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Search of human proteins with 134276943
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|134276943 separase [Homo sapiens]
(2120 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|134276943 separase [Homo sapiens] 4219 0.0
gi|145199237 transcription elongation factor B polypeptide 3 bin... 43 0.004
gi|188536004 zinc finger protein 469 [Homo sapiens] 42 0.006
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 41 0.014
gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens] 40 0.032
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 39 0.071
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 39 0.071
gi|91208420 bassoon protein [Homo sapiens] 38 0.092
gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens] 38 0.092
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 38 0.12
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 38 0.12
gi|221139764 PHD and ring finger domains 1 [Homo sapiens] 37 0.27
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 37 0.27
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 37 0.27
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ... 36 0.46
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ... 36 0.46
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] 35 0.78
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] 35 0.78
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] 35 0.78
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 35 0.78
gi|34486092 adenylate cyclase 5 [Homo sapiens] 35 0.78
gi|217416343 fibrosin-like 1 [Homo sapiens] 35 1.0
gi|154350236 hypothetical protein LOC56204 [Homo sapiens] 35 1.0
gi|37595548 phosphoinositol 3-phosphate-binding protein-3 [Homo ... 35 1.0
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 34 1.3
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 34 1.3
gi|93277096 limbin [Homo sapiens] 34 1.3
gi|150170699 kinesin family member 26A [Homo sapiens] 34 1.3
gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo sap... 34 1.3
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 34 1.7
>gi|134276943 separase [Homo sapiens]
Length = 2120
Score = 4219 bits (10941), Expect = 0.0
Identities = 2120/2120 (100%), Positives = 2120/2120 (100%)
Query: 1 MRSFKRVNFGTLLSSQKEAEELLPALKEFLSNPPAGFPSSRSDAERRQACDAILRACNQQ 60
MRSFKRVNFGTLLSSQKEAEELLPALKEFLSNPPAGFPSSRSDAERRQACDAILRACNQQ
Sbjct: 1 MRSFKRVNFGTLLSSQKEAEELLPALKEFLSNPPAGFPSSRSDAERRQACDAILRACNQQ 60
Query: 61 LTAKLACPRHLGSLLELAELACDGYLVSTPQRPPLYLERILFVLLRNAAAQGSPEATLRL 120
LTAKLACPRHLGSLLELAELACDGYLVSTPQRPPLYLERILFVLLRNAAAQGSPEATLRL
Sbjct: 61 LTAKLACPRHLGSLLELAELACDGYLVSTPQRPPLYLERILFVLLRNAAAQGSPEATLRL 120
Query: 121 AQPLHACLVQCSREAAPQDYEAVARGSFSLLWKGAEALLERRAAFAARLKALSFLVLLED 180
AQPLHACLVQCSREAAPQDYEAVARGSFSLLWKGAEALLERRAAFAARLKALSFLVLLED
Sbjct: 121 AQPLHACLVQCSREAAPQDYEAVARGSFSLLWKGAEALLERRAAFAARLKALSFLVLLED 180
Query: 181 ESTPCEVPHFASPTACRAVAAHQLFDASGHGLNEADADFLDDLLSRHVIRALVGERGSSS 240
ESTPCEVPHFASPTACRAVAAHQLFDASGHGLNEADADFLDDLLSRHVIRALVGERGSSS
Sbjct: 181 ESTPCEVPHFASPTACRAVAAHQLFDASGHGLNEADADFLDDLLSRHVIRALVGERGSSS 240
Query: 241 GLLSPQRALCLLELTLEHCRRFCWSRHHDKAISAVEKAHSYLRNTNLAPSLQLCQLGVKL 300
GLLSPQRALCLLELTLEHCRRFCWSRHHDKAISAVEKAHSYLRNTNLAPSLQLCQLGVKL
Sbjct: 241 GLLSPQRALCLLELTLEHCRRFCWSRHHDKAISAVEKAHSYLRNTNLAPSLQLCQLGVKL 300
Query: 301 LQVGEEGPQAVAKLLIKASAVLSKSMEAPSPPLRALYESCQFFLSGLERGTKRRYRLDAI 360
LQVGEEGPQAVAKLLIKASAVLSKSMEAPSPPLRALYESCQFFLSGLERGTKRRYRLDAI
Sbjct: 301 LQVGEEGPQAVAKLLIKASAVLSKSMEAPSPPLRALYESCQFFLSGLERGTKRRYRLDAI 360
Query: 361 LSLFAFLGGYCSLLQQLRDDGVYGGSSKQQQSFLQMYFQGLHLYTVVVYDFAQGCQIVDL 420
LSLFAFLGGYCSLLQQLRDDGVYGGSSKQQQSFLQMYFQGLHLYTVVVYDFAQGCQIVDL
Sbjct: 361 LSLFAFLGGYCSLLQQLRDDGVYGGSSKQQQSFLQMYFQGLHLYTVVVYDFAQGCQIVDL 420
Query: 421 ADLTQLVDSCKSTVVWMLEALEGLSGQELTDHMGMTASYTSNLAYSFYSHKLYAEACAIS 480
ADLTQLVDSCKSTVVWMLEALEGLSGQELTDHMGMTASYTSNLAYSFYSHKLYAEACAIS
Sbjct: 421 ADLTQLVDSCKSTVVWMLEALEGLSGQELTDHMGMTASYTSNLAYSFYSHKLYAEACAIS 480
Query: 481 EPLCQHLGLVKPGTYPEVPPEKLHRCFRLQVESLKKLGKQAQGCKMVILWLAALQPCSPE 540
EPLCQHLGLVKPGTYPEVPPEKLHRCFRLQVESLKKLGKQAQGCKMVILWLAALQPCSPE
Sbjct: 481 EPLCQHLGLVKPGTYPEVPPEKLHRCFRLQVESLKKLGKQAQGCKMVILWLAALQPCSPE 540
Query: 541 HMAEPVTFWVRVKMDAARAGDKELQLKTLRDSLSGWDPETLALLLREELQAYKAVRADTG 600
HMAEPVTFWVRVKMDAARAGDKELQLKTLRDSLSGWDPETLALLLREELQAYKAVRADTG
