Guide to the Human Genome
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Name: CDC2L6 Sequence: fasta or formatted (502aa) NCBI GI: 30387611
Description:

cell division cycle 2-like 6 (CDK8-like)

Referenced in:

Cyclins and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         36           3
 C cysteine            1.0          5           1
 D aspartate           6.2         31           2
 E glutamate           5.2         26           2
 F phenylalanine       3.6         18           1
 G glycine             6.4         32           2
 H histidine           4.0         20           2
 I isoleucine          4.2         21           2
 K lysine              7.2         36           2
 L leucine             9.0         45           3
 M methionine          2.2         11           1
 N asparagine          3.2         16           1
 P proline             7.4         37           3
 Q glutamine           7.6         38           5
 R arginine            5.2         26           2
 S serine              7.6         38           4
 T threonine           3.8         19           2
 V valine              4.2         21           3
 W tryptophan          1.2          6           1
 Y tyrosine            4.0         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cell division cycle 2-like 6 (CDK8-like) 
CDK8                  0.749   cyclin-dependent kinase 8 
CDK3                  0.179   cyclin-dependent kinase 3 
CDC2L1                0.176   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.176   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.176   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.176   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.176   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.176   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L2                0.174   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.174   cell division cycle 2-like 2 isoform 1 
CDK2                  0.174   cyclin-dependent kinase 2 isoform 1 
CDC2                  0.173   cell division cycle 2 isoform 1 
CDC2                  0.171   cell division cycle 2 isoform 3 
CDK10                 0.170   cyclin-dependent kinase 10 isoform a 
CDK5                  0.165   cyclin-dependent kinase 5 
CRKRS                 0.159   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.159   Cdc2-related kinase, arginine/serine-rich isoform 1...
CDK7                  0.159   cyclin-dependent kinase 7 
CDK10                 0.154   cyclin-dependent kinase 10 isoform b 
CDK10                 0.152   cyclin-dependent kinase 10 isoform d 
CDC2L5                0.152   cell division cycle 2-like 5 isoform 1 
CDC2L5                0.152   cell division cycle 2-like 5 isoform 2 
PCTK2                 0.150   PCTAIRE protein kinase 2 
CDK4                  0.148   cyclin-dependent kinase 4 
CDK9                  0.146   cyclin-dependent kinase 9 
CDK10                 0.143   cyclin-dependent kinase 10 isoform c 
PCTK1                 0.143   PCTAIRE protein kinase 1 isoform 2 
PCTK1                 0.143   PCTAIRE protein kinase 1 isoform 1 
CDK6                  0.142   cyclin-dependent kinase 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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