      DS + + SS      + S++         
Sbjct: 788 SSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNS--------- 838

Query: 511 RNTAIQESDASQGKPLASS 529
            + +   SD+S G    SS
Sbjct: 839 -SDSSDSSDSSDGSDSDSS 856



 Score = 33.1 bits (74), Expect = 0.71
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 451  SSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            SS++SDS D SDSS SS + DS   S+  +  DS   + SS
Sbjct: 1162 SSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSS 1202



 Score = 33.1 bits (74), Expect = 0.71
 Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 450  SSSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            +SS++SDS D SDSS SS + DS   S+  +  DS   + SS
Sbjct: 1179 NSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSS 1220



 Score = 32.7 bits (73), Expect = 0.93
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 438 AAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLE 497
           ++ S S      S S++SDS+ SDSS  S + DS + S+  +  DS   + SS       
Sbjct: 566 SSDSDSSDSNSSSDSDSSDSDSSDSS-DSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKS 624

Query: 498 ESS 500
           +SS
Sbjct: 625 DSS 627



 Score = 32.7 bits (73), Expect = 0.93
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 451  SSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            SS +SDS DS+SS SS + +S   S+  +  DS   + SS
Sbjct: 962  SSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSS 1001



 Score = 32.7 bits (73), Expect = 0.93
 Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 4/44 (9%)

Query: 451  SSEASDSED----SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            SSE+SDS D    SDSS SS + DS   S+  +  DS   + SS
Sbjct: 1081 SSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSS 1124



 Score = 32.7 bits (73), Expect = 0.93
 Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 450  SSSEASD-SEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            +SS++SD SE SDSS SS + DS   S+  +  DS   + SS
Sbjct: 1140 NSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSS 1181



 Score = 32.7 bits (73), Expect = 0.93
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 451  SSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            SS++SDS D SDSS SS + DS   S+  +  DS   + SS
Sbjct: 1165 SSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSS 1205



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 450 SSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLEESS 500
           S    SDS DSDSS SS + DS SDS   +  DS S + S        +SS
Sbjct: 542 SGKGKSDSSDSDSSDSSNSSDS-SDSSDSDSSDSNSSSDSDSSDSDSSDSS 591



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 3/92 (3%)

Query: 438 AAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLE 497
           +++S S      +SS++SDS  S+SS SS + DS + S+  +  DS + + SS      +
Sbjct: 718 SSNSNSSDSDSSNSSDSSDS--SNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSD 775

Query: 498 ESSAFLIVDGGVRRNTAIQESDASQGKPLASS 529
            S +    D     N++   SD+S     ++S
Sbjct: 776 SSDSSNSSDSNDSSNSS-DSSDSSNSSDSSNS 806



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 451  SSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            SS++SDS D SDSS SS + DS   S+     DS + + SS
Sbjct: 988  SSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSS 1028



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 5/83 (6%)

Query: 451  SSEASDSED----SDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLEESSAFLIVD 506
            SS++SDS D    SDSS SS + DS + S+     DS + + SS      + S +    D
Sbjct: 991  SSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSD 1050

Query: 507  GGVRRNTAIQESDASQGKPLASS 529
                 N++   SD+S     + S
Sbjct: 1051 SSDSSNSS-DSSDSSDSSDSSDS 1072



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)

Query: 451  SSEASDSED----SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            SS++SDS D    SDSS SS + DS + S+  +  DS   + SS
Sbjct: 1066 SSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSS 1109



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 450  SSSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            +SS++SDS D SDSS SS + DS   S+     DS   + SS
Sbjct: 1092 NSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSS 1133



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)

Query: 451  SSEASDSED----SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            SS++SDS D    SDSS SS + DS + S+  +  DS   T  S
Sbjct: 1222 SSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDS 1265



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 16/39 (41%), Positives = 23/39 (58%)

Query: 451  SSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVS 489
            SS++SDS DS +S  S +    SDS  D   +S S++ S
Sbjct: 1237 SSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESDSQSKS 1275



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)

Query: 451  SSEASDSED----SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            SS++SDS D    SDSS SS + DS   S+  +  DS   + SS
Sbjct: 1072 SSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSS 1115