Sbjct: 541 HMAEPVTFWVRVKMDAARAGDKELQLKTLRDSLSGWDPETLALLLREELQAYKAVRADTG 600
Query: 601 QERFNIICDLLELSPEETPAGAWARATHLVELAQVLCYHDFTQQTNCSALDAIREALQLL 660
QERFNIICDLLELSPEETPAGAWARATHLVELAQVLCYHDFTQQTNCSALDAIREALQLL
Sbjct: 601 QERFNIICDLLELSPEETPAGAWARATHLVELAQVLCYHDFTQQTNCSALDAIREALQLL 660
Query: 661 DSVRPEAQARDQLLDDKAQALLWLYICTLEAKMQEGIERDRRAQAPGNLEEFEVNDLNYE 720
DSVRPEAQARDQLLDDKAQALLWLYICTLEAKMQEGIERDRRAQAPGNLEEFEVNDLNYE
Sbjct: 661 DSVRPEAQARDQLLDDKAQALLWLYICTLEAKMQEGIERDRRAQAPGNLEEFEVNDLNYE 720
Query: 721 DKLQEDRFLYSNIAFNLAADAAQSKCLDQALALWKELLTKGQAPAVRCLQQTAASLQILA 780
DKLQEDRFLYSNIAFNLAADAAQSKCLDQALALWKELLTKGQAPAVRCLQQTAASLQILA
Sbjct: 721 DKLQEDRFLYSNIAFNLAADAAQSKCLDQALALWKELLTKGQAPAVRCLQQTAASLQILA 780
Query: 781 ALYQLVAKPMQALEVLLLLRIVSERLKDHSKAAGSSCHITQLLLTLGCPSYAQLHLEEAA 840
ALYQLVAKPMQALEVLLLLRIVSERLKDHSKAAGSSCHITQLLLTLGCPSYAQLHLEEAA
Sbjct: 781 ALYQLVAKPMQALEVLLLLRIVSERLKDHSKAAGSSCHITQLLLTLGCPSYAQLHLEEAA 840
Query: 841 SSLKHLDQTTDTYLLLSLTCDLLRSQLYWTHQKVTKGVSLLLSVLRDPALQKSSKAWYLL 900
SSLKHLDQTTDTYLLLSLTCDLLRSQLYWTHQKVTKGVSLLLSVLRDPALQKSSKAWYLL
Sbjct: 841 SSLKHLDQTTDTYLLLSLTCDLLRSQLYWTHQKVTKGVSLLLSVLRDPALQKSSKAWYLL 900
Query: 901 RVQVLQLVAAYLSLPSNNLSHSLWEQLCAQGWQTPEIALIDSHKLLRSIILLLMGSDILS 960
RVQVLQLVAAYLSLPSNNLSHSLWEQLCAQGWQTPEIALIDSHKLLRSIILLLMGSDILS
Sbjct: 901 RVQVLQLVAAYLSLPSNNLSHSLWEQLCAQGWQTPEIALIDSHKLLRSIILLLMGSDILS 960
Query: 961 TQKAAVETSFLDYGENLVQKWQVLSEVLSCSEKLVCHLGRLGSVSEAKAFCLEALKLTTK 1020
TQKAAVETSFLDYGENLVQKWQVLSEVLSCSEKLVCHLGRLGSVSEAKAFCLEALKLTTK
Sbjct: 961 TQKAAVETSFLDYGENLVQKWQVLSEVLSCSEKLVCHLGRLGSVSEAKAFCLEALKLTTK 1020
Query: 1021 LQIPRQCALFLVLKGELELARNDIDLCQSDLQQVLFLLESCTEFGGVTQHLDSVKKVHLQ 1080
LQIPRQCALFLVLKGELELARNDIDLCQSDLQQVLFLLESCTEFGGVTQHLDSVKKVHLQ
Sbjct: 1021 LQIPRQCALFLVLKGELELARNDIDLCQSDLQQVLFLLESCTEFGGVTQHLDSVKKVHLQ 1080
Query: 1081 KGKQQAQVPCPPQLPEEELFLRGPALELVATVAKEPGPIAPSTNSSPVLKTKPQPIPNFL 1140
KGKQQAQVPCPPQLPEEELFLRGPALELVATVAKEPGPIAPSTNSSPVLKTKPQPIPNFL
Sbjct: 1081 KGKQQAQVPCPPQLPEEELFLRGPALELVATVAKEPGPIAPSTNSSPVLKTKPQPIPNFL 1140
Query: 1141 SHSPTCDCSLCASPVLTAVCLRWVLVTAGVRLAMGHQAQGLDLLQVVLKGCPEAAERLTQ 1200
SHSPTCDCSLCASPVLTAVCLRWVLVTAGVRLAMGHQAQGLDLLQVVLKGCPEAAERLTQ
Sbjct: 1141 SHSPTCDCSLCASPVLTAVCLRWVLVTAGVRLAMGHQAQGLDLLQVVLKGCPEAAERLTQ 1200
Query: 1201 ALQASLNHKTPPSLVPSLLDEILAQAYTLLALEGLNQPSNESLQKVLQSGLKFVAARIPH 1260
ALQASLNHKTPPSLVPSLLDEILAQAYTLLALEGLNQPSNESLQKVLQSGLKFVAARIPH
Sbjct: 1201 ALQASLNHKTPPSLVPSLLDEILAQAYTLLALEGLNQPSNESLQKVLQSGLKFVAARIPH 1260
Query: 1261 LEPWRASLLLIWALTKLGGLSCCTTQLFASSWGWQPPLIKSVPGSEPSKTQGQKRSGRGR 1320
LEPWRASLLLIWALTKLGGLSCCTTQLFASSWGWQPPLIKSVPGSEPSKTQGQKRSGRGR
Sbjct: 1261 LEPWRASLLLIWALTKLGGLSCCTTQLFASSWGWQPPLIKSVPGSEPSKTQGQKRSGRGR 1320
Query: 1321 QKLASAPLRLNNTSQKGLEGRGLPCTPKPPDRIRQAGPHVPFTVFEEVCPTESKPEVPQA 1380
QKLASAPLRLNNTSQKGLEGRGLPCTPKPPDRIRQAGPHVPFTVFEEVCPTESKPEVPQA
Sbjct: 1321 QKLASAPLRLNNTSQKGLEGRGLPCTPKPPDRIRQAGPHVPFTVFEEVCPTESKPEVPQA 1380
Query: 1381 PRVQQRVQTRLKVNFSDDSDLEDPVSAEAWLAEEPKRRGTASRGRGRARKGLSLKTDAVV 1440
PRVQQRVQTRLKVNFSDDSDLEDPVSAEAWLAEEPKRRGTASRGRGRARKGLSLKTDAVV
Sbjct: 1381 PRVQQRVQTRLKVNFSDDSDLEDPVSAEAWLAEEPKRRGTASRGRGRARKGLSLKTDAVV 1440
Query: 1441 APGSAPGNPGLNGRSRRAKKVASRHCEERRPQRASDQARPGPEIMRTIPEEELTDNWRKM 1500
APGSAPGNPGLNGRSRRAKKVASRHCEERRPQRASDQARPGPEIMRTIPEEELTDNWRKM
Sbjct: 1441 APGSAPGNPGLNGRSRRAKKVASRHCEERRPQRASDQARPGPEIMRTIPEEELTDNWRKM 1500
Query: 1501 SFEILRGSDGEDSASGGKTPAPGPEAASGEWELLRLDSSKKKLPSPCPDKESDKDLGPRL 1560
SFEILRGSDGEDSASGGKTPAPGPEAASGEWELLRLDSSKKKLPSPCPDKESDKDLGPRL
Sbjct: 1501 SFEILRGSDGEDSASGGKTPAPGPEAASGEWELLRLDSSKKKLPSPCPDKESDKDLGPRL 1560
Query: 1561 RLPSAPVATGLSTLDSICDSLSVAFRGISHCPPSGLYAHLCRFLALCLGHRDPYATAFLV 1620
RLPSAPVATGLSTLDSICDSLSVAFRGISHCPPSGLYAHLCRFLALCLGHRDPYATAFLV
Sbjct: 1561 RLPSAPVATGLSTLDSICDSLSVAFRGISHCPPSGLYAHLCRFLALCLGHRDPYATAFLV 1620
Query: 1621 TESVSITCRHQLLTHLHRQLSKAQKHRGSLEIADQLQGLSLQEMPGDVPLARIQRLFSFR 1680
TESVSITCRHQLLTHLHRQLSKAQKHRGSLEIADQLQGLSLQEMPGDVPLARIQRLFSFR
Sbjct: 1621 TESVSITCRHQLLTHLHRQLSKAQKHRGSLEIADQLQGLSLQEMPGDVPLARIQRLFSFR 1680
Query: 1681 ALESGHFPQPEKESFQERLALIPSGVTVCVLALATLQPGTVGNTLLLTRLEKDSPPVSVQ 1740
ALESGHFPQPEKESFQERLALIPSGVTVCVLALATLQPGTVGNTLLLTRLEKDSPPVSVQ
Sbjct: 1681 ALESGHFPQPEKESFQERLALIPSGVTVCVLALATLQPGTVGNTLLLTRLEKDSPPVSVQ 1740
Query: 1741 IPTGQNKLHLRSVLNEFDAIQKAQKENSSCTDKREWWTGRLALDHRMEVLIASLEKSVLG 1800
IPTGQNKLHLRSVLNEFDAIQKAQKENSSCTDKREWWTGRLALDHRMEVLIASLEKSVLG
