Guide to the Human Genome
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Search of human proteins with 54792133

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|54792133 hypothetical protein LOC25854 [Homo sapiens]
         (482 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|54792133 hypothetical protein LOC25854 [Homo sapiens]              978   0.0  
gi|54792131 hypothetical protein LOC25854 [Homo sapiens]              978   0.0  
gi|190886446 hypothetical protein LOC317662 [Homo sapiens]            120   4e-27
gi|239752523 PREDICTED: intestinal mucin-like, partial [Homo sap...    39   0.014
gi|92091572 dedicator of cytokinesis 4 [Homo sapiens]                  33   0.44 
gi|239744421 PREDICTED: hypothetical protein [Homo sapiens]            33   0.58 
gi|239743293 PREDICTED: mucin 12 [Homo sapiens]                        33   0.75 
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ...    33   0.75 
gi|110349786 Alstrom syndrome 1 [Homo sapiens]                         32   1.3  
gi|195963410 MEF2 activating motif and SAP domain containing tra...    32   1.3  
gi|32698970 MEF2 activating motif and SAP domain containing tran...    32   1.3  
gi|238624188 diffuse panbronchiolitis critical region 1 protein ...    32   1.7  
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]         32   1.7  
gi|150378539 piccolo isoform 1 [Homo sapiens]                          32   1.7  
gi|239754668 PREDICTED: mucin 12 [Homo sapiens]                        31   2.2  
gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens]    31   2.2  
gi|50345997 E1A binding protein p300 [Homo sapiens]                    31   2.9  
gi|239744142 PREDICTED: hypothetical protein isoform 1 [Homo sap...    31   2.9  
gi|239744140 PREDICTED: hypothetical protein [Homo sapiens]            31   2.9  
gi|157266300 membrane alanine aminopeptidase precursor [Homo sap...    31   2.9  
gi|110611914 progesterone receptor [Homo sapiens]                      30   3.7  
gi|166706885 erythrocyte membrane protein band 4.9 isoform 3 [Ho...    30   3.7  
gi|166706883 erythrocyte membrane protein band 4.9 isoform 2 [Ho...    30   3.7  
gi|166706881 erythrocyte membrane protein band 4.9 isoform 2 [Ho...    30   3.7  
gi|140561027 CASK-interacting protein CIP98 isoform 2 [Homo sapi...    30   3.7  
gi|140561024 CASK-interacting protein CIP98 isoform 1 [Homo sapi...    30   3.7  
gi|42716289 erythrocyte membrane protein band 4.1 (elliptocytosi...    30   3.7  
gi|42716291 erythrocyte membrane protein band 4.1 (elliptocytosi...    30   3.7  
gi|4758274 erythrocyte membrane protein band 4.1 (elliptocytosis...    30   3.7  
gi|239756270 PREDICTED: StAR-related lipid transfer (START) doma...    30   4.9  

>gi|54792133 hypothetical protein LOC25854 [Homo sapiens]
          Length = 482

 Score =  978 bits (2527), Expect = 0.0
 Identities = 482/482 (100%), Positives = 482/482 (100%)

Query: 1   MLFEGKVNPQTQSLLAECGEWTRRSLHLRVLGRQLILPTDKGVQHFQGSTPASAVHRPPL 60
           MLFEGKVNPQTQSLLAECGEWTRRSLHLRVLGRQLILPTDKGVQHFQGSTPASAVHRPPL
Sbjct: 1   MLFEGKVNPQTQSLLAECGEWTRRSLHLRVLGRQLILPTDKGVQHFQGSTPASAVHRPPL 60

Query: 61  SACGHSSNIRELCISGSQIVPAALSASALPGPDDTGVADLTARSSLEEEVYHVDGKIEEY 120
           SACGHSSNIRELCISGSQIVPAALSASALPGPDDTGVADLTARSSLEEEVYHVDGKIEEY
Sbjct: 61  SACGHSSNIRELCISGSQIVPAALSASALPGPDDTGVADLTARSSLEEEVYHVDGKIEEY 120

Query: 121 FAFDRKEDDDECLEQKPAQPGRKWRKLGLPPVSPRDCVKDAVAAEVFDHVWTNMVELLEE 180
           FAFDRKEDDDECLEQKPAQPGRKWRKLGLPPVSPRDCVKDAVAAEVFDHVWTNMVELLEE
Sbjct: 121 FAFDRKEDDDECLEQKPAQPGRKWRKLGLPPVSPRDCVKDAVAAEVFDHVWTNMVELLEE 180

Query: 181 LIRKHWETTLTEGKKQRETLKVAGNRFPHVLVPHAHADGASGPPSGHAEAHGISLASRLN 240
           LIRKHWETTLTEGKKQRETLKVAGNRFPHVLVPHAHADGASGPPSGHAEAHGISLASRLN
Sbjct: 181 LIRKHWETTLTEGKKQRETLKVAGNRFPHVLVPHAHADGASGPPSGHAEAHGISLASRLN 240

Query: 241 PPQIHHFSSSFYSDMNGVMTIQAKPLQRRPAYFADRTQNEKEDKASGGGAGALSSAPHRL 300
           PPQIHHFSSSFYSDMNGVMTIQAKPLQRRPAYFADRTQNEKEDKASGGGAGALSSAPHRL
Sbjct: 241 PPQIHHFSSSFYSDMNGVMTIQAKPLQRRPAYFADRTQNEKEDKASGGGAGALSSAPHRL 300

Query: 301 GRASDTHGLSPSAKKTPVPWRLPSLASDSQRLKTPNIYSDEVLRGTKLPTGVDHMASPLV 360
           GRASDTHGLSPSAKKTPVPWRLPSLASDSQRLKTPNIYSDEVLRGTKLPTGVDHMASPLV
Sbjct: 301 GRASDTHGLSPSAKKTPVPWRLPSLASDSQRLKTPNIYSDEVLRGTKLPTGVDHMASPLV 360

Query: 361 QTSRSRFPPLVTETRGQNTAVPGCRLVSYRGRHLQNRVLSAMPDGTERSRLRERTATLER 420
           QTSRSRFPPLVTETRGQNTAVPGCRLVSYRGRHLQNRVLSAMPDGTERSRLRERTATLER
Sbjct: 361 QTSRSRFPPLVTETRGQNTAVPGCRLVSYRGRHLQNRVLSAMPDGTERSRLRERTATLER 420

Query: 421 LSRPSTTHTFRQSDTPRKSSLTQMEFAAHTWTGQSILTGSQYVPKSFQRTTLTFKRRFQV 480
           LSRPSTTHTFRQSDTPRKSSLTQMEFAAHTWTGQSILTGSQYVPKSFQRTTLTFKRRFQV
Sbjct: 421 LSRPSTTHTFRQSDTPRKSSLTQMEFAAHTWTGQSILTGSQYVPKSFQRTTLTFKRRFQV 480

