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Search of human proteins with 134304844
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|134304844 hepatic nuclear factor-1-alpha [Homo sapiens]
(631 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|134304844 hepatic nuclear factor-1-alpha [Homo sapiens] 1256 0.0
gi|4507397 transcription factor 2 [Homo sapiens] 545 e-155
gi|209180434 homeobox containing 1 [Homo sapiens] 75 2e-13
gi|47059040 homeobox containing 1 [Homo sapiens] 75 2e-13
gi|151301154 mucin 6, gastric [Homo sapiens] 64 3e-10
gi|183396804 Regulation of nuclear pre-mRNA domain containing 2 ... 60 6e-09
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 55 1e-07
gi|116284392 mucin 2 precursor [Homo sapiens] 55 2e-07
gi|167736355 mucin 4 isoform a [Homo sapiens] 55 2e-07
gi|239754668 PREDICTED: mucin 12 [Homo sapiens] 54 3e-07
gi|55750053 atrophin-1 [Homo sapiens] 53 7e-07
gi|55750041 atrophin-1 [Homo sapiens] 53 7e-07
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 52 1e-06
gi|19923597 Sin3A-associated protein, 130kDa isoform b [Homo sap... 52 1e-06
gi|225579127 Sin3A-associated protein, 130kDa isoform a [Homo sa... 52 1e-06
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 52 2e-06
gi|112421108 capicua homolog [Homo sapiens] 52 2e-06
gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens] 52 2e-06
gi|239752490 PREDICTED: similar to Mucin-12 [Homo sapiens] 50 5e-06
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 50 5e-06
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 50 5e-06
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 50 5e-06
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 50 8e-06
gi|188536004 zinc finger protein 469 [Homo sapiens] 50 8e-06
gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens] 49 1e-05
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 49 1e-05
gi|239758148 PREDICTED: similar to mucin 11 [Homo sapiens] 48 2e-05
gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens] 48 3e-05
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 47 4e-05
gi|239757995 PREDICTED: similar to hCG1747327, partial [Homo sap... 47 4e-05
>gi|134304844 hepatic nuclear factor-1-alpha [Homo sapiens]
Length = 631
Score = 1256 bits (3251), Expect = 0.0
Identities = 631/631 (100%), Positives = 631/631 (100%)
Query: 1 MVSKLSQLQTELLAALLESGLSKEALIQALGEPGPYLLAGEGPLDKGESCGGGRGELAEL 60
MVSKLSQLQTELLAALLESGLSKEALIQALGEPGPYLLAGEGPLDKGESCGGGRGELAEL
Sbjct: 1 MVSKLSQLQTELLAALLESGLSKEALIQALGEPGPYLLAGEGPLDKGESCGGGRGELAEL 60
Query: 61 PNGLGETRGSEDETDDDGEDFTPPILKELENLSPEEAAHQKAVVETLLQEDPWRVAKMVK 120
PNGLGETRGSEDETDDDGEDFTPPILKELENLSPEEAAHQKAVVETLLQEDPWRVAKMVK
Sbjct: 61 PNGLGETRGSEDETDDDGEDFTPPILKELENLSPEEAAHQKAVVETLLQEDPWRVAKMVK 120
Query: 121 SYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQQFTHA 180
SYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQQFTHA
Sbjct: 121 SYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQQFTHA 180
Query: 181 GQGGLIEEPTGDELPTKKGRRNRFKWGPASQQILFQAYERQKNPSKEERETLVEECNRAE 240
GQGGLIEEPTGDELPTKKGRRNRFKWGPASQQILFQAYERQKNPSKEERETLVEECNRAE
Sbjct: 181 GQGGLIEEPTGDELPTKKGRRNRFKWGPASQQILFQAYERQKNPSKEERETLVEECNRAE 240
Query: 241 CIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDTYSGPPPGPGPGPALP 300
CIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDTYSGPPPGPGPGPALP
Sbjct: 241 CIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDTYSGPPPGPGPGPALP 300
Query: 301 AHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPLHQVSPTGLEPSH 360
AHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPLHQVSPTGLEPSH
Sbjct: 301 AHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPLHQVSPTGLEPSH 360
Query: 361 SLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPA 420
SLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPA
Sbjct: 361 SLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPA 420
Query: 421 SLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPV 480
SLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPV
Sbjct: 421 SLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPV 480
Query: 481 QSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTK 540
QSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTK
Sbjct: 481 QSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTK 540
Query: 541 QVFTSDTEASSESGLHTPASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSSLVLYQS 600
QVFTSDTEASSESGLHTPASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSSLVLYQS
Sbjct: 541 QVFTSDTEASSESGLHTPASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSSLVLYQS 600
Query: 601 SDSSNGQSHLLPSNHSVIETFISTQMASSSQ 631
SDSSNGQSHLLPSNHSVIETFISTQMASSSQ
Sbjct: 601 SDSSNGQSHLLPSNHSVIETFISTQMASSSQ 631
>gi|4507397 transcription factor 2 [Homo sapiens]
Length = 557
Score = 545 bits (1405), Expect = e-155
Identities = 313/577 (54%), Positives = 378/577 (65%), Gaps = 62/577 (10%)
Query: 1 MVSKLSQLQTELLAALLESGLSKEALIQALGEPGPYLLAGEG----PLDKGESCGGGRGE 56
MVSKL+ LQ ELL+ALL SG++KE L+QAL E P G PL G
Sbjct: 1 MVSKLTSLQQELLSALLSSGVTKEVLVQALEELLPSPNFGVKLETLPLSPGSGAEPDTKP 60
Query: 57 LAE-LPNGLGETRGSEDETDDDGEDF-TPPILKELENLSPEEAAHQKAVVETLLQEDPWR 114
+ L NG + R S DE +DG+D+ TPPILKEL+ L+ EEAA Q+A V+ +L EDPWR
Sbjct: 61 VFHTLTNGHAKGRLSGDEGSEDGDDYDTPPILKELQALNTEEAAEQRAEVDRMLSEDPWR 120
Query: 115 VAKMVKSYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVA 174
AKM+K Y+QQHNIPQREVVD TGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQRE+
Sbjct: 121 AAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREIL 180
Query: 175 QQFTHAGQ--GGLIEEPTGDEL-----------------------PT-KKGRRNRFKWGP 208
+QF Q G + ++ + D+L PT KK RRNRFKWGP
Sbjct: 181 RQFNQTVQSSGNMTDKSSQDQLLFLFPEFSQQSHGPGQSDDACSEPTNKKMRRNRFKWGP 240
Query: 209 ASQQILFQAYERQKNPSKEERETLVEECNRAECIQRGVSPSQAQGLGSNLVTEVRVYNWF 268
ASQQIL+QAY+RQKNPSKEERE LVEECNRAEC+QRGVSPS+A GLGSNLVTEVRVYNWF
Sbjct: 241 ASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWF 300
Query: 269 ANRRKEEAFRHKLAMDTYSGPPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATS 328
ANRRKEEAFR KLAMD YS P L +H SP P + P+K+ GVRY Q +
Sbjct: 301 ANRRKEEAFRQKLAMDAYSSNQT-HSLNPLL-SHGSPHHQPSSSPPNKLSGVRYSQQGNN 358
Query: 329 E---TAEVPSSSGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTA 385
E ++ + +VT + L QVSP L+P H+LLS + K++S +GG LPPVSTLT
Sbjct: 359 EITSSSTISHHGNSAMVTSQSVLQQVSPASLDPGHNLLSPDGKMISVSGGGLPPVSTLTN 418
Query: 386 LHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQS 445
+HSL +P QQ QNLIM L GVM I L ++QAQS
Sbjct: 419 IHSLSHHNP---QQSQNLIMTPLSGVMAIAQ--------------------SLNTSQAQS 455
Query: 446 VPVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQ-SHVTQSPFMATMAQLQSPHALYS 504
VPVINS+ SL LQPVQFSQ LH +QQPLM SH+ Q PFMA + QLQ+ H +Y+
Sbjct: 456 VPVINSVAGSLAALQPVQFSQQLHSPHQQPLMQQSPGSHMAQQPFMAAVTQLQNSH-MYA 514
Query: 505 HKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQ 541
HK E QY+HT P M++TDT+++S L +++ +KQ
Sbjct: 515 HKQEPPQYSHTSRFPSAMVVTDTSSISTLTNMSSSKQ 551
>gi|209180434 homeobox containing 1 [Homo sapiens]
Length = 420
Score = 75.1 bits (183), Expect = 2e-13
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 104 VETLLQEDPWRVAKMVKSYLQQHNIPQREVVDTTGLNQSHLSQHL-NKGTPMKTQKRAAL 162
VE L++ D + + +K++L I Q V TG++QS +S L +G+ + QK+ A
Sbjct: 162 VEELMRRDSSVIKEEIKAFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAF 221
Query: 163 YTWYVRKQREVAQQFTHAGQGGLIEEPTGDELPT---------KKGRRNRFKWGPASQQI 213
Y WY ++ + IE+P + P + R +RF W +
Sbjct: 222 YRWYQLEKTNPGATLSMRPAPIPIEDPEWRQTPPPVSATSGTFRLRRGSRFTWRKECLAV 281
Query: 214 LFQAYERQKNPSKEERETLVEECNRAECIQR-GVSPSQAQGLGSNLVTEVRVYNWFANRR 272
+ + + P + +RE + CN IQ+ G S + VT ++VYNWFANRR
Sbjct: 282 MESYFNENQYPDEAKREEIANACNAV--IQKPGKKLSDLER-----VTSLKVYNWFANRR 334
Query: 273 KE 274
KE
Sbjct: 335 KE 336
>gi|47059040 homeobox containing 1 [Homo sapiens]
Length = 420
Score = 75.1 bits (183), Expect = 2e-13
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 104 VETLLQEDPWRVAKMVKSYLQQHNIPQREVVDTTGLNQSHLSQHL-NKGTPMKTQKRAAL 162
VE L++ D + + +K++L I Q V TG++QS +S L +G+ + QK+ A
Sbjct: 162 VEELMRRDSSVIKEEIKAFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAF 221
Query: 163 YTWYVRKQREVAQQFTHAGQGGLIEEPTGDELPT---------KKGRRNRFKWGPASQQI 213
Y WY ++ + IE+P + P + R +RF W +
Sbjct: 222 YRWYQLEKTNPGATLSMRPAPIPIEDPEWRQTPPPVSATSGTFRLRRGSRFTWRKECLAV 281
Query: 214 LFQAYERQKNPSKEERETLVEECNRAECIQR-GVSPSQAQGLGSNLVTEVRVYNWFANRR 272
+ + + P + +RE + CN IQ+ G S + VT ++VYNWFANRR
Sbjct: 282 MESYFNENQYPDEAKREEIANACNAV--IQKPGKKLSDLER-----VTSLKVYNWFANRR 334
Query: 273 KE 274
KE
Sbjct: 335 KE 336
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 64.3 bits (155), Expect = 3e-10
Identities = 95/395 (24%), Positives = 159/395 (40%), Gaps = 65/395 (16%)
Query: 300 PAHSSPGLPPPALSPSKVHGVRYGQPATSE---TAEVPSSSGGPLVTVS--------TPL 348
P H+S G P + R P T+ T P SS GP+ S TP
Sbjct: 1771 PNHTSTGTRTPVAHTTSATSSRLPTPFTTHSPPTGTTPISSTGPVTATSFQTTTTYPTPS 1830
Query: 349 HQ---------------VSP---TGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHS-- 388
H V+P T + P+H+ ++T A + S G +PP +T+ A S
Sbjct: 1831 HPHTTLPTHVPSFSTSLVTPSTHTVIIPTHTQMATSASIHSMPTGTIPPPTTIKATGSTH 1890
Query: 389 ----LEQTSPGLNQQPQNLIMA----SLPGVMT------IGPGEPASLGPTFTNTGASTL 434
+ T+ G +Q P + A SLP + + P ++ P T+TG T
Sbjct: 1891 TAPPMTPTTSGTSQSPSSFSTAKTSTSLPYHTSSTHHPEVTPTSTTNITPKHTSTGTRTP 1950
Query: 435 VIGLASTQAQSVPVINSMGSSLTTLQPVQFSQPL-HPSYQQPLMPPVQSHVTQS------ 487
V S + +P + S T P + P+ S+Q P SH +
Sbjct: 1951 VAHTTSASSSRLPTPFTTHSPPTGSSPFSSTGPMTATSFQTTTTYPTPSHPQTTLPTHVP 2010
Query: 488 PFMATMAQLQSPHALYSHKPEVA-----QYTHTGLL--PQTMLITDTTNLSALASLTP-- 538
PF ++ + + + ++A T TG + P T+ T +T+ + ++T
Sbjct: 2011 PFSTSLVTPSTHTVIITTHTQMATSASIHSTPTGTVPPPTTLKATGSTHTAPPMTVTTSG 2070
Query: 539 TKQVFTSDTEASSESGLHTPASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSSLVLY 598
T Q +S + A++ S + +S + S+ P+S Q H SA+ VS+++ +
Sbjct: 2071 TSQTHSSFSTATASSSFISSSSWLPQ-NSSSRPPSSPITTQLPHLSSATTPVSTTNQLSS 2129
Query: 599 QSSDSSNGQSHL---LPSNHSVIETFISTQMASSS 630
S S + S + +PS+HS +T + SSS
Sbjct: 2130 SFSPSPSAPSTVSSYVPSSHSSPQTSSPSVGTSSS 2164
Score = 55.5 bits (132), Expect = 1e-07
Identities = 95/402 (23%), Positives = 147/402 (36%), Gaps = 79/402 (19%)
Query: 287 SGPPPGPGP--GPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPL--- 341
+GP P P GP P P P + Y P T T P ++G P+
Sbjct: 1360 TGPRPTPASTTGPTTPQPGQPTRPTATETTQTRTTTEYTTPQTPHTTHSPPTAGSPVPST 1419
Query: 342 -----------VTVSTPLHQ---------------VSP---TGLEPSHSLLSTEAKLVSA 372
T TP H V+P T + P+H+ ++T A SA
Sbjct: 1420 GPVTATSFHATTTYPTPSHPETTLPTHVPPFSTSLVTPSTHTVITPTHAQMATSASNHSA 1479
Query: 373 AGGPLPPVSTLTALHS------LEQTSPGLNQQPQNLIMASLPGVMTIGPGEPASLGPTF 426
G +PP +TL A S + T+ G +Q + P ++ ++ P
Sbjct: 1480 PTGTIPPPTTLKATGSTHTAPPITPTTSGTSQAHSSFSTNKTP--TSLHSHTSSTHHPEV 1537
Query: 427 TNTGASTLVIGLASTQAQS-VPVINSMGSS-----LTTLQPVQFSQPLH-------PSYQ 473
T T +T+ ST+ ++ V NS SS TT P S P S++
Sbjct: 1538 TPTSTTTITPNPTSTRTRTPVAHTNSATSSRPPPPFTTHSPPTGSSPFSSTGPMTATSFK 1597
Query: 474 QPLMPPVQSH-----VTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLL---------- 518
P SH T P +T S H + + P AQ + +
Sbjct: 1598 TTTTYPTPSHPQTTLPTHVPPFSTSLVTPSTHTVIT--PTHAQMATSASIHSMPTGTIPP 1655
Query: 519 PQTMLITDTTNLSALASLTP--TKQVFTSDTEASSESGLHTPASQATTLHVPSQDPASIQ 576
P T+ T +T+ + +LT T Q +S A + + LH S ++ H S
Sbjct: 1656 PTTLKATGSTHTAPTMTLTTSGTSQALSSLNTAKTSTSLH---SHTSSTHHAEATSTSTT 1712
Query: 577 HLQPAHRLSASP--TVSSSSLVLYQSSDSSNGQSHLLPSNHS 616
++ P + +P TV++S +SS S+ S L S+ S
Sbjct: 1713 NITPNPTSTGTPPMTVTTSGTSQSRSSFSTAKTSTSLHSHTS 1754
Score = 48.1 bits (113), Expect = 2e-05
Identities = 101/416 (24%), Positives = 142/416 (34%), Gaps = 76/416 (18%)
Query: 234 EECNRAECIQRGVSPSQAQGL-GSNLVTEVRVYNWFANRRKEEAFRHKLAMDTYSGPPPG 292
+E N Q + PSQ Q + GSN+ N ++E F H+ + PP
Sbjct: 1149 QEANCTWHYQPCLCPSQPQSVPGSNI-------EGCYNCSQDEYFDHEEGVCVPCMPPTT 1201
Query: 293 PGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPL---- 348
P P P P + G P + P G S T PSS+ P TPL
Sbjct: 1202 PQP-PTTPQLPTTGSRPTQVWPMTGTSTTIG--LLSSTGPSPSSNHTPASPTQTPLLPAT 1258
Query: 349 -----------------HQVSP---TGLEPSHSLLSTEAK------LVSAAGGPLPPVST 382
V+P +GL P+ +L ST K A P +T
Sbjct: 1259 LTSSKPTASSGEPPRPTTAVTPQATSGLPPTATLRSTATKPTVTQATTRATASTASPATT 1318
Query: 383 LTALHSLEQT-------SPGLNQQPQNLIMASLPG---VMTIGP-GEPAS-LGPTFTNTG 430
TA + T + G + LPG T GP PAS GPT G
Sbjct: 1319 STAQSTTRTTMTLPTPATSGTSPTLPKSTNQELPGTTATQTTGPRPTPASTTGPTTPQPG 1378
Query: 431 ASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFM 490
T +TQ ++ + + TT P P+ P VT + F
Sbjct: 1379 QPTRPTATETTQTRTTTEYTTPQTPHTTHSPPTAGSPV----------PSTGPVTATSFH 1428
Query: 491 ATMAQLQSPH---ALYSHKPE-----VAQYTHTGLLP-QTMLITDTTNLSALASLTP--- 538
AT H L +H P V THT + P + T +N SA P
Sbjct: 1429 ATTTYPTPSHPETTLPTHVPPFSTSLVTPSTHTVITPTHAQMATSASNHSAPTGTIPPPT 1488
Query: 539 TKQVFTSDTEASSESGLHTPASQATTLHVPSQDPASI-QHLQPAHRLSASPTVSSS 593
T + S A + + SQA + ++ P S+ H H +PT +++
Sbjct: 1489 TLKATGSTHTAPPITPTTSGTSQAHSSFSTNKTPTSLHSHTSSTHHPEVTPTSTTT 1544
Score = 42.7 bits (99), Expect = 0.001
Identities = 74/316 (23%), Positives = 107/316 (33%), Gaps = 58/316 (18%)
Query: 287 SGPPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVST 346
SG PP P A+ ++ GLPP A S Q T TA S + T ST
Sbjct: 1268 SGEPPRPTT--AVTPQATSGLPPTATLRSTATKPTVTQATTRATASTASPA-----TTST 1320
Query: 347 PLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMA 406
T P+ + T L + LP + + + T P A
Sbjct: 1321 AQSTTRTTMTLPTPATSGTSPTLPKSTNQELPGTT------ATQTTGP-------RPTPA 1367
Query: 407 SLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQA-QSVPVINSMGSSLTTLQPV--- 462
S G T PG+P PT T T + + Q + + GS + + PV
Sbjct: 1368 STTGPTTPQPGQPTR--PTATETTQTRTTTEYTTPQTPHTTHSPPTAGSPVPSTGPVTAT 1425
Query: 463 ------QFSQPLHPSYQQPL-MPPV-------QSHVTQSPFMATMAQLQSPHALYSHKPE 508
+ P HP P +PP +H +P A MA S H+
Sbjct: 1426 SFHATTTYPTPSHPETTLPTHVPPFSTSLVTPSTHTVITPTHAQMATSASNHS------- 1478
Query: 509 VAQYTHTGLLPQTMLITDTTNLSALASLTP----TKQVFTSDTEASSESGLHTPASQATT 564
TG +P + T + +TP T Q +S + + + LH S ++
Sbjct: 1479 ----APTGTIPPPTTLKATGSTHTAPPITPTTSGTSQAHSSFSTNKTPTSLH---SHTSS 1531
Query: 565 LHVPSQDPASIQHLQP 580
H P P S + P
Sbjct: 1532 THHPEVTPTSTTTITP 1547
Score = 37.7 bits (86), Expect = 0.032
Identities = 51/183 (27%), Positives = 71/183 (38%), Gaps = 15/183 (8%)
Query: 313 SPSKVHGVRYGQPATSETAEVPSSSGGPLVT-VSTPLHQVSPTGLEPSHSLLSTEAKLVS 371
SPS V P++ + + S S G + VS P+H S T SHS LST S
Sbjct: 2134 SPSAPSTVSSYVPSSHSSPQTSSPSVGTSSSFVSAPVH--STTLSSGSHSSLSTHPTTAS 2191
Query: 372 AAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPASLG------PT 425
+ PL P S+ A ++ T P P L +T+ P + L P+
Sbjct: 2192 VSASPLFP-SSPAASTTIRATLPHTISSPFTLSALLPISTVTVSPTPSSHLASSTIAFPS 2250
Query: 426 FTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVT 485
T AST S+Q+ + S +SLTT P L PV + T
Sbjct: 2251 TPRTTASTHTAPAFSSQSTT-----SRSTSLTTRVPTSGFVSLTSGVTGIPTSPVTNLTT 2305
Query: 486 QSP 488
+ P
Sbjct: 2306 RHP 2308
Score = 33.5 bits (75), Expect = 0.61
Identities = 71/322 (22%), Positives = 112/322 (34%), Gaps = 49/322 (15%)
Query: 302 HSSPGLPPPALSPSKVHGVRYGQP----ATSETAEVPSS-----SGGPLVTVSTPLHQVS 352
HS+P P + K G + P TS T++ SS + ++ S+ L Q S
Sbjct: 2039 HSTPTGTVPPPTTLKATGSTHTAPPMTVTTSGTSQTHSSFSTATASSSFISSSSWLPQNS 2098
Query: 353 PTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVM 412
+ P S ++T+ +S+A PVST L S SP + + +S
Sbjct: 2099 SS--RPPSSPITTQLPHLSSA---TTPVSTTNQLSSSFSPSPSAPSTVSSYVPSSHSSPQ 2153
Query: 413 TIGPGEPASLGPTFTNTGASTLVIGLAST--------QAQSVPVINSMGSSLTTLQ---P 461
T P S ++TL G S+ + P+ S ++ TT++ P
Sbjct: 2154 TSSPSVGTSSSFVSAPVHSTTLSSGSHSSLSTHPTTASVSASPLFPSSPAASTTIRATLP 2213
Query: 462 VQFSQPLHPSYQQPLM-----PPVQSHVTQSP--FMATMAQLQSPHALYSHKPEVAQYTH 514
S P S P+ P SH+ S F +T S H + +
Sbjct: 2214 HTISSPFTLSALLPISTVTVSPTPSSHLASSTIAFPSTPRTTASTHTAPAFSSQSTTSRS 2273
Query: 515 TGLLPQ-----------------TMLITDTTNLSALASLTPTKQVFTSDTEASSESGLHT 557
T L + T +T+ T +L+PT + TS A +
Sbjct: 2274 TSLTTRVPTSGFVSLTSGVTGIPTSPVTNLTTRHPGPTLSPTTRFLTSSLTAHGSTPASA 2333
Query: 558 PASQATTLHVPSQDPASIQHLQ 579
P S T S S++ Q
Sbjct: 2334 PVSSLGTPTPTSPGVCSVREQQ 2355
>gi|183396804 Regulation of nuclear pre-mRNA domain containing 2
[Homo sapiens]
Length = 1461
Score = 60.1 bits (144), Expect = 6e-09
Identities = 134/550 (24%), Positives = 217/550 (39%), Gaps = 65/550 (11%)
Query: 94 PEEAAHQKAVVETLLQEDPWRVAKMVKSYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTP 153
PE AA K + E +++ + Y ++ + RE + TT Q L ++LNK P
Sbjct: 105 PEAAALVKDPSVSKSVERIFKIWEDRNVYPEEMIVALREALSTTFKTQKQLKENLNK-QP 163
Query: 154 MKTQKRAALYT--WYVRKQREVAQQFTHAGQGGLIEE-----PTGDELPTKKGRRNRFKW 206
K K++ T K + VA+ + A LIEE + D++ K+ + + +
Sbjct: 164 NKQWKKSQTSTNPKAALKSKIVAEFRSQA----LIEELLLYKRSEDQIELKEKQLSTMRV 219
Query: 207 GPASQQILFQAYERQ--KNPSKE--ERETLVEECNRAECIQRGVSPSQAQGLGSNLV--- 259
S + L ++ K SKE E + +EE Q PS + L + +
Sbjct: 220 DVCSTETLKCLKDKTGGKKFSKEFEEASSKLEEFVNGLDKQVKNGPSLTEALENAGIFYE 279
Query: 260 ---TEVRV----YNWFANRRKEEAFRHKLAMDTYSGPPPGPGPGPALPAHSSPGLPPPAL 312
EV+V Y FANR + T P P P P++ A P P