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 451  SSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            SS++SDS D SDSS SS + DS   S   +  DS   + SS
Sbjct: 1096 SSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSS 1136



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 451  SSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            SSE+SDS D SDSS SS + DS   S+  +  +S   + SS
Sbjct: 1147 SSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSS 1187



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 451  SSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            SS++SDS D SDSS SS + DS   S+     DS   + SS
Sbjct: 1150 SSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSS 1190



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 451  SSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            SS++SDS D SDSS SS + DS   S   +  DS   + SS
Sbjct: 1153 SSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSS 1193



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 5/83 (6%)

Query: 451  SSEASDSED----SDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLEESSAFLIVD 506
            SS++SDS D    SDSS SS + DS   S+  +  DS   + SS      + S +    D
Sbjct: 1168 SSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSD 1227

Query: 507  GGVRRNTAIQESDASQGKPLASS 529
                 N +   SD+S     ++S
Sbjct: 1228 SS-DSNESSDSSDSSDSSDSSNS 1249



 Score = 31.6 bits (70), Expect = 2.1
 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 441 SVSGQQTLCSSSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
           S S       SS +SDS D SDSS SS + DS   +E     DS   + SS
Sbjct: 851 SDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSS 901



 Score = 31.6 bits (70), Expect = 2.1
 Identities = 15/41 (36%), Positives = 25/41 (60%)

Query: 450 SSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
           +SS++SDS DS+ S +S +    S+S   +  DS + + SS
Sbjct: 875 NSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSS 915



 Score = 31.6 bits (70), Expect = 2.1
 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)

Query: 450  SSSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            +SS++SDS D SDSS SS + +S   S+  +  DS + + SS
Sbjct: 981  NSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSS 1022



 Score = 31.2 bits (69), Expect = 2.7
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 7/87 (8%)

Query: 450 SSSEASDSED-SDSSVSSGNEDS--GSDSEQDELKDSPSETVSSLQGPFLEESSAFLIVD 506
           +SS++SDS + SDSS SS + DS   SDS+     DS + + SS      + S +    D
Sbjct: 790 NSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSD 849

Query: 507 G----GVRRNTAIQESDASQGKPLASS 529
           G       R+ +   SD+S     ++S
Sbjct: 850 GSDSDSSNRSDSSNSSDSSDSSDSSNS 876



 Score = 31.2 bits (69), Expect = 2.7
 Identities = 17/40 (42%), Positives = 19/40 (47%)

Query: 451 SSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
           SS +SDS DS  S  S N    SDS      DS   + SS
Sbjct: 873 SSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSS 912



 Score = 31.2 bits (69), Expect = 2.7
 Identities = 16/51 (31%), Positives = 28/51 (54%)

Query: 451 SSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLEESSA 501
           SS++SDS +S +S  S +  + SDS+  +  +S   + SS      E S++
Sbjct: 879 SSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNS 929



 Score = 31.2 bits (69), Expect = 2.7
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 451  SSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            SS++SDS D SDSS SS + DS   S+  +  +S   + SS
Sbjct: 985  SSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSS 1025



 Score = 31.2 bits (69), Expect = 2.7
 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)

Query: 451  SSEASDSED----SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            SS++SDS D    SDSS SS + DS   S+  +  DS   + SS
Sbjct: 1129 SSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSS 1172



 Score = 30.8 bits (68), Expect = 3.5
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 441  SVSGQQTLCSSSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            S S   +  +SS++SDS + SDSS SS + DS   S+     DS   + SS
Sbjct: 963  SNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSS 1013



 Score = 30.8 bits (68), Expect = 3.5
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 4/45 (8%)

Query: 450  SSSEASDSED----SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            +SS++SDS D    S+SS SS + DS + S+  +  DS   + SS
Sbjct: 1002 NSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSS 1046



 Score = 30.8 bits (68), Expect = 3.5
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 451  SSEASDSED----SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            SS++SDS D    SDSS SS + DS   S   +  DS   + SS
Sbjct: 1111 SSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSS 1154



