FAM40B 32803

Name: FAM40B	Sequence: fasta or formatted (834aa)		NCBI GI: 55742705
Description: hypothetical protein LOC57464 isoform a		Not currently referenced in the text
Other entries for this name: alt prot {758aa} hypothetical protein LOC57464 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 51 3 C cysteine 2.0 17 2 D aspartate 4.9 41 2 E glutamate 8.9 74 5 F phenylalanine 4.2 35 2 G glycine 4.8 40 3 H histidine 2.0 17 1 I isoleucine 4.3 36 2 K lysine 6.0 50 2 L leucine 13.4 112 6 M methionine 2.6 22 2 N asparagine 3.7 31 2 P proline 5.5 46 4 Q glutamine 4.7 39 1 R arginine 5.8 48 2 S serine 6.8 57 2 T threonine 4.7 39 2 V valine 5.0 42 2 W tryptophan 1.4 12 1 Y tyrosine 3.0 25 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC57464 isoform a FAM40B 0.893 hypothetical protein LOC57464 isoform b FAM40A 0.679 hypothetical protein LOC85369 TTN 0.007 titin isoform N2-A LRRC68 0.006 PREDICTED: leucine rich repeat containing 68 LRRC68 0.006 PREDICTED: leucine rich repeat containing 68 LRRC68 0.006 PREDICTED: leucine rich repeat containing 68 MAP7 0.006 microtubule-associated protein 7 UBR4 0.005 retinoblastoma-associated factor 600 FAM122A 0.005 hypothetical protein LOC116224 C1orf113 0.005 SH3 domain-containing protein C1orf113 isoform 1 [H... C1orf113 0.005 SH3 domain-containing protein C1orf113 isoform 2 [H... SHANK2 0.005 SH3 and multiple ankyrin repeat domains 2 isoform 1... TRIM33 0.005 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.005 tripartite motif-containing 33 protein isoform alpha... WEE1 0.005 WEE1 tyrosine kinase isoform 1 DAZAP1 0.005 DAZ associated protein 1 isoform b ASAP3 0.004 ArfGAP with SH3 domain, ankyrin repeat and PH domai... ASAP3 0.004 ArfGAP with SH3 domain, ankyrin repeat and PH domain... LOC100132247 0.004 hypothetical protein LOC100132247 LOC728888 0.004 PREDICTED: similar to acyl-CoA synthetase medium-ch... LOC100133220 0.004 PREDICTED: hypothetical protein LIG1 0.004 DNA ligase I NPIPL3 0.004 nuclear pore complex interacting protein-like 3 [Ho... CASC3 0.004 metastatic lymph node 51 SH3D19 0.004 SH3 domain containing 19 isoform c SH3D19 0.004 SH3 domain containing 19 isoform b FAM123B 0.004 family with sequence similarity 123B HOXA11 0.004 homeobox A11 LOC100291698 0.004 PREDICTED: hypothetical protein XP_002346014 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.