Query: 481 TS 482
           TS
Sbjct: 481 TS 482


>gi|54792131 hypothetical protein LOC25854 [Homo sapiens]
          Length = 482

 Score =  978 bits (2527), Expect = 0.0
 Identities = 482/482 (100%), Positives = 482/482 (100%)

Query: 1   MLFEGKVNPQTQSLLAECGEWTRRSLHLRVLGRQLILPTDKGVQHFQGSTPASAVHRPPL 60
           MLFEGKVNPQTQSLLAECGEWTRRSLHLRVLGRQLILPTDKGVQHFQGSTPASAVHRPPL
Sbjct: 1   MLFEGKVNPQTQSLLAECGEWTRRSLHLRVLGRQLILPTDKGVQHFQGSTPASAVHRPPL 60

Query: 61  SACGHSSNIRELCISGSQIVPAALSASALPGPDDTGVADLTARSSLEEEVYHVDGKIEEY 120
           SACGHSSNIRELCISGSQIVPAALSASALPGPDDTGVADLTARSSLEEEVYHVDGKIEEY
Sbjct: 61  SACGHSSNIRELCISGSQIVPAALSASALPGPDDTGVADLTARSSLEEEVYHVDGKIEEY 120

Query: 121 FAFDRKEDDDECLEQKPAQPGRKWRKLGLPPVSPRDCVKDAVAAEVFDHVWTNMVELLEE 180
           FAFDRKEDDDECLEQKPAQPGRKWRKLGLPPVSPRDCVKDAVAAEVFDHVWTNMVELLEE
Sbjct: 121 FAFDRKEDDDECLEQKPAQPGRKWRKLGLPPVSPRDCVKDAVAAEVFDHVWTNMVELLEE 180

Query: 181 LIRKHWETTLTEGKKQRETLKVAGNRFPHVLVPHAHADGASGPPSGHAEAHGISLASRLN 240
           LIRKHWETTLTEGKKQRETLKVAGNRFPHVLVPHAHADGASGPPSGHAEAHGISLASRLN
Sbjct: 181 LIRKHWETTLTEGKKQRETLKVAGNRFPHVLVPHAHADGASGPPSGHAEAHGISLASRLN 240

Query: 241 PPQIHHFSSSFYSDMNGVMTIQAKPLQRRPAYFADRTQNEKEDKASGGGAGALSSAPHRL 300
           PPQIHHFSSSFYSDMNGVMTIQAKPLQRRPAYFADRTQNEKEDKASGGGAGALSSAPHRL
Sbjct: 241 PPQIHHFSSSFYSDMNGVMTIQAKPLQRRPAYFADRTQNEKEDKASGGGAGALSSAPHRL 300

Query: 301 GRASDTHGLSPSAKKTPVPWRLPSLASDSQRLKTPNIYSDEVLRGTKLPTGVDHMASPLV 360
           GRASDTHGLSPSAKKTPVPWRLPSLASDSQRLKTPNIYSDEVLRGTKLPTGVDHMASPLV
Sbjct: 301 GRASDTHGLSPSAKKTPVPWRLPSLASDSQRLKTPNIYSDEVLRGTKLPTGVDHMASPLV 360

Query: 361 QTSRSRFPPLVTETRGQNTAVPGCRLVSYRGRHLQNRVLSAMPDGTERSRLRERTATLER 420
           QTSRSRFPPLVTETRGQNTAVPGCRLVSYRGRHLQNRVLSAMPDGTERSRLRERTATLER
Sbjct: 361 QTSRSRFPPLVTETRGQNTAVPGCRLVSYRGRHLQNRVLSAMPDGTERSRLRERTATLER 420

Query: 421 LSRPSTTHTFRQSDTPRKSSLTQMEFAAHTWTGQSILTGSQYVPKSFQRTTLTFKRRFQV 480
           LSRPSTTHTFRQSDTPRKSSLTQMEFAAHTWTGQSILTGSQYVPKSFQRTTLTFKRRFQV
Sbjct: 421 LSRPSTTHTFRQSDTPRKSSLTQMEFAAHTWTGQSILTGSQYVPKSFQRTTLTFKRRFQV 480

Query: 481 TS 482
           TS
Sbjct: 481 TS 482


>gi|190886446 hypothetical protein LOC317662 [Homo sapiens]
          Length = 582

 Score =  120 bits (300), Expect = 4e-27
 Identities = 125/477 (26%), Positives = 209/477 (43%), Gaps = 54/477 (11%)

Query: 1   MLFEGKVNPQTQSLLAECGEWTRRSLHLRVLGRQLILPTDKGVQHFQGSTPASAVHRPPL 60
           +L+E K++  T+SL  EC +WT    HLR+LGRQ+I P++    + +  +  SA +   L
Sbjct: 114 LLYEQKLSVHTKSLQEECQQWTASFPHLRILGRQIITPSEGYRLYPRSPSAVSASYETTL 173

Query: 61  SACGHSSNIRELCISGSQIVPAALSASALPGPDDTGVADLTARSSLEEE----VYHVDGK 116
           S        R+  I G  I    L  S+      + +A  ++  S+E +    +   +G 
Sbjct: 174 S------QERDSTIFG--IRGKKLHFSSSYAHKASSIAKSSSFCSMERDEEDSIIVSEGI 225

Query: 117 IEEYFAFDRKEDDDECLEQKPAQPGRKWRKLGLPPVSPRDCVKDAVAAEVFDHVWTNMVE 176
           IEEY AFD   D +E    K ++   + +KLG PP++P  C+K+ V A VFD VW  +V 
Sbjct: 226 IEEYLAFDHI-DIEEGFHGKKSEAATEKQKLGYPPIAPFYCMKEDVLAYVFDSVWCKVVS 284

Query: 177 LLEELIRKHW-------ETTLTEGKKQRETLKVAGNRFPHVL--VPHAHADGASGPPSGH 227
            +E+L R HW       E+ +   +   E+  V     P VL  VP +     +  P   
Sbjct: 285 CMEQLTRSHWEGFASDDESNVAVTRPDSESSCVLSELHPLVLPRVPQSKVLYITSNPM-- 342

Query: 228 AEAHGISLASRLNPPQIHHFSSSFYSDMNGVMTIQAKPLQRRPAYFADRTQNEKEDKASG 287
                +  ASR  P            ++N ++ +   PLQ R     D+  +  +     
Sbjct: 343 ----SLCQASRHQP------------NVNDLL-VHGMPLQPRNLSLMDKLLDLDDKLLMR 385

