Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: EPB49 Sequence: fasta or formatted (358aa) NCBI GI: 166706885
Description:

erythrocyte membrane protein band 4.9 isoform 3

Referenced in:

LIM Domain Proteins
Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [405aa] erythrocyte membrane protein band 4.9 isoform 1
alt prot [405aa] erythrocyte membrane protein band 4.9 isoform 1
alt prot [405aa] erythrocyte membrane protein band 4.9 isoform 1
alt prot [383aa] erythrocyte membrane protein band 4.9 isoform 2
alt prot [383aa] erythrocyte membrane protein band 4.9 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         19           2
 C cysteine            0.3          1           1
 D aspartate           4.5         16           3
 E glutamate          10.3         37           7
 F phenylalanine       2.5          9           1
 G glycine             4.5         16           2
 H histidine           2.5          9           2
 I isoleucine          4.2         15           2
 K lysine              7.8         28           3
 L leucine             8.9         32           2
 M methionine          2.5          9           1
 N asparagine          1.7          6           1
 P proline            10.1         36           3
 Q glutamine           3.1         11           1
 R arginine            8.1         29           2
 S serine             11.2         40           3
 T threonine           5.9         21           2
 V valine              3.1         11           2
 W tryptophan          1.1          4           1
 Y tyrosine            2.5          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   erythrocyte membrane protein band 4.9 isoform 3 [Ho... 
EPB49                 0.983   erythrocyte membrane protein band 4.9 isoform 2 [Ho...
EPB49                 0.983   erythrocyte membrane protein band 4.9 isoform 2 [Ho...
EPB49                 0.966   erythrocyte membrane protein band 4.9 isoform 1 [Ho...
EPB49                 0.966   erythrocyte membrane protein band 4.9 isoform 1 [Ho...
EPB49                 0.966   erythrocyte membrane protein band 4.9 isoform 1 [Ho...
ABLIM1                0.344   actin-binding LIM protein 1 isoform s 
ABLIM1                0.334   actin-binding LIM protein 1 isoform c 
ABLIM1                0.334   actin-binding LIM protein 1 isoform b 
ABLIM1                0.334   actin-binding LIM protein 1 isoform a 
ABLIM3                0.232   actin binding LIM protein family, member 3 
ABLIM2                0.175   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.160   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.140   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.112   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.099   actin binding LIM protein family, member 2 isoform ...
ABLIM2                0.099   actin binding LIM protein family, member 2 isoform ...
VIL1                  0.056   villin 1 
ABLIM2                0.053   actin binding LIM protein family, member 2 isoform ...
VILL                  0.029   villin-like protein 
SVIL                  0.027   supervillin isoform 2 
SVIL                  0.027   supervillin isoform 1 
BSN                   0.026   bassoon protein 
AVIL                  0.024   advillin 
FMN2                  0.021   formin 2 
RAI14                 0.020   retinoic acid induced 14 isoform d 
RAI14                 0.020   retinoic acid induced 14 isoform c 
RAI14                 0.020   retinoic acid induced 14 isoform b 
RAI14                 0.020   retinoic acid induced 14 isoform a 
RAI14                 0.020   retinoic acid induced 14 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press