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Search of human proteins with 56090146
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56090146 jumonji domain containing 8 [Homo sapiens]
(285 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56090146 jumonji domain containing 8 [Homo sapiens] 602 e-173
gi|125988395 jumonji domain containing 6 isoform 1 [Homo sapiens] 65 5e-11
gi|125988389 jumonji domain containing 6 isoform 2 [Homo sapiens] 65 5e-11
gi|239788849 jumonji domain containing 4 isoform 2 [Homo sapiens] 55 9e-08
gi|239788847 jumonji domain containing 4 isoform 1 [Homo sapiens] 55 9e-08
gi|21314714 Hspb associated protein 1 [Homo sapiens] 52 8e-07
gi|223942018 jumonji domain containing 5 isoform 1 [Homo sapiens] 44 2e-04
gi|223942014 jumonji domain containing 5 isoform 2 [Homo sapiens] 44 2e-04
gi|89242134 hypothetical protein LOC129450 [Homo sapiens] 37 0.015
gi|167860114 jumonji domain containing 7 [Homo sapiens] 36 0.044
gi|148596936 hypoxia-inducible factor 1, alpha subunit inhibitor... 33 0.29
gi|47132529 suppression of tumorigenicity 5 isoform 1 [Homo sapi... 32 0.64
gi|47132532 suppression of tumorigenicity 5 isoform 1 [Homo sapi... 32 0.64
gi|239745235 PREDICTED: hypothetical protein [Homo sapiens] 32 0.83
gi|118402590 myosin XV [Homo sapiens] 31 1.1
gi|38788260 bromodomain PHD finger transcription factor isoform ... 31 1.1
gi|38788274 bromodomain PHD finger transcription factor isoform ... 31 1.1
gi|239748034 PREDICTED: hypothetical protein [Homo sapiens] 31 1.4
gi|239741926 PREDICTED: hypothetical protein XP_002342353 [Homo ... 31 1.4
gi|143770880 laminin, beta 4 [Homo sapiens] 31 1.4
gi|239745773 PREDICTED: hypothetical protein XP_002343550 [Homo ... 30 1.9
gi|239745771 PREDICTED: hypothetical protein XP_002343549 [Homo ... 30 1.9
gi|239745769 PREDICTED: hypothetical protein XP_002343548 [Homo ... 30 1.9
gi|59806357 submaxillary gland androgen regulated protein 3 homo... 30 2.4
gi|5729962 submaxillary gland androgen regulated protein 3 homol... 30 2.4
gi|24497554 homeobox A13 [Homo sapiens] 29 4.1
gi|150170710 hypothetical protein LOC728118 [Homo sapiens] 29 4.1
gi|239758167 PREDICTED: hypothetical protein XP_002346321 [Homo ... 29 5.4
gi|239744140 PREDICTED: hypothetical protein [Homo sapiens] 29 5.4
gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo sap... 29 5.4
>gi|56090146 jumonji domain containing 8 [Homo sapiens]
Length = 285
Score = 602 bits (1553), Expect = e-173
Identities = 285/285 (100%), Positives = 285/285 (100%)
Query: 1 MAGGWAQGSRRAARLPEGGRLMAPASRLLALWALAAVALPGSGAEGDGGWRPGGPGAVAE 60
MAGGWAQGSRRAARLPEGGRLMAPASRLLALWALAAVALPGSGAEGDGGWRPGGPGAVAE
Sbjct: 1 MAGGWAQGSRRAARLPEGGRLMAPASRLLALWALAAVALPGSGAEGDGGWRPGGPGAVAE 60
Query: 61 EERCTVERRADLTYAEFVQQYAFVRPVILQGLTDNSRFRALCSRDRLLASFGDRVVRLST 120
EERCTVERRADLTYAEFVQQYAFVRPVILQGLTDNSRFRALCSRDRLLASFGDRVVRLST
Sbjct: 61 EERCTVERRADLTYAEFVQQYAFVRPVILQGLTDNSRFRALCSRDRLLASFGDRVVRLST 120