Query: 288 GGAGALSSA---PHR---LGRASDTHGLSPSAKKTPVPWRLPSLASDSQRLKTPNIYSDE 341
            G+  + S    P+R      +S ++ +  + ++ P P  L  +++     +TP    +E
Sbjct: 386 PGSSTILSTRNWPNRAVEFSTSSLSYTVQSTRRRNPPPRTLHPISTSHSCAETPRSV-EE 444

Query: 342 VLRGTKLPTGVDHMASPLVQTSRSR---FPPLVTETRGQNTAVPGCRLVSYRGRHLQNRV 398
           +LRG ++P   D ++SP   T  SR    PP+ T      + V   R +   G    +R 
Sbjct: 445 ILRGARVPVAPDSLSSP-SPTPLSRNNLLPPIGTAEVEHVSTVGPQRQMKPHGD--SSRA 501

Query: 399 LSAMPDGTERSRLRERTATLERLSRPSTTHTFRQSDTPRKSSLTQMEFAAHTWTGQS 455
            SA+ D     + +ER    +   RP+TT +F      R+S   +    A    G +
Sbjct: 502 QSAVVDEPNYQQPQERLLLPDFFPRPNTTQSFLLDTQYRRSCAVEYPHQARPGRGSA 558


>gi|239752523 PREDICTED: intestinal mucin-like, partial [Homo
           sapiens]
          Length = 514

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 21/200 (10%)

Query: 293 LSSAPHRLGRASDTHGLSPSAKKTPVPWRLP------------SLASDSQRLKTPNIYSD 340
           +SS P   G    +  ++PS+  T +P   P            SL + +    T  + S 
Sbjct: 212 ISSGPPTSGTIVTSITVTPSSLSTDIPLTTPTTITHHSVGSTESLLTATDLTSTFTVSSS 271

Query: 341 EVLRGTKLPTGVDHM---ASPLVQTSRSRFPPLVTETRGQNTAVPGCRLVSYRGRHLQNR 397
             +  + +P+         S LV  + +  P +       +  +    L ++ G +  + 
Sbjct: 272 SAMSTSDIPSSPSIQNTETSSLVSMTSATIPSVRPTFTSTHNTLTSSLLTTFPGTYSFSS 331

Query: 398 VLSAMPDGTERSR----LRERTATLERLSRPSTTHTFRQSDTPRKSSLTQMEFAAHTWTG 453
            +SA  DGT  +     L   T+TL   +  +T HT   S T   +  +     A T TG
Sbjct: 332 SMSASSDGTTHTETITSLPASTSTLHTTAESTTAHTTTTSFTTSTTMESPSSSVATTSTG 391

Query: 454 QSILTGSQYVPKSFQRTTLT 473
           Q+  T S       + TTLT
Sbjct: 392 QT--TFSSSTATFTETTTLT 409


>gi|92091572 dedicator of cytokinesis 4 [Homo sapiens]
          Length = 1966

 Score = 33.5 bits (75), Expect = 0.44
 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 13/102 (12%)

Query: 24   RSLHLRVLGRQLILPTDKGVQHFQGSTPASAVHRPPLS--ACGHSSNIRELCISGSQIVP 81
            R LH +++ +  ++ +  G+Q F     AS VH P  S   C +S+    +   G++++P
Sbjct: 1570 RPLHKKLVDQFFVMKSSLGIQEFSACMQASPVHFPNGSPRVCRNSAP-ASVSPDGTRVIP 1628

Query: 82   A----------ALSASALPGPDDTGVADLTARSSLEEEVYHV 113
                         S+S+L       V+++T +S   +EV+++
Sbjct: 1629 RRSPLSYPAVNRYSSSSLSSQASAEVSNITGQSESSDEVFNM 1670


>gi|239744421 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 252

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 39/168 (23%), Positives = 68/168 (40%), Gaps = 19/168 (11%)

Query: 256 NGVMTIQAKPLQR----------RPAYFADRTQNEKEDKASGGGAGALSSA-PHRLGRAS 304
           +G+  ++ +P QR          +P       +     + + GGA A+S+  P  +GR++
Sbjct: 21  DGLGAVETRPAQREAGGGPGPGDQPLLLCSVPRRSLGVRGARGGARAVSAGNPRGVGRSA 80

Query: 305 DTHGLSPSAKKTPVPWRLPSLASDSQRLKTPNIYSDEVLRGTKLPTGVDHMASPLVQTSR 364
                 P  KK     R  +  S+  ++   +      L G +       + S L   SR
Sbjct: 81  R----DPQTKKPR--GRSGAAVSEGSQVWLQHARLRSCLWGGERGQSPPELGSDLGPQSR 134

Query: 365 SRFPPLVTETRGQNTAVPGCRLVSYRGRHL--QNRVLSAMPDGTERSR 410
            R P + +     ++  PGC  V+ R RH   ++R   A P G+  SR
Sbjct: 135 RRPPGVTSSLPSLDSLGPGCTGVAQRTRHAGGRHRPGGAAPQGSPHSR 182


>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
          Length = 5478

 Score = 32.7 bits (73), Expect = 0.75
 Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 20/158 (12%)

Query: 310  SPSAKKTPVPWRLPSLASDSQRLKTPNIYSDEVLRGTKLPTGVDHMASPLVQTSRSRFPP 369
            SP++ +T +P  L +     +    P   S     GTKL       +  + +++ SR  P
Sbjct: 1363 SPASTQTGLPATLTTADLGEESTTFP---SSSGSTGTKLSPARSTTSGLVGESTPSRLSP 1419

Query: 370  LVTETRGQNTAVPGCRLVS---------YRGRHLQNRVLSAMPDGTERSRLRERTATLER 420
              TET    T +PG              Y      +  LS  P  T  S + E ++T   
Sbjct: 1420 SSTET----TTLPGSPTTPSLSEKSTTFYTSPRSPDATLS--PATTTSSGVSEESSTSH- 1472

Query: 421  LSRPSTTHTFRQSDTPRKSSLTQMEFAAHTWTGQSILT 458
             S+P +THT    D+   S L+Q    +H+  G +  T
Sbjct: 1473 -SQPGSTHTTAFPDSTTTSDLSQEPTTSHSSQGSTEAT 1509



 Score = 32.7 bits (73), Expect = 0.75
 Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 20/158 (12%)

Query: 310  SPSAKKTPVPWRLPSLASDSQRLKTPNIYSDEVLRGTKLPTGVDHMASPLVQTSRSRFPP 369
            SP++ +T +P  L +     +    P   S     GTKL       +  + +++ SR  P
Sbjct: 4003 SPASTQTGLPATLTTADLGEESTTFP---SSSGSTGTKLSPARSTTSGLVGESTPSRLSP 4059

Query: 370  LVTETRGQNTAVPGCRLVS---------YRGRHLQNRVLSAMPDGTERSRLRERTATLER 420
              TET    T +PG              Y      +  LS  P  T  S + E ++T   
Sbjct: 4060 SSTET----TTLPGSPTTPSLSEKSTTFYTSPRSPDATLS--PATTTSSGVSEESSTSH- 4112