 Score = 30.8 bits (68), Expect = 3.5
 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 451  SSEASDSEDSDSSVSSGNEDSGSDS--EQDELKDSPSETVS 489
            S+E+SDS DS  S  S N    SDS    D   DS  E+ S
Sbjct: 1231 SNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESDS 1271



 Score = 30.4 bits (67), Expect = 4.6
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 441 SVSGQQTLCSSSEASDSED----SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
           S S       SS +SDS D    SDSS SS + D+ + S+     DS   + SS
Sbjct: 898 SNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSS 951



 Score = 30.0 bits (66), Expect = 6.1
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 7/47 (14%)

Query: 451 SSEASDSEDS-------DSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
           SS++SDS DS       DSS SS + DS + S+     DS   + SS
Sbjct: 770 SSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSS 816



 Score = 30.0 bits (66), Expect = 6.1
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 451 SSEASDSED----SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
           SS +SDS D    SDSS SS + DS + S+  +  DS     S+
Sbjct: 779 SSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSN 822



 Score = 30.0 bits (66), Expect = 6.1
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 451 SSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
           SSE+S+S D S+SS SS + DS   S+     DS + + SS
Sbjct: 923 SSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSS 963



 Score = 30.0 bits (66), Expect = 6.1
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 451 SSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
           SS++SDS +S  S +S +  + SDS      DS   + SS
Sbjct: 944 SSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSS 983



 Score = 30.0 bits (66), Expect = 6.1
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 451  SSEASDSED-SDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            SS +SDS D SDSS SS + DS   S+  +  +S   + SS
Sbjct: 1090 SSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSS 1130


>gi|68348716 AF4/FMR2 family, member 3 isoform 2 [Homo sapiens]
          Length = 1251

 Score = 37.7 bits (86), Expect = 0.029
 Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 2/60 (3%)

Query: 432 EETALKA-AHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
           + TAL+A + S   QQ  C +S  S S+ S SS SSG+  S SDSE     DS +E+ SS
Sbjct: 410 QRTALRALSDSAVVQQPNCRTSVPS-SKGSSSSSSSGSSSSSSDSESSSGSDSETESSSS 468


>gi|68348714 AF4/FMR2 family, member 3 isoform 1 [Homo sapiens]
          Length = 1226

 Score = 37.7 bits (86), Expect = 0.029
 Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 2/60 (3%)

Query: 432 EETALKA-AHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
           + TAL+A + S   QQ  C +S  S S+ S SS SSG+  S SDSE     DS +E+ SS
Sbjct: 385 QRTALRALSDSAVVQQPNCRTSVPS-SKGSSSSSSSGSSSSSSDSESSSGSDSETESSSS 443


>gi|42794779 myosin 18A isoform b [Homo sapiens]
          Length = 2039

 Score = 37.7 bits (86), Expect = 0.029
 Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 5/99 (5%)

Query: 396  KKLAALAEALKEVSLTKAQLGLELEELEAAALLVQEEETALKAAHSVSGQQTLCSSSEAS 455
            +++  LA    E S  K +L ++LE LEAA   +Q +   LK A    G        E  
Sbjct: 1885 EEMGELARKEAEASRKKHELEMDLESLEAANQSLQAD---LKLAFKRIGDLQAAIEDEME 1941

Query: 456  DSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGP 494
              E+ D   S G  DS  DSE ++  D     +S  +GP
Sbjct: 1942 SDENEDLINSEG--DSDVDSELEDRVDGVKSWLSKNKGP 1978


>gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo
            sapiens]
          Length = 1272

 Score = 37.0 bits (84), Expect = 0.049
 Identities = 35/163 (21%), Positives = 77/163 (47%), Gaps = 14/163 (8%)

Query: 367  KIFQENDPAYILNDLYISDYCVWIQKVKSKKLAALAEALKEVSLTKAQLGLELEELEAAA 426
            +++ ++ P  I  D  ISD  + + + K K   +L E++++V        LE E L    
Sbjct: 960  EVWTKDHPFPIDIDYMISD-TLELLRPKIKLCNSLEESIRQVQ------DLEREFLIKLG 1012