Sbjct: 1741 IPTGQNKLHLRSVLNEFDAIQKAQKENSSCTDKREWWTGRLALDHRMEVLIASLEKSVLG 1800
Query: 1801 CWKGLLLPSSEEPGPAQEASRLQELLQDCGWKYPDRTLLKIMLSGAGALTPQDIQALAYG 1860
CWKGLLLPSSEEPGPAQEASRLQELLQDCGWKYPDRTLLKIMLSGAGALTPQDIQALAYG
Sbjct: 1801 CWKGLLLPSSEEPGPAQEASRLQELLQDCGWKYPDRTLLKIMLSGAGALTPQDIQALAYG 1860
Query: 1861 LCPTQPERAQELLNEAVGRLQGLTVPSNSHLVLVLDKDLQKLPWESMPSLQALPVTRLPS 1920
LCPTQPERAQELLNEAVGRLQGLTVPSNSHLVLVLDKDLQKLPWESMPSLQALPVTRLPS
Sbjct: 1861 LCPTQPERAQELLNEAVGRLQGLTVPSNSHLVLVLDKDLQKLPWESMPSLQALPVTRLPS 1920
Query: 1921 FRFLLSYSIIKEYGASPVLSQGVDPRSTFYVLNPHNNLSSTEEQFRANFSSEAGWRGVVG 1980
FRFLLSYSIIKEYGASPVLSQGVDPRSTFYVLNPHNNLSSTEEQFRANFSSEAGWRGVVG
Sbjct: 1921 FRFLLSYSIIKEYGASPVLSQGVDPRSTFYVLNPHNNLSSTEEQFRANFSSEAGWRGVVG 1980
Query: 1981 EVPRPEQVQEALTKHDLYIYAGHGAGARFLDGQAVLRLSCRAVALLFGCSSAALAVRGNL 2040
EVPRPEQVQEALTKHDLYIYAGHGAGARFLDGQAVLRLSCRAVALLFGCSSAALAVRGNL
Sbjct: 1981 EVPRPEQVQEALTKHDLYIYAGHGAGARFLDGQAVLRLSCRAVALLFGCSSAALAVRGNL 2040
Query: 2041 EGAGIVLKYIMAGCPLFLGNLWDVTDRDIDRYTEALLQGWLGAGPGAPLLYYVNQARQAP 2100
EGAGIVLKYIMAGCPLFLGNLWDVTDRDIDRYTEALLQGWLGAGPGAPLLYYVNQARQAP
Sbjct: 2041 EGAGIVLKYIMAGCPLFLGNLWDVTDRDIDRYTEALLQGWLGAGPGAPLLYYVNQARQAP 2100
Query: 2101 RLKYLIGAAPIAYGLPVSLR 2120
RLKYLIGAAPIAYGLPVSLR
Sbjct: 2101 RLKYLIGAAPIAYGLPVSLR 2120
>gi|145199237 transcription elongation factor B polypeptide 3 binding
protein 1 [Homo sapiens]
Length = 1221
Score = 42.7 bits (99), Expect = 0.004
Identities = 76/313 (24%), Positives = 112/313 (35%), Gaps = 80/313 (25%)
Query: 1301 SVPGSEPSKTQGQKRSGRGRQKLASAPLRLNNTSQKGLE--GRGLPCTPKP--------- 1349
+VPG+EP+ K K P S++GLE G GL T +
Sbjct: 295 TVPGNEPTTASTPKARADPEIKATGQP-----PSKEGLEAEGGGLRETKETAVQCDVGDL 349
Query: 1350 -PDRIRQAGPHVPFTVFEEVCPTESKPE-----VPQAPRVQQRVQTRLKVNFSDDS-DLE 1402
P + A P + + CP E KP+ P AP + Q + K +E
Sbjct: 350 QPPPAKPASPAQVQSSQDGGCPKEGKPKKKKTGAPPAPSCKDGAQGKDKTKDKGRGRPVE 409
Query: 1403 DP-VSAEAWLAEEPKRRG---------------TASRGRGR----ARKGLSLKTDAVVAP 1442
P + A P+R+ A+ G+GR AR+ D+ A
Sbjct: 410 KPRADKKGPQASSPRRKAERPEGTKKKPSSATPVATSGKGRPDRPARRPSPTSGDSRPAA 469
Query: 1443 GSAPGNPGLNGRSRRAKKVASRHCEERRPQRASDQA-RPGPEIMRTIPEEELTDNWRKMS 1501
G P P L R++ K S ER+ + + A + P++ + R +S
Sbjct: 470 GRGPPRP-LQLPDRKSTKAPSGKLVERKARSLDEGASQDAPKLKK-----------RALS 517
Query: 1502 FEILRGSDGEDSASGGKTPAPGPEAASGEWELLRLDSSKKKLPSPCPDKESDKD------ 1555
L G + ED A+G P+ P A LPS D +SD D
Sbjct: 518 HADLFGDESEDEAAGPGVPSVWPSA----------------LPSLSSDSDSDSDSSLGFP 561
Query: 1556 --LGPRLRLPSAP 1566
GP RL ++P
Sbjct: 562 EAQGPPKRLKASP 574
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 42.0 bits (97), Expect = 0.006
Identities = 63/294 (21%), Positives = 105/294 (35%), Gaps = 31/294 (10%)
Query: 1285 TQLFASSWGWQPPLIKSVPGSEPSKTQGQKRSGRGRQKLASAPLRLNNTSQKG-LEGRGL 1343
T L ++ G + + +PG +P + R + +NT++ G EG+ +
Sbjct: 2258 TGLSSTPTGDEAQAGRGLPGPDPQSRGAPPHTNPDRMPRGHSSYSPSNTARLGHREGQAV 2317
Query: 1344 PCTPKPPDRIRQAGPHVPFTVFEEVCPTESKPEVPQAPRVQQRVQTRLKVNFSDDSDL-- 1401
P P ++ AGP P + E+ + +PE P P + T++ + L
Sbjct: 2318 TAVPTEPPTLQGAGPDSPACLEGEMGTSSKEPEDPGTPETGRSGATKMPRVTCPSTGLGL 2377
Query: 1402 ----EDPVSAEAWLAEEPKRRGTAS--------------RGRGRARKGLSLKTDAVVAPG 1443
+A + ++ P+ AS + R R K T+ G
Sbjct: 2378 GRTTAPSSTASDFQSDSPQSHRNASHQTPQGDPLGPQDLKQRSRGYKKKPASTENGQWKG 2437
Query: 1444 SAPGNP---GLNGRSRRAKKVASRHCEERRPQRASDQARPGPEIM-RTIPEEELTDNW-- 1497
AP P + S R+ SRH + A P P + P E L
Sbjct: 2438 QAPHGPVTCEVCAASFRSGPGLSRHKARKHRPHPGAPAEPSPAALPAQQPLEPLAQKCQP 2497
Query: 1498 -RKMSFEILRGSDGEDSASGGKTPAPGPEAASGEWELLRLDSS--KKKLPSPCP 1548
RK S + G + + + G + P A G E+LR S ++L P P
Sbjct: 2498 PRKKSHRV-SGKERPNHSRGDPSHVTQPPPAQGSKEVLRAPGSPHSQQLHPPSP 2550
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 40.8 bits (94), Expect = 0.014
Identities = 70/286 (24%), Positives = 97/286 (33%), Gaps = 56/286 (19%)
Query: 1304 GSEPSKTQGQKRSGRGRQKLASAPLRLNNTSQKGLEGRGLPCTPKPPDRIRQAGPHVPFT 1363
G E + ++R GR +Q+ P R Q+ E KP + + P
Sbjct: 1233 GMEDGERPRRRRHGRAQQQ--DKPPRFRRLKQER-ENAARGSEGKPSLTLPASAPG---- 1285
Query: 1364 VFEEVCPTESKPEVPQAPRVQQRVQTRLKVNFSDDSDLEDPVSAEAW-LAEEPKRRGTAS 1422
P E+ V AP + R D S+ + E W A E +
Sbjct: 1286 ------PEEALTTVTVAPAPR-----RAAAKSPDLSNQNSDQANEEWETASESSDFTSER 1334
Query: 1423 RGRGRARKGLSLKTDAVVAPGSAPGN--PGLNGRSR-----RAKKVASRHCEERRPQRAS 1475
RG A + L AV PG G PG++ SR RAK ++ R +RP
Sbjct: 1335 RGDKEAPPPVLLTPKAVGTPGGGGGGAVPGISAMSRGDLSQRAKDLSKRSFSSQRPGMER 1394