Sbjct: 280 AQYKEVKVVANAYKTFANRVNNLKKKLDQLKSTLPDPEESPVPSPSMDA------PSPTG 333
Query: 313 SPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSA 372
S S G+ G+ + S T E S+ VT + + + + +E S + E +
Sbjct: 334 SESPFQGMG-GEESQSPTMESEKSATPEPVTDNRDVEDMELSDVEDDGSKIIVEDRKEKP 392
Query: 373 AGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGAS 432
A VST E S + P +P MT P P + + + + A
Sbjct: 393 A--EKSAVSTSVPTKPTENISKASSCTP-------VPVTMTATPPLPKPVNTSLSPSPA- 442
Query: 433 TLVIGLASTQAQSVPVINSMGSSLTT-LQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMA 491
+ L + + I+S+ SSLT+ ++ S PS P P + ++P A
Sbjct: 443 ---LALPNLANVDLAKISSILSSLTSVMKNTGVSPASRPSPGTPTSPSNLTSGLKTPAPA 499
Query: 492 TMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLI----TDTTNLSALASLTPTKQVFTSD- 546
T SH P + + P+++L T T + AL L+ Q T +
Sbjct: 500 TTT---------SHNPLANILSKVEITPESILSALSKTQTQSAPALQGLSSLLQSVTGNP 550
Query: 547 ---TEASSESGLHTPASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSSLVLYQSSDS 603
+EA+S+S +PA+ + P+S Q P + SP S+S + +S +
Sbjct: 551 VPASEAASQSTSASPANTTVSTIKGRNLPSSAQPFIPKS-FNYSPNSSTSEVSSTSASKA 609
Query: 604 SNGQSHLLPS 613
S GQS LPS
Sbjct: 610 SIGQSPGLPS 619
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 55.5 bits (132), Expect = 1e-07
Identities = 78/310 (25%), Positives = 119/310 (38%), Gaps = 17/310 (5%)
Query: 290 PPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPLH 349
P PGP P+ +SP L + + Q P+SS P + ST
Sbjct: 1485 PAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLN-STVAP 1543
Query: 350 QVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLP 409
SP L P+ +L S +A P P ++L A S + P + A
Sbjct: 1544 ACSPV-LVPASALASP----FPSAPNPAPAQASLLAPASSASQALATPLAP---MAAPQT 1595
Query: 410 GVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQP-L 468
++ P P + P + + V+ + T + ++ G+SL + PV P L
Sbjct: 1596 AILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVL 1655
Query: 469 HPSYQQPLMP-PVQSHVTQSPFMATMAQLQS-PHALYSHKPEVAQYTHTGLLPQTMLITD 526
PS Q ++P PV S + T+A + L P TG PQ T
Sbjct: 1656 APSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGN-PQGPFPTQ 1714
Query: 527 TTNLSALASLTPTKQVFTSDTEASSESGLHTPASQATTLHVPSQDPASIQHLQPAHRLSA 586
T +L+ +SL PT + T + + P + P PAS PAH L+
Sbjct: 1715 TLSLTPASSLVPTP----AQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTL 1770
Query: 587 SPTVSSSSLV 596
+P SS+SL+
Sbjct: 1771 APASSSASLL 1780
Score = 51.2 bits (121), Expect = 3e-06
Identities = 91/334 (27%), Positives = 126/334 (37%), Gaps = 60/334 (17%)
Query: 293 PGPGP---ALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPL-------- 341
PG P + P H LP PA SP + S T VP SS P+
Sbjct: 1390 PGAAPLTISSPLHVPSSLPGPASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTLPA 1449
Query: 342 -------VTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSP 394
+ +S PL VS +G S+ A +V AA GP P ++ A S +
Sbjct: 1450 PASAPLTIPISAPL-TVSASGPALLTSVTPPLAPVVPAAPGP-PSLAPSGASPSASALTL 1507
Query: 395 GLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGS 454
GL P SL T PG P L PT S+ V GL ST A + + S
Sbjct: 1508 GLATAP------SLSSSQT--PGHPLLLAPT------SSHVPGLNSTVAPACSPVLVPAS 1553
Query: 455 SLTTLQPVQFSQPLHPSYQQPLMPPVQ--SHVTQSPFMATMAQLQ------------SPH 500
+L + P S P Q L+ P S +P +A MA Q +P
Sbjct: 1554 ALASPFP---SAPNPAPAQASLLAPASSASQALATP-LAPMAAPQTAILAPSPAPPLAPL 1609
Query: 501 ALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDTEASSESGLHTPAS 560
+ + P A + P ++ +T ++LAS +P +S+++ L P
Sbjct: 1610 PVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVP 1669
Query: 561 QATTLHVPSQDPASIQHLQPAHRLSASPTVSSSS 594
P PAS Q L A L +PT+ SS
Sbjct: 1670 S------PLPSPASTQTLALAPAL--APTLGGSS 1695
Score = 46.2 bits (108), Expect = 9e-05
Identities = 70/299 (23%), Positives = 112/299 (37%), Gaps = 52/299 (17%)
Query: 282 AMDTYSGPPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPL 341
A+ T P P P+ + P P P L+PS T PSS+ G
Sbjct: 1582 ALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTS 1641
Query: 342 VTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQ 401
+ ++P+ +P L PS ST+ L + PLP ++ L +P L
Sbjct: 1642 LASASPVPAPTPV-LAPS----STQTMLPAPVPSPLPSPASTQTLALAPALAPTLGG--- 1693
Query: 402 NLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQP 461
+S +++G G P GP T T + T L T AQ++ SL P
Sbjct: 1694 ----SSPSQTLSLGTGNPQ--GPFPTQTLSLTPASSLVPTPAQTL--------SLAPGPP 1739
Query: 462 VQFSQPLHPSYQQPLMP-----PVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTG 516
+ +Q L + PL P P +H ++ A L +P ++
Sbjct: 1740 LGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASV-------------- 1785
Query: 517 LLPQTMLITDTTNLSALASLTPTKQVFTSDTEASSESGLHTPASQATTLHVPSQDPASI 575
QT+ ++ PT + T A + + +PASQA++L V + A +
Sbjct: 1786 ---QTLTLSPAP--------VPTLGPAAAQTLALAPASTQSPASQASSLVVSASGAAPL 1833
Score = 41.6 bits (96), Expect = 0.002
Identities = 90/348 (25%), Positives = 126/348 (36%), Gaps = 69/348 (19%)
Query: 288 GPPP-GPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVST 346
GP P P PGP L A +PG P L PA+ + P +G PL+ S
Sbjct: 1020 GPVPVRPPPGPELSAQPTPGPVPQVL------------PASLMVSASP--AGPPLIPASR 1065
Query: 347 PLHQVSPTGLEPSHSLLS--TEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLI 404
P V L+P+ L + L +G PP TL SL+ T P P L
Sbjct: 1066 PPGPVLLPPLQPNSGSLPQVLPSPLGVLSGTSRPPTPTL----SLKPTPPA----PVRLS 1117
Query: 405 MASLPG------VMTIGPG---EPASLGPTFTNTGASTLVIGLASTQA-QSVPVINSMGS 454
A PG +T+ PG PA+ T T T +T A T A Q + + M +
Sbjct: 1118 PAPPPGSSSLLKPLTVPPGYTFPPAAATTTSTTTATATTTAVPAPTPAPQRLILSPDMQA 1177
Query: 455 SLTTLQPVQFSQPLHPSYQQPL-----MPPVQSHVTQSPFMATMAQLQ-----SPHALYS 504
L + + V Q L Q+P+ P+ + + T AQ++ P L
Sbjct: 1178 RLPSGEVVSIGQ-LASLAQRPVANAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQR 1236
Query: 505 HKPE----------VAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDTEASSESG 554
+ ++Q H L+ T +S L S TP S T A +
Sbjct: 1237 NVVHLVSAGGQHHLISQPAHVALIQAVAPTPGPTPVSVLPSSTP------STTPAPTGLS 1290
Query: 555 LHTPASQATTLHVPSQDPASI-------QHLQPAHRLSASPTVSSSSL 595
L A+Q V + I L P L+ +P SS L
Sbjct: 1291 LPLAANQVPPTMVNNTGVVKIVVRQAPRDGLTPVPPLAPAPRPPSSGL 1338
Score = 37.0 bits (84), Expect = 0.055
Identities = 99/400 (24%), Positives = 134/400 (33%), Gaps = 99/400 (24%)
Query: 287 SGPPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVST 346
S P GP P +PA PG P L P + + Q S + +S P T+S
Sbjct: 1052 SASPAGP---PLIPASRPPG--PVLLPPLQPNSGSLPQVLPSPLGVLSGTSRPPTPTLSL 1106
Query: 347 PLHQVSPTGLEP-----SHSLLSTEAKLVSAAGGPLPPVS-TLTALHSLEQTS---PGLN 397
+P L P S SLL L G PP + T T+ + T+ P
Sbjct: 1107 KPTPPAPVRLSPAPPPGSSSLLKP---LTVPPGYTFPPAAATTTSTTTATATTTAVPAPT 1163
Query: 398 QQPQNLIM-----ASLPGVMTIGPGEPASL-------------------GPTFTNTGAST 433
PQ LI+ A LP + G+ ASL G T TGA
Sbjct: 1164 PAPQRLILSPDMQARLPSGEVVSIGQLASLAQRPVANAGGSKPLTFQIQGNKLTLTGAQV 1223
Query: 434 --LVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLMP-----PVQSHVTQ 486
L +G ++V + S G Q SQP H + Q + P PV +
Sbjct: 1224 RQLAVGQPRPLQRNVVHLVSAGG-----QHHLISQPAHVALIQAVAPTPGPTPVSVLPSS 1278
Query: 487 SP--------FMATMAQLQSPHALYSH----KPEVAQYTHTGLLPQTMLI---------- 524
+P +A Q P + ++ K V Q GL P L
Sbjct: 1279 TPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKIVVRQAPRDGLTPVPPLAPAPRPPSSGL 1338
Query: 525 ----------------TDTTNLSALASLTPT------KQVFTSDTEASSESGLHTPASQA 562
T T + TPT K V + E S+ + P + +
Sbjct: 1339 PAVLNPRPTLTPGRLPTPTLGTARAPMPTPTLVRPLLKLVHSPSPEVSASAPGAAPLTIS 1398
Query: 563 TTLHVPSQDPASIQHLQPAHRLS--ASPTVSSSSLVLYQS 600
+ LHVPS P P S ASP S+ S+ L S
Sbjct: 1399 SPLHVPSSLPGPASSPMPIPNSSPLASPVSSTVSVPLSSS 1438
Score = 36.2 bits (82), Expect = 0.094
Identities = 60/229 (26%), Positives = 90/229 (39%), Gaps = 26/229 (11%)
Query: 289 PPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPA-TSETAEVPSSSGGPLVTVSTP 347
P P P LP H P PPP+ P PA T A P + LVT S+P
Sbjct: 2467 PISAPNPITILPVHILPSPPPPSQIPPCSSPACTPPPACTPPPAHTPPPAQTCLVTPSSP 2526
Query: 348 LHQVSPTGLEPSHSL------LSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQ 401
L + P + S S+ L EA+L + A P L ++ S E +S L P+
Sbjct: 2527 L-LLGPPSVPISASVTNLPLGLRPEAELCAQALAS-PESLELASVASSETSSLSL-VPPK 2583
Query: 402 NLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQ- 460
+L LP + I P +L T + + + + Q Q P ++ G++LT L
Sbjct: 2584 DL----LPVAVEILPVSEKNLSLTPSAPSLTLEAGSIPNGQEQEAP-DSAEGTTLTVLPE 2638
Query: 461 ----PVQFSQ------PLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSP 499
P+ S+ P + +PL P+++ T SP
Sbjct: 2639 GEELPLCVSESNGLELPPSAASDEPLQEPLEADRTSEELTEAKTPTSSP 2687
Score = 30.8 bits (68), Expect = 4.0
Identities = 69/312 (22%), Positives = 114/312 (36%), Gaps = 49/312 (15%)
Query: 289 PPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPL 348
P P P P PA + P L P +S A VP S+ P+ + P+
Sbjct: 2439 PAPRPRPTPASAPAAIPALVPVPVS-----------------APVPISAPNPITIL--PV 2479
Query: 349 HQV----SPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLI 404
H + P+ + P S T + PP + T L + +SP L P I
Sbjct: 2480 HILPSPPPPSQIPPCSSPACTPPPACTPPPAHTPPPAQ-TCL--VTPSSPLLLGPPSVPI 2536
Query: 405 MASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQF 464
AS+ + P L P A LAS ++ + + S +S +L P +
Sbjct: 2537 SASVTNL-------PLGLRPE-----AELCAQALASPESLELASVASSETSSLSLVPPKD 2584
Query: 465 SQPLHPSYQQPLMPPVQSHVTQSPF--MATMAQLQSPHALYSHKPEVAQYTHTGLLPQTM 522
P+ ++P + +++ +P T+ P+ P+ A+ T +LP+
Sbjct: 2585 LLPV----AVEILPVSEKNLSLTPSAPSLTLEAGSIPNGQEQEAPDSAEGTTLTVLPEGE 2640
Query: 523 LITDTTNLSALASLTPTKQVFTSDTEASSESGLHTPASQATTLHVPSQDPASIQHLQPAH 582
+ + S L P+ SD + + T P+ P Q L A
Sbjct: 2641 ELPLCVSESNGLELPPSA---ASDEPLQEPLEADRTSEELTEAKTPTSSPEKPQELVTAE 2697
Query: 583 RLSASPTVSSSS 594
A+P+ SSS+
Sbjct: 2698 --VAAPSTSSSA 2707
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 55.1 bits (131), Expect = 2e-07
Identities = 65/298 (21%), Positives = 99/298 (33%), Gaps = 23/298 (7%)
Query: 283 MDTYSGPPPGPGPGPALPAHSSPGL-----------PPPALSPSKVHGVRYGQPATSETA 331
+ T + PPP P P S P PPP +PS PA++ T
Sbjct: 1458 ISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTL 1517
Query: 332 EVPSSSGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQ 391
++ P T +TP +P+ + T + P PP +T T
Sbjct: 1518 PPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTT 1577
Query: 392 TSPGLNQQPQNLIMASLPGVMTIGPGEPASL----GPTFTNTGASTLVIGLASTQAQSVP 447
SP P + + T P P + PT T + +T I ++ P
Sbjct: 1578 PSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPP 1637
Query: 448 VINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKP 507
TT P + P P+ P PP+ + T P SP P
Sbjct: 1638 TTTPSPPPTTTTTPPPTTTPSPPTTTTP-SPPITTTTTPPPTTTP----SSPITTTPSPP 1692
Query: 508 EVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDTEASSESGLHTPASQATTL 565
T + + IT TT S+ + +P T+ + ++ S P + TTL
Sbjct: 1693 TTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPS---PPTTTMTTL 1747
Score = 47.0 bits (110), Expect = 5e-05
Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 30/155 (19%)
Query: 285 TYSGPPPGPGPGPALPAHSSPGL-----PPPALSPSKVHGVRYGQPATSETAEVPSSS-G 338
T + PPP P P SP + PPP +PS P T+ T P+++
Sbjct: 1647 TTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPS 1706
Query: 339 GPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQ 398
P+ T +TP +P+ P + ++T + + P PP +T+T L +SP
Sbjct: 1707 SPITTTTTPSSTTTPS---PPPTTMTTPSPTTT----PSPPTTTMTTLPPTTTSSP---- 1755
Query: 399 QPQNLIMASLPGVMTIGPGEPASLGPTFTNTGAST 433
+T P P+ PTF+ +T
Sbjct: 1756 -------------LTTTPLPPSITPPTFSPFSTTT 1777
Score = 45.4 bits (106), Expect = 2e-04
Identities = 81/343 (23%), Positives = 115/343 (33%), Gaps = 38/343 (11%)
Query: 283 MDTYSGPPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLV 342
MD P P P+ P S+ LPP +PS P T+ T P+++ P +
Sbjct: 1392 MDKCITTPSPPTTTPSPPPTSTTTLPPTT-TPSP--------PTTTTTTPPPTTTPSPPI 1442
Query: 343 TVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQN 402
T +T P PS + +T + P PP +T + + P
Sbjct: 1443 TTTT----TPPPTTTPSPPISTTTTPPPTTT--PSPPTTTPSPPTTTPSPPTTTTTTPPP 1496
Query: 403 LIMASLPGVMTI-GPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSM--GSSLTTL 459
S P I P +L PT T + +T T S P + +S TTL
Sbjct: 1497 TTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTL 1556
Query: 460 QPVQFSQPLHPSYQQPLMPPVQS---HVTQSPFMATMAQLQSPHALYSHKPEVAQY---- 512
P + P P PP + T +P T+ P P
Sbjct: 1557 PPT--TTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPP 1614
Query: 513 THTGLLPQTMLITDTTNLSALASLT-----PTKQVFTSDTEASSESGLHTPASQATTLHV 567
T T P T IT T+ + L T PT T S TP+ TT
Sbjct: 1615 TTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTT 1674
Query: 568 P-----SQDPASIQHLQPAHRLSA-SPTVSSSSLVLYQSSDSS 604
P P + P ++ SPT + SS + ++ SS
Sbjct: 1675 PPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSS 1717
>gi|167736355 mucin 4 isoform a [Homo sapiens]
Length = 5284
Score = 55.1 bits (131), Expect = 2e-07
Identities = 88/322 (27%), Positives = 125/322 (38%), Gaps = 39/322 (12%)
Query: 326 ATSETAEVPSSSGGPLVTVS-TPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLT 384
+T +T +P +S T TPLH SP+ H+ L SA+ G P
Sbjct: 1274 STGDTTPLPVTSTSSASTGHVTPLHVTSPSSASTGHATPLPVTSLSSASTGDTMP----- 1328
Query: 385 ALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLAST-QA 443
L TSP ++ G T P AS T T AST QA
Sbjct: 1329 ----LPVTSPS----------SASTGDTTPLPVTDASSVSTGHTTPLHVTDASSASTGQA 1374
Query: 444 QSVPV--INSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQS-----HVTQSPFMATMAQL 496
+PV ++S+ + TT PV + PL+ S H T P + + +
Sbjct: 1375 TPLPVTSLSSVSTGDTTPLPVTSPSSASTGHATPLLVTDTSSASTGHATPLP-VTDASSV 1433
Query: 497 QSPHA--LYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDT---EASS 551
+ HA L P A HT LP T + +T + +T T V T DT +S
Sbjct: 1434 STDHATSLPVTIPSAASTGHTTPLPVTDTSSASTGQATSLLVTDTSSVSTGDTTPLPVTS 1493
Query: 552 ESGLHTPASQATTLHVPSQDPASIQHLQ--PAHRLSASPTVSSSSLVLYQSSDSSNGQSH 609
S T T LHV S AS H P LS++ T + L + S +S G +
Sbjct: 1494 TSSAST--GHVTPLHVTSPSSASTGHATPLPVTSLSSASTGDTMPLPVTSPSSASTGDTT 1551
Query: 610 LLP-SNHSVIETFISTQMASSS 630
LP ++ S + T +T + +S
Sbjct: 1552 PLPVTDASSVSTGHTTPLPVTS 1573
Score = 49.7 bits (117), Expect = 8e-06
Identities = 86/366 (23%), Positives = 132/366 (36%), Gaps = 53/366 (14%)
Query: 289 PPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTV-STP 347
P P P A H++P LP S + +T +T +P ++ L T +TP
Sbjct: 1600 PLPVTSPSSASTGHTTP-LPVTDTSSA----------STGDTTPLPVTNASSLSTGHATP 1648
Query: 348 LHQVSPTGLEPSHSLLSTEAKLVSAAGG---PLPPVSTLTALHS------LEQTSPGLNQ 398
LH SP+ H+ SA+ G PLP +A + S
Sbjct: 1649 LHVTSPSSASTGHATPLPVTSTSSASTGHATPLPVTGLSSATTDDTTRLPVTDVSSASTG 1708
Query: 399 QPQNLIMASLPGVMTIGPGEPASLGPTFTNTG-ASTLVIGLAST----QAQSVPVINSMG 453
Q L + SL V T P+ +TG AS L++ AS+ QA +PV ++
Sbjct: 1709 QATPLPVTSLSSVSTGDTTPLPVTSPSSASTGHASPLLVTDASSASTGQATPLPVTDTSS 1768
Query: 454 SSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHK------- 506
S P+ + S PV + S A + SP + +
Sbjct: 1769 VSTAHATPLPVTGLSSASTDDTTRLPVTDVSSASTGQAIPLPVTSPSSASTGDTTPLPVT 1828
Query: 507 -----------------PEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDTEA 549
P A HT LP T + +T + +T V T DT
Sbjct: 1829 DASSASTGDTTSLPVTIPSSASSGHTTSLPVTDASSVSTGHATSLLVTDASSVSTGDTTP 1888
Query: 550 SSESGLHTPASQATT-LHVPSQDPASIQHLQ--PAHRLSASPTVSSSSLVLYQSSDSSNG 606
+ ++ ++ TT LHV S H P LS++ T ++ L + S +S+G
Sbjct: 1889 LPVTDTNSASTGDTTPLHVTDASSVSTGHATSLPVTSLSSASTGDTTPLPVTSPSSASSG 1948
Query: 607 QSHLLP 612
+ LP
Sbjct: 1949 HTTPLP 1954
Score = 46.6 bits (109), Expect = 7e-05
Identities = 92/342 (26%), Positives = 130/342 (38%), Gaps = 40/342 (11%)
Query: 308 PPPALSPSKVH-GVRYGQPATSETAE-------VPSSSGGPLVTV-STPLHQVSPTGLEP 358
P P SPS V G P T ++E +P +S T STPL +
Sbjct: 1008 PLPVTSPSSVSTGHTTPLPVTDTSSESTGHVTPLPVTSFSSASTGDSTPLPVTDTSSAST 1067
Query: 359 SHSLLSTEAKLVSAAGG---PLPPVSTLTALHSLEQTSPGLNQQPQNLIMAS---LPGVM 412
H L SA+ G PLP T +A + P + + + +
Sbjct: 1068 GHVTPLPVTSLSSASTGDTTPLPVTDTSSASTGHATSLPVTDTSSVSTGHTTPLPVTDTS 1127
Query: 413 TIGPGEPASLGPTFTN---TGASTLV----IGLAST-QAQSVPV--INSMGSSLTTLQPV 462
+ G SL T T+ TG +T + AST QA +PV ++S+ + TT PV
Sbjct: 1128 SASTGHATSLPVTDTSSVSTGHTTPLHVTDASSASTGQATPLPVTSLSSVSTGDTTPLPV 1187
Query: 463 QFSQPLHPSYQQPLMPPVQS-----HVTQSPFMATMAQLQSPHA--LYSHKPEVAQYTHT 515
+ PL+ S H T P + + + + HA L P A HT
Sbjct: 1188 TSPSSASTGHATPLLVTDTSSASTGHATPLP-VTDASSVSTDHATSLPVTIPSAASTGHT 1246
Query: 516 GLLPQTMLITDTTNLSALASLTPTKQVFTSDT---EASSESGLHTPASQATTLHVPSQDP 572
LP T + +T + +T T V T DT +S S T T LHV S
Sbjct: 1247 TPLPVTDTSSASTGQATSLLVTDTSSVSTGDTTPLPVTSTSSAST--GHVTPLHVTSPSS 1304
Query: 573 ASIQHLQ--PAHRLSASPTVSSSSLVLYQSSDSSNGQSHLLP 612
AS H P LS++ T + L + S +S G + LP
Sbjct: 1305 ASTGHATPLPVTSLSSASTGDTMPLPVTSPSSASTGDTTPLP 1346
Score = 41.6 bits (96), Expect = 0.002
Identities = 81/355 (22%), Positives = 120/355 (33%), Gaps = 33/355 (9%)
Query: 284 DTYSGPPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVT 343
DTYS P P S+ L + G S S G
Sbjct: 2597 DTYSASTGQATPLPVTDTSSASTGDTTPLPVTDTSSASTGHATPLPVTNTSSVSTGH--- 2653
Query: 344 VSTPLHQVSPTGLEPSHS--LLSTEAKLVSAAGGPLPPVSTLTALH-----SLEQTSPGL 396
+TPLH SP+ H+ L T+A VS PV+ +++ SL T P
Sbjct: 2654 -ATPLHVTSPSSASTGHTTPLPVTDASSVSTGHATSLPVTDASSVFTGHATSLPVTIPS- 2711
Query: 397 NQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPV-------- 448