Query: 427  LLVQEE--ETALKAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSP 484
            L+  ++  ++  +  +    ++     +E  +   ++S V+   E+ GSD++ DE ++  
Sbjct: 1013 LVNDKDSKDSMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEE 1072

Query: 485  SE-----TVSSLQGPFLEESSAFLIVDGGVRRNTAIQESDASQ 522
             E     T S+ +    EE++  +I  GG++    +++ D  Q
Sbjct: 1073 EENTDYLTDSNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQ 1115


>gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo
            sapiens]
          Length = 1272

 Score = 37.0 bits (84), Expect = 0.049
 Identities = 35/163 (21%), Positives = 77/163 (47%), Gaps = 14/163 (8%)

Query: 367  KIFQENDPAYILNDLYISDYCVWIQKVKSKKLAALAEALKEVSLTKAQLGLELEELEAAA 426
            +++ ++ P  I  D  ISD  + + + K K   +L E++++V        LE E L    
Sbjct: 960  EVWTKDHPFPIDIDYMISD-TLELLRPKIKLCNSLEESIRQVQ------DLEREFLIKLG 1012

Query: 427  LLVQEE--ETALKAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSP 484
            L+  ++  ++  +  +    ++     +E  +   ++S V+   E+ GSD++ DE ++  
Sbjct: 1013 LVNDKDSKDSMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEE 1072

Query: 485  SE-----TVSSLQGPFLEESSAFLIVDGGVRRNTAIQESDASQ 522
             E     T S+ +    EE++  +I  GG++    +++ D  Q
Sbjct: 1073 EENTDYLTDSNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQ 1115


>gi|6912736 transient receptor potential cation channel, subfamily
           C, member 5 [Homo sapiens]
          Length = 973

 Score = 36.6 bits (83), Expect = 0.065
 Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 10/110 (9%)

Query: 353 LGKSAVLKCLLDIHKIFQENDPAYILNDLYISDYCVW--IQKVKSKKLAALAEALKEVSL 410
           L K  +L    + H     ++P Y ++D  +  +C+W  I+  + +K  A A +  E++L
Sbjct: 842 LKKLGLLFSKFNGHMSEPSSEPMYTISDGIVQQHCMWQDIRYSQMEKGKAEACSQSEINL 901

Query: 411 TKAQLGLELEELEAAALLVQEEETALKAAHSVSGQQTLCSS-SEASDSED 459
           ++ +LG    E++ AA   Q  E  L  + S+    ++CSS S+  DS +
Sbjct: 902 SEVELG----EVQGAA---QSSECPLACSSSLHCASSICSSNSKLLDSSE 944


>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
           homolog 2 [Homo sapiens]
          Length = 1210

 Score = 36.6 bits (83), Expect = 0.065
 Identities = 17/36 (47%), Positives = 26/36 (72%)

Query: 450 SSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPS 485
           SS+E+  + DSDSS  S +E S SDSE++E  ++P+
Sbjct: 467 SSAESESTSDSDSSSDSESESSSSDSEENEPLETPA 502


>gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homolog
           [Homo sapiens]
          Length = 666

 Score = 36.2 bits (82), Expect = 0.084
 Identities = 19/51 (37%), Positives = 27/51 (52%)

Query: 451 SSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLEESSA 501
           S   SDS+    + +SG+  SGS+S+QDE  DS   +   L G   E+  A
Sbjct: 21  SDSGSDSDSDQENAASGSNASGSESDQDERGDSGQPSNKELFGDDSEDEGA 71


>gi|57634514 SPANX-N2 protein [Homo sapiens]
          Length = 180

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 23/93 (24%), Positives = 36/93 (38%)

Query: 406 KEVSLTKAQLGLELEELEAAALLVQEEETALKAAHSVSGQQTLCSSSEASDSEDSDSSVS 465
           K   +   QL  +     +   + +EE+  L +A   S +     SSE S  ED D   S
Sbjct: 59  KHTKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQEDEDLDSSEGSSQEDEDLDSS 118

