Guide to the Human Genome
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Name: ZFYVE1 Sequence: fasta or formatted (362aa) NCBI GI: 30795182
Description:

zinc finger, FYVE domain containing 1 isoform 2

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [777aa] zinc finger, FYVE domain containing 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         27           2
 C cysteine            6.9         25           1
 D aspartate           6.1         22           2
 E glutamate           5.0         18           2
 F phenylalanine       3.0         11           2
 G glycine             7.2         26           2
 H histidine           3.9         14           2
 I isoleucine          2.5          9           1
 K lysine              5.5         20           2
 L leucine             5.0         18           2
 M methionine          1.4          5           1
 N asparagine          4.7         17           3
 P proline             5.5         20           1
 Q glutamine           3.0         11           1
 R arginine            6.1         22           2
 S serine              7.7         28           2
 T threonine           4.7         17           1
 V valine              8.6         31           2
 W tryptophan          2.5          9           1
 Y tyrosine            3.3         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, FYVE domain containing 1 isoform 2 [Hom... 
ZFYVE1                1.000   zinc finger, FYVE domain containing 1 isoform 1 [Hom...
RUFY1                 0.064   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.064   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.064   RUN and FYVE domain-containing 1 isoform a 
RUFY2                 0.056   RUN and FYVE domain-containing 2 isoform a 
MTMR4                 0.055   myotubularin related protein 4 
MTMR3                 0.052   myotubularin-related protein 3 isoform b 
MTMR3                 0.052   myotubularin-related protein 3 isoform c 
HGS                   0.052   hepatocyte growth factor-regulated tyrosine kinase su...
ZFYVE28               0.052   zinc finger, FYVE domain containing 28 
EEA1                  0.047   early endosome antigen 1, 162kD 
PIKFYVE               0.047   phosphatidylinositol-3-phosphate 5-kinase type III ...
ZFYVE21               0.043   zinc finger, FYVE domain containing 21 
MTMR3                 0.043   myotubularin-related protein 3 isoform a 
WDFY3                 0.042   WD repeat and FYVE domain containing 3 isoform 3 [Ho...
WDFY3                 0.042   WD repeat and FYVE domain containing 3 isoform 1 [Ho...
ZFYVE16               0.042   zinc finger, FYVE domain containing 16 
ZFYVE16               0.042   zinc finger, FYVE domain containing 16 
PLEKHF2               0.039   phafin 2 
ZFYVE26               0.038   zinc finger, FYVE domain containing 26 
FGD6                  0.038   FYVE, RhoGEF and PH domain containing 6 
WDFY1                 0.037   WD repeat and FYVE domain containing 1 
ZFYVE9                0.037   zinc finger, FYVE domain containing 9 isoform 1 [Hom...
WDFY2                 0.037   WD repeat and FYVE domain containing 2 
ZFYVE9                0.035   zinc finger, FYVE domain containing 9 isoform 3 [Hom...
ZFYVE9                0.035   zinc finger, FYVE domain containing 9 isoform 2 [Homo...
FGD5                  0.035   FYVE, RhoGEF and PH domain containing 5 
PLEKHF1               0.034   apoptosis-inducing protein D 
FYCO1                 0.034   FYVE and coiled-coil domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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