Query: 1476 DQARPGPEIMRTIPEEELTDNWRKMSFEILRGSDGEDSASGGKTPAPGPEAASGEWELLR 1535
RPGP GS G S+SGG PG G
Sbjct: 1395 QNRRPGPGGK--------------------AGSSG--SSSGGGGGGPGGRTGPGR----- 1427
Query: 1536 LDSSKKKLPSPCPDKESDKDLGPRLRL-PSAPVATGLSTLDSICDS 1580
K+ PSP ++ P L L P P ++ + LD + S
Sbjct: 1428 --GDKRSWPSPKNRSRPPEERPPGLPLPPPPPSSSAVFRLDQVIHS 1471
>gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]
Length = 1007
Score = 39.7 bits (91), Expect = 0.032
Identities = 42/177 (23%), Positives = 68/177 (38%), Gaps = 22/177 (12%)
Query: 1370 PTESKPEVPQAPRVQQRVQTRLKVNFSDDSDLEDPVSAEAWLAEEPKRRGTASRGRGRAR 1429
PT+ K ++ + + R ++ + +N S D + L + K R R R + R
Sbjct: 258 PTDDKVKIEDKSKSKDRKKSPI-INESRSRDRGKKSRSPVDLRGKSKDR----RSRSKER 312
Query: 1430 KGLSLKTDAVVAPGSAPGNPGLNGRSRRAKKVASRHCEERRPQRASDQARPGPEIMRTIP 1489
K +TD P +P +G+ E R P R RPG R
Sbjct: 313 KSKRSETDKEKKPIKSPSKDASSGK------------ENRSPSR-----RPGRSPKRRSL 355
Query: 1490 EEELTDNWRKMSFEILRGSDGEDSASGGKTPAPGPEAASGEWELLRLDSSKKKLPSP 1546
+ D R+ +L + S S +T +PG A S E R + +++L SP
Sbjct: 356 SPKPRDKSRRSRSPLLNDRRSKQSKSPSRTLSPGRRAKSRSLERKRREPERRRLSSP 412
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 38.5 bits (88), Expect = 0.071
Identities = 54/214 (25%), Positives = 75/214 (35%), Gaps = 32/214 (14%)
Query: 1273 ALTKLGGLSCCTTQLFASSWGWQPPLIKSVPGSEPSKTQGQKRSGRGRQKLASAPLRLNN 1332
A KLGG C W P + PG+ +R+GR R +
Sbjct: 403 ARAKLGGRGVCGK---CGPGPWDDPARRRNPGAAARAKLAGQRAGRARARTG-------- 451
Query: 1333 TSQKGLEGRGL-PCTPKPPDRIRQAGPHVPFTVFEEVCPTESKPEVPQAPRVQQRVQTRL 1391
SQ G GRG P + P R+ + E P S+ +P+ P V TR
Sbjct: 452 -SQVGSRGRGWGPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLLPELPAVDPARDTR- 509
Query: 1392 KVNFSDDSDLEDPVSAEAWLAEEPKRRGTASRGRG---RARKGLSLKTDAVVAPGSAPGN 1448
+P +A A+ + G +G G A G + D+ ++PG PG
Sbjct: 510 ----------REPDAA----AQRTELGGRVGKGPGAPPSALPGPRPRPDS-LSPGEPPGP 554
Query: 1449 PGLNGRSRRAKKVASRHCEERRPQRASDQARPGP 1482
P VAS C R P S + R P
Sbjct: 555 PTPPPARALPAAVASARCSLRDPGGGSARIRSRP 588
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 38.5 bits (88), Expect = 0.071
Identities = 54/214 (25%), Positives = 75/214 (35%), Gaps = 32/214 (14%)
Query: 1273 ALTKLGGLSCCTTQLFASSWGWQPPLIKSVPGSEPSKTQGQKRSGRGRQKLASAPLRLNN 1332
A KLGG C W P + PG+ +R+GR R +
Sbjct: 403 ARAKLGGRGVCGK---CGPGPWDDPARRRNPGAAARAKLAGQRAGRARARTG-------- 451
Query: 1333 TSQKGLEGRGL-PCTPKPPDRIRQAGPHVPFTVFEEVCPTESKPEVPQAPRVQQRVQTRL 1391
SQ G GRG P + P R+ + E P S+ +P+ P V TR
Sbjct: 452 -SQVGSRGRGWGPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLLPELPAVDPARDTR- 509
Query: 1392 KVNFSDDSDLEDPVSAEAWLAEEPKRRGTASRGRG---RARKGLSLKTDAVVAPGSAPGN 1448
+P +A A+ + G +G G A G + D+ ++PG PG
Sbjct: 510 ----------REPDAA----AQRTELGGRVGKGPGAPPSALPGPRPRPDS-LSPGEPPGP 554
Query: 1449 PGLNGRSRRAKKVASRHCEERRPQRASDQARPGP 1482
P VAS C R P S + R P
Sbjct: 555 PTPPPARALPAAVASARCSLRDPGGGSARIRSRP 588
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 38.1 bits (87), Expect = 0.092
Identities = 61/274 (22%), Positives = 97/274 (35%), Gaps = 41/274 (14%)
Query: 1297 PLIKSVPGSEPSKTQGQKRSGRGRQKLASAPLRLNNTSQKGLEGRGLPCTPKPPDRIRQA 1356
P K + SEPSKT ++K P + + E P TPK +R+A
Sbjct: 588 PQAKPLRASEPSKTPSSV-----QEKKTRVPTKAEPMPKPPPETTPTPATPKVKSGVRRA 642
Query: 1357 GPHVPFTVFEEVCPTESKPE----VPQAPRVQQRVQTRLKVNFSDD------SDLEDPVS 1406
P P P + E P + + Q+ +S D S++ V
Sbjct: 643 EPATPVVKAVPEAPKGGEAEDLVGKPYSQDASRSPQSLSDTGYSSDGISSSQSEITGVVQ 702
Query: 1407 AEAWLAEEPKRRGTASRGRGRARKGLSLKTDAVVAPGSAPGNPGLNGRSRRAKKVASRHC 1466
E + G K S + A G AP S R+K ++S
Sbjct: 703 QEVEQLDSAGVTGPHPPSPSEIHKVGSSMRPLLQAQGLAP--------SERSKPLSSGTG 754
Query: 1467 EERRPQRASDQARP-----GPEIMRTIPEEELTDNWRKMSFE------------ILRGSD 1509
EE++ + S P E+ + E+E + WR+ + LR
Sbjct: 755 EEQKQRPHSLSITPEAFDSDEELEDILEEDEDSAEWRRRREQQDTAESSDDFGSQLRHDY 814
Query: 1510 GEDSASGGKTPAPGPEAASGEWELLRLDSSKKKL 1543
EDS+ GG +P P P+ + EL D ++++
Sbjct: 815 VEDSSEGGLSPLP-PQPPARAAELTDEDFMRRQI 847
>gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens]
Length = 681
Score = 38.1 bits (87), Expect = 0.092
Identities = 70/261 (26%), Positives = 96/261 (36%), Gaps = 65/261 (24%)
Query: 1307 PSKTQGQKRS-GRGRQKLASAPLRLNNTSQKGLEGRGLPCTPKPPDRIR-QAGPHV---- 1360
PS T GQ+R G + + +AP + S++ L P+PP + Q PHV
Sbjct: 260 PSSTAGQRRKQGLAQHREGAAPAAAPSFSEREL--------PQPPPLLSPQNAPHVALGP 311
Query: 1361 ----PFT-VFEEVCPTESKPEVPQAP-----------RVQQRVQTRLKVNFSDDSDLEDP 1404