Query: 466 SGNEDSGSDSEQDELKDSPSETVSSLQGPFLEE 498
            G+     D +  E      E + S +G   E+
Sbjct: 119 EGSSQEDEDLDSSEGSSQEDEDLDSSEGSSQED 151



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 1/76 (1%)

Query: 418 ELEELEAAALLVQEEETALKAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQ 477
           E E+L+++    QE+E  L ++   S +     SSE S  ED D   S G+     D + 
Sbjct: 98  EDEDLDSSEGSSQEDED-LDSSEGSSQEDEDLDSSEGSSQEDEDLDSSEGSSQEDEDLDP 156

Query: 478 DELKDSPSETVSSLQG 493
            E      E + S +G
Sbjct: 157 PEGSSQEDEDLDSSEG 172



 Score = 30.8 bits (68), Expect = 3.5
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 1/81 (1%)

Query: 418 ELEELEAAALLVQEEETALKAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQ 477
           E E L++A    QE+E  L ++   S +     SSE S  ED D   S G+     D + 
Sbjct: 85  EDEGLDSAEGSSQEDED-LDSSEGSSQEDEDLDSSEGSSQEDEDLDSSEGSSQEDEDLDS 143

Query: 478 DELKDSPSETVSSLQGPFLEE 498
            E      E +   +G   E+
Sbjct: 144 SEGSSQEDEDLDPPEGSSQED 164


>gi|23097338 neurexophilin 1 precursor [Homo sapiens]
          Length = 271

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 22/131 (16%)

Query: 18  AIRVPYARVSEFDVYFEGSDFKFYAKPYFLRLTLPGRIVENGSEQGSYDADKGIFTIRLP 77
           A R P  +  +F   F   DF    K   L L + G+IV++G+         G F++   
Sbjct: 104 AKRRPIVKTGKFKKMFGWGDFHSNIKTVKLNLLITGKIVDHGN---------GTFSVYFR 154

Query: 78  KETPGQHFEGLNMLTALLAPRKSRTAKPLVEEIGASEIPEEVVDDEEFDWEIEQTPCEEV 137
             + GQ     N+  +L+ P K      +VE   A +   +  D + F+  IE    E+V
Sbjct: 155 HNSTGQG----NVSVSLVPPTK------IVEFDLAQQTVIDAKDSKSFNCRIEY---EKV 201

Query: 138 SESALNPQCHY 148
            ++  N  C+Y
Sbjct: 202 DKATKNTLCNY 212


>gi|118421089 chromodomain helicase DNA binding protein 2 isoform 1
           [Homo sapiens]
          Length = 1828

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 4/74 (5%)

Query: 430 QEEETALKA---AHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELK-DSPS 485
           QEE+++L +   +HS S + +   S   S+SE      S    +S S SE  E + +S S
Sbjct: 9   QEEDSSLHSNASSHSASEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESSESQSESES 68

Query: 486 ETVSSLQGPFLEES 499
           E+  S   P L E+
Sbjct: 69  ESAGSKSQPVLPEA 82


>gi|110611184 chromodomain helicase DNA binding protein 2 isoform 2
           [Homo sapiens]
          Length = 501

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 4/74 (5%)

Query: 430 QEEETALKA---AHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELK-DSPS 485
           QEE+++L +   +HS S + +   S   S+SE      S    +S S SE  E + +S S
Sbjct: 9   QEEDSSLHSNASSHSASEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESSESQSESES 68

Query: 486 ETVSSLQGPFLEES 499
           E+  S   P L E+
Sbjct: 69  ESAGSKSQPVLPEA 82


>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
            sapiens]
          Length = 2881

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 439  AHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQ---DELKDSPSETVSSLQGPF 495
            +HS SG  +  SSS +S S  S SS SS +  S S SE+   DE +    E+ + ++  +
Sbjct: 2157 SHSRSGSSSSSSSSCSSASSSSSSSTSSSSSSSSSSSEESDSDEEEAQKRESTTHMKA-Y 2215

Query: 496  LEESSAFL 503
             EES A L
Sbjct: 2216 DEESVASL 2223



 Score = 34.7 bits (78), Expect = 0.25
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 7/77 (9%)