+ + + ++ G SL T ++ ++ L T A SV
Sbjct: 2712 SASSGHTTPLPVTDASSVSTGHATSLPVTDASSVSTGHATPLPVTDASSVSTGHATPLPL 2771
Query: 449 --INSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVT---QSPFMAT-MAQLQSPHA- 501
++S+ + TT PV + PL S V+ +P T + + HA
Sbjct: 2772 TSLSSVSTGDTTPLPVTDTSSASTGQATPLPVTSLSSVSTGDTTPLPVTDTSSASTGHAT 2831
Query: 502 -LYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQV---FTSDTEASSESGLHT 557
L A H LP T + +T + L +T T + + S + T
Sbjct: 2832 SLPVTDTSSASTGHATPLPDTDTSSASTGHATLLPVTDTSSASIGHATSLPVTDTSSIST 2891
Query: 558 PASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSSLVLYQSSDSSNGQSHLLP 612
AT LHV S AS H P S + + L+ +S SS H P
Sbjct: 2892 --GHATPLHVTSPSSASTGHATPLPVTDTSSASTGHANPLHVTSPSSASTGHATP 2944
Score = 39.3 bits (90), Expect = 0.011
Identities = 82/362 (22%), Positives = 127/362 (35%), Gaps = 48/362 (13%)
Query: 294 GPGPALPAHSS----PGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTV-STPL 348
G P +P+ S PG P S S G A ++ + ++G L++ S +
Sbjct: 527 GTIPRVPSKVSAIGEPGEPTTYSSHSTTLPKTTGAGAQTQWTQETGTTGEALLSSPSYSV 586
Query: 349 HQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASL 408
Q+ T PS S + P ST+ + + Q SP ++Q+ +
Sbjct: 587 TQMIKTATSPSSSPMLDRHTSQQITTAPSTNHSTIHSTSTSPQESPAVSQRGHTQAPQTT 646
Query: 409 PGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQ--AQSVPVINSMGSSLTTLQPVQFSQ 466
T P + T T G+S G + ++ Q P I S+ TT P
Sbjct: 647 QESQTTRSVSPMTDTKTVTTPGSSFTASGHSPSEIVPQDAPTI----SAATTFAPA---- 698
Query: 467 PLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLITD 526
P H TQ+P A A S A + + TG L +
Sbjct: 699 -----------PTGDGHTTQAPTTALQAAPSSHDATLGPSGGTS-LSKTGALTLANSVVS 746
Query: 527 T--------------TNLSALASLTPTKQVFTSDTEASSESGLHTPASQATT-----LHV 567
T T+ A++T T Q TEAS ++ PAS +
Sbjct: 747 TPGGPEGQWTSASASTSPDTAAAMTHTHQ--AESTEASGQTQTSEPASSGSRTTSAGTAT 804
Query: 568 PSQDPASIQHLQPAHRLSASPTVSSSSLVLYQSSDSSNGQSHLLPSNHSVIETFISTQMA 627
PS AS + +S S + S + S ++ + LL ++ S +ST MA
Sbjct: 805 PSSSGASGTTPSGSEGISTSGETTRFSSNPSRDSHTTQSTTELLSASASHGAIPVSTGMA 864
Query: 628 SS 629
SS
Sbjct: 865 SS 866
Score = 38.9 bits (89), Expect = 0.015
Identities = 82/360 (22%), Positives = 130/360 (36%), Gaps = 51/360 (14%)
Query: 286 YSGPPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVS 345
++ P P H++P LP +LS S G P T +T+ + PL S
Sbjct: 2749 HATPLPVTDASSVSTGHATP-LPLTSLS-SVSTGDTTPLPVT-DTSSASTGQATPLPVTS 2805
Query: 346 ---------TPLHQVSPTGLEPSHSLLSTEAKLVSAAGG---PLPPVSTLTALHSLEQTS 393
TPL + H+ SA+ G PLP T +A
Sbjct: 2806 LSSVSTGDTTPLPVTDTSSASTGHATSLPVTDTSSASTGHATPLPDTDTSSASTGHATLL 2865
Query: 394 PGLNQQPQNLIMA-SLPGVMT--IGPGEPASL---GPTFTNTGASTLVIGLASTQAQSVP 447
P + ++ A SLP T I G L P+ +TG +T +P
Sbjct: 2866 PVTDTSSASIGHATSLPVTDTSSISTGHATPLHVTSPSSASTGHAT-----------PLP 2914
Query: 448 VINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSH-- 505
V ++ +S P+ + P S PV + S AT + S ++ +
Sbjct: 2915 VTDTSSASTGHANPLHVTSPSSASTGHATPLPVTDTSSASTGHATPLPVTSLSSVSTGDT 2974
Query: 506 ------KPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDT-------EASSE 552
P A HT LP T + +T + +T T T DT +S+
Sbjct: 2975 TPLPVTSPSSASTGHTTPLPVTDTSSASTGQATALPVTSTSSASTGDTTPLPVTDTSSAS 3034
Query: 553 SGLHTPASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSSLVLYQSSDSSNGQSHLLP 612
+G TP + V + D + P S++ T ++ L++ +S +S GQ+ LP
Sbjct: 3035 TGQATPLPVTSLSSVSTGDTTPLPVTSP----SSASTGHATPLLVTDASSASTGQATPLP 3090
Score = 38.1 bits (87), Expect = 0.025
Identities = 85/345 (24%), Positives = 125/345 (36%), Gaps = 73/345 (21%)
Query: 326 ATSETAEVPSSSGG------PLVTVS-------TPLHQVSPTGLEPSHSLLSTEAKLVSA 372
AT +PSSS P+ + S TPLH SP+ H
Sbjct: 3566 ATPLPVTIPSSSSSGHTTPLPVTSTSSVSTGHVTPLHVTSPSSASTGHVT---------- 3615
Query: 373 AGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGAS 432
PLP ST +A S +P L ++ G T P AS T T
Sbjct: 3616 ---PLPVTSTSSA--STGHATPLLVTDASSV----STGHATPLPVTDASSASTGDTTPLP 3666
Query: 433 TLVIGLAST-QAQSVPV--INSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPF 489
AST QA +PV ++S+ + TT PV + + PL + S V+
Sbjct: 3667 VTDTSSASTGQATPLPVTSLSSVSTGDTTPLPVTDASSASTGHATPLPVTIPSSVSTGDT 3726
Query: 490 MATMAQLQSPHALYSHKPEVAQYTHTGLLPQTML------------ITDTTNLSALAS-- 535
M L P A H LP T L +TDT++ S +
Sbjct: 3727 M----------PLPVTSPSSASTGHATPLPVTGLSSASTGDTTPLPVTDTSSASTRHATP 3776
Query: 536 --LTPTKQVFTSDTE-------ASSESGLHTPASQATTLHVPSQDPASIQHLQPAHRLSA 586
+T T T DT +S+ +G TP +T + D + P S+
Sbjct: 3777 LPVTDTSSASTDDTTRLPVTDVSSASTGHATPLPVTSTSSASTGDTTPL----PVTDTSS 3832
Query: 587 SPTVSSSSLVLYQSSDSSNGQSHLLP-SNHSVIETFISTQMASSS 630
T ++SL + S +S G + LP ++ S + T +T + +S
Sbjct: 3833 VSTGHATSLPVTSRSSASTGHATPLPVTDTSSVSTGHATPLPVTS 3877
Score = 33.1 bits (74), Expect = 0.80
Identities = 72/275 (26%), Positives = 102/275 (37%), Gaps = 32/275 (11%)
Query: 345 STPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVS-TLTALHSLEQTSPGLNQQPQNL 403
+TPL S + + H+ SA+ G PV T T+ S T+P +L
Sbjct: 3870 ATPLPVTSTSSVSTGHATPLPVTSPSSASTGHATPVPVTSTSSASTGDTTPLPVTNASSL 3929
Query: 404 IMASLPGVMTIGPGEPASLGPTFTN--TGASTLVIGLASTQAQSVPVINSMGSSLTTLQP 461
+ P AS G T T T AS+ G A+ + ++S+ + TT P
Sbjct: 3930 STGHATPLHVTSPSS-ASRGDTSTLPVTDASSASTGHATPLP--LTSLSSVSTGDTTPLP 3986
Query: 462 VQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQT 521
V + PL PV S + S T + P + A HT LP T
Sbjct: 3987 VTDTSSASTGQATPL--PVTSLSSVSTGDTTPLPVTIPSS--------ASSGHTTSLPVT 4036
Query: 522 MLITDTTNLSALASLTPTKQVFTSD------TEASSESGLH------TPASQATTLHVPS 569
+ +T +T T T D T+ SS S H T S A+T H
Sbjct: 4037 DASSVSTGHGTPLPVTSTSSASTGDTTPLPVTDTSSASTGHATPLPVTDTSSASTGHATP 4096
Query: 570 QDPASIQHLQPAHRLSASP-TVSSSSLVLYQSSDS 603
S+ + H A+P VSS++ SSDS
Sbjct: 4097 LPVTSLSSVSTGH---ATPLAVSSATSASTVSSDS 4128
>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
Length = 1952
Score = 54.3 bits (129), Expect = 3e-07
Identities = 88/378 (23%), Positives = 135/378 (35%), Gaps = 66/378 (17%)
Query: 301 AHSSPGLPPPALSPSKVHGVRYGQPATS-------ETAEVPSSSGGPLVTVSTPLHQVSP 353
+HSSPG L P+ G+P TS ET +P S+ ++ + SP
Sbjct: 946 SHSSPGSTDTTLLPASTTTXLVGEPTTSPISSGSTETTALPGSTTTAGLSEKSTTFYSSP 1005
Query: 354 TGLEPSHSLLSTEAKLVS--AAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGV 411
+ + S ST + VS + P ST T T PG++Q+
Sbjct: 1006 RSPDTTLSPASTTSSGVSEESTTSHSRPGSTHTTAFPGSTTMPGVSQE------------ 1053
Query: 412 MTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQP--------VQ 463
T P S T + + +G ST S P GS+ TTL P ++
Sbjct: 1054 STASHSSPGSTDTTLSPRSTTASSLGPESTTFHSGP-----GSTETTLLPDNTTASGLLE 1108
Query: 464 FSQPLHPSYQQP--LMPPVQSHVTQ------SPFMATMAQLQSPHALYSHKPEVAQYTH- 514
S P+H S P + P S Q + ++ + +P S E++ +H
Sbjct: 1109 ASTPVHSSTGSPRTTLSPAGSTTRQGESTTFQSWPSSKDTMPAPPTTTSAFVELSTTSHG 1168
Query: 515 -TGLLPQTMLITDTTNL-----SALASLTPTKQVFTSDTEASSESGL-------HTPASQ 561
+P T +T S +P T S+ SGL H+
Sbjct: 1169 SPSSIPTTHFSASSTTFGRSEESTTVHSSPVAPATTPSPARSTTSGLVEESTAYHSSPGS 1228
Query: 562 ATTLHVPSQDPAS-------IQHLQPAHRLSASPTVSSSSL---VLYQSSDSSNGQSHLL 611
T+H P AS H H +S+ P+ +S+ + Y SS S +H
Sbjct: 1229 TQTMHFPESSTASGRSEESRTSHSSTTHTISSPPSTTSALVEEPTSYHSSPGSIATTHFP 1288
Query: 612 PSNHSVIETFISTQMASS 629
S+ + + ST SS
Sbjct: 1289 ESSTTSGRSEESTASHSS 1306
Score = 50.1 bits (118), Expect = 6e-06
Identities = 90/355 (25%), Positives = 132/355 (37%), Gaps = 51/355 (14%)
Query: 301 AHSSPGLPPPALSPS-KVHGVRYGQPATS-------ETAEVPSSSGGPLVTVSTPLHQVS 352
+HS PG L PS V G+P TS ET +P S+ ++ + S
Sbjct: 148 SHSGPGATGTTLFPSHSATSVFVGEPKTSPITSASMETTALPGSTTTAGLSEKSTTFYSS 207
Query: 353 PTGLEPSHSLLSTEAKLVS--AAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPG 410
P + + S T + VS + P T T T PG++Q+ + S+PG
Sbjct: 208 PRSPDRTLSPARTTSSGVSEKSTTSHSRPGPTHTIAFPDSTTMPGVSQE--STASHSIPG 265
Query: 411 VM--TIGPGE--PASLGPTFTNTGAS------------TLVIGLASTQAQSVPVINSMGS 454
T+ PG P+SLGP T +S T GL S PV +S GS
Sbjct: 266 STDTTLSPGTTTPSSLGPESTTFHSSPGYTKTTRLPDNTTTSGLLEA---STPVHSSTGS 322
Query: 455 SLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTH 514
TTL P S H S T T + Y P TH
Sbjct: 323 PHTTLSPA--SSTTHEGEPTTFQSWPSSKDTSPAPSGTTSAFVKLSTTYHSSPSSTPTTH 380
Query: 515 TGLLPQTMLITDTT---NLSALASLT---PTKQVFTSDTEAS--------SESGLHTPAS 560
T+ ++ + + S +A+ T P + + E S S +H P S
Sbjct: 381 FSASSTTLGHSEESTPVHSSPVATATTPPPARSATSGHVEESTAYHRSPGSTQTMHFPES 440
Query: 561 QATTLHVPSQDPASIQHLQPAHRLSASP-TVSSSSLVLYQSSDSSNGQSHLLPSN 614
T+ H S++ A+ H H S++P T ++ + Y SS S +H S+
Sbjct: 441 STTSGH--SEESATF-HGSTTHTKSSTPSTTAALAHTSYHSSLGSTETTHFRDSS 492
Score = 39.3 bits (90), Expect = 0.011
Identities = 92/360 (25%), Positives = 125/360 (34%), Gaps = 60/360 (16%)
Query: 300 PAHSSPGLPPPALSPSKVHGVRYGQPAT-------SETAEVPSSSGGPLVTVSTPLH--- 349
P HSS G P LSP+ G+P T +T+ PS + V +ST H
Sbjct: 315 PVHSSTGSPHTTLSPAS-STTHEGEPTTFQSWPSSKDTSPAPSGTTSAFVKLSTTYHSSP 373
Query: 350 --------QVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQT----SPGLN 397
S T L S + V+ A P PP + T+ H E T SPG
Sbjct: 374 SSTPTTHFSASSTTLGHSEESTPVHSSPVATATTP-PPARSATSGHVEESTAYHRSPGST 432
Query: 398 QQPQNLIMASLPGVMTIGPGEPASL---GPTFTNTGASTLVIGLASTQAQSVPVINSMGS 454
Q M T G E ++ T T + + LA T S S+GS
Sbjct: 433 Q-----TMHFPESSTTSGHSEESATFHGSTTHTKSSTPSTTAALAHTSYHS-----SLGS 482
Query: 455 SLTT--LQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQL---QSPHALYSHKPEV 509
+ TT S S P + T P +T + L +P + S E
Sbjct: 483 TETTHFRDSSTISGRSEESKASHSSPDAMA-TTVLPAGSTPSVLVGDSTPSPISSGSMET 541
Query: 510 ----AQYTHTGLLPQTMLI------TDTTNLSALASLTPTKQVFTSDTEASSESGLHTPA 559
T GL ++ DTT+L AS+T + S T S HT A
Sbjct: 542 TALPGSTTKPGLSEKSTTFYSSPRSPDTTHLP--ASMTSSGVSEESTTSHSRPGSTHTTA 599
Query: 560 SQATTLHVPSQDPASIQHLQPA---HRLSASPTVSSSSLVLYQSSDSSNG--QSHLLPSN 614
+T ++ H P LS T +SS Y + S G ++ LLP N
Sbjct: 600 FPGSTTMPGLSQESTASHSSPGPTDTTLSPGSTTASSLGPEYTTFHSRPGSTETTLLPDN 659
Score = 36.6 bits (83), Expect = 0.072
Identities = 79/357 (22%), Positives = 136/357 (38%), Gaps = 36/357 (10%)
Query: 300 PAHSSPGLPPPALSPSKVHGVRYGQ-------PATSETAEVPSSSGGPLVTVSTPLHQVS 352
P HSS G P LSP+ R G+ P++ +T P ++ V +ST H S
Sbjct: 1112 PVHSSTGSPRTTLSPAG-STTRQGESTTFQSWPSSKDTMPAPPTTTSAFVELSTTSHG-S 1169
Query: 353 PTGLEPSHSLLST------------EAKLVSAAGGPLPPVSTLTAL---HSLEQTSPGLN 397
P+ + +H S+ + V+ A P P ST + L + +SPG
Sbjct: 1170 PSSIPTTHFSASSTTFGRSEESTTVHSSPVAPATTPSPARSTTSGLVEESTAYHSSPGST 1229
Query: 398 QQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVP---VINSMGS 454
Q ++ G +S T ++ ++T + T S P
Sbjct: 1230 QTMHFPESSTASGRSEESRTSHSSTTHTISSPPSTTSALVEEPTSYHSSPGSIATTHFPE 1289
Query: 455 SLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQ-SPHALYSHKPEVAQYT 513
S TT + S H S + P+ +H T S +A SP ++ + A T
Sbjct: 1290 SSTTSGRSEESTASHSSPDTNGITPLPAHFTTSGRIAESTTFYISPGSMETTLASTA--T 1347
Query: 514 HTGLLPQTMLITDTTNLSALASLTPTKQVFTSDTEASSESGLHTPASQATTLHVPSQDPA 573
GL ++ ++ ++ S +L+P TS + + + L++ A T P+
Sbjct: 1348 TPGLSAKSTILYSSSR-SPDQTLSPAS--MTSSSISGEPTSLYSQAESTHTTAFPASTTT 1404
Query: 574 SIQHLQPAHRLSASPTVSSSSLVLYQSSDSSNGQSHLLPSNHSVIETFISTQMASSS 630
S Q + + P + ++L + SS Q P HS + +ST +S+
Sbjct: 1405 S-GLSQESTTFHSKPGSTETTLSPGSITTSSFAQEFTTP--HSQPGSALSTVSPAST 1458
Score = 34.3 bits (77), Expect = 0.36
Identities = 86/367 (23%), Positives = 123/367 (33%), Gaps = 77/367 (20%)
Query: 300 PAHSSP----GLPPPALSPSKVH----GVRYGQPATSETAEVPSSS-------------G 338
P HSSP PPPA S + H + P +++T P SS G
Sbjct: 396 PVHSSPVATATTPPPARSATSGHVEESTAYHRSPGSTQTMHFPESSTTSGHSEESATFHG 455
Query: 339 GPLVTVSTPLHQVSPTGLEPSHSLL-STEAKLVSAAGGPLPPVSTLTALHS----LEQTS 393
T S+ + HS L STE + A HS + T
Sbjct: 456 STTHTKSSTPSTTAALAHTSYHSSLGSTETTHFRDSSTISGRSEESKASHSSPDAMATTV 515
Query: 394 PGLNQQPQNLIMASLPGVMTIGPGEPASL---------------------GPTFTNTGAS 432
P L+ S P ++ G E +L P T+ AS
Sbjct: 516 LPAGSTPSVLVGDSTPSPISSGSMETTALPGSTTKPGLSEKSTTFYSSPRSPDTTHLPAS 575
Query: 433 TLVIGLA--STQAQSVPVINSMGSSLTTLQPVQFSQP-LHPSYQQPLMPPVQSHVTQSPF 489
G++ ST + S P GS+ TT P + P L P + T SP
Sbjct: 576 MTSSGVSEESTTSHSRP-----GSTHTTAFPGSTTMPGLSQESTASHSSPGPTDTTLSPG 630
Query: 490 MATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDTEA 549
T + L + + +P T T LLP +TT L + P S
Sbjct: 631 STTASSLGPEYTTFHSRPGS---TETTLLPD-----NTTASGLLEASMPVHSSTRSPHTT 682
Query: 550 SSESGLHTPASQATTLHV-PSQDPASIQHLQPAHRLSASPTVSSSSLVLYQSSDSSNGQS 608
S +G T ++TT H PS + A PT +S+ + S +S+G
Sbjct: 683 LSPAGSTTRQGESTTFHSWPSSNDTR----------PAPPTTTSA---FVEPSTTSHGSP 729
Query: 609 HLLPSNH 615
+P+ H
Sbjct: 730 SSIPTTH 736
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 53.1 bits (126), Expect = 7e-07
Identities = 65/241 (26%), Positives = 85/241 (35%), Gaps = 46/241 (19%)
Query: 305 PGLPPP--ALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPLHQVSPTGLEPSHSL 362
PG PPP L P GV G P + SS GGP H T + S S
Sbjct: 210 PGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGP---NGGKQHPPPTTPISVSSSG 266
Query: 363 LS----TEAKLVSAAGG----------------PLPPVSTLTALHSLEQTSPGLNQQPQN 402
S T+ GG LPP L L++ + PGL QP
Sbjct: 267 ASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQP-- 324
Query: 403 LIMASLPGVMTIGPG----------------EPASLGPTFTNTGASTLVIGLASTQAQSV 446
+ LP +G G P SL P ++ A + +S+ + S
Sbjct: 325 -LPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSA 383
Query: 447 PVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHK 506
+S SS ++ P SQ L PSY PP V+ P T L S A++S
Sbjct: 384 AASSSSSSSSSSASPFPASQAL-PSYPHSFPPPTSLSVSNQPPKYTQPSLPS-QAVWSQG 441
Query: 507 P 507
P
Sbjct: 442 P 442
Score = 37.7 bits (86), Expect = 0.032
Identities = 49/191 (25%), Positives = 66/191 (34%), Gaps = 47/191 (24%)
Query: 288 GPPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTP 347
G PPGP GP L SP PPA S + +R+ ++S ++ SSS
Sbjct: 341 GLPPGPEKGPTLA--PSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSS---------- 388
Query: 348 LHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTAL-HSL-EQTSPGLNQQPQNLIM 405
+ S++ P P L + HS TS ++ QP
Sbjct: 389 -------------------SSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQ 429
Query: 406 ASLP--GVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQ 463
SLP V + GP P G LA++ A P S G+ T PV
Sbjct: 430 PSLPSQAVWSQGPPPPPPYGRL------------LANSNAHPGPFPPSTGAQSTAHPPVS 477
Query: 464 FSQPLHPSYQQ 474
H QQ
Sbjct: 478 THHHHHQQQQQ 488
Score = 32.3 bits (72), Expect = 1.4
Identities = 62/239 (25%), Positives = 83/239 (34%), Gaps = 33/239 (13%)
Query: 287 SGPPPGPGPGPALPAHSSPGLPPPALSPS------KVHGVRYGQPATSETAEVPSSSGGP 340
SGPPP L SS P A+SPS G + P S+ + + GP
Sbjct: 507 SGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGP 566
Query: 341 LVTVSTPLHQVSPTGLEP-SHSLLSTEAKLVSAAGGPLPPVSTL-TALHSLEQTSPGLNQ 398
V+ S+ + G P SH + ++ A P PPV T+ T+ +L +
Sbjct: 567 PVSSSSNSSSSTSQGSYPCSH---PSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVAS 623
Query: 399 QPQNLIMASLPGVMTIG--------------PGEPASLGPTFTNTGASTLVIGLASTQAQ 444
P AS PG G PG P+F TG G T
Sbjct: 624 SPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSF-RTGTPP---GYRGTSPP 679
Query: 445 SVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALY 503
+ P GS P+ P PS L PP + + P AT + Q P Y
Sbjct: 680 AGPGTFKPGSPTVGPGPL---PPAGPSGLPSLPPPPAAPASGPPLSATQIK-QEPAEEY 734
Score = 31.6 bits (70), Expect = 2.3
Identities = 29/89 (32%), Positives = 36/89 (40%), Gaps = 18/89 (20%)
Query: 287 SGPPPGPG----------PGPALPAHSS--PGLPPPALSPSKVHGVRYGQ--PATSETAE 332
+ PP GPG PGP PA S P LPPP +P+ + Q +E E
Sbjct: 676 TSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYE 735
Query: 333 VPSSSGGPLVTVSTPLHQVSPTGLEPSHS 361
P S P + S P V PSH+
Sbjct: 736 TPESPVPPARSPSPPPKVVD----VPSHA 760
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 53.1 bits (126), Expect = 7e-07
Identities = 65/241 (26%), Positives = 85/241 (35%), Gaps = 46/241 (19%)
Query: 305 PGLPPP--ALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPLHQVSPTGLEPSHSL 362
PG PPP L P GV G P + SS GGP H T + S S
Sbjct: 210 PGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGP---NGGKQHPPPTTPISVSSSG 266
Query: 363 LS----TEAKLVSAAGG----------------PLPPVSTLTALHSLEQTSPGLNQQPQN 402
S T+ GG LPP L L++ + PGL QP
Sbjct: 267 ASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQP-- 324
Query: 403 LIMASLPGVMTIGPG----------------EPASLGPTFTNTGASTLVIGLASTQAQSV 446
+ LP +G G P SL P ++ A + +S+ + S
Sbjct: 325 -LPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSA 383
Query: 447 PVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHK 506
+S SS ++ P SQ L PSY PP V+ P T L S A++S
Sbjct: 384 AASSSSSSSSSSASPFPASQAL-PSYPHSFPPPTSLSVSNQPPKYTQPSLPS-QAVWSQG 441
Query: 507 P 507
P
Sbjct: 442 P 442
Score = 37.7 bits (86), Expect = 0.032
Identities = 49/191 (25%), Positives = 66/191 (34%), Gaps = 47/191 (24%)
Query: 288 GPPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTP 347
G PPGP GP L SP PPA S + +R+ ++S ++ SSS
Sbjct: 341 GLPPGPEKGPTLA--PSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSS---------- 388
Query: 348 LHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTAL-HSL-EQTSPGLNQQPQNLIM 405
+ S++ P P L + HS TS ++ QP
Sbjct: 389 -------------------SSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQ 429
Query: 406 ASLP--GVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQ 463
SLP V + GP P G LA++ A P S G+ T PV