PF V +C T +P A R Q + L + +LE
Sbjct: 312 HLRPPFLGVPSALCQTPGYGFLPPAQAEMFARQQELLRKQNLARLELPADLLRQKELESA 371
Query: 1405 ----VSAEAWL-----AEEPKRRGTASRGRGRARKGLSLKTDAVVAPGSAPGNPGLNGRS 1455
++ E L AEE +RRG A L+L PGS P P
Sbjct: 372 RPQLLAPETALRPNDGAEELQRRGALLVLNHGAAPLLALPPQG--PPGSGPPTP------ 423
Query: 1456 RRAKKVASRHCEERRPQRASDQARPGPEIMRTIPEEELTDN--WRK--MSFEILRGSDGE 1511
SR R P++ PGP R +E+T W + E + SDGE
Sbjct: 424 -------SRDSARRAPRKGG----PGPASARPSESKEMTGARLWAQDGSEDEPPKDSDGE 472
Query: 1512 D---SASGGKTPAPGPEAASG 1529
D +A G + P PG A G
Sbjct: 473 DPETAAVGCRGPTPGQAPAGG 493
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 37.7 bits (86), Expect = 0.12
Identities = 44/157 (28%), Positives = 56/157 (35%), Gaps = 41/157 (26%)
Query: 1296 PPLIKSVPGSEPSKTQGQKRSGRGRQKLASAPLRLNNTSQKGLEGRGLPCTPKPPDRIRQ 1355
PP + V + P KT +KR G +++ A L +Q R C P P R R
Sbjct: 163 PPRLADVAPTPP-KTPARKRGEEGTERMVQALTELLRRAQAPQAPRSRACEPSTPRRSRG 221
Query: 1356 AGPHVP---------FTVFEEVCPTESKPEVPQAPRVQQRVQTRLKVNFSDDSDLEDPVS 1406
P P V E T KPE P P V + QT
Sbjct: 222 RPPGRPAGPCRRKQQAVVVAEAAVTIPKPE-PPPPVVPVKHQT----------------- 263
Query: 1407 AEAWLAEE--------PKRRGTASR----GRGRARKG 1431
+W +E P+R G +SR GRGR R G
Sbjct: 264 -GSWKCKEGPGPGPGTPRRGGQSSRGGRGGRGRGRGG 299
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 37.7 bits (86), Expect = 0.12
Identities = 30/90 (33%), Positives = 35/90 (38%), Gaps = 9/90 (10%)
Query: 1441 APGSAPGNPGLNGRSRRAKKVASRHCEERRPQRASDQA--RPGPEIMRTIPEEELTDNWR 1498
+P SAP + G GR+ R RR R+S A R G R P R
Sbjct: 365 SPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPP-------R 417
Query: 1499 KMSFEILRGSDGEDSASGGKTPAPGPEAAS 1528
S + R DS SG P PGPE S
Sbjct: 418 GSSRSLSRARSSSDSGSGRGAPGPGPEPGS 447
>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
Length = 1648
Score = 36.6 bits (83), Expect = 0.27
Identities = 50/196 (25%), Positives = 74/196 (37%), Gaps = 19/196 (9%)
Query: 1299 IKSVPGSEPSKTQG-----QKRSGRGRQKLASAPLRLNNTSQKGLEGR-GLPCTPKPPDR 1352
++S+ G+EP G K G + AS R T +GL R P P+P D
Sbjct: 883 VESIFGTEPEPPLGPSSAMSKLRGAVAAEGASDTEREEPTESQGLAARLRRPSPPEPWDE 942
Query: 1353 IRQAGPHVPFTVFEEV--CPTESKPEVPQAPRVQQRVQTRLKVNFSDDSDLEDPVSAEAW 1410
A F E C T +PE P +P V Q R+ V S S+ +
Sbjct: 943 EDGASCSTFFGSEERTVTCVTVVEPEAPPSPDVLQAATHRV-VELRPPSRSRSTSSSRS- 1000
Query: 1411 LAEEPKRRGTASRGRGRARKGL-------SLKTDAVVAPGSAPGNPGLNGRSRRAKKVAS 1463
+ +R SR GR R G S ++ + P +SRR+ S
Sbjct: 1001 --RKKAKRKRVSREHGRTRSGTRSESRDRSSRSASPSVGEERPRRQRSKAKSRRSSSDRS 1058
Query: 1464 RHCEERRPQRASDQAR 1479
E + ++A D++R
Sbjct: 1059 SSRERAKRKKAKDKSR 1074
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 36.6 bits (83), Expect = 0.27
Identities = 65/290 (22%), Positives = 96/290 (33%), Gaps = 33/290 (11%)
Query: 1309 KTQGQKRSGRGRQKLASAPLRLNNTSQKGLE-----GRGLPCTPKPPDRIRQAGPHVPFT 1363
+++ +R GR R R NT ++G GR +P R R P
Sbjct: 524 RSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTP----- 578
Query: 1364 VFEEVCPTESKPEVPQAPRVQQRVQTRLKVNFSDDSDLEDPVSAEAWLAEEPKRRGTASR 1423
S+ P R + R TR + S P + P RR SR
Sbjct: 579 ----ARRGRSRSRTPARRRSRSRTPTRRR------SRSRTPARRGRSRSRTPARR--RSR 626
Query: 1424 GRGRARKGLSLKTDAVVAPGSAPGNPGLNGRSRRAKKVASRHCEERRPQRASDQARPGPE 1483
R R+ ++ A + S P GRSR R P R S ++R
Sbjct: 627 TRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTP 686
Query: 1484 IMRTIPEEELTDNWRKMSFEILRGSDGEDSASGGKTP-APGPEAASGEWELLRLDSSKKK 1542
R R S ++R S +TP G +S E + S ++
Sbjct: 687 ARRGRSRSRTPRRGRSRSRSLVR-----RGRSHSRTPQRRGRSGSSSERKNKSRTSQRRS 741
Query: 1543 LPSPCPDKESDKDLGPRLRLPSAPVATGLSTLDSICDSLSVAFRGISHCP 1592
+ P+ + + R R S+P + S L SL + G S CP
Sbjct: 742 RSNSSPEMKKSRISSRRSRSLSSPRSKAKSRL-----SLRRSLSGSSPCP 786
Score = 35.0 bits (79), Expect = 0.78
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 14/114 (12%)
Query: 1373 SKPEVPQAPRVQQRVQTRLKVNFSDDSDLEDPVSAEAWLAEEPKRRGTASRGRGRARKGL 1432
S PEV PR R Q+ DS E A L R G++S+GRG + +G
Sbjct: 1600 SSPEVKDKPRAAPRAQS------GSDSSPEPKAPAPRALPRR-SRSGSSSKGRGPSPEGS 1652
Query: 1433 SLKTDAVVAPGSAPGNPGLNGRSRRAKKVASRHCEERRPQRASDQARPGPEIMR 1486
S + S+P +P + +RR + + + R +R PE+ R
Sbjct: 1653 S-------STESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTR 1699
Score = 33.9 bits (76), Expect = 1.7
Identities = 61/274 (22%), Positives = 92/274 (33%), Gaps = 70/274 (25%)
Query: 1297 PLIKSVPGSEPSKTQGQKRSGRGRQKLASAPLRLNNTSQKGLEGRGLPCTPKPPDRIRQA 1356
P S+ GS P + RGR + S+P E + LP TP+P R