Query: 121 ANTYSYHKVDLPFQEYVEQLLHPQDPTSLGNDTLYFFGDNNFTEWASLFRHYSPPPFGLL 180
ANTYSYHKVDLPFQEYVEQLLHPQDPTSLGNDTLYFFGDNNFTEWASLFRHYSPPPFGLL
Sbjct: 121 ANTYSYHKVDLPFQEYVEQLLHPQDPTSLGNDTLYFFGDNNFTEWASLFRHYSPPPFGLL 180
Query: 181 GTAPAYSFGIAGAGSGVPFHWHGPGYSEVIYGRKRWFLYPPEKTPEFHPNKTTLAWLRDT 240
GTAPAYSFGIAGAGSGVPFHWHGPGYSEVIYGRKRWFLYPPEKTPEFHPNKTTLAWLRDT
Sbjct: 181 GTAPAYSFGIAGAGSGVPFHWHGPGYSEVIYGRKRWFLYPPEKTPEFHPNKTTLAWLRDT 240
Query: 241 YPALPPSARPLECTIRAGEVLYFPDRWWHATLNLDTSVFISTFLG 285
YPALPPSARPLECTIRAGEVLYFPDRWWHATLNLDTSVFISTFLG
Sbjct: 241 YPALPPSARPLECTIRAGEVLYFPDRWWHATLNLDTSVFISTFLG 285
>gi|125988395 jumonji domain containing 6 isoform 1 [Homo sapiens]
Length = 414
Score = 65.5 bits (158), Expect = 5e-11
Identities = 66/259 (25%), Positives = 109/259 (42%), Gaps = 44/259 (16%)
Query: 55 PGAVAEEERCTVERR--ADLTYAEFVQQYAF-VRPVILQGLTDNSRFRALCSRDRLLASF 111
P AVA+ VER L+ EFV++Y +PV+L + + + +RL +
Sbjct: 39 PAAVADN----VERADALQLSVEEFVERYERPYKPVVLLNAQEGWSAQEKWTLERLKRKY 94
Query: 112 GDRVVRLSTANTYSYHKVDLPFQEYVEQLLHPQDPTSLGNDTLYFFGDNNFTEWAS---L 168
++ + N + V + + Y+E + +D + LY F D+++ E L
Sbjct: 95 RNQKFKCGEDN--DGYSVKMKMKYYIEYMESTRD-----DSPLYIF-DSSYGEHPKRRKL 146
Query: 169 FRHYSPPPF---GLLGTA-----PAYSFGIAG---AGSGVPFHWHGPG-YSEVIYGRKRW 216
Y P F L A P Y + + G +G+G+ G ++ ++ G KRW
Sbjct: 147 LEDYKVPKFFTDDLFQYAGEKRRPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRW 206
Query: 217 FLYPPEKTPEF---------HPNKTTLAWLRDTYPAL-----PPSARPLECTIRAGEVLY 262
L+P E + + W YP PP +PLE + GE ++
Sbjct: 207 CLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKPLEILQKPGETVF 266
Query: 263 FPDRWWHATLNLDTSVFIS 281
P WWH LNLDT++ I+
Sbjct: 267 VPGGWWHVVLNLDTTIAIT 285
>gi|125988389 jumonji domain containing 6 isoform 2 [Homo sapiens]
Length = 403
Score = 65.5 bits (158), Expect = 5e-11
Identities = 66/259 (25%), Positives = 109/259 (42%), Gaps = 44/259 (16%)
Query: 55 PGAVAEEERCTVERR--ADLTYAEFVQQYAF-VRPVILQGLTDNSRFRALCSRDRLLASF 111
P AVA+ VER L+ EFV++Y +PV+L + + + +RL +
Sbjct: 39 PAAVADN----VERADALQLSVEEFVERYERPYKPVVLLNAQEGWSAQEKWTLERLKRKY 94
Query: 112 GDRVVRLSTANTYSYHKVDLPFQEYVEQLLHPQDPTSLGNDTLYFFGDNNFTEWAS---L 168
++ + N + V + + Y+E + +D + LY F D+++ E L
Sbjct: 95 RNQKFKCGEDN--DGYSVKMKMKYYIEYMESTRD-----DSPLYIF-DSSYGEHPKRRKL 146
Query: 169 FRHYSPPPF---GLLGTA-----PAYSFGIAG---AGSGVPFHWHGPG-YSEVIYGRKRW 216
Y P F L A P Y + + G +G+G+ G ++ ++ G KRW
Sbjct: 147 LEDYKVPKFFTDDLFQYAGEKRRPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRW 206
Query: 217 FLYPPEKTPEF---------HPNKTTLAWLRDTYPAL-----PPSARPLECTIRAGEVLY 262
L+P E + + W YP PP +PLE + GE ++
Sbjct: 207 CLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKPLEILQKPGETVF 266
Query: 263 FPDRWWHATLNLDTSVFIS 281
P WWH LNLDT++ I+
Sbjct: 267 VPGGWWHVVLNLDTTIAIT 285
>gi|239788849 jumonji domain containing 4 isoform 2 [Homo sapiens]
Length = 447
Score = 54.7 bits (130), Expect = 9e-08
Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 186 YSFGIAG-AGSGVPFH---WHGPGYSEVIYGRKRWFLYPP---EKTPEFH---PNKTTLA 235
Y F AG AGS PFH + +S + GRK+W L+PP E + H P T
Sbjct: 220 YRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQEEALRDRHGNLPYDVTSP 279
Query: 236 WLRDTY--PALPPSARPLECTIRAGEVLYFPDRWWHATLNLDTSVFIS 281
L DT+ P + PLE T AGE+++ P W H NLD ++ I+
Sbjct: 280 ALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHNLDDTISIN 327
>gi|239788847 jumonji domain containing 4 isoform 1 [Homo sapiens]
Length = 463
Score = 54.7 bits (130), Expect = 9e-08
Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 186 YSFGIAG-AGSGVPFH---WHGPGYSEVIYGRKRWFLYPP---EKTPEFH---PNKTTLA 235
Y F AG AGS PFH + +S + GRK+W L+PP E + H P T
Sbjct: 220 YRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQEEALRDRHGNLPYDVTSP 279
Query: 236 WLRDTY--PALPPSARPLECTIRAGEVLYFPDRWWHATLNLDTSVFIS 281
L DT+ P + PLE T AGE+++ P W H NLD ++ I+
Sbjct: 280 ALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHNLDDTISIN 327
>gi|21314714 Hspb associated protein 1 [Homo sapiens]
Length = 488
Score = 51.6 bits (122), Expect = 8e-07
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 14/128 (10%)
Query: 162 FTEWASLFRHYSPPPFGLLG-TAPAYSFGIAGAGSGVPFHWHGPGYSEV--IYGRKRWFL 218
F + LF+ FG G + I G+ P H G + V + GRKRW L
Sbjct: 136 FEDKTDLFQDVKWSDFGFPGRNGQESTLWIGSLGAHTPCHLDSYGCNLVFQVQGRKRWHL 195
Query: 219 YPPEKTPEFHPNK------TTLAWLRDTYPALP--PSARPLE---CTIRAGEVLYFPDRW 267
+PPE TP +P + + + + P L P R + T+ G+VL+ P W
Sbjct: 196 FPPEDTPFLYPTRIPYEESSVFSKINVVNPDLKRFPQFRKAQRHAVTLSPGQVLFVPRHW 255
Query: 268 WHATLNLD 275
WH ++D
Sbjct: 256 WHYVESID 263
>gi|223942018 jumonji domain containing 5 isoform 1 [Homo sapiens]
Length = 454
Score = 43.5 bits (101), Expect = 2e-04
Identities = 48/214 (22%), Positives = 82/214 (38%), Gaps = 22/214 (10%)
Query: 85 RPVILQGLTDNSRFRALCSRDRLLASFGDRVVRLSTANTYS---YHKVDLPFQEYVEQLL 141
RPVIL+G+ D+ S + + G R V + + Y+ + + + E++ + +
Sbjct: 242 RPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGSRYTDEEWSQTLMTVNEFISKYI 301
Query: 142 HPQDPTSLGNDTLYFFGDNNFTEWASLFRHYSPPPFGLLGTAPAYSFGIAG----AGSGV 197
+P +G Y F + L + S P + LG I G+
Sbjct: 302 -VNEPRDVG----YLAQHQLFDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTIS 356
Query: 198 PFHWHGP-GYSEVIYGRKRWFLYPPEKTPEFHPNKTTLAWLRDTYPALPPSARP------ 250
P H + + GRK LY P+++ +P+ T L P
Sbjct: 357 PLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAK 416
Query: 251 ---LECTIRAGEVLYFPDRWWHATLNLDTSVFIS 281
L C + GE+L+ P ++WH LD S +S
Sbjct: 417 APFLSCILSPGEILFIPVKYWHYVRALDLSFSVS 450
>gi|223942014 jumonji domain containing 5 isoform 2 [Homo sapiens]
Length = 416
Score = 43.5 bits (101), Expect = 2e-04
Identities = 48/214 (22%), Positives = 82/214 (38%), Gaps = 22/214 (10%)
Query: 85 RPVILQGLTDNSRFRALCSRDRLLASFGDRVVRLSTANTYS---YHKVDLPFQEYVEQLL 141
RPVIL+G+ D+ S + + G R V + + Y+ + + + E++ + +
Sbjct: 204 RPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGSRYTDEEWSQTLMTVNEFISKYI 263