Query: 421  LSRPSTTHTFRQSDTPRKSSLTQMEFAAHTWTGQSILT 458
             S+P +THT    D+   S L+Q    +H+  G +  T
Sbjct: 4113 -SQPGSTHTTAFPDSTTTSGLSQEPTTSHSSQGSTEAT 4149



 Score = 32.0 bits (71), Expect = 1.3
 Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 20/158 (12%)

Query: 310  SPSAKKTPVPWRLPSLASDSQRLKTPNIYSDEVLRGTKLPTGVDHMASPLVQTSRSRFPP 369
            SP++ +T +P  L +     +    P   S     GT L       +  + +++ SR  P
Sbjct: 2920 SPASTQTGLPATLTTADLGEESTTFP---SSSGSTGTTLSPARSTTSGLVGESTPSRLSP 2976

Query: 370  LVTETRGQNTAVPGCRLVS---------YRGRHLQNRVLSAMPDGTERSRLRERTATLER 420
              TET    T +PG              Y      +  LS  P  T  S + E ++T   
Sbjct: 2977 SSTET----TTLPGSPTTPSLSEKSTTFYTSPRSPDATLS--PATTTSSGVSEESSTSH- 3029

Query: 421  LSRPSTTHTFRQSDTPRKSSLTQMEFAAHTWTGQSILT 458
             S+P +THT    D+   S L+Q   A+H+  G +  T
Sbjct: 3030 -SQPGSTHTTAFPDSTTTSGLSQEPTASHSSQGSTEAT 3066



 Score = 31.2 bits (69), Expect = 2.2
 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 15/115 (13%)

Query: 371 VTETRGQNTAVPGCRLVS---------YRGRHLQNRVLSAMPDGTERSRLRERTATLERL 421
           +T    + TA+PG    +         Y      +R LS  P  T  S + E++ T    
Sbjct: 257 ITSASMETTALPGSTTTAGLSEKSTTFYSSPRSPDRTLS--PARTTSSGVSEKSTTSH-- 312

Query: 422 SRPSTTHTFRQSDTPRKSSLTQMEFAAHTWTG--QSILTGSQYVPKSFQRTTLTF 474
           SRP  THT    D+     ++Q   A+H+  G   + L+     P S    + TF
Sbjct: 313 SRPGPTHTIAFPDSTTMPGVSQESTASHSIPGSTDTTLSPGTTTPSSLGPESTTF 367



 Score = 29.6 bits (65), Expect = 6.4
 Identities = 55/254 (21%), Positives = 89/254 (35%), Gaps = 25/254 (9%)

Query: 220 ASGPPSGHAE----AHGISLASRLNPPQIHHFSSSFYSDMNGVMTIQAKPLQRRPAYFAD 275
           AS    GH+E     H   +A+   PP     +S    +          P   +  +F +
Sbjct: 462 ASSTTLGHSEESTPVHSSPVATATTPPPARSATSGHVEESTAY---HRSPGSTQTMHFPE 518

Query: 276 R--TQNEKEDKAS--GGGAGALSSAPHRLGRASDTHGLSPSAKKTPVPWRLPSLASDSQR 331
              T    E+ A+  G      SS P      + T   S         +R  S  S    
Sbjct: 519 SSTTSGHSEESATFHGSTTHTKSSTPSTTAALAHTSYHSSLGSTETTHFRDSSTISGRSE 578

Query: 332 LKTPNIYSDEVLRGTKLPTGVDHMASPLVQTSRSRFPPLVTETRGQNTAVPGCRL---VS 388
               +  S + +  T LP G    ++P V    S   P+ + +  + TA+PG      +S
Sbjct: 579 ESKASHSSPDAMATTVLPAG----STPSVLVGDSTPSPISSGSM-ETTALPGSTTKPGLS 633

Query: 389 YRGRHLQNRVLSA----MPDGTERSRLRERTATLERLSRPSTTHTFRQSDTPRKSSLTQM 444
            +     +   S     +P     S + E + T    SRP +THT     +     L+Q 
Sbjct: 634 EKSTTFYSSPRSPDTTHLPASMTSSGVSEESTTSH--SRPGSTHTTAFPGSTTMPGLSQE 691

Query: 445 EFAAHTWTGQSILT 458
             A+H+  G +  T
Sbjct: 692 STASHSSPGPTDTT 705


>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
           sapiens]
          Length = 2036

 Score = 32.7 bits (73), Expect = 0.75
 Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 20/158 (12%)

Query: 310 SPSAKKTPVPWRLPSLASDSQRLKTPNIYSDEVLRGTKLPTGVDHMASPLVQTSRSRFPP 369
           SP++ +T +P  L +     +    P   S     GTKL       +  + +++ SR  P
Sbjct: 850 SPASTQTGLPATLTTADLGEESTTFP---SSSGSTGTKLSPARSTTSGLVGESTPSRLSP 906

Query: 370 LVTETRGQNTAVPGCRLVS---------YRGRHLQNRVLSAMPDGTERSRLRERTATLER 420
             TET    T +PG              Y      +  LS  P  T  S + E ++T   
Sbjct: 907 SSTET----TTLPGSPTTPSLSEKSTTFYTSPRSPDATLS--PATTTSSGVSEESSTSH- 959

Query: 421 LSRPSTTHTFRQSDTPRKSSLTQMEFAAHTWTGQSILT 458
            S+P +THT    D+   S L+Q    +H+  G +  T
Sbjct: 960 -SQPGSTHTTAFPDSTTTSDLSQEPTTSHSSQGSTEAT 996


>gi|110349786 Alstrom syndrome 1 [Homo sapiens]
          Length = 4169

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 8/58 (13%)

Query: 49   STPASAVHRPPLSACGHSSNIRELCISGSQIVPAALSASALPGPDD--TGVADLTARS 104
            ++P+ + HR        S +  +L + GSQI   AL  S+ PGP D  TG+  +T+ S
Sbjct: 1520 TSPSYSQHR------AKSGSFYQLALLGSQIPEEALRVSSAPGPADQTTGIPTITSTS 1571


>gi|195963410 MEF2 activating motif and SAP domain containing
           transcriptional regulator isoform 1 [Homo sapiens]
          Length = 415

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 8/90 (8%)

Query: 294 SSAPHR--LGRASDTHGLSPSAKKTPVPWRLPSLASD----SQRLKTPNIYSDEVLRGTK 347
           S+A HR  L RA+DT G +P+   TP P   P+L       S  L       + + R   
Sbjct: 245 SAASHRPPLPRAADTPGTAPAPTPTPAPAAAPALTPSSGPGSAALTLEEELQEAIRRAQL 304

