Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: UQCRB Sequence: fasta or formatted (111aa) NCBI GI: 5454152
Description:

ubiquinol-cytochrome c reductase binding protein

Referenced in:

Oxidative Phosphorylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2          8           2
 C cysteine            0.0          0           0
 D aspartate           6.3          7           2
 E glutamate          12.6         14           3
 F phenylalanine       2.7          3           1
 G glycine             4.5          5           1
 H histidine           0.9          1           1
 I isoleucine          5.4          6           1
 K lysine             11.7         13           2
 L leucine             9.9         11           1
 M methionine          2.7          3           1
 N asparagine          5.4          6           1
 P proline             2.7          3           1
 Q glutamine           2.7          3           1
 R arginine            9.0         10           2
 S serine              1.8          2           1
 T threonine           1.8          2           1
 V valine              2.7          3           1
 W tryptophan          3.6          4           1
 Y tyrosine            6.3          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquinol-cytochrome c reductase binding protein [Hom... 
LOC727947             0.918   PREDICTED: similar to ubiquinol-cytochrome c reduct...
LOC727947             0.918   PREDICTED: similar to ubiquinol-cytochrome c reduct...
MAP7D3                0.034   MAP7 domain containing 3 
AADAT                 0.029   kynurenine aminotransferase II 
AADAT                 0.029   kynurenine aminotransferase II 
KIF20B                0.029   M-phase phosphoprotein 1 
YEATS2                0.029   YEATS domain containing 2 
CEP290                0.024   centrosomal protein 290kDa 
SFI1                  0.024   spindle assembly associated Sfi1 homolog isoform a [...
SFI1                  0.024   spindle assembly associated Sfi1 homolog isoform b [...
RABEP2                0.024   rabaptin, RAB GTPase binding effector protein 2 [Ho...
PRPF39                0.019   PRP39 pre-mRNA processing factor 39 homolog 
NUCB2                 0.014   nucleobindin 2 
DDHD1                 0.014   DDHD domain containing 1 isoform c 
DDHD1                 0.014   DDHD domain containing 1 isoform b 
DDHD1                 0.014   DDHD domain containing 1 isoform a 
HMMR                  0.014   hyaluronan-mediated motility receptor isoform d [Ho...
HMMR                  0.014   hyaluronan-mediated motility receptor isoform a [Ho...
HMMR                  0.014   hyaluronan-mediated motility receptor isoform c [Ho...
HMMR                  0.014   hyaluronan-mediated motility receptor isoform b [Ho...
STUB1                 0.010   STIP1 homology and U-box containing protein 1 
SYNE1                 0.010   spectrin repeat containing, nuclear envelope 1 isofo...
SYNE1                 0.010   spectrin repeat containing, nuclear envelope 1 isof...
NCOR2                 0.010   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.010   nuclear receptor co-repressor 2 isoform 1 
PABPC4                0.010   poly A binding protein, cytoplasmic 4 isoform 3 [Ho...
PABPC4                0.010   poly A binding protein, cytoplasmic 4 isoform 2 [Homo...
PABPC4                0.010   poly A binding protein, cytoplasmic 4 isoform 1 [Ho...
ATP5F1                0.010   ATP synthase, H+ transporting, mitochondrial F0 comp...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press