Sbjct: 1454 PSRHSLSGSSPGMKDIPRTPSRGRSECDSSP-----------EPKALPQTPRPRSR---- 1498
Query: 1357 GPHVPFTVFEEVCPTESKPEVPQAPRVQQRVQTRLKVNFSDDSDLEDPVSAEAWLAEEPK 1416
P +P + + T + +S ++ A L +
Sbjct: 1499 --------------------SPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQ--- 1535
Query: 1417 RRGTASRGRGRARKGLSLKTDAVVAPGSAPGNPGLNGRSRRAKKVASRHCEERRPQRAS- 1475
R+R G S + D V P ++P + S +K +R +S
Sbjct: 1536 ----------RSRSGSSQELD--VKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSP 1583
Query: 1476 ---DQARPGPEIMRTIPEEELTDNWRKMSFEILRGSDGEDSASGGKTPAPGP---EAASG 1529
++R P R+ E+ D R R G DS+ K PAP + SG
Sbjct: 1584 EVDSKSRLSPRRSRSGSSPEVKDKPRAAP----RAQSGSDSSPEPKAPAPRALPRRSRSG 1639
Query: 1530 EWELLRLDSSKKKLPSP--CPDKESDKDLGPRLR 1561
SSK + PSP ES + P+ R
Sbjct: 1640 -------SSSKGRGPSPEGSSSTESSPEHPPKSR 1666
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 36.6 bits (83), Expect = 0.27
Identities = 54/223 (24%), Positives = 81/223 (36%), Gaps = 31/223 (13%)
Query: 1346 TPKPPDRIRQAGPHVPFTVFEEVCPTESKPEVPQAPRVQQRVQTRLKVNFSDDSDLEDPV 1405
+P PP + R A P P P K V +P +QR PV
Sbjct: 605 SPSPPPKRRTASPPPPPKRRASPSPPP-KRRVSHSPPPKQR---------------SSPV 648
Query: 1406 SAEAWLAEEPKRRGTASRGRGRARKGLSLKTDAVVAPGSAPGNPGLNGRSRRAKKVASRH 1465
+ + K R +S R R+ S + + +P P P + ++ AS
Sbjct: 649 TKRRSPSLSSKHRKGSSPSRS-TREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSS 707
Query: 1466 CEERRPQRASDQARPGPEIMRTIPEEELTDNWRKMSFEILRGSDGEDSASGGKTPA---- 1521
+ R Q S RP + RT PE + S + +R S SG PA
Sbjct: 708 PQRR--QSPSPSTRPIRRVSRT-PEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKP 764
Query: 1522 ---PGP---EAASGEWE-LLRLDSSKKKLPSPCPDKESDKDLG 1557
P P ++ S W + + +K PSP P + SD++ G
Sbjct: 765 PAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGG 807
Score = 33.1 bits (74), Expect = 3.0
Identities = 56/273 (20%), Positives = 91/273 (33%), Gaps = 34/273 (12%)
Query: 1307 PSKTQGQKRSGRGRQKLASAPLRLNNTSQKGLEGRGLPCTP-----KPPDRIRQAGPHV- 1360
P + RS R++ +SA L +++S R P P PP + R+ P
Sbjct: 334 PPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSAS 393
Query: 1361 -PFTVFEEVCPTESKPEVPQAPRVQQRVQTRLKVNFSDDSDLEDPVSAEAWLAEEPKRRG 1419
P P P+ +P QQ +TR ++ ++ P R
Sbjct: 394 PPRRRHRPSPPATPPPKTRHSPTPQQSNRTR-----------------KSRVSVSPGR-- 434
Query: 1420 TASRGRGRARKGLSLKTDAVVAPGSAPGNPGLNGRSRRAKKVASRHCEERRPQRASDQAR 1479
+ G+ KG + AP + + K A+ ++RR R +Q
Sbjct: 435 --TSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQS 492
Query: 1480 PGPEIMRTIPEEELTDNWRKMSFEILRGSDGEDSASGGKTPAPGPEAASGEWELLRLDSS 1539
+ E+E + E+ R S S +P + S R S
Sbjct: 493 SSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSP 552
Query: 1540 ----KKKLPSPCPD--KESDKDLGPRLRLPSAP 1566
+++ PSP P + PR R PS P
Sbjct: 553 PPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPP 585
>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
sapiens]
Length = 459
Score = 35.8 bits (81), Expect = 0.46
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Query: 1412 AEEPKRRGTASRGRGRARKGLSLKTDAVVAPG--SAPGNPGLNG---RSRRAKKVASRHC 1466
AE ++ A RG GR R+ ++ A APG +P +PG R RA++ + R
Sbjct: 134 AEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRARRSSRRAL 193
Query: 1467 EERR--------PQRASDQARPGP 1482
+ R P R++ QA P P
Sbjct: 194 QPRHAAPDAPGAPSRSTSQATPPP 217
>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
sapiens]
Length = 459
Score = 35.8 bits (81), Expect = 0.46
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Query: 1412 AEEPKRRGTASRGRGRARKGLSLKTDAVVAPG--SAPGNPGLNG---RSRRAKKVASRHC 1466
AE ++ A RG GR R+ ++ A APG +P +PG R RA++ + R
Sbjct: 134 AEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATRVPRARRSSRRAL 193
Query: 1467 EERR--------PQRASDQARPGP 1482
+ R P R++ QA P P
Sbjct: 194 QPRHAAPDAPGAPSRSTSQATPPP 217
>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 35.0 bits (79), Expect = 0.78
Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 16/166 (9%)
Query: 1306 EPSKTQGQKRSGRGRQKLASAPLRLNNTSQKGLEGRGLPCTPKPPDRIRQAGPHVPFTVF 1365
EP + QG +R+ Q+ ++P T+ + RG P P+ R Q G +
Sbjct: 947 EPMEVQGAERASPEPQRENASPAP--GTTAEEAMSRGPPPAPEGGSRDEQDGASAETEPW 1004
Query: 1366 EEVCPTESKPEVPQAPRVQQRVQTRLKVNFSDDSDLEDPVSAEAWLAEEPKRRGTASRGR 1425
P E P +QQ +Q++ KV P ++A+L+ P +R +G
Sbjct: 1005 AAAVPPE------WVPIIQQDIQSQRKVK-------PQPPLSDAYLSGMPAKRRKTMQGE 1051
Query: 1426 GRARKGLSLKTDAVVAPGSAP-GNPGLNGRSRRAKKVASRHCEERR 1470
G + A A G+ P +P R A +V + ++ R