Query: 348 LPT-GVDHMASPLVQTSRSRFPPLVTETRG 376
           LP  G+D +    V+      PP+  +  G
Sbjct: 305 LPNRGIDDILEDQVEPD-DPLPPIPLDFPG 333


>gi|32698970 MEF2 activating motif and SAP domain containing
           transcriptional regulator isoform 2 [Homo sapiens]
          Length = 312

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 8/90 (8%)

Query: 294 SSAPHR--LGRASDTHGLSPSAKKTPVPWRLPSLASD----SQRLKTPNIYSDEVLRGTK 347
           S+A HR  L RA+DT G +P+   TP P   P+L       S  L       + + R   
Sbjct: 142 SAASHRPPLPRAADTPGTAPAPTPTPAPAAAPALTPSSGPGSAALTLEEELQEAIRRAQL 201

Query: 348 LPT-GVDHMASPLVQTSRSRFPPLVTETRG 376
           LP  G+D +    V+      PP+  +  G
Sbjct: 202 LPNRGIDDILEDQVEPD-DPLPPIPLDFPG 230


>gi|238624188 diffuse panbronchiolitis critical region 1 protein [Homo
            sapiens]
          Length = 1393

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 46/201 (22%), Positives = 74/201 (36%), Gaps = 22/201 (10%)

Query: 265  PLQRRPAYFADRTQNEKEDKASGGGAGALSSAPHRLGRASDTHGLSPSAKKTPVPWRLPS 324
            P   +P    +RT +  +   S     A  S  HR  RA+  + ++P+  +     +  +
Sbjct: 1099 PSLAKPTEHGERTTSPNDKITSS----AAESTEHR-DRATSANVITPAPAEPIKHAKRTT 1153

Query: 325  LASDSQRLKTPNIYSDEVLRGTKLPTGVDHMASPLVQTSRSRFPPLVTE----TRGQNTA 380
            LA +     T         + T+ P           +T     P L +E    T+G+NT 
Sbjct: 1154 LAHEKMTQVTE--------KSTEHPEKTTSTTEKTTRTPEK--PTLYSEKTICTKGKNTP 1203

Query: 381  VPGCRLVSYRGRHLQNRVLSAMPDGTERSRLRERTATLERLSRPSTTHTFRQSDTPRKSS 440
            VP     +     L    + A    TE     E+TA + +  +PS   T  +S T   S 
Sbjct: 1204 VPEKPTENLGNTTLTTETIKAPVKSTENP---EKTAAVTKTIKPSVKVTGDKSLTTTSSH 1260

Query: 441  LTQMEFAAHTWTGQSILTGSQ 461
            L + E      TG   L  S+
Sbjct: 1261 LNKTEVTHQVPTGSFTLITSR 1281


>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
          Length = 2968

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 52/223 (23%), Positives = 81/223 (36%), Gaps = 22/223 (9%)

Query: 208 PHVLVPHAHADGASGPPSGHAEAHGISLASRLNPPQIHHFSSSFYSDMNGVMTIQAKPLQ 267
           P  ++P + A         H+ AHG   AS +    +  +S SF  D    + ++     
Sbjct: 554 PGAVLPRSAATCGRPVADMHSAAHGSGEASAMQ--SLIKYSGSFARD---AVAVRPGGCG 608

Query: 268 RRPAYFADRTQNEKEDKASGGGAGALSSAPHRLGRASDTHGLSPSAKKTPVP-------W 320
           ++  +    T   +    S G + A +  PH  G A+   G     K+ P          
Sbjct: 609 KKSPFGGLGTMKPEPAPTSAGASRAQARLPHSGGPAA---GGGRQLKRDPERPESAKAFG 665

Query: 321 RLPSLASDSQRLKTPNIYSDEVLRGTKLPTGVDHMASPLVQTSRSRFPPLVTETRGQNTA 380
           R  S A     ++ P +     +   K   G   +   LV   RS     ++  +G   A
Sbjct: 666 REGSGAQGEAEVRHPPVGIAVAVARQKDSGGSGRLGPGLVDQERSLS---LSNVKGHGRA 722

Query: 381 VPGCRLVSYRGRHLQNRVLSAMPDGTERSRLRE--RTATLERL 421
              C  V  R RH + R+L A  D  +   LRE    A L RL
Sbjct: 723 DEDC--VDDRARHREERLLGARLDRDQEKLLRESKELADLARL 763


>gi|150378539 piccolo isoform 1 [Homo sapiens]
          Length = 5142

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 55/256 (21%), Positives = 98/256 (38%), Gaps = 40/256 (15%)

Query: 208  PHVLVPHAHADGASGPPSGHAEAHGISLASRLNPPQIHHFSSSFYSDMNGVMTIQ----- 262
            P +   H+    +     GH  +HG S +         H   +  +       +Q     
Sbjct: 4870 PTIEKSHSSPGSSKSSSEGHLRSHGPSRSQSKTSVTQTHLEDAGAAIAAAEAAVQQLRIQ 4929

Query: 263  -AKPLQRRPAYFADRTQNEKEDKASGGGAGALSSAPHRLGRASDTHGLSPSAKKT---PV 318
              KP   RPA          E   S G +G+   +    G + D+ G S +A +T   P+
Sbjct: 4930 PTKPPNHRPA----------ESSVSTGSSGSSFGS----GYSVDSEGSSSTAGETNLFPI 4975

Query: 319  PWRLPSLASDSQR-LKTPNIYSDEVLRGTKLPTGV-DHMASPLVQTSRSRFPPLVTETRG 376
            P R+  +  + Q  +K P +     L  T+  T V   +   L +  ++    L+ E   
Sbjct: 4976 P-RIGKMGQNGQEPVKQPGVGVG--LADTEAKTQVMGEIKIALKKEMKTDGEQLIVE--- 5029

Query: 377  QNTAVPGCRLVSYRGR---HLQNRVLS--AMPDGTERSRLRERTATLERLSRPSTTHTFR 431
                +  CR ++Y+ +   HL +  +    M   T++  ++++T        PS   TFR
Sbjct: 5030 ----ILQCRNITYKFKSPDHLPDLYVKIYVMNISTQKKVIKKKTRVCRHDREPSFNETFR 5085

Query: 432  QSDTPRKSSLTQMEFA 447
             S +P   SL  + F+
Sbjct: 5086 FSLSPAGHSLQILLFS 5101


>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
          Length = 1952

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 15/115 (13%)

Query: 371 VTETRGQNTAVPGCRLVS---------YRGRHLQNRVLSAMPDGTERSRLRERTATLERL 421
           +T    + TA+PG    +         Y      +R LS  P  T  S + E++ T    
Sbjct: 178 ITSASMETTALPGSTTTAGLSEKSTTFYSSPRSPDRTLS--PARTTSSGVSEKSTTSH-- 233