Query: 142 HPQDPTSLGNDTLYFFGDNNFTEWASLFRHYSPPPFGLLGTAPAYSFGIAG----AGSGV 197
+P +G Y F + L + S P + LG I G+
Sbjct: 264 -VNEPRDVG----YLAQHQLFDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTIS 318
Query: 198 PFHWHGP-GYSEVIYGRKRWFLYPPEKTPEFHPNKTTLAWLRDTYPALPPSARP------ 250
P H + + GRK LY P+++ +P+ T L P
Sbjct: 319 PLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAK 378
Query: 251 ---LECTIRAGEVLYFPDRWWHATLNLDTSVFIS 281
L C + GE+L+ P ++WH LD S +S
Sbjct: 379 APFLSCILSPGEILFIPVKYWHYVRALDLSFSVS 412
>gi|89242134 hypothetical protein LOC129450 [Homo sapiens]
Length = 315
Score = 37.4 bits (85), Expect = 0.015
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 210 IYGRKRWFLYPPEKTPEFHPNKTTLAWLRDTYPALPP-----SARPLECTIRAGEVLYFP 264
+ G+KR L+ P + T L P L AR EC++ AG+VL+ P
Sbjct: 171 VTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIP 230
Query: 265 DRWWHATLNLDTSVFISTF 283
W+H ++ + V ++ F
Sbjct: 231 ALWFHNVISEEFGVGVNIF 249
>gi|167860114 jumonji domain containing 7 [Homo sapiens]
Length = 316
Score = 35.8 bits (81), Expect = 0.044
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 241 YPALPPSARPLECTIRAGEVLYFPDRWWH 269
YP+ A+ L CT+RAGE+LY P W+H
Sbjct: 250 YPSYS-QAQALRCTVRAGEMLYLPALWFH 277
>gi|148596936 hypoxia-inducible factor 1, alpha subunit inhibitor
[Homo sapiens]
Length = 349
Score = 33.1 bits (74), Expect = 0.29
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 11/87 (12%)
Query: 194 GSGVPFHW-HGPGYSEVIYGRKRWFLYPPEKT------PEFHP--NKTTLAWLRDTYPAL 244
G+ P H+ + I G KR L+PP++ P HP ++ + + Y
Sbjct: 193 GNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERF 252
Query: 245 PPSARPL--ECTIRAGEVLYFPDRWWH 269
P + E + G+VLY P WWH
Sbjct: 253 PNFQNVVGYETVVGPGDVLYIPMYWWH 279
>gi|47132529 suppression of tumorigenicity 5 isoform 1 [Homo
sapiens]
Length = 1137
Score = 32.0 bits (71), Expect = 0.64
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 7 QGSRRAARL-----PEGGRLMAPASRLLALWALAAVALPGSGAEGDGGWRPGGPGAVAEE 61
+G R+ L P GG ++ SR + + +A A P EG G +PG PG
Sbjct: 312 RGKRKTGTLGSLEEPAGGASVSAGSRAVGVAGVAGEAGPPPEREGSGSTKPGTPGNSPSS 371
Query: 62 ER 63
+R
Sbjct: 372 QR 373
>gi|47132532 suppression of tumorigenicity 5 isoform 1 [Homo
sapiens]
Length = 1137
Score = 32.0 bits (71), Expect = 0.64
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 7 QGSRRAARL-----PEGGRLMAPASRLLALWALAAVALPGSGAEGDGGWRPGGPGAVAEE 61
+G R+ L P GG ++ SR + + +A A P EG G +PG PG
Sbjct: 312 RGKRKTGTLGSLEEPAGGASVSAGSRAVGVAGVAGEAGPPPEREGSGSTKPGTPGNSPSS 371
Query: 62 ER 63
+R
Sbjct: 372 QR 373
>gi|239745235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 664
Score = 31.6 bits (70), Expect = 0.83
Identities = 16/39 (41%), Positives = 19/39 (48%)
Query: 21 LMAPASRLLALWALAAVALPGSGAEGDGGWRPGGPGAVA 59
L+A L ALW ++A AL D GW P PG A
Sbjct: 6 LLAAGILLAALWMVSASALNLPSTHKDPGWPPSAPGTSA 44
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 31.2 bits (69), Expect = 1.1