Query: 438  AAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPS-------ETVSS 490
            ++ S S   +  SSS +S +  S SS SS +E+S SD E+ + ++S +       E+V+S
Sbjct: 2163 SSSSSSSSCSSASSSSSSSTSSSSSSSSSSSEESDSDEEEAQKRESTTHMKAYDEESVAS 2222

Query: 491  LQGPFLEESSAFLIVDG 507
            L     E   +F + +G
Sbjct: 2223 LSTTQDETQDSFQMNNG 2239


>gi|21327667 block of proliferation 1 [Homo sapiens]
          Length = 746

 Score = 34.3 bits (77), Expect = 0.32
 Identities = 19/32 (59%), Positives = 22/32 (68%), Gaps = 2/32 (6%)

Query: 450 SSSEASDS--EDSDSSVSSGNEDSGSDSEQDE 479
           S S  SDS   DS+ SV SG EDSGSDS +D+
Sbjct: 43  SHSTGSDSGVSDSEESVFSGLEDSGSDSSEDD 74


>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
          Length = 2017

 Score = 34.3 bits (77), Expect = 0.32
 Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)

Query: 353 LGKSAVLKCLLDIH---KIFQENDPAY--ILNDLYISDYCVWIQKVKSKKLAALAEALKE 407
           L K A+L+  L+     K+ +E D A   + +DL  +D        +  +L    + L++
Sbjct: 357 LEKQALLQAQLEEQLRDKVLREKDLAQQQMQSDLDKADL-----SARVTELGLAVKRLEK 411

Query: 408 VSLTKAQLGLEL-EELEAAALLVQEEETALKAAHSVSGQQTLCSSSEASDSEDSDSSVSS 466
            +L K Q+  +L E+LEA   L  +E+ AL+       QQTL   ++A  S DS+S V  
Sbjct: 412 QNLEKDQVNKDLTEKLEALESLRLQEQAALETEDGEGLQQTLRDLAQAVLS-DSESGVQL 470

Query: 467 GNEDSGSDSEQDELK 481
              +  +D+    L+
Sbjct: 471 SGSERTADASNGSLR 485


>gi|4885073 activating transcription factor 1 [Homo sapiens]
          Length = 271

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 8/150 (5%)

Query: 434 TALKAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSG----SDSEQDELKDSPSETVS 489
           +A++ AH     Q + S SE+ +S+DS  S+ S  +  G      S +  LKD  SE   
Sbjct: 18  SAVQGAHISHIAQQVSSLSESEESQDSSDSIGSSQKAHGILARRPSYRKILKDLSSEDTR 77

Query: 490 SLQGPFLEESSAFLIVDGGVRRNTAIQESDASQGKPLASSWPLGVSGPLIEELG--EQLK 547
             +G    E+S        +   T I ++ + Q   +A +  L ++ P  + +   + L 
Sbjct: 78  GRKGD--GENSGVSAAVTSMSVPTPIYQTSSGQYIAIAPNGALQLASPGTDGVQGLQTLT 135

Query: 548 TTVQVSEPKGTTAVNRSNIQERDGCQTPNN 577
            T   S  +GTT +  +   +      P+N
Sbjct: 136 MTNSGSTQQGTTILQYAQTSDGQQILVPSN 165


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 6/129 (4%)

Query: 431 EEETALKAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
           E E  ++A        +  S S    SED +   S   E SGS + ++   +   +  S 
Sbjct: 478 EPEGPVEAEEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETSGSSASEESESEESEDAQSQ 537

Query: 491 LQGPFLEESSAFLIVDGGVRRNTAIQESDASQGKPLASSWPLGVSGPLIEELGEQLKTTV 550
            Q    EE   F  V+  + R+    E+DA  G P      LG    + +     +    
Sbjct: 538 SQADEEEEDDDFG-VEYLLARDEEQSEADAGSGPPTPGPTTLGPKKEITD-----IAAAA 591

Query: 551 QVSEPKGTT 559
           +  +PKG T
Sbjct: 592 ESLQPKGYT 600


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 20/62 (32%), Positives = 31/62 (50%)