Sbjct: 430 PSLPSQAVWSQGPPPPPPYGRL------------LANSNAHPGPFPPSTGAQSTAHPPVS 477
Query: 464 FSQPLHPSYQQ 474
H QQ
Sbjct: 478 THHHHHQQQQQ 488
Score = 32.3 bits (72), Expect = 1.4
Identities = 62/239 (25%), Positives = 83/239 (34%), Gaps = 33/239 (13%)
Query: 287 SGPPPGPGPGPALPAHSSPGLPPPALSPS------KVHGVRYGQPATSETAEVPSSSGGP 340
SGPPP L SS P A+SPS G + P S+ + + GP
Sbjct: 507 SGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGP 566
Query: 341 LVTVSTPLHQVSPTGLEP-SHSLLSTEAKLVSAAGGPLPPVSTL-TALHSLEQTSPGLNQ 398
V+ S+ + G P SH + ++ A P PPV T+ T+ +L +
Sbjct: 567 PVSSSSNSSSSTSQGSYPCSH---PSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVAS 623
Query: 399 QPQNLIMASLPGVMTIG--------------PGEPASLGPTFTNTGASTLVIGLASTQAQ 444
P AS PG G PG P+F TG G T
Sbjct: 624 SPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSF-RTGTPP---GYRGTSPP 679
Query: 445 SVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALY 503
+ P GS P+ P PS L PP + + P AT + Q P Y
Sbjct: 680 AGPGTFKPGSPTVGPGPL---PPAGPSGLPSLPPPPAAPASGPPLSATQIK-QEPAEEY 734
Score = 31.6 bits (70), Expect = 2.3
Identities = 29/89 (32%), Positives = 36/89 (40%), Gaps = 18/89 (20%)
Query: 287 SGPPPGPG----------PGPALPAHSS--PGLPPPALSPSKVHGVRYGQ--PATSETAE 332
+ PP GPG PGP PA S P LPPP +P+ + Q +E E
Sbjct: 676 TSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYE 735
Query: 333 VPSSSGGPLVTVSTPLHQVSPTGLEPSHS 361
P S P + S P V PSH+
Sbjct: 736 TPESPVPPARSPSPPPKVVD----VPSHA 760
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 52.4 bits (124), Expect = 1e-06
Identities = 90/346 (26%), Positives = 133/346 (38%), Gaps = 35/346 (10%)
Query: 287 SGPPPGPGPGPALPAHSSP-----GLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPL 341
SGP PG P PA+ S GLP PA S +P T + SS+
Sbjct: 165 SGPTPGT-PSPAMARRSRAAGTEVGLPRPAPSARP-------RPPTEGPRKSVSSASEHS 216
Query: 342 VTVSTPLHQVSPT---GLE--PSHSLLSTEAKLVSAA-GGPLPPVSTLTALHSLEQTSPG 395
T +P + P+ GL+ S SL S+ L S A GP + H + G
Sbjct: 217 TTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKG 276
Query: 396 LNQ-QPQNLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGS 454
L +P + +GP + L T + +G + A +P
Sbjct: 277 LQALRPPQVTPPRKDAAPALGPLSSSPLA-TPSPSGTKARPVPPPDNAATPLPATLPPSP 335
Query: 455 SLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTH 514
L T P+ P P Q L P + +Q+P T +Q+P +L + P Q H
Sbjct: 336 PLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPP--IQVPH 393
Query: 515 TGLLPQTMLITDTTNLSALASLT----PTKQV---FTSDTEASSESGLHTPASQATTL-- 565
+ P LS+L + T PT Q F + + +++ L +P+ A+T
Sbjct: 394 SLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPD 453
Query: 566 HVPSQDPASIQHLQPAHRLSASPTVS--SSSLVLYQSSDSSNGQSH 609
P Q P S+ P + S SP VS SS L ++ S+ SH
Sbjct: 454 SPPLQAPLSLP-ASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASH 498
Score = 45.4 bits (106), Expect = 2e-04
Identities = 57/223 (25%), Positives = 83/223 (37%), Gaps = 38/223 (17%)
Query: 290 PPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPLH 349
PP P P+L SP PP+ +P + P + +T + + P
Sbjct: 345 PPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQT----------IPPIQVPHS 394
Query: 350 QVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLP 409
SP+ P L + + ++ G P TL A HS SP Q ASL
Sbjct: 395 LTSPSLQAPPSPLALSSLQATTSLGSP-----TLQATHSFLTMSPRQTQ-------ASL- 441
Query: 410 GVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQ-FSQPL 468
P PAS P A + Q P ++ + S L T+ P+Q S
Sbjct: 442 ----TSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPL-TIHPLQALSSLA 496
Query: 469 HPSYQQPL----MPPVQSHVTQSPFMATMAQLQSPHALYSHKP 507
S Q PL MPP+++ + +P LQ+P A + P
Sbjct: 497 SHSPQAPLSSLIMPPLETQSSLAP-----PSLQTPPASLTTPP 534
Score = 37.0 bits (84), Expect = 0.055
Identities = 76/328 (23%), Positives = 116/328 (35%), Gaps = 25/328 (7%)
Query: 291 PGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPLHQ 350
P P PAL + GLP P LSP + P +P P S PL
Sbjct: 590 PPPQAPPALASPPLQGLPSPPLSP-----LATPPPQAPPXLALPPLQAPPSPPASPPLSP 644
Query: 351 VSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPG 410
++ T + + L+ + P PPV + + SP Q + P
Sbjct: 645 LA-TPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAP- 702
Query: 411 VMTIGPGEPAS--LGPTFTNTGASTLVIGLASTQA-QSVPVINSMGSSLT---TLQPVQF 464
+ + P PAS + P+ T + + Q S P M S T + P+
Sbjct: 703 PLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLA 762
Query: 465 SQPLH----PSYQQPLMPPVQSHVTQSPFMAT--MAQLQSPHALYSHKPEVAQYTHTGLL 518
+ PL P P+ P + P +AT + L SP A + P A ++ + L
Sbjct: 763 APPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASF---PGQAPFSPSASL 819
Query: 519 PQTMLITDTTNLSALASLTPTKQVFTSDTEASSESGLHTPASQA--TTLHVPSQDPASIQ 576
P + L T + + P QV S + + P + T++ P A
Sbjct: 820 PMSPLATPPPQAPPVLA-APLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAP 878
Query: 577 HLQPAHRLSASPTVSSSSLVLYQSSDSS 604
P S S T+S L + SS +S
Sbjct: 879 GPPPPPSRSPSSTLSGPDLAGHSSSATS 906
Score = 35.4 bits (80), Expect = 0.16
Identities = 52/199 (26%), Positives = 74/199 (37%), Gaps = 26/199 (13%)
Query: 287 SGPPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVST 346
+ PP P P A S PP + PS P S +A P + PL +
Sbjct: 681 ASPPVSPSATPPSQAPPSLAAPPLQVPPSPP-----ASPPMSPSATPPPQAPPPL---AA 732
Query: 347 PLHQVSPT-----GLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQ 401
P QV P+ + PS + L++A PP+ + + SP PQ
Sbjct: 733 PPLQVPPSPPASPPMSPSATPPPRVPPLLAA-----PPLQVPPSPPASLPMSPLAKPPPQ 787
Query: 402 NLIMASLPGVMTIGPGEPASL-GPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQ 460
+ P + + P PAS G + AS + LA+ Q+ PV+ L
Sbjct: 788 APPALATPPLQAL-PSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVL------AAPLL 840
Query: 461 PVQFSQPLHPSYQQPLMPP 479
V S P P+ Q P PP
Sbjct: 841 QVPPSPPASPTLQAPRRPP 859
Score = 35.0 bits (79), Expect = 0.21
Identities = 58/222 (26%), Positives = 75/222 (33%), Gaps = 22/222 (9%)
Query: 289 PPPGPGPGPALPAHSSPGLPP--PALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVST 346
PPP P ALP +P PP P LSP + + P S P V
Sbjct: 617 PPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSP-PPSPPVQA 675
Query: 347 PLH-----QVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQ 401
P VSP+ PS + S A + P PP S SP PQ
Sbjct: 676 PFSPPASPPVSPSATPPSQAPPSLAAPPLQVP--PSPPAS--------PPMSPSATPPPQ 725
Query: 402 NLIMASLPGVMTIGPGEPAS--LGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTL 459
+ P + + P PAS + P+ T ++ Q P S+ S
Sbjct: 726 APPPLAAP-PLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPA-SLPMSPLAK 783
Query: 460 QPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHA 501
P Q L Q L P S Q+PF + + SP A
Sbjct: 784 PPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLA 825
Score = 34.3 bits (77), Expect = 0.36
Identities = 40/151 (26%), Positives = 52/151 (34%), Gaps = 18/151 (11%)
Query: 281 LAMDTYSGPPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGP 340
LA PP P P P P PPAL+ + + + A S+ P
Sbjct: 761 LAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLP 820
Query: 341 LVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVS-TLTALHSLEQTSPGLNQQ 399
+ ++TP Q P P LL P PP S TL A P +
Sbjct: 821 MSPLATPPPQAPPVLAAP---LLQVP---------PSPPASPTLQAPRRPPTPGPDTSVS 868
Query: 400 PQNLIMASLPGVMTIGPGEPASLGPTFTNTG 430
L +A P GP P S P+ T +G
Sbjct: 869 GPRLTLALAP-----GPPPPPSRSPSSTLSG 894
>gi|19923597 Sin3A-associated protein, 130kDa isoform b [Homo
sapiens]
Length = 1048
Score = 52.4 bits (124), Expect = 1e-06
Identities = 74/292 (25%), Positives = 110/292 (37%), Gaps = 34/292 (11%)
Query: 293 PGPGPALPAHSSPGLPPPALS-PSKVHGVRYGQPATSETAEVPSSSGGPLVTVS------ 345
P P P +P+ PP LS P KV G Q + + +P +S P+ T+S
Sbjct: 143 PPPKPTMPSRPIAPAPPSTLSLPPKVPG----QVTVTMESSIPQASAIPVATISGQQGHP 198
Query: 346 TPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIM 405
+ LH + T ++ S + + LP + A+ S + + L Q
Sbjct: 199 SNLHHIMTTNVQMSIIRSNAPGPPLHIGASHLPRGAAAAAVMSSSKVTTVLRPTSQ---- 254
Query: 406 ASLPGVMTIGPG------EPASLGPTFTNTGA--STLVIGLASTQAQSVPVINSMGSSLT 457
LP T P +P P T + A +V +++T+AQS PVI + + T
Sbjct: 255 --LPNAATAQPAVQHIIHQPIQSRPPVTTSNAIPPAVVATVSATRAQS-PVITTTAAHAT 311
Query: 458 TLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGL 517
S+P P QS + T L S AL + K Q HT +
Sbjct: 312 DSA---LSRPTLSIQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPK----QQLHT-M 363
Query: 518 LPQTMLITDTTNLSALASLTPTKQVFTSDTEASSESGLHTPASQATTLHVPS 569
+T+ T T +A + S T A S S P S T+ VPS
Sbjct: 364 AQKTIFSTGTPVAAATVAPILATNTIPSATTAGSVSHTQAPTSTIVTMTVPS 415
>gi|225579127 Sin3A-associated protein, 130kDa isoform a [Homo
sapiens]
Length = 1083
Score = 52.4 bits (124), Expect = 1e-06
Identities = 74/292 (25%), Positives = 110/292 (37%), Gaps = 34/292 (11%)
Query: 293 PGPGPALPAHSSPGLPPPALS-PSKVHGVRYGQPATSETAEVPSSSGGPLVTVS------ 345
P P P +P+ PP LS P KV G Q + + +P +S P+ T+S
Sbjct: 143 PPPKPTMPSRPIAPAPPSTLSLPPKVPG----QVTVTMESSIPQASAIPVATISGQQGHP 198
Query: 346 TPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIM 405
+ LH + T ++ S + + LP + A+ S + + L Q
Sbjct: 199 SNLHHIMTTNVQMSIIRSNAPGPPLHIGASHLPRGAAAAAVMSSSKVTTVLRPTSQ---- 254
Query: 406 ASLPGVMTIGPG------EPASLGPTFTNTGA--STLVIGLASTQAQSVPVINSMGSSLT 457
LP T P +P P T + A +V +++T+AQS PVI + + T
Sbjct: 255 --LPNAATAQPAVQHIIHQPIQSRPPVTTSNAIPPAVVATVSATRAQS-PVITTTAAHAT 311
Query: 458 TLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGL 517
S+P P QS + T L S AL + K Q HT +
Sbjct: 312 DSA---LSRPTLSIQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPK----QQLHT-M 363
Query: 518 LPQTMLITDTTNLSALASLTPTKQVFTSDTEASSESGLHTPASQATTLHVPS 569
+T+ T T +A + S T A S S P S T+ VPS
Sbjct: 364 AQKTIFSTGTPVAAATVAPILATNTIPSATTAGSVSHTQAPTSTIVTMTVPS 415
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 52.0 bits (123), Expect = 2e-06
Identities = 84/365 (23%), Positives = 131/365 (35%), Gaps = 36/365 (9%)
Query: 289 PPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPL 348
P PG ALPA S P A S + + G T S + P T+ST
Sbjct: 3772 PFSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTR-----LSQTTTPTATMSTAT 3826
Query: 349 HQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLE-------------QTSPG 395
+P S ++L+T A A G P ST H+ + +SPG
Sbjct: 3827 PSSTPETAHTS-TVLTTTATTTRATGSVATPSSTPGTAHTTKVPTTTTTGFTVTPSSSPG 3885
Query: 396 LNQQPQNLIMASLPGVMTIGPGEPASL-----GPTFTNTGASTLVIGLASTQAQSVPVIN 450
+ P I + + P+S+ PT T +T+ G +T + S
Sbjct: 3886 TARTPPVWISTTTTPTTSGSTVTPSSVPGTTHTPTVLTTTTTTVATGSMATPSSSTQTSG 3945
Query: 451 SMGSSLTTLQPV----QFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHK 506
+ S +TT + + P P+ PPV + +P + S +H
Sbjct: 3946 TPPSLITTATTITATGSTTNPSSTPGTTPI-PPVLTTTATTPAATSSTVTPSSALGTTHT 4004
Query: 507 PEVAQYTHT----GLLPQTMLITDTTNLSALASLTPTKQVFTSDTEASSESGLHTPASQA 562
P V T T L P + T SA + T + T S T +Q
Sbjct: 4005 PPVPNTTATTHGRSLSPSSPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQH 4064
Query: 563 TTLHVPSQDPASIQHLQPAHRLSASP-TVSSSSLVLYQSSDSSNGQSHLLPSN--HSVIE 619
+T + S P+S P + +P +++S ++ S S LLPS+ + I
Sbjct: 4065 STPALSSPHPSSRTTESPPSPGTTTPGHTTATSRTTATATPSKTRTSTLLPSSPTSAPIT 4124
Query: 620 TFIST 624
T ++T
Sbjct: 4125 TVVTT 4129
Score = 49.3 bits (116), Expect = 1e-05
Identities = 84/365 (23%), Positives = 128/365 (35%), Gaps = 36/365 (9%)
Query: 289 PPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPL 348
P PG ALPA S P A S + + G T S + P T+ST
Sbjct: 3215 PSSSPGTATALPALRSTATTPTATSVTAIPSSSLGTAWTR-----LSQTTTPTATMSTAT 3269
Query: 349 HQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLE---QTSPGLNQQPQNLIM 405
+P + S ++L+T A G P ST H+ + T+ G P +
Sbjct: 3270 PSSTPETVHTS-TVLTTTTTTTRATGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPG 3328
Query: 406 ASL-PGVMTIGPGEPASLGPTFT--------------NTGASTLVIGLASTQAQSVPVIN 450
+L P V P + G T T T +T+ G +T + S
Sbjct: 3329 TALTPPVWISTTTTPTTRGSTVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSSTQTSG 3388
Query: 451 SMGSSLTTLQPV----QFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHK 506
+ S TT + + P P+ PPV + +P + S +H
Sbjct: 3389 TPPSLTTTATTITATGSTTNPSSTPGTTPI-PPVLTTTATTPAATSSTVTPSSALGTTHT 3447
Query: 507 PEVAQYTHT----GLLPQTMLITDTTNLSALASLTPTKQVFTSDTEASSESGLHTPASQA 562
P V T T L P + T SA + + T + T S T +Q
Sbjct: 3448 PPVPNTTATTHGRSLPPSSPHTVRTAWTSATSGILGTTHITEPSTVTSHTPAATTSTTQH 3507
Query: 563 TTLHVPSQDPASIQHLQPAHRLSASP-TVSSSSLVLYQSSDSSNGQSHLLPSN--HSVIE 619
+T + S P+S P + +P +S ++ S S LLPS+ + I
Sbjct: 3508 STPALSSPHPSSRTTESPPSPGTTTPGHTRGTSRTTATATPSKTRTSTLLPSSPTSAPIT 3567
Query: 620 TFIST 624
T ++T
Sbjct: 3568 TVVTT 3572
Score = 48.9 bits (115), Expect = 1e-05
Identities = 79/320 (24%), Positives = 114/320 (35%), Gaps = 50/320 (15%)
Query: 289 PPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPL 348
P PG ALPA S P A S + + G T S + P T+ST
Sbjct: 2515 PFSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTR-----LSQTTTPTATMSTAT 2569
Query: 349 HQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHS---LEQTSPGLNQQPQNLIM 405
+P + S ++L+T A A G P ST H+ L T+ G P
Sbjct: 2570 PSSTPETVHTS-TVLTTTATTTGATGSVATPSSTPGTAHTTKVLTTTTTGFTATP----- 2623
Query: 406 ASLPGVMTIGP------GEPASLG--------------PTFTNTGASTLVIGLASTQAQS 445
+S PG P P + G PT T +T+ G +T + S
Sbjct: 2624 SSSPGTARTLPVWISTTTTPTTRGSTVTPSSIPGTTHTPTVLTTTTTTVATGSMATPSSS 2683
Query: 446 VPVINSMGSSLTTLQPV----QFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHA 501
+ S TT + + P P+ PPV + +P AT + + A
Sbjct: 2684 TQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPI-PPVLTTTATTP-AATSSTVTPSSA 2741
Query: 502 LYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDTEASSESGLHTPASQ 561
L + THT +P T T +LS + T + +TS T + + H
Sbjct: 2742 LGT--------THTPPVPNTTATTHGRSLSPSSPHT-VRTAWTSATSGTLGT-THITEPS 2791
Query: 562 ATTLHVPSQDPASIQHLQPA 581
T H P+ + QH PA
Sbjct: 2792 TGTSHTPAATTGTTQHSTPA 2811
Score = 46.6 bits (109), Expect = 7e-05
Identities = 74/348 (21%), Positives = 121/348 (34%), Gaps = 24/348 (6%)
Query: 289 PPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPL 348
P PG ALPA S P A S + + G T S + P T+ST
Sbjct: 4500 PSSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTR-----LSQTTTPTATMSTAT 4554
Query: 349 HQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLE---QTSPGLNQQPQNLIM 405
+P + S ++L+ A A G P ST H+ + T+ G P
Sbjct: 4555 PSSTPETVHTS-TVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTATP----- 4608
Query: 406 ASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFS 465
+S PG P + T T T + G T + ++ TT V
Sbjct: 4609 SSSPGTALT---PPVWISTTTTPTTTTPTTSGSTVTPSSIPGTTHTARVLTTTTTTVATG 4665
Query: 466 QPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLIT 525
PS S T + + +P + P T T P T
Sbjct: 4666 SMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPITPVLTSTATTPAA---T 4722
Query: 526 DTTNLSALASLTPTKQVFTSDTEASSESGLHTPASQA---TTLHVPSQDPASIQHLQPAH 582
+ S+ + T T + T S + TP + TT VP+Q + + H
Sbjct: 4723 SSKATSSSSPRTATTLPVLTSTATKSTATSFTPIPSSTLWTTWTVPAQTTTPMSTMSTIH 4782
Query: 583 RLSASPTVSSSSLVLYQSSDSSNGQSHLLPSNHSVIETFISTQMASSS 630
S++P + +S VL ++ + + + ++ T I T++ +++
Sbjct: 4783 -TSSTPETTHTSTVLTTTATMTRATNSTATPSSTLGTTRILTELTTTA 4829
Score = 46.2 bits (108), Expect = 9e-05
Identities = 84/356 (23%), Positives = 124/356 (34%), Gaps = 47/356 (13%)
Query: 289 PPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPL 348
P PG ALPA S P A S + + G T S + P T+ST
Sbjct: 1958 PSSSPGTATALPALRSTATTPTATSVTPIPSSSLGTTWTR-----LSQTTTPTATMSTAT 2012
Query: 349 HQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLE---QTSPGLNQQPQNLIM 405
+P S ++L+ A A G P ST H+ + T+ G P +
Sbjct: 2013 PSSTPETAHTS-TVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPG 2071
Query: 406 ASL-PGVMTIGPGEPASLGPTFT--------------NTGASTLVIGLASTQAQSVPVIN 450
+L P V P + G T T T +T+ G +T + S
Sbjct: 2072 TALTPPVWISTTTTPTTRGSTVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSSTQTSG 2131
Query: 451 SMGSSLTTLQPV----QFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHK 506
+ S TT + + P P+ PPV + +P + S +H
Sbjct: 2132 TPPSLTTTATTITATGSTTNPSSTPGTTPI-PPVLTTTATTPAATSNTVTPSSALGTTHT 2190
Query: 507 PEVAQ---YTHTGLLP-------------QTMLITDTTNLSALASLTPTKQVFTSDTEAS 550
P V TH LP T I TT+++ +++T T+ T
Sbjct: 2191 PPVPNTMATTHGRSLPPSSPHTVRTAWTSATSGILGTTHITEPSTVTSHTLAATTGTTQH 2250
Query: 551 SESGLHTP-ASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSS-SLVLYQSSDSS 604
S L +P S TT PS + H R +A+ T S + + L SS +S
Sbjct: 2251 STPALSSPHPSSRTTESPPSPGTTTPGHTTATSRTTATATPSKTRTSTLLPSSPTS 2306
Score = 42.7 bits (99), Expect = 0.001
Identities = 67/325 (20%), Positives = 117/325 (36%), Gaps = 20/325 (6%)
Query: 296 GPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPLHQVSPTG 355
G S+PG PS V +T+ + +++G P V+ + V+ +
Sbjct: 3710 GSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSK 3769
Query: 356 LEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVMTIG 415
P S + A + P ++ TA+ S + A++
Sbjct: 3770 ATPFSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSS 3829
Query: 416 PGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQP 475
E A T T +T G +T + + ++ TT + P +
Sbjct: 3830 TPETAHTSTVLTTTATTTRATGSVATPSSTPGTAHTTKVPTTTTTGFTVTPSSSPGTAR- 3888
Query: 476 LMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALAS 535