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 206 YSEVIYGRKRWFLYPPEKTPEFHPNKTTLAWLRDTYPALPP 246
Y+E +YG +YPPE P F+P ++ A++ YP +PP
Sbjct: 380 YAEGVYGGGDEAIYPPE-VPYFYPEESASAFV---YPWVPP 416
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 31.2 bits (69), Expect = 1.1
Identities = 15/35 (42%), Positives = 17/35 (48%)
Query: 36 AVALPGSGAEGDGGWRPGGPGAVAEEERCTVERRA 70
+ + PG G G GG R GG G R T RRA
Sbjct: 86 STSAPGRGGRGGGGGRTGGGGGGGHLARTTAARRA 120
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 31.2 bits (69), Expect = 1.1
Identities = 15/35 (42%), Positives = 17/35 (48%)
Query: 36 AVALPGSGAEGDGGWRPGGPGAVAEEERCTVERRA 70
+ + PG G G GG R GG G R T RRA
Sbjct: 86 STSAPGRGGRGGGGGRTGGGGGGGHLARTTAARRA 120
>gi|239748034 PREDICTED: hypothetical protein [Homo sapiens]
Length = 206
Score = 30.8 bits (68), Expect = 1.4
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Query: 1 MAGGWAQGSRRAARLPEGGRLMAPASRLLAL--------WALAAVALPGSGAEGDGG-WR 51
+ GG S+R + +GG +P L WAL V + G G EG G W
Sbjct: 114 LRGGHHASSQRLCQTLDGGHPDSPCGASLEAGGWARAGWWALLGVPVGGGGEEGTGSLWA 173
Query: 52 PGG 54
P G
Sbjct: 174 PAG 176
>gi|239741926 PREDICTED: hypothetical protein XP_002342353 [Homo
sapiens]
Length = 206
Score = 30.8 bits (68), Expect = 1.4
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Query: 1 MAGGWAQGSRRAARLPEGGRLMAPASRLLAL--------WALAAVALPGSGAEGDGG-WR 51
+ GG S+R + +GG +P L WAL V + G G EG G W
Sbjct: 114 LRGGHHASSQRLCQTLDGGHPDSPCGASLEAGGWARAGWWALLGVPVGGGGEEGTGSLWA 173
Query: 52 PGG 54
P G
Sbjct: 174 PAG 176
>gi|143770880 laminin, beta 4 [Homo sapiens]
Length = 1761
Score = 30.8 bits (68), Expect = 1.4
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 155 YFFGDNNF----TEWASLFRHYSPPPFGLLGTAPAYSFGIAGAGSGVPFHWHGPGYSEVI 210
YFF NF E A+ + +P G +PA + G P W GPG++ V+
Sbjct: 543 YFFAPLNFYLYEAEEATTLQGLAPLGSETFGQSPAVHVVLGEPVPGNPVTWTGPGFARVL 602
Query: 211 YG 212
G
Sbjct: 603 PG 604
>gi|239745773 PREDICTED: hypothetical protein XP_002343550 [Homo
sapiens]
Length = 323
Score = 30.4 bits (67), Expect = 1.9
Identities = 22/49 (44%), Positives = 23/49 (46%), Gaps = 8/49 (16%)
Query: 4 GWAQGSRRAARLPEGGRLMAPASRLLALWALAAVALPGSGAEGDGGWRP 52
GWA GSRR AR PAS L A A AA +PG G G P
Sbjct: 96 GWAPGSRRGAR-------SLPASPLGA-QARAAACVPGKGGAASRGDTP 136
>gi|239745771 PREDICTED: hypothetical protein XP_002343549 [Homo
sapiens]
Length = 323
Score = 30.4 bits (67), Expect = 1.9
Identities = 22/49 (44%), Positives = 23/49 (46%), Gaps = 8/49 (16%)
Query: 4 GWAQGSRRAARLPEGGRLMAPASRLLALWALAAVALPGSGAEGDGGWRP 52
GWA GSRR AR PAS L A A AA +PG G G P
Sbjct: 96 GWAPGSRRGAR-------SLPASPLGA-QARAAACVPGKGGAASRGDTP 136
>gi|239745769 PREDICTED: hypothetical protein XP_002343548 [Homo
sapiens]
Length = 323
Score = 30.4 bits (67), Expect = 1.9
Identities = 22/49 (44%), Positives = 23/49 (46%), Gaps = 8/49 (16%)
Query: 4 GWAQGSRRAARLPEGGRLMAPASRLLALWALAAVALPGSGAEGDGGWRP 52
GWA GSRR AR PAS L A A AA +PG G G P