Query: 431  EEETALKAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSS 490
            ++ +AL A      +++  SSS +S S  S SS SS +  SGS S   E    P +   +
Sbjct: 2516 QQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVA 2575

Query: 491  LQ 492
            L+
Sbjct: 2576 LK 2577



 Score = 33.9 bits (76), Expect = 0.42
 Identities = 21/60 (35%), Positives = 27/60 (45%)

Query: 435  ALKAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGP 494
            AL+ A       +  SSS +S S  S SS SS +  S SDSE   L   P   +  +  P
Sbjct: 2523 ALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSP 2582



 Score = 33.1 bits (74), Expect = 0.71
 Identities = 20/54 (37%), Positives = 23/54 (42%)

Query: 432  EETALKAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPS 485
            E T  K     S   +  SSS +S S  S SS SS +  S S S       SPS
Sbjct: 2597 EPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS 2650



 Score = 30.8 bits (68), Expect = 3.5
 Identities = 18/50 (36%), Positives = 23/50 (46%)

Query: 437  KAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSE 486
            K   S S   +  SSS +S S  S SS SS +  S S S       SP++
Sbjct: 2604 KRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAK 2653



 Score = 30.4 bits (67), Expect = 4.6
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 9/110 (8%)

Query: 398  LAALAEALKEVSLTKAQLGLELEELEAAALLVQEEET--ALKA------AHSVSGQQTLC 449
            L+ L+  LKE+S +  +   E+EE  A +L + + ++  +L+A      A S  G     
Sbjct: 1253 LSHLSSELKEMSTSNFESSPEVEERPAVSLTLDQSQSQASLEAVEVPSMASSWGGPHFSP 1312

Query: 450  SSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDS-PSETVSSLQGPFLEE 498
               E S+S   ++S  S  E   S     E+     SE    L GPFL +
Sbjct: 1313 EHKELSNSPLRENSFGSPLEFRNSGPLGTEMNTGFSSEVKEDLNGPFLNQ 1362


>gi|122937261 coiled-coil domain containing 85A [Homo sapiens]
          Length = 553

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 11/114 (9%)

Query: 393 VKSKKLAALAEALKEVSLTKAQLGLELEELEAAALLVQEEETALKAAH--SVSGQQTLCS 450
           V  K++A   + LK++ + + ++  E  EL+   +L+ EE+ A  A    S+  Q +LC 
Sbjct: 136 VMHKEVALYLQKLKDLEVKQEEVVKENMELKELCVLLDEEKGAGCAGSRCSIDSQASLCQ 195

Query: 451 SSEAS-----DSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLEES 499
            + ++     D  D  S+ S+G+ DS    +      SP      LQ P  E S
Sbjct: 196 LTASTAPYVRDVGDGSSTSSTGSTDSPDHHKHHASSGSPEH----LQKPRSEGS 245


>gi|21071001 autocrine motility factor receptor [Homo sapiens]
          Length = 643

 Score = 33.5 bits (75), Expect = 0.55
 Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 5/96 (5%)

Query: 77  PKETPGQHFEGLNMLTALLAPRKSRTAKPLVEEIGASEIPEEVVDDEEFDWEIEQTPCEE 136
           P+  PG+     + LTA L P     A+P      A ++ + ++ D  F W +  T C  
Sbjct: 39  PEAGPGEP----DQLTASLQPEPPAPARPSAGGPRARDVAQYLLSDSLFVWVLVNTACCV 94

Query: 137 VSESALNPQCHYGFGNLRSGVLQRLQDELSDVIDIK 172
           +   A   QC   FG LR    Q L+D+  + I  K
Sbjct: 95  LMLVAKLIQC-IVFGPLRVSERQHLKDKFWNFIFYK 129


>gi|114155142 nuclear pore complex-associated protein TPR [Homo
           sapiens]
          Length = 2363

 Score = 33.5 bits (75), Expect = 0.55
 Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 2/92 (2%)

Query: 401 LAEALKEVSLTKAQLGLELEELEAAALLVQEEETALKAAHSVSGQQTLCSSSEASDSEDS 460
           L E LKE + TK +L L+L+EL+A+ + V+  E  L+    +   Q    ++E      +
Sbjct: 148 LNEKLKESNTTKGELQLKLDELQASDVSVKYREKRLEQEKELLHSQNTWLNTELKTK--T 205