PPV T +P T +P + V THT T+L T TT ++ +
Sbjct: 3889 -TPPVWISTTTTP--TTSGSTVTPSS-------VPGTTHT----PTVLTTTTTTVATGSM 3934
Query: 536 LTPTKQVFTSDTEASSESGLHTPASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSSL 595
TP+ TS T S + T + +T + PS P + + P +A+ ++SS
Sbjct: 3935 ATPSSSTQTSGTPPSLITTATTITATGSTTN-PSSTPGTTP-IPPVLTTTATTPAATSST 3992
Query: 596 VLYQSSDSSNGQSHLLPSNHSVIET 620
V + S+ G +H P ++ T
Sbjct: 3993 V---TPSSALGTTHTPPVPNTTATT 4014
Score = 42.4 bits (98), Expect = 0.001
Identities = 64/275 (23%), Positives = 95/275 (34%), Gaps = 20/275 (7%)
Query: 310 PALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTP-----LHQVS-------PTGLE 357
P +PS G + + TA +S+G STP L + S PTG
Sbjct: 4410 PTATPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTTWILTEPSTTATVTVPTGST 4469
Query: 358 PSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPG-LNQQPQNLIMASLPGVMTIGP 416
+ S ST+A + T+T+ + +SPG P A+ P +
Sbjct: 4470 ATAS--STQATAGTPHVSTTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSFTA 4527
Query: 417 GEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQPL 476
+SLG T+T +T ST S S T L + S P
Sbjct: 4528 IPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETVHTS--TVLTATATTTGATGSVATPS 4585
Query: 477 MPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLIT---DTTNLSAL 533
P +H T+ P T +P + + T P T T T S++
Sbjct: 4586 STPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSI 4645
Query: 534 ASLTPTKQVFTSDTEASSESGLHTPASQATTLHVP 568
T T +V T+ T + + TP+S T P
Sbjct: 4646 PGTTHTARVLTTTTTTVATGSMATPSSSTQTSGTP 4680
Score = 40.4 bits (93), Expect = 0.005
Identities = 71/310 (22%), Positives = 113/310 (36%), Gaps = 20/310 (6%)
Query: 296 GPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPLHQVSPTG 355
G S+PG PS V +T+ + +++G P V+ + V+ +
Sbjct: 4438 GSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSK 4497
Query: 356 LEPSHSLLSTEAKLVSAAGGPLPPVSTLTAL--HSLEQTSPGLNQ--QPQNLIMASLPGV 411
PS S + A + P ++ TA+ SL T L+Q P + + P
Sbjct: 4498 ATPSSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSS 4557
Query: 412 MTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQPLHPS 471
L T T TGA+ V +ST + + + T F+ S
Sbjct: 4558 TPETVHTSTVLTATATTTGATGSVATPSSTPG------TAHTTKVPTTTTTGFTATPSSS 4611
Query: 472 YQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLS 531
L PPV T +P T S S + THT +L T TT ++
Sbjct: 4612 PGTALTPPVWISTTTTPTTTTPTTSGSTVTPSS----IPGTTHTA----RVLTTTTTTVA 4663
Query: 532 ALASLTPTKQVFTSDTEASSESGLHTPASQATTLHVPSQDPASIQHLQPAHRLSASPTVS 591
+ TP+ TS T S + T + +T + PS P + + P +A+ +
Sbjct: 4664 TGSMATPSSSTQTSGTPPSLTTTATTITATGSTTN-PSSTPGTTP-ITPVLTSTATTPAA 4721
Query: 592 SSSLVLYQSS 601
+SS SS
Sbjct: 4722 TSSKATSSSS 4731
Score = 38.9 bits (89), Expect = 0.015
Identities = 65/325 (20%), Positives = 116/325 (35%), Gaps = 20/325 (6%)
Query: 296 GPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPLHQVSPTG 355
G S+PG PS V +T+ + +++G P V+ + V+ +
Sbjct: 2453 GSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSK 2512
Query: 356 LEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVMTIG 415
P S + A + P ++ TA+ S + A++
Sbjct: 2513 ATPFSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSS 2572
Query: 416 PGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQP 475
E T T +T G +T + + ++ TT + P +
Sbjct: 2573 TPETVHTSTVLTTTATTTGATGSVATPSSTPGTAHTTKVLTTTTTGFTATPSSSPGTART 2632
Query: 476 LMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALAS 535
L PV T +P T +P + + THT T+L T TT ++ +
Sbjct: 2633 L--PVWISTTTTP--TTRGSTVTPSS-------IPGTTHT----PTVLTTTTTTVATGSM 2677
Query: 536 LTPTKQVFTSDTEASSESGLHTPASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSSL 595
TP+ TS T S + T + +T + PS P + + P +A+ ++SS
Sbjct: 2678 ATPSSSTQTSGTPPSLTTTATTITATGSTTN-PSSTPGTTP-IPPVLTTTATTPAATSST 2735
Query: 596 VLYQSSDSSNGQSHLLPSNHSVIET 620
V + S+ G +H P ++ T
Sbjct: 2736 V---TPSSALGTTHTPPVPNTTATT 2757
Score = 35.8 bits (81), Expect = 0.12
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 288 GPPPGPG--PGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPS---SSGGPL- 341
GP P PG P P+L A + P +P P + + + P+ TA + S SS GP+
Sbjct: 1436 GPSPAPGTSPQPSLSASTEPAVPTPTQTTATEKTTLWVTPSIRSTAALTSQTGSSSGPVT 1495
Query: 342 VTVSTP 347
VT S P
Sbjct: 1496 VTPSAP 1501
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 52.0 bits (123), Expect = 2e-06
Identities = 83/322 (25%), Positives = 113/322 (35%), Gaps = 60/322 (18%)
Query: 295 PGPALPA-HSSPGLPPP-ALSPSKVHGVRYGQPATSETAEV------PSSS------GGP 340
P P +P S P PPP A S S V G A +V PS S G P
Sbjct: 882 PTPGIPILQSVPSAPPPKAQSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRGGGAGQP 941
Query: 341 LVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQP 400
L VS P G +P ++ VS G +PP+S T PG QP
Sbjct: 942 LPLVSPPFSVPVQNGAQPPSKIIQLTPVPVSTPSGLVPPLSPATL--------PGPTSQP 993
Query: 401 QNLIMASLPGVMTI----GPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSL 456
Q +++ S + + G P P + G T S +S+
Sbjct: 994 QKVLLPSSTRITYVQSAGGHALPLGTSPASSQAGTVT-----------SYGPTSSVALGF 1042
Query: 457 TTLQP--VQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSP-----HALYSHKP-- 507
T+L P F QPL + Q PL+ P Q V+ P +P A YS P
Sbjct: 1043 TSLGPSGPAFVQPLLSAGQAPLLAPGQVGVSPVPSPQLPPACAAPGGPVITAFYSGSPAP 1102
Query: 508 -EVAQYTHTGLLPQTMLITDTTNLS------------ALASLTPT-KQVFTSDTEASSES 553
A P +++ T T+ + A A+ TP F S T S
Sbjct: 1103 TSSAPLAQPSQAPPSLVYTVATSTTPPAATILPKGPPAPATATPAPTSPFPSATAGSMTY 1162
Query: 554 GLHTPASQATTLHVPSQDPASI 575
L P +Q + P + A+I
Sbjct: 1163 SLVAPKAQRPSPKAPQKVKAAI 1184
Score = 32.0 bits (71), Expect = 1.8
Identities = 54/229 (23%), Positives = 81/229 (35%), Gaps = 32/229 (13%)
Query: 289 PPPGPGPGPALPAHSSPGLP-PPAL----SPSKVHGVRYGQPATSETAEVPSSSGGPLVT 343
PPP GPA P+ ++ LP PA P V G+ P S A PS G L T
Sbjct: 573 PPPPGAGGPATPSKATRFLPMDPATFRRKRPESVGGLE--PPGPSVIAAPPSGGGNILQT 630
Query: 344 VSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNL 403
+ P ++ G + + + A G P P+S A P ++ P +
Sbjct: 631 LVLPPNKEEQEG---GGARVPSAPAPSLAYGAPAAPLSRPAATMVTNVVRP-VSSTPVPI 686
Query: 404 IMASLP--GVMTIGPGEPA----SLGPTFTNTGASTLVIGLASTQAQSV----------- 446
P G P + A +G G S L + L + +S
Sbjct: 687 ASKPFPTSGRAEASPNDTAGARTEMGTGSRVPGGSPLGVSLVYSDKKSAAATSPAPHLVA 746
Query: 447 -PVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMA 494
P++ ++G + T+ + P Y P P VQ +P T A
Sbjct: 747 GPLLGTVGKAPATVTNLLVGT---PGYGAPAPPAVQFIAQGAPGGGTTA 792
Score = 30.0 bits (66), Expect = 6.7
Identities = 47/202 (23%), Positives = 69/202 (34%), Gaps = 33/202 (16%)
Query: 289 PPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPL 348
P P P +P S LP P P KV P+++ V S+ G L
Sbjct: 968 PVPVSTPSGLVPPLSPATLPGPTSQPQKVL-----LPSSTRITYVQSAGGHAL------- 1015
Query: 349 HQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASL 408
P G P+ S++A V++ G P S SL + P Q + A L
Sbjct: 1016 ----PLGTSPA----SSQAGTVTSYG---PTSSVALGFTSLGPSGPAFVQPLLSAGQAPL 1064
Query: 409 --PGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQ 466
PG + + P L P G + + + A + SS QP Q
Sbjct: 1065 LAPGQVGVSPVPSPQLPPACAAPGGPVITAFYSGSPAPT--------SSAPLAQPSQAPP 1116
Query: 467 PLHPSYQQPLMPPVQSHVTQSP 488
L + PP + + + P
Sbjct: 1117 SLVYTVATSTTPPAATILPKGP 1138
>gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens]
Length = 2382
Score = 51.6 bits (122), Expect = 2e-06
Identities = 100/426 (23%), Positives = 156/426 (36%), Gaps = 76/426 (17%)
Query: 253 GLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDTYSGPPPGPGPGPALPAHSSPGLPPPAL 312
G GS++ TE RV + + +H+ A T G PG P G+ PP+
Sbjct: 658 GQGSSVFTESRVSS---QQTVSYGSQHEQAHST--GTVPGHIPSTVQAQSQPHGVYPPS- 711
Query: 313 SPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSA 372
S G GQP++S V SS + Q +P +SL T +
Sbjct: 712 --SVAQGQSQGQPSSSSLTGVSSSQPIQHPQQQQGIQQTAPPQQTVQYSLSQTSTSSEAT 769
Query: 373 AGGP---------LPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGE----- 418
P LP VS L + Q P + +PQ + +A+ P V+ + G
Sbjct: 770 TAQPVSQPQAPQVLPQVSAGKQL-PVSQPVPTIQGEPQ-IPVATQPSVVPVHSGAHFLPV 827
Query: 419 ----PASLGPTF--------------TNTGASTLVIGLASTQAQSVPVINSMGSS----- 455
P L P + TG S+L I +A+ Q + + S ++
Sbjct: 828 GQPLPTPLLPQYPVSQIPISTPHVSTAQTGFSSLPITMAAGITQPLLTLASSATTAAIPG 887
Query: 456 LTTLQPVQFSQPLHPSYQQP-------LMPPVQSH-VTQSPFMATMAQLQSPHALYSHKP 507
++T+ P Q L P Q P L P VQS + + A L S LY P
Sbjct: 888 VSTVVPSQLPTLLQPVTQLPSQVHPQLLQPAVQSMGIPANLGQAAEVPLSSGDVLYQGFP 947
Query: 508 EVAQYTHTG---LLPQTMLITDTTNLSALASLTPTKQV-----FTSDTEASSESGLHTPA 559
+ G + P + + + + + L+ PT+ + F + + ES L P
Sbjct: 948 PRLPPQYPGDSNIAPSSNVASVCIHSTVLSPPMPTEVLATPGYFPTVVQPYVESNLLVPM 1007
Query: 560 SQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSSLVLYQSSDSSNGQSHLLPSNHSVIE 619
+Q QP L+ +PT SS VL +S+ G S + P+ +
Sbjct: 1008 GGVG---------GQVQVSQPGGSLAQAPTTSSQQAVL----ESTQGVSQVAPAEPVAVA 1054
Query: 620 TFISTQ 625
+TQ
Sbjct: 1055 QTQATQ 1060
Score = 43.9 bits (102), Expect = 5e-04
Identities = 70/287 (24%), Positives = 116/287 (40%), Gaps = 48/287 (16%)
Query: 292 GPGPGPALPAHSSPGLP--PPALSPSKVHGVRYGQPATSE-TAEVPSSSGGPLVTVSTPL 348
GP P +H+ P P PP LS G P T+ TA VP++S P ++ +
Sbjct: 1318 GPNTAPPNFSHTGPTFPVVPPFLSSIA------GVPTTAAATAPVPATSSPPNDISTSVI 1371
Query: 349 HQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASL 408
E + ++T +V++ G P+PPVS L S+ + ++
Sbjct: 1372 QSEVTVPTEEGIAGVATSTGVVTSGGLPIPPVSESPVLSSVVSS-------------ITI 1418
Query: 409 PGVMTIGPGEPASLGPTFTN--TGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQ 466
P V++I P+ PT T+ +ST + + A S S G S T P
Sbjct: 1419 PAVVSISTTSPSLQVPTSTSEIVVSSTALYPSVTVSATSA----SAGGSTATPGP---KP 1471
Query: 467 PLHPSYQQPLMPPVQSHVTQ----SPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTM 522
P S Q V + +T + F +T +QL +++ T T L +T+
Sbjct: 1472 PAVVSQQAAGSTTVGATLTSVSTTTSFPSTASQLSI---------QLSSSTSTPTLAETV 1522
Query: 523 LITDTTNLSALASLTPTKQVFTSDTEASSES---GLHTPASQATTLH 566
+++ +L + + T F+ +SS S G+ + SQ LH
Sbjct: 1523 VVS-AHSLDKTSHSSTTGLAFSLSAPSSSSSPGAGVSSYISQPGGLH 1568
Score = 34.3 bits (77), Expect = 0.36
Identities = 71/300 (23%), Positives = 113/300 (37%), Gaps = 63/300 (21%)
Query: 303 SSPGLPPPALSPSKVHG---VRYGQPATSETAEVPSSSGGPLVTVS--TPLHQVSPTGLE 357
++PG PPA+ + G V + S T PS++ + +S T ++ T +
Sbjct: 1465 ATPGPKPPAVVSQQAAGSTTVGATLTSVSTTTSFPSTASQLSIQLSSSTSTPTLAETVVV 1524
Query: 358 PSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLN-----QQPQNLIMASLPGVM 412
+HSL T + L S+ +SPG QP L +P V+
Sbjct: 1525 SAHSLDKTSHSSTTGLAFSLSAPSS--------SSSPGAGVSSYISQPGGLHPLVIPSVI 1576
Query: 413 TIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPV----QFSQPL 468
P P + GPT S P++ + S +QPV Q L
Sbjct: 1577 ASTPILPQAAGPT-------------------STPLLPQVPSIPPLVQPVANVPAVQQTL 1617
Query: 469 HPSYQQPLMPPVQSHVTQSPFMATMAQLQSP------------HALYS-HKPEVAQYTHT 515
S QP + P Q H T P + + Q ++P +L+S H AQ+
Sbjct: 1618 IHSQPQPALLPNQPH-THCPEVDSDTQPKAPGIDDIKTLEEKLRSLFSEHSSSGAQHASV 1676
Query: 516 GLLPQTMLITDTTNLSAL--ASLTPTKQVFTSDTEA---SSESGLHTPASQATTLHVPSQ 570
L +T L+ ++T + ++ P+K + TS T + L T A T + P Q
Sbjct: 1677 SL--ETSLVIESTVTPGIPTTAVAPSK-LLTSTTSTCLPPTNLPLGTVALPVTPVVTPGQ 1733
>gi|239752490 PREDICTED: similar to Mucin-12 [Homo sapiens]
Length = 456
Score = 50.4 bits (119), Expect = 5e-06
Identities = 91/376 (24%), Positives = 135/376 (35%), Gaps = 65/376 (17%)
Query: 282 AMDTYSGPPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATS------------- 328
A T SGP + +HSSPG ALSP + +GQ +T+
Sbjct: 92 ASTTTSGPSQ-----ESTTSHSSPGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLF 146
Query: 329 -----------ETAEVPSSSGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGP- 376
+ V SS+G P T+S P SP GL+ + T P
Sbjct: 147 PDSTTSSGIVEASTRVHSSTGSPRTTLS-PASSTSP-GLQGESTAFQTHPASTHTTPSPP 204
Query: 377 ---LPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGAST 433
PV T H ++P P + + TI P + G T ++ ++T
Sbjct: 205 STATAPVEESTTYHRSPGSTP-TTHFPASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTT 263
Query: 434 LVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATM 493
+ S+ + S P GS+ TT + P + P SH +Q AT+
Sbjct: 264 SGVSEESSTSHSQP-----GSTHTT------AFPDSTTTSGLSQEPTTSHSSQGSTEATL 312
Query: 494 AQLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDTEASSES 553
SP + EV+ H+ P + T TT+ S AS T + S T SS
Sbjct: 313 DTTPSPPGTTAAPVEVSTTYHS--RPSS---TPTTHFS--ASSTTLGRSEESTTVHSSPG 365
Query: 554 GLHTPASQATTLHVPSQDPASIQHLQPAH---RLSASPTVSSSSLVLYQSSDSSNGQSH- 609
T A +T + ++ + P LS + T SS +S S G +H
Sbjct: 366 STETTALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPASTTSSGVSEESTTSHSRPGSTHT 425
Query: 610 -------LLPSNHSVI 618
+P HS+I
Sbjct: 426 TAFPGSTTMPGYHSII 441
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 50.4 bits (119), Expect = 5e-06
Identities = 77/306 (25%), Positives = 113/306 (36%), Gaps = 55/306 (17%)
Query: 290 PPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPL----VTVS 345
P G P P+ +P LP P +PS G P S+ P + P+ + +
Sbjct: 190 PTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQA 249
Query: 346 TPLH-QVSPTGLEPSH-SLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNL 403
LH Q P+ P H S L +AG P P LH Q PG P +L
Sbjct: 250 PALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHG--QGPPG----PHSL 303
Query: 404 IMASLPGVMTIGPGEPASLG-PTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPV 462
G + PG P G P + G + L A+ + + + S+L + QP
Sbjct: 304 ----QAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPP 359
Query: 463 QFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTM 522
+ QPL P+ PL P H+ P + QL +P A + H P
Sbjct: 360 R-EQPLPPA---PLAMP---HIKPPP-TTPIPQLPAPQA-HKHPPH-------------- 396
Query: 523 LITDTTNLSALASLTPTKQVFTSDTEASSESGLHTPASQATTLHVPSQDPASIQHLQPAH 582
++ + S A+L P + P S +T H PS P +Q + +
Sbjct: 397 -LSGPSPFSMNANLPPPPAL--------------KPLSSLSTHHPPSAHPPPLQLMPQSQ 441
Query: 583 RLSASP 588
L +SP
Sbjct: 442 PLPSSP 447
Score = 35.8 bits (81), Expect = 0.12
Identities = 76/289 (26%), Positives = 99/289 (34%), Gaps = 46/289 (15%)
Query: 289 PPPGPGPGPAL-PAHSSPGLP-PPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVST 346
PPP P P P L P S G P P+ + +HG G P S GPL+
Sbjct: 262 PPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHG--QGPPGPH------SLQAGPLLQHPG 313
Query: 347 PLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVS-TLTALHSLEQTSPGLNQQPQNLIM 405
P P GL P S +A L ++ P S L A S Q+ +QP
Sbjct: 314 P---PQPFGLPPQAS--QGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQP----- 363
Query: 406 ASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQ------SVPVINSMGSSL--- 456
LP PA L +T + L + QA S P SM ++L
Sbjct: 364 --LP---------PAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPP 412
Query: 457 TTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTG 516
L+P+ HP P PP+Q P ++ AQ + P A + TG
Sbjct: 413 PALKPLSSLSTHHPPSAHP--PPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTG 470
Query: 517 L---LPQTMLITDTTNLSALASLTPTKQVFTSDTEASSESGLHTPASQA 562
L PQ +TP TS A + P S A
Sbjct: 471 LHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGA 519
Score = 34.3 bits (77), Expect = 0.36
Identities = 33/125 (26%), Positives = 42/125 (33%), Gaps = 20/125 (16%)
Query: 282 AMDTYSGPPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGG-- 339
+M+ PPP P +L H P PP L + QP S A+ P +
Sbjct: 404 SMNANLPPPPALKPLSSLSTHHPPSAHPPPLQL-----MPQSQPLPSSPAQPPGLTQSQN 458
Query: 340 ----PLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPG 395
P T LHQV+P H + GGP P S PG
Sbjct: 459 LPPPPASHPPTGLHQVAPQPPFAQHPFV---------PGGPPPITPPTCPSTSTPPAGPG 509
Query: 396 LNQQP 400
+ QP
Sbjct: 510 TSAQP 514
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 50.4 bits (119), Expect = 5e-06
Identities = 77/306 (25%), Positives = 113/306 (36%), Gaps = 55/306 (17%)
Query: 290 PPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPL----VTVS 345
P G P P+ +P LP P +PS G P S+ P + P+ + +
Sbjct: 744 PTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQA 803
Query: 346 TPLH-QVSPTGLEPSH-SLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNL 403
LH Q P+ P H S L +AG P P LH Q PG P +L
Sbjct: 804 PALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHG--QGPPG----PHSL 857
Query: 404 IMASLPGVMTIGPGEPASLG-PTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPV 462
G + PG P G P + G + L A+ + + + S+L + QP
Sbjct: 858 ----QAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPP 913
Query: 463 QFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTM 522
+ QPL P+ PL P H+ P + QL +P A + H P
Sbjct: 914 R-EQPLPPA---PLAMP---HIKPPP-TTPIPQLPAPQA-HKHPPH-------------- 950
Query: 523 LITDTTNLSALASLTPTKQVFTSDTEASSESGLHTPASQATTLHVPSQDPASIQHLQPAH 582
++ + S A+L P + P S +T H PS P +Q + +
Sbjct: 951 -LSGPSPFSMNANLPPPPAL--------------KPLSSLSTHHPPSAHPPPLQLMPQSQ 995
Query: 583 RLSASP 588
L +SP
Sbjct: 996 PLPSSP 1001
Score = 35.8 bits (81), Expect = 0.12
Identities = 76/289 (26%), Positives = 99/289 (34%), Gaps = 46/289 (15%)
Query: 289 PPPGPGPGPAL-PAHSSPGLP-PPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVST 346
PPP P P P L P S G P P+ + +HG G P S GPL+
Sbjct: 816 PPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHG--QGPPGPH------SLQAGPLLQHPG 867