Sbjct: 1052 GPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLR 1097
>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 35.0 bits (79), Expect = 0.78
Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 16/166 (9%)
Query: 1306 EPSKTQGQKRSGRGRQKLASAPLRLNNTSQKGLEGRGLPCTPKPPDRIRQAGPHVPFTVF 1365
EP + QG +R+ Q+ ++P T+ + RG P P+ R Q G +
Sbjct: 947 EPMEVQGAERASPEPQRENASPAP--GTTAEEAMSRGPPPAPEGGSRDEQDGASAETEPW 1004
Query: 1366 EEVCPTESKPEVPQAPRVQQRVQTRLKVNFSDDSDLEDPVSAEAWLAEEPKRRGTASRGR 1425
P E P +QQ +Q++ KV P ++A+L+ P +R +G
Sbjct: 1005 AAAVPPE------WVPIIQQDIQSQRKVK-------PQPPLSDAYLSGMPAKRRKTMQGE 1051
Query: 1426 GRARKGLSLKTDAVVAPGSAP-GNPGLNGRSRRAKKVASRHCEERR 1470
G + A A G+ P +P R A +V + ++ R
Sbjct: 1052 GPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLR 1097
>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 35.0 bits (79), Expect = 0.78
Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 16/166 (9%)
Query: 1306 EPSKTQGQKRSGRGRQKLASAPLRLNNTSQKGLEGRGLPCTPKPPDRIRQAGPHVPFTVF 1365
EP + QG +R+ Q+ ++P T+ + RG P P+ R Q G +
Sbjct: 947 EPMEVQGAERASPEPQRENASPAP--GTTAEEAMSRGPPPAPEGGSRDEQDGASAETEPW 1004
Query: 1366 EEVCPTESKPEVPQAPRVQQRVQTRLKVNFSDDSDLEDPVSAEAWLAEEPKRRGTASRGR 1425
P E P +QQ +Q++ KV P ++A+L+ P +R +G
Sbjct: 1005 AAAVPPE------WVPIIQQDIQSQRKVK-------PQPPLSDAYLSGMPAKRRKTMQGE 1051
Query: 1426 GRARKGLSLKTDAVVAPGSAP-GNPGLNGRSRRAKKVASRHCEERR 1470
G + A A G+ P +P R A +V + ++ R
Sbjct: 1052 GPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLR 1097
>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
Length = 1132
Score = 35.0 bits (79), Expect = 0.78
Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 16/166 (9%)
Query: 1306 EPSKTQGQKRSGRGRQKLASAPLRLNNTSQKGLEGRGLPCTPKPPDRIRQAGPHVPFTVF 1365
EP + QG +R+ Q+ ++P T+ + RG P P+ R Q G +
Sbjct: 953 EPMEVQGAERASPEPQRENASPAP--GTTAEEAMSRGPPPAPEGGSRDEQDGASAETEPW 1010
Query: 1366 EEVCPTESKPEVPQAPRVQQRVQTRLKVNFSDDSDLEDPVSAEAWLAEEPKRRGTASRGR 1425
P E P +QQ +Q++ KV P ++A+L+ P +R +G
Sbjct: 1011 AAAVPPE------WVPIIQQDIQSQRKVK-------PQPPLSDAYLSGMPAKRRKTMQGE 1057
Query: 1426 GRARKGLSLKTDAVVAPGSAP-GNPGLNGRSRRAKKVASRHCEERR 1470
G + A A G+ P +P R A +V + ++ R
Sbjct: 1058 GPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLR 1103
>gi|34486092 adenylate cyclase 5 [Homo sapiens]
Length = 1261
Score = 35.0 bits (79), Expect = 0.78
Identities = 51/187 (27%), Positives = 68/187 (36%), Gaps = 34/187 (18%)
Query: 1374 KPEVPQAPRVQQRVQTRLKVNFSDDSDL--EDPV---------SAEAWLAE--EPKRRGT 1420
KP P+ QQR+ +R + + DD L +DP+ S AW + RG+
Sbjct: 56 KPGGAVTPQQQQRLASRWRSDDDDDPPLSGDDPLAGGFGFSFRSKSAWQERGGDDCGRGS 115
Query: 1421 ASRGRGRARKGLSLKTDAVVAPGSAPGNPGLNGRSRRAKKVASRHCEERRPQRASDQARP 1480
+ RG A G + A GSA G R + V E R RA+D+
Sbjct: 116 RRQRRGAASGGSTRAPPAGGGGGSAAAAASAGGTEVRPRSVEVGLEERRGKGRAADELEA 175
Query: 1481 GPEIMRTIPEEELTDNWRKMSFEILRGS-DGEDSASGGKTPAPGPEAASGEWELLRLDSS 1539
G + E GS DG SA G PG + G L L
Sbjct: 176 G-------------------AVEGGEGSGDGGSSADSGSGAGPGAVLSLGACCLALLQIF 216
Query: 1540 K-KKLPS 1545
+ KK PS
Sbjct: 217 RSKKFPS 223
>gi|217416343 fibrosin-like 1 [Homo sapiens]
Length = 1045
Score = 34.7 bits (78), Expect = 1.0
Identities = 40/150 (26%), Positives = 53/150 (35%), Gaps = 26/150 (17%)
Query: 1415 PKRRGTASRGRGR----ARKGLSLKTDAVVAPGSAPG--NPGLNGRSRRAKKVASRHCEE 1468
P RR A R RGR AR + + P +PG N GL G R A R
Sbjct: 7 PSRRSRAQRDRGRRREAARDARAQSPSSGDEPEPSPGKENAGLRGAPPRGAAPAPRTARP 66
Query: 1469 RRPQRASDQARPGPEIMRTIPEEELTDNWRKMSFEILRGSDGEDSASGGKTPAPGPEAAS 1528
R +R ++ EEE+ D + SF L + K A P
Sbjct: 67 PRRRRRESSSQ----------EEEVIDGFAIASFSTLEALE--------KDMALKPHERK 108
Query: 1529 GEWELLRLDSSKKKLPSPCPDKESDKDLGP 1558
+WE R K + CP E ++ P
Sbjct: 109 EKWE--RRLIKKPRESETCPPAEPSENRRP 136
>gi|154350236 hypothetical protein LOC56204 [Homo sapiens]
Length = 1076
Score = 34.7 bits (78), Expect = 1.0
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 22/140 (15%)
Query: 1452 NGRSRRAKKVASRHCEERRPQRASDQARPGPEIMRTIPEEELTDNWRKMSFEILRGSDG- 1510
N RR+ K CE+ + E++RT + ++ WRK +F L G+
Sbjct: 759 NYSQRRSIKDCLSTCEQPK----------NTEVLRTTLKH--SNVWRKHNFHSLDGTSTR 806
Query: 1511 ----EDSASGGKTPAPGPEAASGEWEL----LRLDSSKKKLPSPCPDKESDKDLGPRLRL 1562
+ +P P + SG ++L L L S + P PC + E D D+ + L
Sbjct: 807 AFHPQTGLPLLSSPVPQRKTQSGCFDLDSSLLHLKSFSSRSPRPCLNIEDDPDIHEKPFL 866
Query: 1563 -PSAPVATGLSTLDSICDSL 1581
SAP T LS L + +S+