Query: 422 SRPSTTHTFRQSDTPRKSSLTQMEFAAHTWTG--QSILTGSQYVPKSFQRTTLTF 474
           SRP  THT    D+     ++Q   A+H+  G   + L+     P S    + TF
Sbjct: 234 SRPGPTHTIAFPDSTTMPGVSQESTASHSIPGSTDTTLSPGTTTPSSLGPESTTF 288



 Score = 29.6 bits (65), Expect = 6.4
 Identities = 55/254 (21%), Positives = 89/254 (35%), Gaps = 25/254 (9%)

Query: 220 ASGPPSGHAE----AHGISLASRLNPPQIHHFSSSFYSDMNGVMTIQAKPLQRRPAYFAD 275
           AS    GH+E     H   +A+   PP     +S    +          P   +  +F +
Sbjct: 383 ASSTTLGHSEESTPVHSSPVATATTPPPARSATSGHVEESTAY---HRSPGSTQTMHFPE 439

Query: 276 R--TQNEKEDKAS--GGGAGALSSAPHRLGRASDTHGLSPSAKKTPVPWRLPSLASDSQR 331
              T    E+ A+  G      SS P      + T   S         +R  S  S    
Sbjct: 440 SSTTSGHSEESATFHGSTTHTKSSTPSTTAALAHTSYHSSLGSTETTHFRDSSTISGRSE 499

Query: 332 LKTPNIYSDEVLRGTKLPTGVDHMASPLVQTSRSRFPPLVTETRGQNTAVPGCRL---VS 388
               +  S + +  T LP G    ++P V    S   P+ + +  + TA+PG      +S
Sbjct: 500 ESKASHSSPDAMATTVLPAG----STPSVLVGDSTPSPISSGSM-ETTALPGSTTKPGLS 554

Query: 389 YRGRHLQNRVLSA----MPDGTERSRLRERTATLERLSRPSTTHTFRQSDTPRKSSLTQM 444
            +     +   S     +P     S + E + T    SRP +THT     +     L+Q 
Sbjct: 555 EKSTTFYSSPRSPDTTHLPASMTSSGVSEESTTSH--SRPGSTHTTAFPGSTTMPGLSQE 612

Query: 445 EFAAHTWTGQSILT 458
             A+H+  G +  T
Sbjct: 613 STASHSSPGPTDTT 626


>gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens]
          Length = 861

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 15/115 (13%)

Query: 371 VTETRGQNTAVPGCRLVS---------YRGRHLQNRVLSAMPDGTERSRLRERTATLERL 421
           +T    + TA+PG    +         Y      +R LS  P  T  S + E++ T    
Sbjct: 113 ITSASMETTALPGSTTTAGLSEKSTTFYSSPRSPDRTLS--PARTTSSGVSEKSTTSH-- 168

Query: 422 SRPSTTHTFRQSDTPRKSSLTQMEFAAHTWTG--QSILTGSQYVPKSFQRTTLTF 474
           SRP  THT    D+     ++Q   A+H+  G   + L+     P S    + TF
Sbjct: 169 SRPGPTHTIAFPDSTTMPGVSQESTASHSIPGSTDTTLSPGTTTPSSLGPESTTF 223



 Score = 29.6 bits (65), Expect = 6.4
 Identities = 53/254 (20%), Positives = 88/254 (34%), Gaps = 25/254 (9%)

Query: 220 ASGPPSGHAE----AHGISLASRLNPPQIHHFSSSFYSDMNGVMTIQAKPLQRRPAYFAD 275
           AS    GH+E     H   +A+   PP     +S    +          P   +  +F +
Sbjct: 318 ASSTTLGHSEESTPVHSSPVATATTPPPARSATSGHVEESTAY---HRSPGSTQTMHFPE 374

Query: 276 R--TQNEKEDKAS--GGGAGALSSAPHRLGRASDTHGLSPSAKKTPVPWRLPSLASDSQR 331
              T    E+ A+  G      SS P      + T   S         +R  S  S    
Sbjct: 375 SSTTSGHSEESATFHGSTTHTKSSTPSTTAALAHTSYHSSLGSTETTHFRDSSTISGRSE 434

Query: 332 LKTPNIYSDEVLRGTKLPTGVDHMASPLVQTSRSRFPPLVTETRGQNTAVPGCRLVSYRG 391
               +  S + +  T LP G    ++P V    S   P+ + +  + TA+PG    +  G
Sbjct: 435 ESKASHSSPDAMATTVLPAG----STPSVLVGDSTPSPISSGSM-ETTALPGS--TTKPG 487

Query: 392 RHLQNRVLSAMPDGTERSRLRERTAT-------LERLSRPSTTHTFRQSDTPRKSSLTQM 444
              ++    + P   + + L  R  +           SRP +THT     +     L+Q 
Sbjct: 488 LSEKSTTFYSSPRSPDTTHLPARMTSSGVSEESTTSHSRPGSTHTTAFPGSTTMPGLSQE 547

Query: 445 EFAAHTWTGQSILT 458
             A+H+  G +  T
Sbjct: 548 STASHSSPGPTDTT 561


>gi|50345997 E1A binding protein p300 [Homo sapiens]
          Length = 2414

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 5/124 (4%)

Query: 196  QRETLKVAGNRFPHVLVPHAHADGASGPPSGHAEAHGISLASRLNP-PQIHHFSSSFYSD 254
            Q ++  + G + P+ L     +      P   ++    S + R+ P P  HH S    S 
Sbjct: 2288 QAQSPHLQGQQIPNSLSNQVRSPQPVPSPRPQSQPPHSSPSPRMQPQPSPHHVSPQTSSP 2347

Query: 255  MNGVMTIQAKPLQRRPAYFADRTQNEK-EDKASGGGAGALSSAPHR-LGRASDTHGLSPS 312
              G++  QA P+++   +FA   QN      AS  G   L  A    LG ++D   L+ +
Sbjct: 2348 HPGLVAAQANPMEQ--GHFASPDQNSMLSQLASNPGMANLHGASATDLGLSTDNSDLNSN 2405

Query: 313  AKKT 316
              ++
Sbjct: 2406 LSQS 2409


>gi|239744142 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 629

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 137 PAQPGRKWR-KLGLPPVSPRDCVKDAVAAEVFDHVWTNMVELLEELIRKHWETTLTEGKK 195
           P QP R+   K  LPP  P+   +  V  E+   V    V+++EEL+      T  E +K
Sbjct: 482 PPQPHRRAETKARLPPPRPQRPAETKVPEEIPPEVVQEYVDIMEELLGPSLGAT-GEPEK 540