Query: 461 DSSVSSGNEDSGSDSEQDELKDSPSETVSSLQ 492
           D  ++ G E      E     ++  E VS L+
Sbjct: 206 DELLALGREKGNEILELKCNLENKKEEVSRLE 237


>gi|31377846 WD repeat domain 52 [Homo sapiens]
          Length = 982

 Score = 33.5 bits (75), Expect = 0.55
 Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 10/101 (9%)

Query: 455 SDSEDSDSSVSSGNEDSGSDSEQDE--LKDSPSETVSSLQGPFLEESSAFLIVDGGVRRN 512
           +   D   S+ S   +S S  ++D   L+D   ET +  +G +LEE S    ++G +   
Sbjct: 16  TSKSDGKKSLRSSKSESRSPVQEDNTFLEDDTDETFTKGEGSYLEEDSDEERLEGSL--- 72

Query: 513 TAIQESDASQGKPLASSWPLGVSGPLIEELGEQLKTTVQVS 553
                S    G   +++ P     P +EE  E++K  +  S
Sbjct: 73  -----SSFQYGDLQSTTVPQQTPAPAVEEAEEEVKKKISES 108


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 33.1 bits (74), Expect = 0.71
 Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 5/99 (5%)

Query: 428   LVQE--EETALKAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPS 485
             LV+E   E  L+ +   S Q +  S S    +   ++S SS +  S S   + +     +
Sbjct: 33226 LVEEPSREVVLRTSGDTSLQGSFSSQSVQMSASKQEASFSSFSSSSASSMTEMKFASMSA 33285

Query: 486   ETVSSLQGPFLEESSAFLIVDGGVRRNTAIQESDASQGK 524
             +++SS+Q  F+E SS+  +   G+   T ++ S +   K
Sbjct: 33286 QSMSSMQESFVEMSSSSFM---GISNMTQLESSTSKMLK 33321


>gi|110349717 titin isoform novex-2 [Homo sapiens]
          Length = 27118

 Score = 33.1 bits (74), Expect = 0.71
 Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 5/99 (5%)

Query: 428   LVQE--EETALKAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPS 485
             LV+E   E  L+ +   S Q +  S S    +   ++S SS +  S S   + +     +
Sbjct: 26921 LVEEPSREVVLRTSGDTSLQGSFSSQSVQMSASKQEASFSSFSSSSASSMTEMKFASMSA 26980

Query: 486   ETVSSLQGPFLEESSAFLIVDGGVRRNTAIQESDASQGK 524
             +++SS+Q  F+E SS+  +   G+   T ++ S +   K
Sbjct: 26981 QSMSSMQESFVEMSSSSFM---GISNMTQLESSTSKMLK 27016


>gi|110349713 titin isoform novex-1 [Homo sapiens]
          Length = 27051

 Score = 33.1 bits (74), Expect = 0.71
 Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 5/99 (5%)

Query: 428   LVQE--EETALKAAHSVSGQQTLCSSSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPS 485
             LV+E   E  L+ +   S Q +  S S    +   ++S SS +  S S   + +     +
Sbjct: 26854 LVEEPSREVVLRTSGDTSLQGSFSSQSVQMSASKQEASFSSFSSSSASSMTEMKFASMSA 26913

Query: 486   ETVSSLQGPFLEESSAFLIVDGGVRRNTAIQESDASQGK 524
             +++SS+Q  F+E SS+  +   G+   T ++ S +   K
Sbjct: 26914 QSMSSMQESFVEMSSSSFM---GISNMTQLESSTSKMLK 26949


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.132    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,558,911
Number of Sequences: 37866
Number of extensions: 987599
Number of successful extensions: 4747
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 4129
Number of HSP's gapped (non-prelim): 554
length of query: 577
length of database: 18,247,518
effective HSP length: 108
effective length of query: 469
effective length of database: 14,157,990
effective search space: 6640097310
effective search space used: 6640097310
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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