Sbjct: 867 SSSAPPITSLSLLGNFEESV 886
>gi|37595548 phosphoinositol 3-phosphate-binding protein-3 [Homo
sapiens]
Length = 1048
Score = 34.7 bits (78), Expect = 1.0
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1295 QPPLIKSVPGSEP-SKTQGQKRSGRGRQKLASAPLRLNNTSQKGLEGRGLPCTPKP---P 1350
Q P S+P EP +KT+G+ GRG +K P R + ++ GLP P+P P
Sbjct: 191 QQPPHNSLPKPEPEAKTRGEG-DGRGCEKAERRPERPEVKKEPPVKANGLPAGPEPASEP 249
Query: 1351 DRIRQAGPHVP 1361
GP VP
Sbjct: 250 GSPYPEGPRVP 260
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 34.3 bits (77), Expect = 1.3
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Query: 654 REALQLLDSVRPEAQARDQLLDDKAQALLWLYICTLEAKMQEGIERDRRAQA-PGNLEEF 712
R+ LQ E Q + L K + L LE K Q+ + D Q G ++EF
Sbjct: 3388 RKTLQTEQEANTEGQKKMHELQSKVEDLQR----QLEEKRQQVYKLDLEGQRLQGIMQEF 3443
Query: 713 EVNDLNYEDKLQEDRFLYSNI----AFNLAADAAQSKCLDQAL 751
+ +L E+K + R LY N+ ++L +D ++ L Q +
Sbjct: 3444 QKQELEREEKRESRRILYQNLNEPTTWSLTSDRTRNWVLQQKI 3486
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 34.3 bits (77), Expect = 1.3
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Query: 654 REALQLLDSVRPEAQARDQLLDDKAQALLWLYICTLEAKMQEGIERDRRAQA-PGNLEEF 712
R+ LQ E Q + L K + L LE K Q+ + D Q G ++EF
Sbjct: 3380 RKTLQTEQEANTEGQKKMHELQSKVEDLQR----QLEEKRQQVYKLDLEGQRLQGIMQEF 3435
Query: 713 EVNDLNYEDKLQEDRFLYSNI----AFNLAADAAQSKCLDQAL 751
+ +L E+K + R LY N+ ++L +D ++ L Q +
Sbjct: 3436 QKQELEREEKRESRRILYQNLNEPTTWSLTSDRTRNWVLQQKI 3478
>gi|93277096 limbin [Homo sapiens]
Length = 1308
Score = 34.3 bits (77), Expect = 1.3
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 98 ERILFVLLRNAAAQGSPEATLRLAQPLHACLVQCSRE-AAPQDYEAVARGSFSLLWKGAE 156
E ++F+ L ++ S E LR+ Q +H C Q R A P+ V F W+ AE
Sbjct: 829 EHLIFMKLCSSVFSLSEEELLRMRQEVHGCFAQMDRSLALPKIRARVLLQQFQTAWREAE 888
Query: 157 ALLERRAAFAARLKALS 173
+ +A A L+ S
Sbjct: 889 FVKLDQAVAAPELQQQS 905
>gi|150170699 kinesin family member 26A [Homo sapiens]
Length = 1882
Score = 34.3 bits (77), Expect = 1.3
Identities = 52/174 (29%), Positives = 59/174 (33%), Gaps = 27/174 (15%)
Query: 1415 PKRRGTASRGRGRARKGLSLKTDAVVAPGSAPGNPGLNGRSRRAKKVASRHC------EE 1468
P A RG K + V SA G PG G S + S H EE
Sbjct: 1542 PSVGAKAGRGTVMGTKQALRAAHSRVHELSASGAPGRGGSSWGSADSDSGHDSGVNVGEE 1601
Query: 1469 RRPQRASDQARPGPEIMRTIPEEELTDNWRKMSFEILRGSDGEDSASGGKTPAPGPEA-- 1526
R P + A P P T P R + GSD SG PA G A
Sbjct: 1602 RPP---TGPALPSPYSKVTAPR-------RPQRYSSGHGSDNSSVLSGELPPAMGRTALF 1651
Query: 1527 ----ASGEWELLRLDSSKKKLPSPCPDKESDKDL---GPRLRLPSAPV--ATGL 1571
S +E LR DS S PD S+ G R R +P ATGL
Sbjct: 1652 HHSGGSSGYESLRRDSEATGSASSAPDSMSESGAASPGARTRSLKSPKKRATGL 1705
>gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo sapiens]
Length = 735
Score = 34.3 bits (77), Expect = 1.3
Identities = 39/148 (26%), Positives = 57/148 (38%), Gaps = 23/148 (15%)
Query: 1442 PGSAPGNPGLNGRSRRAKKVASRHCEERRPQRASDQARPGPEIMRTIPEEELTDNWRKMS 1501
PG PG+ G + + AS P +AS PGP +I ++L + R++S
Sbjct: 128 PGPQPGSAESEGLAPQGAAPASP------PTKASRTKSPGPARRLSIKMKKLPELRRRLS 181
Query: 1502 FEILR-GSDGEDSASGGKTPA----------PGPEAASGEWELLRL------DSSKKKLP 1544
R G + E +A G + PGP A G R DS ++
Sbjct: 182 LRGPRAGRERERAAPAGSVISRYHLDSSVGGPGPAAGPGGTRSPRAGYLSDGDSPERPAG 241
Query: 1545 SPCPDKESDKDLGPRLRLPSAPVATGLS 1572
P P ++GP R P A + LS
Sbjct: 242 PPSPTSFRPYEVGPAARAPPAALWGRLS 269
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 33.9 bits (76), Expect = 1.7
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 13/112 (11%)
Query: 1440 VAPGSAPGNPGLNGRSRRAKKVASRHCEERRPQRASDQARPGPEIMRTIP-EEELTDNWR 1498
+ P PG PG NG A K P R ++ PGP+ R +P L
Sbjct: 217 MGPRGPPGPPGKNGDDGEAGK----------PGRPGERGPPGPQGARGLPGTAGLPGMKG 266
Query: 1499 KMSFEILRGSDGEDSASG--GKTPAPGPEAASGEWELLRLDSSKKKLPSPCP 1548
F L G+ G+ +G G+ +PG A G+ L + + +P P
Sbjct: 267 HRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGP 318
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,502,536
Number of Sequences: 37866
Number of extensions: 4135002
Number of successful extensions: 13064
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 12879
Number of HSP's gapped (non-prelim): 293
length of query: 2120
length of database: 18,247,518
effective HSP length: 118
effective length of query: 2002
effective length of database: 13,779,330
effective search space: 27586218660
effective search space used: 27586218660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.