Query: 196 QRETLKV 202
           QRE  KV
Sbjct: 541 QREEGKV 547


>gi|239744140 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 878

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 137 PAQPGRKWR-KLGLPPVSPRDCVKDAVAAEVFDHVWTNMVELLEELIRKHWETTLTEGKK 195
           P QP R+   K  LPP  P+   +  V  E+   V    V+++EEL+      T  E +K
Sbjct: 482 PPQPHRRAETKARLPPPRPQRPAETKVPEEIPPEVVQEYVDIMEELLGPSLGAT-GEPEK 540

Query: 196 QRETLKV 202
           QRE  KV
Sbjct: 541 QREEGKV 547


>gi|157266300 membrane alanine aminopeptidase precursor [Homo
           sapiens]
          Length = 967

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 30/132 (22%), Positives = 50/132 (37%), Gaps = 15/132 (11%)

Query: 8   NPQTQSLLAECGEWTRRSL-------HLRVLGRQLILPTDKGVQHFQGSTPASAVHRPPL 60
           NP + + L +   W R  L         RV  R  + P D+G+  F+GS+      +   
Sbjct: 58  NPASATTLDQSKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEAT 117

Query: 61  SA-CGHSSNIRELCISGSQIVPAALSASALPGPDDTGVADLT-------ARSSLEEEVYH 112
                HS  +      G ++V   +  S  P  D T + + T         S +++  Y 
Sbjct: 118 DVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGSLVKDSQYE 177

Query: 113 VDGKIEEYFAFD 124
           +D + E   A D
Sbjct: 178 MDSEFEGELADD 189


>gi|110611914 progesterone receptor [Homo sapiens]
          Length = 933

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 38/125 (30%), Positives = 52/125 (41%), Gaps = 26/125 (20%)

Query: 208 PHVLVPHAHADGASGPPSGHAEAHGISLA----SRLNPPQIHHFS---------SSFYSD 254
           P  L   A   GA+  P G A A G++L     SR + P++             S   + 
Sbjct: 241 PRALGGAAAGGGAAAVPPG-AAAGGVALVPKEDSRFSAPRVALVEQDAPMAPGRSPLATT 299

Query: 255 MNGVMTIQAKPLQRRPAYFADRTQNEKEDKASGGGAGALSS-APHRLGRASDTHGLSPSA 313
           +   + +   PL    A  A RT+   ED++  GGAGA S+ AP R          SP A
Sbjct: 300 VMDFIHVPILPLNH--ALLAARTRQLLEDESYDGGAGAASAFAPPR---------SSPCA 348

Query: 314 KKTPV 318
             TPV
Sbjct: 349 SSTPV 353


>gi|166706885 erythrocyte membrane protein band 4.9 isoform 3 [Homo
           sapiens]
          Length = 358

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 43/186 (23%), Positives = 71/186 (38%), Gaps = 11/186 (5%)

Query: 240 NPPQIHHFSSSFYSDMNGVMTIQAKPLQRRPAYFADRTQNEKEDKASGGGAGALSSAPHR 299
           +P Q     + ++     +  ++ +  +R+ +      + E+ED  SG    AL     R
Sbjct: 155 DPNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRER-QR 213

Query: 300 LGRASDTHGLSPSAKKTPVPWRLPSLASDSQRLKTPNIYSDEVLRGTKLPTGVDHMAS-- 357
              +  T  L     K  +   LP       R KT ++  D     T L  G    +S  
Sbjct: 214 EELSKVTSNLGKMILKEEMEKSLPI------RRKTRSL-PDRTPFHTSLHQGTSKSSSLP 266

Query: 358 PLVQTSRSRFPPLVTETRGQNTAVPGCRLVSYRGRHLQNRVLSAMPDGTERSRLRERTAT 417
              +T+ SR         G  T  PG ++  Y    + N+  + +P G +R RL ER  +
Sbjct: 267 AYGRTTLSRLQSTEFSPSGSETGSPGLQIYPYEMLVVTNKGRTKLPPGVDRMRL-ERHLS 325

Query: 418 LERLSR 423
            E  SR
Sbjct: 326 AEDFSR 331


>gi|166706883 erythrocyte membrane protein band 4.9 isoform 2 [Homo
           sapiens]
          Length = 383

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 43/186 (23%), Positives = 71/186 (38%), Gaps = 11/186 (5%)

Query: 240 NPPQIHHFSSSFYSDMNGVMTIQAKPLQRRPAYFADRTQNEKEDKASGGGAGALSSAPHR 299
           +P Q     + ++     +  ++ +  +R+ +      + E+ED  SG    AL     R
Sbjct: 180 DPNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRER-QR 238

Query: 300 LGRASDTHGLSPSAKKTPVPWRLPSLASDSQRLKTPNIYSDEVLRGTKLPTGVDHMAS-- 357
              +  T  L     K  +   LP       R KT ++  D     T L  G    +S  
Sbjct: 239 EELSKVTSNLGKMILKEEMEKSLPI------RRKTRSL-PDRTPFHTSLHQGTSKSSSLP 291

Query: 358 PLVQTSRSRFPPLVTETRGQNTAVPGCRLVSYRGRHLQNRVLSAMPDGTERSRLRERTAT 417
              +T+ SR         G  T  PG ++  Y    + N+  + +P G +R RL ER  +
Sbjct: 292 AYGRTTLSRLQSTEFSPSGSETGSPGLQIYPYEMLVVTNKGRTKLPPGVDRMRL-ERHLS 350

Query: 418 LERLSR 423
            E  SR
Sbjct: 351 AEDFSR 356


>gi|166706881 erythrocyte membrane protein band 4.9 isoform 2 [Homo
           sapiens]
          Length = 383

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 43/186 (23%), Positives = 71/186 (38%), Gaps = 11/186 (5%)

Query: 240 NPPQIHHFSSSFYSDMNGVMTIQAKPLQRRPAYFADRTQNEKEDKASGGGAGALSSAPHR 299
           +P Q     + ++     +  ++ +  +R+ +      + E+ED  SG    AL     R
Sbjct: 180 DPNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEEEEEEDDDSGEEMKALRER-QR 238

Query: 300 LGRASDTHGLSPSAKKTPVPWRLPSLASDSQRLKTPNIYSDEVLRGTKLPTGVDHMAS-- 357
              +  T  L     K  +   LP       R KT ++  D     T L  G    +S  
Sbjct: 239 EELSKVTSNLGKMILKEEMEKSLPI------RRKTRSL-PDRTPFHTSLHQGTSKSSSLP 291

Query: 358 PLVQTSRSRFPPLVTETRGQNTAVPGCRLVSYRGRHLQNRVLSAMPDGTERSRLRERTAT 417
              +T+ SR         G  T  PG ++  Y    + N+  + +P G +R RL ER  +
Sbjct: 292 AYGRTTLSRLQSTEFSPSGSETGSPGLQIYPYEMLVVTNKGRTKLPPGVDRMRL-ERHLS 350