Query: 347 PLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVS-TLTALHSLEQTSPGLNQQPQNLIM 405
P P GL P S +A L ++ P S L A S Q+ +QP
Sbjct: 868 P---PQPFGLPPQAS--QGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQP----- 917
Query: 406 ASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQ------SVPVINSMGSSL--- 456
LP PA L +T + L + QA S P SM ++L
Sbjct: 918 --LP---------PAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPP 966
Query: 457 TTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTG 516
L+P+ HP P PP+Q P ++ AQ + P A + TG
Sbjct: 967 PALKPLSSLSTHHPPSAHP--PPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTG 1024
Query: 517 L---LPQTMLITDTTNLSALASLTPTKQVFTSDTEASSESGLHTPASQA 562
L PQ +TP TS A + P S A
Sbjct: 1025 LHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGA 1073
Score = 34.3 bits (77), Expect = 0.36
Identities = 33/125 (26%), Positives = 42/125 (33%), Gaps = 20/125 (16%)
Query: 282 AMDTYSGPPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGG-- 339
+M+ PPP P +L H P PP L + QP S A+ P +
Sbjct: 958 SMNANLPPPPALKPLSSLSTHHPPSAHPPPLQL-----MPQSQPLPSSPAQPPGLTQSQN 1012
Query: 340 ----PLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPG 395
P T LHQV+P H + GGP P S PG
Sbjct: 1013 LPPPPASHPPTGLHQVAPQPPFAQHPFV---------PGGPPPITPPTCPSTSTPPAGPG 1063
Query: 396 LNQQP 400
+ QP
Sbjct: 1064 TSAQP 1068
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 50.4 bits (119), Expect = 5e-06
Identities = 77/306 (25%), Positives = 113/306 (36%), Gaps = 55/306 (17%)
Query: 290 PPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPL----VTVS 345
P G P P+ +P LP P +PS G P S+ P + P+ + +
Sbjct: 744 PTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQA 803
Query: 346 TPLH-QVSPTGLEPSH-SLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNL 403
LH Q P+ P H S L +AG P P LH Q PG P +L
Sbjct: 804 PALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHG--QGPPG----PHSL 857
Query: 404 IMASLPGVMTIGPGEPASLG-PTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPV 462
G + PG P G P + G + L A+ + + + S+L + QP
Sbjct: 858 ----QAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPP 913
Query: 463 QFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTM 522
+ QPL P+ PL P H+ P + QL +P A + H P
Sbjct: 914 R-EQPLPPA---PLAMP---HIKPPP-TTPIPQLPAPQA-HKHPPH-------------- 950
Query: 523 LITDTTNLSALASLTPTKQVFTSDTEASSESGLHTPASQATTLHVPSQDPASIQHLQPAH 582
++ + S A+L P + P S +T H PS P +Q + +
Sbjct: 951 -LSGPSPFSMNANLPPPPAL--------------KPLSSLSTHHPPSAHPPPLQLMPQSQ 995
Query: 583 RLSASP 588
L +SP
Sbjct: 996 PLPSSP 1001
Score = 35.8 bits (81), Expect = 0.12
Identities = 76/289 (26%), Positives = 99/289 (34%), Gaps = 46/289 (15%)
Query: 289 PPPGPGPGPAL-PAHSSPGLP-PPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVST 346
PPP P P P L P S G P P+ + +HG G P S GPL+
Sbjct: 816 PPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHG--QGPPGPH------SLQAGPLLQHPG 867
Query: 347 PLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVS-TLTALHSLEQTSPGLNQQPQNLIM 405
P P GL P S +A L ++ P S L A S Q+ +QP
Sbjct: 868 P---PQPFGLPPQAS--QGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQP----- 917
Query: 406 ASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQ------SVPVINSMGSSL--- 456
LP PA L +T + L + QA S P SM ++L
Sbjct: 918 --LP---------PAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPP 966
Query: 457 TTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTG 516
L+P+ HP P PP+Q P ++ AQ + P A + TG
Sbjct: 967 PALKPLSSLSTHHPPSAHP--PPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTG 1024
Query: 517 L---LPQTMLITDTTNLSALASLTPTKQVFTSDTEASSESGLHTPASQA 562
L PQ +TP TS A + P S A
Sbjct: 1025 LHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGA 1073
Score = 34.3 bits (77), Expect = 0.36
Identities = 33/125 (26%), Positives = 42/125 (33%), Gaps = 20/125 (16%)
Query: 282 AMDTYSGPPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGG-- 339
+M+ PPP P +L H P PP L + QP S A+ P +
Sbjct: 958 SMNANLPPPPALKPLSSLSTHHPPSAHPPPLQL-----MPQSQPLPSSPAQPPGLTQSQN 1012
Query: 340 ----PLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPG 395
P T LHQV+P H + GGP P S PG
Sbjct: 1013 LPPPPASHPPTGLHQVAPQPPFAQHPFV---------PGGPPPITPPTCPSTSTPPAGPG 1063
Query: 396 LNQQP 400
+ QP
Sbjct: 1064 TSAQP 1068
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 49.7 bits (117), Expect = 8e-06
Identities = 71/304 (23%), Positives = 111/304 (36%), Gaps = 21/304 (6%)
Query: 290 PPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPS--SSGGPLVTVSTP 347
P P P P + +PPP S V + TS A VP+ P V TP
Sbjct: 1016 PAAAVPTPEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTP 1075
Query: 348 LHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMAS 407
SP P+ ++ A +A P P S A+ + E+ + P AS
Sbjct: 1076 EEPTSPAAAVPTPEEPTSPA---AAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPAS 1132
Query: 408 LPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQP 467
P P EPA P S T +S S +++ T
Sbjct: 1133 -PAAAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESA----SPAAAVPTPAESASFAA 1187
Query: 468 LHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLITDT 527
+ + ++P P S T + +AT+ + SP A E A +++
Sbjct: 1188 VVATLEEP-TSPAASVPTPAAMVATLEEFTSPAASVPTSEEPASL--------AAAVSNP 1238
Query: 528 TNLSALASLTPTKQVFTSDTEA-SSESGLHTPASQATTLHVPSQDPASIQHL-QPAHRLS 585
++ A+ PT + TS A + L +PA+ T P+ A++ +L +PA +
Sbjct: 1239 EEPTSPAAAVPTLEEPTSSAAAVLTPEELSSPAASVPTPEEPASPAAAVSNLEEPASPAA 1298
Query: 586 ASPT 589
A PT
Sbjct: 1299 AVPT 1302
Score = 41.2 bits (95), Expect = 0.003
Identities = 51/206 (24%), Positives = 77/206 (37%), Gaps = 30/206 (14%)
Query: 290 PPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSS------------ 337
P P P PA +P +P P S S V + + S A VP+ +
Sbjct: 1133 PAAAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAVPTPAESASFAAVVATL 1192
Query: 338 ---GGPLVTVSTPLHQVSPTG--LEPSHSLLSTE--AKLVSAAGGPLPPVSTLTALHSLE 390
P +V TP V+ P+ S+ ++E A L +A P P S A+ +LE
Sbjct: 1193 EEPTSPAASVPTPAAMVATLEEFTSPAASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLE 1252
Query: 391 Q--TSPGLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTN------TGASTLVIGLASTQ 442
+ +S P+ L S P P EPAS +N A+ +A+
Sbjct: 1253 EPTSSAAAVLTPEEL---SSPAASVPTPEEPASPAAAVSNLEEPASPAAAVPTPEVAAIP 1309
Query: 443 AQSVPVINSMGSSLTTLQPVQFSQPL 468
A SVP + P++ P+
Sbjct: 1310 AASVPTPEVPAIPAAAVPPMEEVSPI 1335
Score = 38.5 bits (88), Expect = 0.019
Identities = 44/196 (22%), Positives = 72/196 (36%), Gaps = 30/196 (15%)
Query: 289 PPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPL 348
P P A+P P P PA+ P S V V TP
Sbjct: 1127 PEEPASPAAAVPTPEEPAFPAPAV-------------------PTPEESASAAVAVPTPE 1167
Query: 349 HQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTL----TALHSLEQTSPGLNQQPQNLI 404
SP P+ + ++ A +V+ P P +++ + +LE+ + P +
Sbjct: 1168 ESASPAAAVPTPAESASFAAVVATLEEPTSPAASVPTPAAMVATLEEFTSPAASVPTSEE 1227
Query: 405 MASLPGVMT--IGPGEPASLGPTF---TNTGASTLVIGLASTQAQSVPVINSMGSSLTTL 459
ASL ++ P PA+ PT T++ A+ L S+ A SVP S +
Sbjct: 1228 PASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPEELSSPAASVPTPEEPASPAAAV 1287
Query: 460 QPVQFSQPLHPSYQQP 475
++ +P P+ P
Sbjct: 1288 SNLE--EPASPAAAVP 1301
Score = 32.3 bits (72), Expect = 1.4
Identities = 61/293 (20%), Positives = 99/293 (33%), Gaps = 36/293 (12%)
Query: 319 GVRYGQPATSETAEVPSSSGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLV-------- 370
G G + T P V VSTP SP P+ ++ A V
Sbjct: 969 GTPEGPVTPATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPEEPTS 1028
Query: 371 --SAAGGPLPPVSTLTALHSLEQ-TSPGLN-QQPQNLIMASLPGVMTIGPGEPASLGPT- 425
+A P P S A+ + E+ TSP P+ + P PA+ PT
Sbjct: 1029 PAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTP 1088
Query: 426 --FTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQ--------FSQPLHPSYQQP 475
T+ A+ ++ A +VP S + + P P++ P
Sbjct: 1089 EEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAP 1148
Query: 476 LMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYT------HTGLLPQTMLITDTTN 529
+P + + + + T + SP A E A + P + T
Sbjct: 1149 AVPTPEESASAAVAVPTPEESASPAAAVPTPAESASFAAVVATLEEPTSPAASVPTPAAM 1208
Query: 530 LSALASLT-PTKQVFTSDTEASSESGLH------TPASQATTLHVPSQDPASI 575
++ L T P V TS+ AS + + +PA+ TL P+ A++
Sbjct: 1209 VATLEEFTSPAASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAV 1261
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 49.7 bits (117), Expect = 8e-06
Identities = 75/274 (27%), Positives = 111/274 (40%), Gaps = 67/274 (24%)
Query: 283 MDTYSGPP----PGPGPGPA-LP----AHSSPGLPPPALSPSKVHGVRY-GQPATSETAE 332
+DT GPP PGP PA LP ++P PP + + + GQP+ +
Sbjct: 416 VDTSPGPPDTELAAPGPPPARLPQLWDPTAAPYPTPPGGPLAATRSMFFNGQPSPGQRLC 475
Query: 333 VPSSSGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQT 392
+P S+ PL P QV PT PS + ++L AGGP + AL + +T
Sbjct: 476 LPQSA--PL-----PWPQVLPTA-RPSPHGMEMLSRLPFPAGGPEWQGGSQGALGTAGKT 527
Query: 393 SPGLNQQPQNLIMASLPGVMTIGPGEPASLGPT-FTNTGASTLVIGLASTQAQ------- 444
PG ++ LP V + G PA T+ GA L G+A Q
Sbjct: 528 -PGPREK--------LPAVRSSQGGSPALFTYNGMTDPGAQPLFFGVAQPQVSPHGTPSL 578
Query: 445 ---------------SVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLM-----------P 478
P N+ GS+ ++L P+ S P +PS ++ + P
Sbjct: 579 PPPRVVGASPSESPLPSPATNTAGSTCSSLSPMS-SSPANPSSEESQLPGPLGPSAFFHP 637
Query: 479 PVQSHVTQSPFMATMAQLQSPHALYSH-KPEVAQ 511
P T SPF + + PH+L +H +PE A+
Sbjct: 638 PTHPQETGSPFPSP----EPPHSLPTHYQPEPAK 667
>gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens]
Length = 861
Score = 49.3 bits (116), Expect = 1e-05
Identities = 90/355 (25%), Positives = 132/355 (37%), Gaps = 51/355 (14%)
Query: 301 AHSSPGLPPPALSPS-KVHGVRYGQPATS-------ETAEVPSSSGGPLVTVSTPLHQVS 352
+HS PG L PS V G+P TS ET +P S+ ++ + S
Sbjct: 83 SHSGPGATGTTLFPSHSATSVFVGEPKTSPITSASMETTALPGSTTTAGLSEKSTTFYSS 142
Query: 353 PTGLEPSHSLLSTEAKLVS--AAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPG 410
P + + S T + VS + P T T T PG++Q+ + S+PG
Sbjct: 143 PRSPDRTLSPARTTSSGVSEKSTTSHSRPGPTHTIAFPDSTTMPGVSQE--STASHSIPG 200
Query: 411 VM--TIGPGE--PASLGPTFTNTGAS------------TLVIGLASTQAQSVPVINSMGS 454
T+ PG P+SLGP T +S T GL S PV +S GS
Sbjct: 201 STDTTLSPGTTTPSSLGPESTTFHSSPGYTKTTRLPDNTTTSGLLEA---STPVHSSTGS 257
Query: 455 SLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTH 514
TTL P S H S T T + Y P TH
Sbjct: 258 PHTTLSP--SSSTTHEGEPTTFQSWPSSKDTSPAPSGTTSAFVKLSTTYHSSPSSTPTTH 315
Query: 515 TGLLPQTMLITDTT---NLSALASLT---PTKQVFTSDTEAS--------SESGLHTPAS 560
T+ ++ + + S +A+ T P + + E S S +H P S
Sbjct: 316 FSASSTTLGHSEESTPVHSSPVATATTPPPARSATSGHVEESTAYHRSPGSTQTMHFPES 375
Query: 561 QATTLHVPSQDPASIQHLQPAHRLSASP-TVSSSSLVLYQSSDSSNGQSHLLPSN 614
T+ H S++ A+ H H S++P T ++ + Y SS S +H S+
Sbjct: 376 STTSGH--SEESATF-HGSTTHTKSSTPSTTAALAHTSYHSSLGSTETTHFRDSS 427
Score = 40.4 bits (93), Expect = 0.005
Identities = 93/360 (25%), Positives = 125/360 (34%), Gaps = 60/360 (16%)
Query: 300 PAHSSPGLPPPALSPSKVHGVRYGQPAT-------SETAEVPSSSGGPLVTVSTPLH--- 349
P HSS G P LSPS G+P T +T+ PS + V +ST H
Sbjct: 250 PVHSSTGSPHTTLSPSS-STTHEGEPTTFQSWPSSKDTSPAPSGTTSAFVKLSTTYHSSP 308
Query: 350 --------QVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQT----SPGLN 397
S T L S + V+ A P PP + T+ H E T SPG
Sbjct: 309 SSTPTTHFSASSTTLGHSEESTPVHSSPVATATTP-PPARSATSGHVEESTAYHRSPGST 367
Query: 398 QQPQNLIMASLPGVMTIGPGEPASL---GPTFTNTGASTLVIGLASTQAQSVPVINSMGS 454
Q M T G E ++ T T + + LA T S S+GS
Sbjct: 368 Q-----TMHFPESSTTSGHSEESATFHGSTTHTKSSTPSTTAALAHTSYHS-----SLGS 417
Query: 455 SLTT--LQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQL---QSPHALYSHKPEV 509
+ TT S S P + T P +T + L +P + S E
Sbjct: 418 TETTHFRDSSTISGRSEESKASHSSPDAMA-TTVLPAGSTPSVLVGDSTPSPISSGSMET 476
Query: 510 ----AQYTHTGLLPQTMLI------TDTTNLSALASLTPTKQVFTSDTEASSESGLHTPA 559
T GL ++ DTT+L A +T + S T S HT A
Sbjct: 477 TALPGSTTKPGLSEKSTTFYSSPRSPDTTHLP--ARMTSSGVSEESTTSHSRPGSTHTTA 534
Query: 560 SQATTLHVPSQDPASIQHLQPA---HRLSASPTVSSSSLVLYQSSDSSNG--QSHLLPSN 614
+T ++ H P LS T +SS Y + SS G ++ LLP N
Sbjct: 535 FPGSTTMPGLSQESTASHSSPGPTDTTLSPGSTTASSLGPEYTTFHSSPGSTETTLLPDN 594
Score = 35.0 bits (79), Expect = 0.21
Identities = 83/361 (22%), Positives = 121/361 (33%), Gaps = 65/361 (18%)
Query: 300 PAHSSP----GLPPPALSPSKVH----GVRYGQPATSETAEVPSSS-------------G 338
P HSSP PPPA S + H + P +++T P SS G
Sbjct: 331 PVHSSPVATATTPPPARSATSGHVEESTAYHRSPGSTQTMHFPESSTTSGHSEESATFHG 390
Query: 339 GPLVTVSTPLHQVSPTGLEPSHSLL-STEAKLVSAAGGPLPPVSTLTALHS----LEQTS 393
T S+ + HS L STE + A HS + T
Sbjct: 391 STTHTKSSTPSTTAALAHTSYHSSLGSTETTHFRDSSTISGRSEESKASHSSPDAMATTV 450
Query: 394 PGLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLAST------------ 441
P L+ S P ++ G E +L + T G S S+
Sbjct: 451 LPAGSTPSVLVGDSTPSPISSGSMETTALPGSTTKPGLSEKSTTFYSSPRSPDTTHLPAR 510
Query: 442 ------QAQSVPVINSMGSSLTTLQPVQFSQP-LHPSYQQPLMPPVQSHVTQSPFMATMA 494
+S + GS+ TT P + P L P + T SP T +
Sbjct: 511 MTSSGVSEESTTSHSRPGSTHTTAFPGSTTMPGLSQESTASHSSPGPTDTTLSPGSTTAS 570
Query: 495 QLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDTEASSESG 554
L + + P T T LLP +TT L + TP S S +G
Sbjct: 571 SLGPEYTTFHSSPGS---TETTLLPD-----NTTASGLLEASTPVHSSTRSPHTTLSPAG 622
Query: 555 LHTPASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSSLVLYQSSDSSNGQSHLLPSN 614
T ++TT H S + +PA P ++S+ V + S +S+G +P+
Sbjct: 623 STTRQGESTTFH----SWPSSKDTRPA------PPTTTSAFV--EPSTTSHGSPSSIPTT 670
Query: 615 H 615
H
Sbjct: 671 H 671
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 49.3 bits (116), Expect = 1e-05
Identities = 90/355 (25%), Positives = 132/355 (37%), Gaps = 51/355 (14%)
Query: 301 AHSSPGLPPPALSPS-KVHGVRYGQPATS-------ETAEVPSSSGGPLVTVSTPLHQVS 352
+HS PG L PS V G+P TS ET +P S+ ++ + S
Sbjct: 227 SHSGPGATGTTLFPSHSATSVFVGEPKTSPITSASMETTALPGSTTTAGLSEKSTTFYSS 286
Query: 353 PTGLEPSHSLLSTEAKLVS--AAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPG 410
P + + S T + VS + P T T T PG++Q+ + S+PG
Sbjct: 287 PRSPDRTLSPARTTSSGVSEKSTTSHSRPGPTHTIAFPDSTTMPGVSQE--STASHSIPG 344
Query: 411 VM--TIGPGE--PASLGPTFTNTGAS------------TLVIGLASTQAQSVPVINSMGS 454
T+ PG P+SLGP T +S T GL S PV +S GS
Sbjct: 345 STDTTLSPGTTTPSSLGPESTTFHSSPGYTKTTRLPDNTTTSGLLEA---STPVHSSTGS 401
Query: 455 SLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTH 514
TTL P S H S T T + Y P TH
Sbjct: 402 PHTTLSP--SSSTTHEGEPTTFQSWPSSKDTSPAPSGTTSAFVKLSTTYHSSPSSTPTTH 459
Query: 515 TGLLPQTMLITDTT---NLSALASLT---PTKQVFTSDTEAS--------SESGLHTPAS 560
T+ ++ + + S +A+ T P + + E S S +H P S
Sbjct: 460 FSASSTTLGHSEESTPVHSSPVATATTPPPARSATSGHVEESTAYHRSPGSTQTMHFPES 519
Query: 561 QATTLHVPSQDPASIQHLQPAHRLSASP-TVSSSSLVLYQSSDSSNGQSHLLPSN 614
T+ H S++ A+ H H S++P T ++ + Y SS S +H S+
Sbjct: 520 STTSGH--SEESATF-HGSTTHTKSSTPSTTAALAHTSYHSSLGSTETTHFRDSS 571
Score = 48.1 bits (113), Expect = 2e-05
Identities = 77/307 (25%), Positives = 119/307 (38%), Gaps = 58/307 (18%)
Query: 325 PATSETAEVPSSSGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVS--AAGGPLPPVST 382
P+++ET +P S P ++ + SP + + S +T + VS ++ P ST
Sbjct: 2502 PSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGST 2561
Query: 383 LTALHSLEQTSPGLNQQPQNLIMASLPGV--MTIGPGEPASLGPTFTNT------GASTL 434
T T+PGL++ + S PG T+ P + GP+ +T G++
Sbjct: 2562 HTTAFPDSTTTPGLSR--HSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSPGSTDT 2619
Query: 435 VIGLASTQA-----QSVPVINSMGSSLTTLQP--------VQFSQPLHPSYQQPLMPPVQ 481
+ ST A +S +S GS+ TTL P V+ S +H S P
Sbjct: 2620 ALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSSTGSP------ 2673
Query: 482 SHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQ 541
T SP +T LQ + P THT P + + P ++
Sbjct: 2674 -RTTLSPASSTSPGLQGESTTFQTHP---ASTHTTPSPPS------------TATAPVEE 2717
Query: 542 VFTSDTEASSESGLHTPASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSSLVLYQSS 601
T S H PAS T+ H + ++I H P AS T SS+ S+
Sbjct: 2718 STTYHRSPGSTPTTHFPASSTTSGH---SEKSTIFHSSP----DASGTTPSSA----HST 2766
Query: 602 DSSNGQS 608
S G+S
Sbjct: 2767 TSGRGES 2773
Score = 47.8 bits (112), Expect = 3e-05
Identities = 71/319 (22%), Positives = 123/319 (38%), Gaps = 37/319 (11%)
Query: 325 PATSETAEVPSSSGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVS--AAGGPLPPVST 382
P+++ET +P S P ++ + SP + + S +T + VS ++ P ST
Sbjct: 4059 PSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGST 4118
Query: 383 LTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQ 442
T T+ GL+Q+P + T+ PG +T AS+L G ST
Sbjct: 4119 HTTAFPDSTTTSGLSQEPTTSHSSQGSTEATLSPG----------STTASSL--GQQSTT 4166
Query: 443 AQSVPVINSMGSSLTTLQP--------VQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMA 494
S P G + TTL P V+ S P H S H T +P +T
Sbjct: 4167 FHSSP-----GDTETTLLPDDTITSGLVEASTPTHSS-------TGSLHTTLTPASSTST 4214
Query: 495 QLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDT---EASS 551
LQ + P + T + + + +T + S TPT S T +
Sbjct: 4215 GLQEESTTFQSWPSSSDTTPSPPSTTAVPVEVSTTYHSRPSSTPTTHFSASSTTLGRSEE 4274
Query: 552 ESGLHTPASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSSLVLYQSSDSSNGQSHLL 611
+ +H+ T P++ S+ +P +S + +++L ++ + +S