Sbjct: 96 GWAPGSRRGAR-------SLPASPLGA-QARAAACVPGKGGAASRGDTP 136
>gi|59806357 submaxillary gland androgen regulated protein 3
homolog A precursor [Homo sapiens]
Length = 134
Score = 30.0 bits (66), Expect = 2.4
Identities = 14/28 (50%), Positives = 15/28 (53%)
Query: 28 LLALWALAAVALPGSGAEGDGGWRPGGP 55
+L LWALAA PG G G P GP
Sbjct: 7 ILGLWALAACFTPGESQRGPRGPYPPGP 34
>gi|5729962 submaxillary gland androgen regulated protein 3
homolog B [Homo sapiens]
Length = 79
Score = 30.0 bits (66), Expect = 2.4
Identities = 14/28 (50%), Positives = 15/28 (53%)
Query: 28 LLALWALAAVALPGSGAEGDGGWRPGGP 55
+L LWALAA PG G G P GP
Sbjct: 7 ILGLWALAACFTPGESQRGPRGPYPPGP 34
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 29.3 bits (64), Expect = 4.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 23 APASRLLALWALAAVALPGSGAEGDGGWRPGGPGAVAEEERCT 65
AP S A A AA A + A GG P GP ++C+
Sbjct: 112 APPSAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCS 154
>gi|150170710 hypothetical protein LOC728118 [Homo sapiens]
Length = 878
Score = 29.3 bits (64), Expect = 4.1
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 4 GWAQGSRRAARLPEGGRLMAPASRLLALWALAAVALPGSGAEGDGGWRPGGPGAVAEEER 63
G AQGS LP L+ +LL W L +P SG W P G ER
Sbjct: 747 GLAQGSSEEEELPSLAFLLGSQHKLLPWW-LPQSPVPASGLLSPEKWGPQGTHQFPSAER 805
>gi|239758167 PREDICTED: hypothetical protein XP_002346321 [Homo
sapiens]
Length = 271
Score = 28.9 bits (63), Expect = 5.4
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 2 AGGWAQGSRRA-ARLPEGGRLMAPASRLLALWALAAVALP-GSGAEGDG 48
AGG SRR AR GR A W +A +ALP GSG+ G+G
Sbjct: 13 AGGRRLTSRRENARAQPRGRAEEDKLGSAAAWKVAELALPGGSGSRGEG 61
>gi|239744140 PREDICTED: hypothetical protein [Homo sapiens]
Length = 878
Score = 28.9 bits (63), Expect = 5.4
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 4 GWAQGSRRAARLPEGGRLMAPASRLLALWALAAVALPGSGAEGDGGWRPGGPGAVAEEER 63
G AQGS LP L+ +LL W L +P SG W P G ER
Sbjct: 747 GLAQGSSEEEELPSLAFLLGSQHKLLPWW-LPQSPVPASGLLSPEKWGPQGTHQSPSAER 805
>gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 878
Score = 28.9 bits (63), Expect = 5.4
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 4 GWAQGSRRAARLPEGGRLMAPASRLLALWALAAVALPGSGAEGDGGWRPGGPGAVAEEER 63
G AQGS LP L+ +LL W L +P SG W P G ER
Sbjct: 747 GLAQGSSEEEELPSLAFLLGSQHKLLPWW-LPQSPVPASGLLSPEKWGPQGTHQSPSAER 805
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.139 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,406,015
Number of Sequences: 37866
Number of extensions: 719225
Number of successful extensions: 2122
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 2078
Number of HSP's gapped (non-prelim): 63
length of query: 285
length of database: 18,247,518
effective HSP length: 101
effective length of query: 184
effective length of database: 14,423,052
effective search space: 2653841568
effective search space used: 2653841568
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.