Query: 418 LERLSR 423
            E  SR
Sbjct: 351 AEDFSR 356


>gi|140561027 CASK-interacting protein CIP98 isoform 2 [Homo
           sapiens]
          Length = 524

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 48/187 (25%), Positives = 71/187 (37%), Gaps = 34/187 (18%)

Query: 208 PHVLVPHAHADGASG-----PPSGHAEAHGISLASRLNPPQIHHFSSSFYSDMNGVMTIQ 262
           PH+  P A A  A G      PSGH +  G +        ++H   S    D+N V  + 
Sbjct: 304 PHLKSPSAEATVAGGCLLPPSPSGHPDQTGTN--QHFVMVEVHRPDSE--PDVNEVRALP 359

Query: 263 AKPLQRRPAYFADRTQNEKEDKASGGGAG-ALSSAPHRLGRASDTHGLSPSAKKTPVPWR 321
                   ++ +D  Q   ED  SG  AG A +SAP R  ++  T   S S+K+ P    
Sbjct: 360 QTRTASTLSHLSDSGQTLSED--SGVDAGEAEASAPGRGRQSVSTK--SRSSKELP---- 411

Query: 322 LPSLASDSQRLKTPNIYSDEVLRGTKLPTGVDHMASPLVQTSRSRFPPLVTETRGQNTAV 381
                            ++    G   P G+    S LV+  +S     +    G NT  
Sbjct: 412 ----------------RNERPTDGANKPPGLLEPTSTLVRVKKSAATLGIAIEGGANTRQ 455

Query: 382 PGCRLVS 388
           P  R+V+
Sbjct: 456 PLPRIVT 462


>gi|140561024 CASK-interacting protein CIP98 isoform 1 [Homo
           sapiens]
          Length = 907

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 48/187 (25%), Positives = 71/187 (37%), Gaps = 34/187 (18%)

Query: 208 PHVLVPHAHADGASG-----PPSGHAEAHGISLASRLNPPQIHHFSSSFYSDMNGVMTIQ 262
           PH+  P A A  A G      PSGH +  G +        ++H   S    D+N V  + 
Sbjct: 687 PHLKSPSAEATVAGGCLLPPSPSGHPDQTGTN--QHFVMVEVHRPDSE--PDVNEVRALP 742

Query: 263 AKPLQRRPAYFADRTQNEKEDKASGGGAG-ALSSAPHRLGRASDTHGLSPSAKKTPVPWR 321
                   ++ +D  Q   ED  SG  AG A +SAP R  ++  T   S S+K+ P    
Sbjct: 743 QTRTASTLSHLSDSGQTLSED--SGVDAGEAEASAPGRGRQSVSTK--SRSSKELP---- 794

Query: 322 LPSLASDSQRLKTPNIYSDEVLRGTKLPTGVDHMASPLVQTSRSRFPPLVTETRGQNTAV 381
                            ++    G   P G+    S LV+  +S     +    G NT  
Sbjct: 795 ----------------RNERPTDGANKPPGLLEPTSTLVRVKKSAATLGIAIEGGANTRQ 838

Query: 382 PGCRLVS 388
           P  R+V+
Sbjct: 839 PLPRIVT 845


>gi|42716289 erythrocyte membrane protein band 4.1 (elliptocytosis
           1, RH-linked) isoform 1 [Homo sapiens]
          Length = 775

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 9/77 (11%)

Query: 252 YSDMNGVMTIQAKPLQRRPAYFADRTQNEKEDKASGGGAGALS--------SAPH-RLGR 302
           YS      T QA  L  RPA   +RT +++  ++  G A   S        SAP    G+
Sbjct: 474 YSGRTQAQTRQASALIDRPAPHFERTASKRASRSLDGAAAVDSADRSPRPTSAPAITQGQ 533

Query: 303 ASDTHGLSPSAKKTPVP 319
            ++   L  SAKKT VP
Sbjct: 534 VAEGGVLDASAKKTVVP 550


>gi|42716291 erythrocyte membrane protein band 4.1 (elliptocytosis
           1, RH-linked) isoform 2 [Homo sapiens]
          Length = 641

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 9/77 (11%)

Query: 252 YSDMNGVMTIQAKPLQRRPAYFADRTQNEKEDKASGGGAGALS--------SAPH-RLGR 302
           YS      T QA  L  RPA   +RT +++  ++  G A   S        SAP    G+
Sbjct: 300 YSGRTQAQTRQASALIDRPAPHFERTASKRASRSLDGAAAVDSADRSPRPTSAPAITQGQ 359

Query: 303 ASDTHGLSPSAKKTPVP 319
            ++   L  SAKKT VP
Sbjct: 360 VAEGGVLDASAKKTVVP 376


>gi|4758274 erythrocyte membrane protein band 4.1 (elliptocytosis 1,
           RH-linked) isoform 3 [Homo sapiens]
          Length = 588

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 9/77 (11%)

Query: 252 YSDMNGVMTIQAKPLQRRPAYFADRTQNEKEDKASGGGAGALS--------SAPH-RLGR 302
           YS      T QA  L  RPA   +RT +++  ++  G A   S        SAP    G+
Sbjct: 300 YSGRTQAQTRQASALIDRPAPHFERTASKRASRSLDGAAAVDSADRSPRPTSAPAITQGQ 359

Query: 303 ASDTHGLSPSAKKTPVP 319
            ++   L  SAKKT VP
Sbjct: 360 VAEGGVLDASAKKTVVP 376


>gi|239756270 PREDICTED: StAR-related lipid transfer (START) domain
            containing 9 [Homo sapiens]
          Length = 4614

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 14/99 (14%)

Query: 233  ISLASRLNPPQIHHFSSSFYSDM--NGVMTIQAKPLQ-RRPAYFADRTQNEKEDKASGG- 288
            I + SRL PP + H S    +      V + +  PL  R P+ +  RT+N  E  AS G 
Sbjct: 3923 IGVQSRLLPPPLRHRSQRLGNSFVPEKVASPEHCPLSGREPSQWQSRTENGGESSASPGE 3982

Query: 289  ----------GAGALSSAPHRLGRASDTHGLSPSAKKTP 317
                        G    +P  +   +DT GL  SA   P
Sbjct: 3983 PQRTLDRPSSWGGLQHLSPCPVSELTDTAGLRGSALGLP 4021


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.130    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,740,960
Number of Sequences: 37866
Number of extensions: 1020011
Number of successful extensions: 3511
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 3441
Number of HSP's gapped (non-prelim): 149
length of query: 482
length of database: 18,247,518
effective HSP length: 106
effective length of query: 376
effective length of database: 14,233,722
effective search space: 5351879472
effective search space used: 5351879472
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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