Sbjct: 4275 STTVHSSPGATGTALFPTRSATSVLVGEPTTSPISSGSTETTALPGSTTTAGLSEKSTTF 4334
Query: 612 PSNHSVIETFISTQMASSS 630
S+ +T +S +SS
Sbjct: 4335 YSSPRSPDTTLSPASTTSS 4353
Score = 47.0 bits (110), Expect = 5e-05
Identities = 72/319 (22%), Positives = 123/319 (38%), Gaps = 37/319 (11%)
Query: 325 PATSETAEVPSSSGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVS--AAGGPLPPVST 382
P+++ET +P S P ++ + SP + + S +T + VS ++ P ST
Sbjct: 2976 PSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGST 3035
Query: 383 LTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQ 442
T T+ GL+Q+P + T+ PG +T AS+L G ST
Sbjct: 3036 HTTAFPDSTTTSGLSQEPTASHSSQGSTEATLSPG----------STTASSL--GQQSTT 3083
Query: 443 AQSVPVINSMGSSLTTLQP--------VQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMA 494
S P G + TTL P V+ S P H S H T +P +T A
Sbjct: 3084 FHSSP-----GDTETTLLPDDTITSGLVEASTPTHSS-------TGSLHTTLTPASSTSA 3131
Query: 495 QLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDT---EASS 551
LQ + P + T + + +T + S TPT S T +
Sbjct: 3132 GLQEESTTFQSWPSSSDTTPSPPGTTAAPVEVSTTYHSRPSSTPTTHFSASSTTLGRSEE 3191
Query: 552 ESGLHTPASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSSLVLYQSSDSSNGQSHLL 611
+ +H+ T P++ S+ +P +S + +++L ++ + +S
Sbjct: 3192 STTVHSSPGATGTALFPTRSATSVLVGEPTTSPISSGSTETTALPGSTTTAGLSEKSTTF 3251
Query: 612 PSNHSVIETFISTQMASSS 630
S+ +T +S +SS
Sbjct: 3252 YSSPRSPDTTLSPASTTSS 3270
Score = 45.1 bits (105), Expect = 2e-04
Identities = 71/319 (22%), Positives = 122/319 (38%), Gaps = 37/319 (11%)
Query: 325 PATSETAEVPSSSGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVS--AAGGPLPPVST 382
P+++ET +P S P ++ + SP + + S +T + VS ++ P ST
Sbjct: 1419 PSSTETTTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGST 1478
Query: 383 LTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQ 442
T T+ L+Q+P + T+ PG +T AS+L G ST
Sbjct: 1479 HTTAFPDSTTTSDLSQEPTTSHSSQGSTEATLSPG----------STTASSL--GQQSTT 1526
Query: 443 AQSVPVINSMGSSLTTLQP--------VQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMA 494
S P G + TTL P V+ S P H S H T +P +T A
Sbjct: 1527 FHSSP-----GDTETTLLPDDTITSGLVEASTPTHSS-------TGSLHTTLTPASSTSA 1574
Query: 495 QLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDT---EASS 551
LQ + P + T + + +T + S TPT S T +
Sbjct: 1575 GLQEESTTFQSWPSSSDTTPSPPGTTAAPVEVSTTYHSRPSSTPTTHFSASSTTLGRSEE 1634
Query: 552 ESGLHTPASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSSLVLYQSSDSSNGQSHLL 611
+ +H+ T P++ S+ +P +S + +++L ++ + +S
Sbjct: 1635 STTVHSSPGATGTALFPTRSATSVLVGEPTTSPISSGSTETTALPGSTTTAGLSEKSTTF 1694
Query: 612 PSNHSVIETFISTQMASSS 630
S+ +T +S +SS
Sbjct: 1695 YSSPRSPDTTLSPASTTSS 1713
Score = 44.7 bits (104), Expect = 3e-04
Identities = 92/414 (22%), Positives = 150/414 (36%), Gaps = 47/414 (11%)
Query: 242 IQRGVSPSQAQGLGSNLVTEVRVYN---------------WFANRRKEEAFRHKLAMDTY 286
+ +PS A+ S LV E Y+ + R +E H T
Sbjct: 4725 VATATTPSPARSTTSGLVEESTAYHSSPGSTQTMHFPESSTASGRSEESRTSHSSTTHTI 4784
Query: 287 SGPPPGPGPGPALPA--HSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPL--- 341
S PP P HSSPG P + +T+ + ++ PL
Sbjct: 4785 SSPPSTTSALVEEPTSYHSSPGSIATTHFPESSTTSGRSEESTASHSSPDTNGITPLPAH 4844
Query: 342 VTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQ 401
T S + + + + P S E L S A P +S + + SP P
Sbjct: 4845 FTTSGRIAESTTFYISPG----SMETTLASTA--TTPGLSAKSTILYSSSRSPDQTLSPA 4898
Query: 402 NLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQP 461
++ +S+ G T + S T +T + ST S P GS+ TTL P
Sbjct: 4899 SMTSSSISGEPTSLYSQAESTHTTAFPASTTTSGLSQESTTFHSKP-----GSTETTLSP 4953
Query: 462 VQF-SQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKP---EVAQYTHTGL 517
+ + P P + T SP T+ L + P E ++H+
Sbjct: 4954 GSITTSSFAQEFTTPHSQPGSALSTVSPASTTVPGLSEESTTFYSSPGSTETTAFSHSNT 5013
Query: 518 LPQTMLITDTTNLSALASLTPTKQVFT-SDTEASSESGLHTPASQAT-TLHVPSQDPASI 575
+ ++ +T T T T + T+ ES +S AT T +P++ AS
Sbjct: 5014 M--SIHSQQSTPFPDSPGFTHTVLPATLTTTDIGQESTAFHSSSDATGTTPLPARSTASD 5071
Query: 576 QHLQP-AHRLSASPTVSSSSLVLYQSSDSSNG---QSHLLPSNHSVIETFISTQ 625
+P +S SPT ++ L+ +S S++G +S ++ S T +ST+
Sbjct: 5072 LVGEPTTFYISPSPTYTT----LFPASSSTSGLTEESTTFHTSPSFTSTIVSTE 5121
Score = 44.3 bits (103), Expect = 3e-04
Identities = 84/367 (22%), Positives = 127/367 (34%), Gaps = 31/367 (8%)
Query: 282 AMDTYSGPPPGPGPG---PALPAHSSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSG 338
+M+T + P PG + HSSP P LSP+ + +T+ + P S+
Sbjct: 947 SMETTALPGSTTTPGLSERSTTFHSSPRSPATTLSPASTTSSGVSEESTTSRSR-PGSTH 1005
Query: 339 GPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQ 398
ST +S S ST+ L+ A+ P T HS S
Sbjct: 1006 TTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHS-SSGSTDTAL 1064
Query: 399 QPQNLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTT 458
P + S T P S T ++ I AST+ S S GS TT
Sbjct: 1065 SPGSTTALSFGQESTTFHSNPGSTHTTLFPDSTTSSGIVEASTRVHS-----STGSPRTT 1119
Query: 459 LQPVQFSQP-LHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGL 517
L P + P L P +H T SP A ++ Y P TH
Sbjct: 1120 LSPASSTSPGLQGESTAFQTHPASTHTTPSPPSTATAPVEE-STTYHRSPGSTPTTH--- 1175
Query: 518 LPQTMLITDTTNLSALASLTPTKQVFTSDTEASSESG--------LHTPASQATTLHVPS 569
P + + + S + +P T + S+ SG + +++ TTL +
Sbjct: 1176 FPASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSGRGESTTSRISPGSTEITTLPGST 1235
Query: 570 QDPASIQHLQPAHRLSASPT-----VSSSSLVLYQSSDSSNGQSHLLPSNHSVIETFIST 624
P + + SPT S +SL + + S +S Q S HS + +T
Sbjct: 1236 TTPGLSEASTTFYSSPRSPTTTLSPASMTSLGVGEESTTSRSQP---GSTHSTVSPASTT 1292
Query: 625 QMASSSQ 631
S +
Sbjct: 1293 TPGLSEE 1299
Score = 44.3 bits (103), Expect = 3e-04
Identities = 86/380 (22%), Positives = 125/380 (32%), Gaps = 64/380 (16%)
Query: 301 AHSSPGLPPPALSPSKVHGVRYGQ--------PATSETAEVPS---------------SS 337
+HSS G LSP GQ P +ET +P SS
Sbjct: 1499 SHSSQGSTEATLSPGSTTASSLGQQSTTFHSSPGDTETTLLPDDTITSGLVEASTPTHSS 1558
Query: 338 GGPLVTVSTPLHQVSPTGLEPS---HSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSP 394
G L T TP S E S S S+ S G PV T HS ++P
Sbjct: 1559 TGSLHTTLTPASSTSAGLQEESTTFQSWPSSSDTTPSPPGTTAAPVEVSTTYHSRPSSTP 1618
Query: 395 GLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGS 454
+ + + T+ A+ F A+++++G +T P+ S GS
Sbjct: 1619 TTHFSASSTTLGRSEESTTVHSSPGATGTALFPTRSATSVLVGEPTTS----PI--SSGS 1672
Query: 455 SLTTLQP-----VQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEV 509
+ TT P S+ Y P P T SP T + + +P
Sbjct: 1673 TETTALPGSTTTAGLSEKSTTFYSSPRSP----DTTLSPASTTSSGVSEESTTSHSRP-- 1726
Query: 510 AQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDTEASSESGL--------HTPASQ 561
THT P + + + S + +P T +++ S L +P S
Sbjct: 1727 -GSTHTTAFPGSTTMPGVSQESTASHSSPGSTDTTLSPGSTTASSLGPESTTFHSSPGST 1785
Query: 562 ATTLHVPSQDPAS--IQHLQPAHRLSASP---------TVSSSSLVLYQSSDSSNGQSHL 610
TTL +P AS ++ P H + SP T +QS SS
Sbjct: 1786 ETTL-LPDNTTASGLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPSSKDTMPA 1844
Query: 611 LPSNHSVIETFISTQMASSS 630
P+ S +T S S
Sbjct: 1845 PPTTTSAFVELSTTSHGSPS 1864
Score = 43.9 bits (102), Expect = 5e-04
Identities = 81/361 (22%), Positives = 125/361 (34%), Gaps = 83/361 (22%)
Query: 273 KEEAFRHKLAMDTYSGPPPGPGPGPALP-----AHSSPGLPPPALSPSKVHGVRYGQ--- 324
+E H T++ PG P + +HSSPG LSP G
Sbjct: 3274 EESTTSHSRPGSTHTTAFPGSTTMPGVSQESTASHSSPGSTDTTLSPGSTTASSLGPEST 3333
Query: 325 -----PATSETAEVP-SSSGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLP 378
P ++ET +P +++ L+ STP+H S+ G P
Sbjct: 3334 TFHSGPGSTETTLLPDNTTASGLLEASTPVH---------------------SSTGSP-- 3370
Query: 379 PVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGL 438
H+ + +Q ++ S P P P T T A +
Sbjct: 3371 --------HTTLSPAGSTTRQGESTTFQSWPNSKDTTPAPP-------TTTSAFVELSTT 3415
Query: 439 ASTQAQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQS 498
+ S P + SS TTL + S +H S PV + T SP +T + L
Sbjct: 3416 SHGSPSSTPTTHFSASS-TTLGRSEESTTVHSS-------PVATATTPSPARSTTSGLVE 3467
Query: 499 PHALYSHKPEVAQYTHTGLLPQTMLITDTT------NLSALASLTPTKQVFTSDTEASSE 552
Y P Q H P+ +DTT + ++ +S T T S T A E
Sbjct: 3468 ESTTYHSSPGSTQTMH---FPE----SDTTSGRGEESTTSHSSTTHTISSAPSTTSALVE 3520
Query: 553 --SGLHTPASQATTLHVP--------SQDPASIQHLQPAHRLSASPTVSSSSLVLYQSSD 602
+ H+ T H P S++ + Q A P S++S++L +S+
Sbjct: 3521 EPTSYHSSPGSTATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTT 3580
Query: 603 S 603
S
Sbjct: 3581 S 3581
Score = 43.9 bits (102), Expect = 5e-04
Identities = 86/394 (21%), Positives = 133/394 (33%), Gaps = 70/394 (17%)
Query: 300 PAHSSPGLPPPALSPSKVHGVRYGQ-------PATSETAEVPSSSGGPLVTVSTPLH--- 349
P HSS G P LSP+ R G+ P + +T P ++ V +ST H
Sbjct: 4445 PVHSSTGSPHTTLSPAG-STTRQGESTTFQSWPNSKDTTPAPPTTTSAFVELSTTSHGSP 4503
Query: 350 --------QVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTAL---HSLEQTSPGLNQ 398
S T L S + + V+ A P P ST + L + +SPG Q
Sbjct: 4504 SSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEESTTYHSSPGSTQ 4563
Query: 399 QPQNLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTT 458
M T G GE ++ + T S+ ++ + +S GS+ TT
Sbjct: 4564 -----TMHFPESNTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPTSYHSSPGSTATT 4618
Query: 459 LQP--------VQFSQPLHPSYQ------------------QPLMPPVQS---HVTQSPF 489
P + S H S + P+ S T P
Sbjct: 4619 HFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPG 4678
Query: 490 MATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLITD---TTNLSALA-SLTPTKQVFTS 545
T L + P TH T+ ++ T + S +A + TP+ T+
Sbjct: 4679 STTTPGLSEKSTTFHSSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPARSTT 4738
Query: 546 DTEASSESGLHTPASQATTLHVPSQDPAS-------IQHLQPAHRLSASPTVSSSSL--- 595
+ H+ T+H P AS H H +S+ P+ +S+ +
Sbjct: 4739 SGLVEESTAYHSSPGSTQTMHFPESSTASGRSEESRTSHSSTTHTISSPPSTTSALVEEP 4798
Query: 596 VLYQSSDSSNGQSHLLPSNHSVIETFISTQMASS 629
Y SS S +H S+ + + ST SS
Sbjct: 4799 TSYHSSPGSIATTHFPESSTTSGRSEESTASHSS 4832
Score = 43.5 bits (101), Expect = 6e-04
Identities = 74/357 (20%), Positives = 122/357 (34%), Gaps = 75/357 (21%)
Query: 273 KEEAFRHKLAMDTYSGPPPGPGPGPALP-----AHSSPGLPPPALSPSKVHGVRYG---- 323
+E H T++ PG P + +HSSPG LSP G
Sbjct: 1717 EESTTSHSRPGSTHTTAFPGSTTMPGVSQESTASHSSPGSTDTTLSPGSTTASSLGPEST 1776
Query: 324 ----QPATSETAEVP-SSSGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLP 378
P ++ET +P +++ L+ STP+H S+ G P
Sbjct: 1777 TFHSSPGSTETTLLPDNTTASGLLEASTPVH---------------------SSTGSP-- 1813
Query: 379 PVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGL 438
H+ + +Q ++ S P P P T T A +
Sbjct: 1814 --------HTTLSPAGSTTRQGESTTFQSWPSSKDTMPAPP-------TTTSAFVELSTT 1858
Query: 439 ASTQAQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQS 498
+ S P + SS TTL + S +H S PV + T SP +T + L
Sbjct: 1859 SHGSPSSTPTTHFSASS-TTLGRSEESTTVHSS-------PVATATTPSPARSTTSGLVE 1910
Query: 499 PHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDTEASS----ESG 554
Y P Q H P++ + + S + + T + + + S+ +
Sbjct: 1911 ESTAYHSSPGSTQTMH---FPESSTASGRSEESRTSHSSTTHTISSPPSTTSALVEEPTS 1967
Query: 555 LHTPASQATTLHVP--------SQDPASIQHLQPAHRLSASPTVSSSSLVLYQSSDS 603
H+ T H P S++ + Q A P S++S++L +S+ S
Sbjct: 1968 YHSSPGSTATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTS 2024
Score = 43.1 bits (100), Expect = 8e-04
Identities = 86/380 (22%), Positives = 127/380 (33%), Gaps = 64/380 (16%)
Query: 301 AHSSPGLPPPALSPSKVHGVRYGQ--------PATSETAEVPS---------------SS 337
+HSS G LSP GQ P +ET +P SS
Sbjct: 3056 SHSSQGSTEATLSPGSTTASSLGQQSTTFHSSPGDTETTLLPDDTITSGLVEASTPTHSS 3115
Query: 338 GGPLVTVSTPLHQVSPTGLEPS---HSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSP 394
G L T TP S E S S S+ S G PV T HS ++P
Sbjct: 3116 TGSLHTTLTPASSTSAGLQEESTTFQSWPSSSDTTPSPPGTTAAPVEVSTTYHSRPSSTP 3175
Query: 395 GLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGS 454
+ + + T+ A+ F A+++++G +T P+ S GS
Sbjct: 3176 TTHFSASSTTLGRSEESTTVHSSPGATGTALFPTRSATSVLVGEPTTS----PI--SSGS 3229
Query: 455 SLTTLQP-----VQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEV 509
+ TT P S+ Y P P T SP T + + +P
Sbjct: 3230 TETTALPGSTTTAGLSEKSTTFYSSPRSP----DTTLSPASTTSSGVSEESTTSHSRP-- 3283
Query: 510 AQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDTEASSESGL-------HT-PASQ 561
THT P + + + S + +P T +++ S L H+ P S
Sbjct: 3284 -GSTHTTAFPGSTTMPGVSQESTASHSSPGSTDTTLSPGSTTASSLGPESTTFHSGPGST 3342
Query: 562 ATTLHVPSQDPAS--IQHLQPAHRLSASP---------TVSSSSLVLYQSSDSSNGQSHL 610
TTL +P AS ++ P H + SP T +QS +S +
Sbjct: 3343 ETTL-LPDNTTASGLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPNSKDTTPA 3401
Query: 611 LPSNHSVIETFISTQMASSS 630
P+ S +T S S
Sbjct: 3402 PPTTTSAFVELSTTSHGSPS 3421
Score = 43.1 bits (100), Expect = 8e-04
Identities = 81/332 (24%), Positives = 120/332 (36%), Gaps = 55/332 (16%)
Query: 301 AHSSPGLPPPALSPSKVHGVRYGQ--------PATSETAEVPSSS-GGPLVTVSTPLHQV 351
+HSS G LSP GQ P +ET +P + LV STP H
Sbjct: 4139 SHSSQGSTEATLSPGSTTASSLGQQSTTFHSSPGDTETTLLPDDTITSGLVEASTPTH-- 4196
Query: 352 SPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGV 411
S TG SL +T S + G +T + S T+P P + + V
Sbjct: 4197 SSTG-----SLHTTLTPASSTSTGLQEESTTFQSWPSSSDTTP----SPPSTTAVPVE-V 4246
Query: 412 MTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQPLHPS 471
T P+S T + ++TL +S V +S G++ T L P + + +
Sbjct: 4247 STTYHSRPSSTPTTHFSASSTTL-----GRSEESTTVHSSPGATGTALFPTRSATSV--L 4299
Query: 472 YQQPLMPPVQSHVTQS---PFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTT 528
+P P+ S T++ P T A L + P P T L +T
Sbjct: 4300 VGEPTTSPISSGSTETTALPGSTTTAGLSEKSTTFYSSPR---------SPDTTLSPAST 4350
Query: 529 NLSALASLTPTKQVFTSDTEASSESGLHTPASQATTLHVPSQDPASIQHLQPAH---RLS 585
S ++ S T S +HT A ++T ++ H P LS
Sbjct: 4351 TSSGVSE--------ESTTSHSRPGSMHTTAFPSSTTMPGVSQESTASHSSPGSTDTTLS 4402
Query: 586 ASPTVSSS---SLVLYQSSDSSNGQSHLLPSN 614
T +SS + SS S ++ LLP N
Sbjct: 4403 PGSTTASSLGPESTTFHSSPGST-ETTLLPDN 4433
Score = 43.1 bits (100), Expect = 8e-04
Identities = 73/346 (21%), Positives = 120/346 (34%), Gaps = 73/346 (21%)
Query: 282 AMDTYSGPPPGPGPG---PALPAHSSPGLPPPALSPSKVHGVRYG--------QPATSET 330
+M T + P PG + +HSSPG LSP G P ++ET
Sbjct: 4368 SMHTTAFPSSTTMPGVSQESTASHSSPGSTDTTLSPGSTTASSLGPESTTFHSSPGSTET 4427
Query: 331 AEVP-SSSGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSL 389
+P +++ L+ STP+H S+ G P H+
Sbjct: 4428 TLLPDNTTASGLLEASTPVH---------------------SSTGSP----------HTT 4456
Query: 390 EQTSPGLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVI 449
+ +Q ++ S P P P T T A + + S P
Sbjct: 4457 LSPAGSTTRQGESTTFQSWPNSKDTTPAPP-------TTTSAFVELSTTSHGSPSSTPTT 4509
Query: 450 NSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEV 509
+ SS TTL + S +H S PV + T SP +T + L Y P
Sbjct: 4510 HFSASS-TTLGRSEESTTVHSS-------PVATATTPSPARSTTSGLVEESTTYHSSPGS 4561
Query: 510 AQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDTEASS----ESGLHTPASQATTL 565
Q H P++ + S + + T + ++ + S+ + H+ T
Sbjct: 4562 TQTMH---FPESNTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPTSYHSSPGSTATT 4618
Query: 566 HVP--------SQDPASIQHLQPAHRLSASPTVSSSSLVLYQSSDS 603
H P S++ + Q A P S++S++L +S+ S
Sbjct: 4619 HFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTS 4664
Score = 41.2 bits (95), Expect = 0.003
Identities = 85/339 (25%), Positives = 112/339 (33%), Gaps = 66/339 (19%)
Query: 282 AMDTYSGPPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATS------------- 328
A T SGP + +HSSPG ALSP + +GQ +T+
Sbjct: 2122 ASTTTSGPSQ-----ESTTSHSSPGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLF 2176
Query: 329 -----------ETAEVPSSSGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGP- 376
+ V SS+G P T+S P SP GL+ + T P
Sbjct: 2177 PDSTTSSGIVEASTRVHSSTGSPRTTLS-PASSTSP-GLQGESTAFQTHPASTHTTPSPP 2234
Query: 377 ---LPPVSTLTALHSLEQTSPGLN---------QQPQNLIMASLPGV----------MTI 414
PV T H ++P + ++ I S P T
Sbjct: 2235 STATAPVEESTTYHRSPGSTPTTHFPASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTS 2294
Query: 415 GPGEPA----SLGPT-FTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQF-SQPL 468
G GE S G T T ST GL+ S +S S TTL P S +
Sbjct: 2295 GRGESTTSRISPGSTEITTLPGSTTTPGLSEA---STTFYSSPRSPTTTLSPASMTSLGV 2351
Query: 469 HPSYQQPLMPPVQSHVTQSPFMATMAQL-QSPHALYSHKPEVAQYTHTGLLPQTMLITD- 526
P +H T SP T L + +YS P + T P T + +
Sbjct: 2352 GEESTTSRSQPGSTHSTVSPASTTTPGLSEESTTVYSSSPGSTETTVFPRTPTTSVRGEE 2411
Query: 527 -TTNLSALASLTPTKQVFTSDTEASSESGLHTPASQATT 564
TT S AS T S T +E P S A+T
Sbjct: 2412 PTTFHSRPASTHTTLFTEDSTTSGLTEESTAFPGSPAST 2450
Score = 40.4 bits (93), Expect = 0.005
Identities = 93/360 (25%), Positives = 125/360 (34%), Gaps = 60/360 (16%)
Query: 300 PAHSSPGLPPPALSPSKVHGVRYGQPAT-------SETAEVPSSSGGPLVTVSTPLH--- 349
P HSS G P LSPS G+P T +T+ PS + V +ST H
Sbjct: 394 PVHSSTGSPHTTLSPSS-STTHEGEPTTFQSWPSSKDTSPAPSGTTSAFVKLSTTYHSSP 452
Query: 350 --------QVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQT----SPGLN 397
S T L S + V+ A P PP + T+ H E T SPG
Sbjct: 453 SSTPTTHFSASSTTLGHSEESTPVHSSPVATATTP-PPARSATSGHVEESTAYHRSPGST 511
Query: 398 QQPQNLIMASLPGVMTIGPGEPASL---GPTFTNTGASTLVIGLASTQAQSVPVINSMGS 454
Q M T G E ++ T T + + LA T S S+GS
Sbjct: 512 Q-----TMHFPESSTTSGHSEESATFHGSTTHTKSSTPSTTAALAHTSYHS-----SLGS 561
Query: 455 SLTT--LQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQL---QSPHALYSHKPEV 509
+ TT S S P + T P +T + L +P + S E
