Guide to the Human Genome
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Name: C1orf103 Sequence: fasta or formatted (233aa) NCBI GI: 55743126
Description:

receptor-interacting factor 1 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {769aa} receptor-interacting factor 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         12           2
 C cysteine            0.4          1           1
 D aspartate           5.2         12           1
 E glutamate           9.9         23           2
 F phenylalanine       3.9          9           2
 G glycine             4.7         11           1
 H histidine           3.4          8           1
 I isoleucine          4.3         10           2
 K lysine             13.7         32           2
 L leucine             6.9         16           2
 M methionine          2.6          6           1
 N asparagine          5.6         13           1
 P proline             2.1          5           2
 Q glutamine           4.7         11           2
 R arginine            6.0         14           2
 S serine              8.2         19           2
 T threonine           7.7         18           1
 V valine              3.0          7           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.6          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   receptor-interacting factor 1 isoform 2 
C1orf103              1.000   receptor-interacting factor 1 isoform 1 
BOD1L                 0.032   biorientation of chromosomes in cell division 1-like...
ARID4A                0.032   retinoblastoma-binding protein 1 isoform I 
LOC645202             0.030   PREDICTED: hypothetical protein LOC645202 
NKTR                  0.027   natural killer-tumor recognition sequence 
GOLGB1                0.025   golgi autoantigen, golgin subfamily b, macrogolgin ...
LOC283767             0.025   golgi autoantigen, golgin subfamily a-like 
ARID4A                0.023   retinoblastoma-binding protein 1 isoform II 
STMN3                 0.023   SCG10-like-protein 
SH2D4A                0.020   SH2 domain containing 4A 
LOC727832             0.018   golgi autoantigen, golgin subfamily a-like 
LOC440243             0.018   PREDICTED: Putative golgin subfamily A member 6-lik...
DSPP                  0.018   dentin sialophosphoprotein preproprotein 
LOC283685             0.018   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC400352             0.018   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.018   PREDICTED: similar to Putative golgin subfamily A m...
NUDC                  0.018   nuclear distribution gene C homolog 
AHNAK2                0.018   AHNAK nucleoprotein 2 
STMN1                 0.016   stathmin 1 isoform a 
STMN1                 0.016   stathmin 1 isoform a 
STMN1                 0.016   stathmin 1 isoform a 
TEX15                 0.016   testis expressed 15 
AFF3                  0.016   AF4/FMR2 family, member 3 isoform 2 
AFF3                  0.016   AF4/FMR2 family, member 3 isoform 1 
PRKG1                 0.016   protein kinase, cGMP-dependent, type I isoform 1 [H...
CTAGE5                0.016   CTAGE family, member 5 isoform 3 
CTAGE5                0.016   CTAGE family, member 5 isoform 1 
CTAGE5                0.016   CTAGE family, member 5 isoform 4 
CTAGE5                0.016   CTAGE family, member 5 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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