SHQ1 33110

Name: SHQ1	Sequence: fasta or formatted (577aa)		NCBI GI: 56550033
Description: SHQ1 homolog		Referenced in: Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 42 3 C cysteine 1.9 11 1 D aspartate 6.6 38 2 E glutamate 10.2 59 3 F phenylalanine 4.2 24 2 G glycine 4.7 27 2 H histidine 1.4 8 1 I isoleucine 4.7 27 1 K lysine 6.2 36 2 L leucine 10.7 62 2 M methionine 1.0 6 2 N asparagine 3.1 18 2 P proline 4.5 26 1 Q glutamine 4.9 28 2 R arginine 4.3 25 2 S serine 9.0 52 3 T threonine 4.7 27 2 V valine 5.7 33 2 W tryptophan 1.4 8 2 Y tyrosine 3.5 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SHQ1 homolog EAF2 0.019 ELL associated factor 2 CEP250 0.012 centrosomal protein 2 ZCCHC10 0.012 zinc finger, CCHC domain containing 10 DSPP 0.012 dentin sialophosphoprotein preproprotein AFF3 0.012 AF4/FMR2 family, member 3 isoform 2 AFF3 0.012 AF4/FMR2 family, member 3 isoform 1 MYO18A 0.012 myosin 18A isoform b UPF2 0.011 UPF2 regulator of nonsense transcripts homolog [Homo... UPF2 0.011 UPF2 regulator of nonsense transcripts homolog [Homo... TRPC5 0.011 transient receptor potential cation channel, subfamil... AFF1 0.011 myeloid/lymphoid or mixed-lineage leukemia trithorax ... LEO1 0.010 Leo1, Paf1/RNA polymerase II complex component, homo... SPANXN2 0.010 SPANX-N2 protein NXPH1 0.010 neurexophilin 1 precursor CHD2 0.009 chromodomain helicase DNA binding protein 2 isoform... CHD2 0.009 chromodomain helicase DNA binding protein 2 isoform... CHD9 0.009 chromodomain helicase DNA binding protein 9 BOP1 0.008 block of proliferation 1 CROCC 0.008 ciliary rootlet coiled-coil ATF1 0.008 activating transcription factor 1 SRCAP 0.008 Snf2-related CBP activator protein SRRM2 0.008 splicing coactivator subunit SRm300 CCDC85A 0.008 coiled-coil domain containing 85A AMFR 0.007 autocrine motility factor receptor TPR 0.007 nuclear pore complex-associated protein TPR WDR52 0.007 WD repeat domain 52 TTN 0.007 titin isoform N2-A TTN 0.007 titin isoform novex-2 TTN 0.007 titin isoform novex-1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.