Sbjct: 562 TETTHFRDSSTISGRSEESKASHSSPDAMA-TTVLPAGSTPSVLVGDSTPSPISSGSMET 620
Query: 510 ----AQYTHTGLLPQTMLI------TDTTNLSALASLTPTKQVFTSDTEASSESGLHTPA 559
T GL ++ DTT+L AS+T + S T S HT A
Sbjct: 621 TALPGSTTKPGLSEKSTTFYSSPRSPDTTHLP--ASMTSSGVSEESTTSHSRPGSTHTTA 678
Query: 560 SQATTLHVPSQDPASIQHLQPA---HRLSASPTVSSSSLVLYQSSDSSNG--QSHLLPSN 614
+T ++ H P LS T +SS Y + S G ++ LLP N
Sbjct: 679 FPGSTTMPGLSQESTASHSSPGPTDTTLSPGSTTASSLGPEYTTFHSRPGSTETTLLPDN 738
Score = 40.4 bits (93), Expect = 0.005
Identities = 81/384 (21%), Positives = 139/384 (36%), Gaps = 51/384 (13%)
Query: 282 AMDTYSGPPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATS------------- 328
A T SGP + +HSSPG ALSP + +GQ +T+
Sbjct: 2596 ASTTTSGPSQ-----ESTTSHSSPGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLF 2650
Query: 329 -----------ETAEVPSSSGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGP- 376
+ V SS+G P T+S P SP GL+ + T P
Sbjct: 2651 PDSTTSSGIVEASTRVHSSTGSPRTTLS-PASSTSP-GLQGESTTFQTHPASTHTTPSPP 2708
Query: 377 ---LPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGAST 433
PV T H ++P P + + TI P + G T ++ ++T
Sbjct: 2709 STATAPVEESTTYHRSPGSTP-TTHFPASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTT 2767
Query: 434 LVIGLASTQ--AQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQ----S 487
G ++T + I ++ S TT + S + S + P + +T
Sbjct: 2768 SGRGESTTSRISPGSTEITTLPGSTTTPGLSEASTTFYSSPRSPTTTLSPASMTSLGVGE 2827
Query: 488 PFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDT 547
+ +Q S H+ S A T GL ++ + ++ S ++ P T+
Sbjct: 2828 ESTTSRSQPGSTHSTVS----PASTTTPGLSEESTTVYSSSPGSTETTVFPRST--TTSV 2881
Query: 548 EASSESGLHT-PASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSSLVLYQSSDSSNG 606
+ H+ PAS TTL ++D + + + SP + + L ++
Sbjct: 2882 RGEEPTTFHSRPASTHTTLF--TEDSTTSGLTEESTAFPGSPASTQTGLPATLTTADLGE 2939
Query: 607 QSHLLPSNHSVIETFISTQMASSS 630
+S PS+ T +S +++S
Sbjct: 2940 ESTTFPSSSGSTGTTLSPARSTTS 2963
Score = 37.7 bits (86), Expect = 0.032
Identities = 74/322 (22%), Positives = 116/322 (36%), Gaps = 50/322 (15%)
Query: 300 PAHSSPGLPPPALSPSKVHGVRYGQ-------PATSETAEVPSSSGGPLVTVSTPLHQVS 352
P HSS G P LSP+ R G+ P + +T P ++ V +ST H S
Sbjct: 3362 PVHSSTGSPHTTLSPAG-STTRQGESTTFQSWPNSKDTTPAPPTTTSAFVELSTTSHG-S 3419
Query: 353 PTGLEPSHSLLS--TEAKLVSAAGGPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPG 410
P+ +H S T + + PV+T T T+ GL ++
Sbjct: 3420 PSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEE----------- 3468
Query: 411 VMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQPLHP 470
T P S +T G ST + S + TT V+ H
Sbjct: 3469 -STTYHSSPGSTQTMHFPESDTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPTSYHS 3527
Query: 471 SYQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNL 530
S P + T P +T + +S + SH + A TG T+++ +
Sbjct: 3528 S-------PGSTATTHFPDSSTTSG-RSEESTASHSSQDA----TG----TIVLPARSTT 3571
Query: 531 SALASLTPTKQVFTSDTEASSESGLHTP---ASQATTLHVPSQDPASIQHLQPAHRLSAS 587
S L + T + + E ++ G T + ++TT H + PA+ LS +
Sbjct: 3572 SVLLGESTTSPISSGSMETTALPGSTTTPGLSEKSTTFHSSPRSPAT--------TLSPA 3623
Query: 588 PTVSSSSLVLYQSSDSSNGQSH 609
T SS +S S G +H
Sbjct: 3624 STTSSGVSEESTTSHSRPGSTH 3645
Score = 37.4 bits (85), Expect = 0.042
Identities = 80/384 (20%), Positives = 138/384 (35%), Gaps = 51/384 (13%)
Query: 282 AMDTYSGPPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATS------------- 328
A T SGP + +HSS G ALSP + +GQ +T+
Sbjct: 1039 ASTTTSGPSQ-----ESTTSHSSSGSTDTALSPGSTTALSFGQESTTFHSNPGSTHTTLF 1093
Query: 329 -----------ETAEVPSSSGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGP- 376
+ V SS+G P T+S P SP GL+ + T P
Sbjct: 1094 PDSTTSSGIVEASTRVHSSTGSPRTTLS-PASSTSP-GLQGESTAFQTHPASTHTTPSPP 1151
Query: 377 ---LPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGAST 433
PV T H ++P P + + TI P + G T ++ ++T
Sbjct: 1152 STATAPVEESTTYHRSPGSTP-TTHFPASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTT 1210
Query: 434 LVIGLASTQ--AQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQ----S 487
G ++T + I ++ S TT + S + S + P + +T
Sbjct: 1211 SGRGESTTSRISPGSTEITTLPGSTTTPGLSEASTTFYSSPRSPTTTLSPASMTSLGVGE 1270
Query: 488 PFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDT 547
+ +Q S H+ S A T GL ++ + ++ S ++ P T+
Sbjct: 1271 ESTTSRSQPGSTHSTVS----PASTTTPGLSEESTTVYSSSRGSTETTVFPHST--TTSV 1324
Query: 548 EASSESGLHT-PASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSSLVLYQSSDSSNG 606
+ H+ PAS TTL ++D + + + SP + + L ++
Sbjct: 1325 HGEEPTTFHSRPASTHTTLF--TEDSTTSGLTEESTAFPGSPASTQTGLPATLTTADLGE 1382
Query: 607 QSHLLPSNHSVIETFISTQMASSS 630
+S PS+ T +S +++S
Sbjct: 1383 ESTTFPSSSGSTGTKLSPARSTTS 1406
Score = 36.2 bits (82), Expect = 0.094
Identities = 88/360 (24%), Positives = 121/360 (33%), Gaps = 71/360 (19%)
Query: 301 AHSSPGLPPPALSPSKVHGVRYGQPATS------------------------ETAEVPSS 336
+HSS G ALSP + +GQ +T+ + V SS
Sbjct: 3693 SHSSSGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEASTRVHSS 3752
Query: 337 SGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGP----LPPVSTLTALHSLEQT 392
+G P T+S P SP GL+ + T P PV T H +
Sbjct: 3753 TGSPRTTLS-PASSTSP-GLQGESTAFQTHPASTHTTPSPPSTATAPVEESTTYHRSPGS 3810
Query: 393 SPGLN---------QQPQNLIMASLPGV----------MTIGPGEPA----SLGPT-FTN 428
+P + ++ I S P T G GE S G T T
Sbjct: 3811 TPTTHFPASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSGRGESTTSRISPGSTEITT 3870
Query: 429 TGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQF-SQPLHPSYQQPLMPPVQSHVTQS 487
ST GL+ S +S S TTL P S + P +H T S
Sbjct: 3871 LPGSTTTPGLSEA---STTFYSSPRSPTTTLSPASMTSLGVGEESTTSRSQPGSTHSTVS 3927
Query: 488 PFMATMAQL-QSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSD 546
P T L + +YS P T T + P++ + P T
Sbjct: 3928 PASTTTPGLSEESTTVYSSSP---GSTETTVFPRSTTTSVRREEPTTFHSRPASTHTTLF 3984
Query: 547 TEASSESGLHTPASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSSLVLYQSSDSSNG 606
TE S+ SGL ++ +T S PAS Q PA +A S++ + SS S G
Sbjct: 3985 TEDSTTSGL----TEESTAFPGS--PASTQTGLPATLTTADLGEESTT---FPSSSGSTG 4035
Score = 34.3 bits (77), Expect = 0.36
Identities = 86/366 (23%), Positives = 125/366 (34%), Gaps = 75/366 (20%)
Query: 300 PAHSSP----GLPPPALSPSKVH----GVRYGQPATSETAEVPSSS-------------G 338
P HSSP PPPA S + H + P +++T P SS G
Sbjct: 475 PVHSSPVATATTPPPARSATSGHVEESTAYHRSPGSTQTMHFPESSTTSGHSEESATFHG 534
Query: 339 GPLVTVSTPLHQVSPTGLEPSHSLL-STEAKLVSAAGGPLPPVSTLTALHS----LEQTS 393
T S+ + HS L STE + A HS + T
Sbjct: 535 STTHTKSSTPSTTAALAHTSYHSSLGSTETTHFRDSSTISGRSEESKASHSSPDAMATTV 594
Query: 394 PGLNQQPQNLIMASLPGVMTIGPGEPASL---------------------GPTFTNTGAS 432
P L+ S P ++ G E +L P T+ AS
Sbjct: 595 LPAGSTPSVLVGDSTPSPISSGSMETTALPGSTTKPGLSEKSTTFYSSPRSPDTTHLPAS 654
Query: 433 TLVIGLA--STQAQSVPVINSMGSSLTTLQPVQFSQP-LHPSYQQPLMPPVQSHVTQSPF 489
G++ ST + S P GS+ TT P + P L P + T SP
Sbjct: 655 MTSSGVSEESTTSHSRP-----GSTHTTAFPGSTTMPGLSQESTASHSSPGPTDTTLSPG 709
Query: 490 MATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDTEA 549
T + L + + +P T T LLP +TT L + P S
Sbjct: 710 STTASSLGPEYTTFHSRPGS---TETTLLPD-----NTTASGLLEASMPVHSSTRSPHTT 761
Query: 550 SSESGLHTPASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSSLVLYQSSDSSNGQSH 609
S +G T ++TT H S + +PA P ++S+ V + S +S+G
Sbjct: 762 LSPAGSTTRQGESTTFH----SWPSSKDTRPA------PPTTTSAFV--EPSTTSHGSPS 809
Query: 610 LLPSNH 615
+P+ H
Sbjct: 810 SIPTTH 815
>gi|239758148 PREDICTED: similar to mucin 11 [Homo sapiens]
Length = 587
Score = 48.1 bits (113), Expect = 2e-05
Identities = 87/359 (24%), Positives = 129/359 (35%), Gaps = 57/359 (15%)
Query: 282 AMDTYSGPPPGPGPGPALPAHSSPGLPPPALSPSKVHGVRYGQPATS------------- 328
A T SGP + +HSSPG ALSP + +GQ +T+
Sbjct: 198 ASTTTSGPSQ-----ESTTSHSSPGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLF 252
Query: 329 -----------ETAEVPSSSGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGP- 376
+ V SS+G P T+S P SP GL+ + T P
Sbjct: 253 PDSTTSSGIVEASTRVHSSTGSPRTTLS-PASSTSP-GLQGESTAFQTHPASTHTTPSPP 310
Query: 377 ---LPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGAST 433
PV T H ++P P + + TI P + G T ++ ++T
Sbjct: 311 STATAPVEESTTYHRSPGSTP-TTHFPASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTT 369
Query: 434 LVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATM 493
+ S+ + S P GS+ TT + P + P SH +Q AT+
Sbjct: 370 SGVSEESSTSHSQP-----GSTHTT------AFPDSTTTSGLSQEPTTSHSSQGSTEATL 418
Query: 494 AQLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDTEASSES 553
SP + EV+ H+ P + T TT+ S AS T + S T SS
Sbjct: 419 DTTPSPPGTTAAPVEVSTTYHS--RPSS---TPTTHFS--ASSTTLGRSEESTTVHSSPG 471
Query: 554 GLHTPASQATTLHVPSQDPASIQHLQPAH---RLSASPTVSSSSLVLYQSSDSSNGQSH 609
T A +T + ++ + P LS + T SS +S S G +H
Sbjct: 472 STETTALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPASTTSSGVSEESTTSHSRPGSTH 530
>gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens]
Length = 1486
Score = 47.8 bits (112), Expect = 3e-05
Identities = 80/353 (22%), Positives = 131/353 (37%), Gaps = 50/353 (14%)
Query: 303 SSPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGGPLVTVSTPLHQVSPTGLEPS--- 359
S+P P + + + + + TS PS++ TP+ V+P+ + +
Sbjct: 159 STPVTQKPVTTVTSTYSMTTTEKGTSAMTSSPSTT----TARETPIVTVTPSSVSATDTT 214
Query: 360 -HSLLSTEAKLVSAAGGPLP---------PVSTLTALHS-LEQTSPGLNQQPQNLIMASL 408
H+ +S+ + PLP P T L + + TSP I +S+
Sbjct: 215 FHTTISSTTRTTERT--PLPTGSIHTTTSPTPVFTTLKTAVTSTSP---------ITSSI 263
Query: 409 PGVMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMGSSLTTLQPVQFSQPL 468
T+ + PT TNT +S L+ST S I S ++ T L + + P
Sbjct: 264 TSTNTVTSMTTTASQPTATNTLSSPTRTILSSTPVLSTETITSGITNTTPLSTLVTTLPT 323
Query: 469 HPSYQQPLMPP---------VQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLP 519
S P V T+ + +M S T T P
Sbjct: 324 TISRSTPTSETTYPTSPTSTVTDSTTKIAYSTSMTGTLSTETSLPPTSSSLPTTETATTP 383
Query: 520 QTMLITDTTNLSALASLTPTKQVFTSDTEASSESGLHTP--ASQATTLHVPSQDPASIQH 577
T L+T TT +S+ + TP+ F+S T S+ + TP S TT PS
Sbjct: 384 MTNLVTTTTEISSHS--TPS---FSSSTIYSTVTSHSTPRFTSSITTTETPSHSTPRFTS 438
Query: 578 LQPAHRLSASPTVSSSSLVLYQSSDSSNGQSHLLPSNHSVIETFISTQMASSS 630
+ ++ + S +SL+ ++ SH PS S I T +T ++ S
Sbjct: 439 SFTNTKTTSHRSPSFTSLI-----TTTETTSHSTPSFTSSITTTETTSHSARS 486
Score = 38.5 bits (88), Expect = 0.019
Identities = 75/341 (21%), Positives = 127/341 (37%), Gaps = 49/341 (14%)
Query: 327 TSETAEVPSSSGGPLVTVSTPLHQVS------PTGLEPSH-------SLLSTEAKLVSAA 373
T T+ S + T TPLH T SH S+ +TE S
Sbjct: 528 TETTSHSTPSFSSSITTTETPLHSTPGLTSWVTTTKTTSHITPGLTSSITTTETTSHSTP 587
Query: 374 GGPLPPVSTLTALHSLEQTSPGLNQQP-QNLIMASLPGV----------MTIGPGEPASL 422
G S++T + +++P L+ + + S + +T P P+SL
Sbjct: 588 GF----TSSITTTETTSESTPSLSSSTIYSTVSTSTTAITSHFTTSETAVTPTPVTPSSL 643
Query: 423 GPTFTNTGASTLV---IGLAS--TQAQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLM 477
T TL +G ++ T P I + S+L T + S P S + +
Sbjct: 644 STDIPTTSLRTLTPSSVGTSTSLTTTTDFPSIPTDISTLPTRTHIISSSPSIQSTETSSL 703
Query: 478 PPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLT 537
T SP TM+ ++ + + P + T ++P+T T SA + T
Sbjct: 704 VG-----TTSP---TMSTVRMTLRITENTPISSFSTSIVVIPETPTQTPPVLTSATGTQT 755
Query: 538 ---PTKQVFTSDTEASSESGLHTPASQATTLHVPSQDPASIQHLQPAHRLSASPTV---- 590
PT F S ++S TP++ +T+ SQ P H ++P++
Sbjct: 756 SPAPTTVTFGSTDSSTSTLHTLTPSTALSTIVSTSQVPIPSTHSSTLQTTPSTPSLQTSL 815
Query: 591 -SSSSLVLYQSSDSSNGQSHLLPSNHSVIETFISTQMASSS 630
S+S + S + +L S ++I + T + SSS
Sbjct: 816 TSTSEFTTESFTRGSTSTNAILTSFSTIIWSSTPTIIMSSS 856
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 47.4 bits (111), Expect = 4e-05
Identities = 75/328 (22%), Positives = 106/328 (32%), Gaps = 40/328 (12%)
Query: 280 KLAMDTYSGPPPGPGPGPALPAH---SSPGLPPPALSPSKVHGVRYGQPATSETAEVPSS 336
KL +G PG P L H SP P P P + R P S
Sbjct: 957 KLGPTLGAGTTRSPGSPPTLRVHGDTGSPRKPWPERRPPRPAATRTAPPTPSPGPSASPG 1016
Query: 337 SGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPLPPVSTLTALHSLEQTS--- 393
GP +T S +++P HS L++EA + P P L TS
Sbjct: 1017 PPGPALT-SDSSRELTP------HSALTSEATSDAPDTSPPTPDPASRTNPDLILTSPDF 1069
Query: 394 ----------PGLNQQPQNLIMASLPGVMTIGPGEPA---SLGPTFTNTGASTLVIGLAS 440
P L +P + +LP +T P P+ SL PT S L +
Sbjct: 1070 ALSTPDSSVVPALTPEPSPTPLPTLPKELTSDPSTPSEVTSLSPTSEQVPESDTTPDLDT 1129
Query: 441 TQAQSV-------PVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATM 493
T S P + TT P P+ L P V H +P T
Sbjct: 1130 TPYSSTVSEYSRSPDPSPSPHPTTTPDPTMAPDPI-----TTLNPTVTPHFPTTPHPTTT 1184
Query: 494 AQLQS-PHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDTEASSE 552
+ H+ P T + TM+ TT ++ PT S T +
Sbjct: 1185 PHPTTITHSTMIPDPTTTPQPFTTITHSTMIPDPTTTPQPFTTMQPTTTPH-STTPHPTT 1243
Query: 553 SGLHTPASQATTLHVPSQDPASIQHLQP 580
+ T + +T + P+ P +QP
Sbjct: 1244 TPHPTTITHSTMIPDPTTTPQPFTTMQP 1271
Score = 43.1 bits (100), Expect = 8e-04
Identities = 77/344 (22%), Positives = 115/344 (33%), Gaps = 66/344 (19%)
Query: 289 PPPGPGPGPALPAH--SSPGLPPP--ALSPSKVHGV---------------------RYG 323
P P P P P LP S P P +LSP+ R
Sbjct: 1084 PEPSPTPLPTLPKELTSDPSTPSEVTSLSPTSEQVPESDTTPDLDTTPYSSTVSEYSRSP 1143
Query: 324 QPATSE---TAEVPSSSGGPLVTVS---TPLHQVSPTGLEPSHSLLSTEAKLVSAAGGPL 377
P+ S T P+ + P+ T++ TP +P H T + ++
Sbjct: 1144 DPSPSPHPTTTPDPTMAPDPITTLNPTVTPHFPTTPHPTTTPHPTTITHSTMIPDPTTTP 1203
Query: 378 PPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPASLGPTFTNTGASTLVIG 437
P +T+T HS P QP + + P S P T T T +
Sbjct: 1204 QPFTTIT--HSTMIPDPTTTPQPFTTMQPTTT---------PHSTTPHPTTTPHPTTI-- 1250
Query: 438 LASTQAQSVPVINSMGSSLTTLQPVQFSQPLHPSYQQPLMPPVQSHVTQSPFMATMAQLQ 497
T + +P + TT+QP P + P H T +P T
Sbjct: 1251 ---THSTMIPDPTTTPQPFTTMQPTTMPHPTTTPH-----PTTTPHPTTTPHPTT----- 1297
Query: 498 SPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTPTKQVFTSDTEASSES---- 553
+PH + P Y T P T T + S+ +T + TE SS +
Sbjct: 1298 TPHPTMTPDPTTTPYPTTTPDPTTTPHPTTPDPSSTPVITTVSLPTSLGTELSSPTLAPT 1357
Query: 554 ---GLHTPASQATTLHVPSQDPASIQHLQPAHRLSASPTVSSSS 594
LH + T P + I L+P+ L +SP+ SS++
Sbjct: 1358 VKPSLHPQLT--FTAPAPHTSTSQIPTLEPSPALESSPSRSSTA 1399
>gi|239757995 PREDICTED: similar to hCG1747327, partial [Homo
sapiens]
Length = 1064
Score = 47.4 bits (111), Expect = 4e-05
Identities = 77/353 (21%), Positives = 130/353 (36%), Gaps = 39/353 (11%)
Query: 304 SPGLPPPALSPSKVHGVRYGQPATSETAEVPSSSGG---PLVTVSTPLHQVSPTGLEPSH 360
+P P + ++ + + + TS PS++ P+VTV TP VS T H
Sbjct: 156 TPVTQKPVTTVTRTYPMTTTEKGTSAMISSPSTTTARETPIVTV-TPSSSVSATDTT-FH 213
Query: 361 SLLSTEAKLVSAAGGPLP---------PVSTLTALHS-LEQTSPGLNQQPQNLIMASLPG 410
+ +S+ + PLP P T L + + TSP I +++
Sbjct: 214 TTISSTTRTTERT--PLPTGSIHTTMSPTPVFTTLKTAVTSTSP---------ITSTITS 262
Query: 411 VMTIGPGEPASLGPTFTNTGASTLVIGLASTQAQSVPVINSMG------SSLTTLQPVQF 464
T+ + PT TNT +S + L+ST S + S S+L T P
Sbjct: 263 TNTVTSMTTTTSRPTATNTLSSLMSNILSSTPVPSTEMTTSHTTDTNPLSTLVTTLPTTI 322
Query: 465 SQPLHPS---YQQPLMPPVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQT 521
++ S Y V T+ + + SP Q T T + P T
Sbjct: 323 TRSTPTSETTYPASPTSTVTDSTTEITYSTVLTGTLSPTTTLPPTSSSQQTTETPMTPTT 382
Query: 522 MLITDTTNLSALASLTPTKQVFTSDTEASSESGLHTPASQAT----TLHVPSQDPASIQH 577
L+T TT ++ +SL + S S+ + P + T T VP+ D
Sbjct: 383 KLVTTTTETTSQSSLNFSSSAIYSTVSTSTTAISSLPPTSGTMVTSTNIVPTADLKPELI 442
Query: 578 LQPAHRLSASPTVSSSSLVLYQSSDSSNGQSHLLPSNHSVIETFISTQMASSS 630
L H S + SS +++ ++ L + + ++T M S++
Sbjct: 443 LLEVHDQRIQAKNPRYSQTPFTSSTATSPETTTLTCTNDISTESLTTAMTSTT 495
Score = 42.7 bits (99), Expect = 0.001
Identities = 75/345 (21%), Positives = 126/345 (36%), Gaps = 41/345 (11%)
Query: 322 YGQPATSETA--EVPSSSGGPLVTVSTPLHQVSPTGLEPSHSLLSTEAKLVSAAG----- 374
Y +TS TA +P +SG T+ T + V L+P LL + + A
Sbjct: 405 YSTVSTSTTAISSLPPTSG----TMVTSTNIVPTADLKPELILLEVHDQRIQAKNPRYSQ 460
Query: 375 -------GPLPPVSTLTALHSLEQTSPGLNQQPQNLIMASLPGVMTIGPGEPASLGPTFT 427
P +TLT + + S +++++ T+ + GPT T
Sbjct: 461 TPFTSSTATSPETTTLTCTNDISTESLTTAMTSTTPVISAITPKTTVTSMTTTASGPTTT 520
Query: 428 NTGASTLVIGLASTQAQSVPVINS------MGSSLTTLQPVQFSQPLHPS-YQQPLMP-- 478
NT +S L+ST A + VI S S+L T P ++ S P+ P
Sbjct: 521 NTLSSLTSSILSSTPAPNTEVITSHTTTTTPPSTLVTTLPTAIARSTPTSETTYPISPTG 580
Query: 479 PVQSHVTQSPFMATMAQLQSPHALYSHKPEVAQYTHTGLLPQTMLITDTTNLSALASLTP 538
V +T+ + +M S T P T L TT ++ ++ +
Sbjct: 581 TVTDSMTEITYSTSMTGTWSTATTLPLTSCSLPTIETATTPTTNLGNTTTETTSHSTPSF 640
Query: 539 TKQVFTSDTEASSESGLHTPASQATTLHVPSQDPASIQH----------LQPAHRLSASP 588
T S S+ + P S T + + +P+S+ QP+ +
Sbjct: 641 TSSAIYSTVNISTTTISSFPPSSGTMVTFTTMNPSSLSTDISTTTLKNITQPSVGSTGFL 700
Query: 589 TVSSSSLVLYQSSDSSNGQSHLLPSNHSV----IETFISTQMASS 629
T ++ + S SS + + PS S+ I T +ST +S
Sbjct: 701 TAATDLTSTFTVSSSSAMSTSVTPSAPSIQNKEISTLVSTTTTTS 745
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.126 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,811,466
Number of Sequences: 37866
Number of extensions: 1701574
Number of successful extensions: 12689
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 794
Number of HSP's that attempted gapping in prelim test: 9390
Number of HSP's gapped (non-prelim): 3231
length of query: 631
length of database: 18,247,518
effective HSP length: 108
effective length of query: 523
effective length of database: 14,157,990
effective search space: 7404628770
effective search space used: 7404628770
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.