Search of human proteins with 5453852

Search of human proteins with 5453852

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5453852 pre-B-cell leukemia homeobox 3 isoform 1 [Homo
sapiens]
         (434 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5453852 pre-B-cell leukemia homeobox 3 isoform 1 [Homo sapiens]    871   0.0  
gi|198041755 pre-B-cell leukemia homeobox 3 isoform 2 [Homo sapi...   717   0.0  
gi|4505623 pre-B-cell leukemia homeobox 1 [Homo sapiens]              712   0.0  
gi|27436887 pre-B-cell leukemia homeobox 2 [Homo sapiens]             631   0.0  
gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens]             489   e-138
gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens]                   66   7e-11
gi|57863279 Meis1, myeloid ecotropic viral integration site 1 ho...    62   1e-09
gi|27502383 Meis homeobox 2 isoform h [Homo sapiens]                   61   2e-09
gi|27502381 Meis homeobox 2 isoform g [Homo sapiens]                   61   2e-09
gi|24762244 Meis homeobox 2 isoform a [Homo sapiens]                   61   2e-09
gi|24762250 Meis homeobox 2 isoform d [Homo sapiens]                   61   2e-09
gi|24762241 Meis homeobox 2 isoform c [Homo sapiens]                   61   2e-09
gi|24762246 Meis homeobox 2 isoform b [Homo sapiens]                   61   2e-09
gi|24762225 Meis homeobox 2 isoform f [Homo sapiens]                   61   2e-09
gi|4505151 Meis homeobox 1 [Homo sapiens]                              61   2e-09
gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens]                    61   2e-09
gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo ...    56   7e-08
gi|28178843 TG-interacting factor isoform a [Homo sapiens]             54   3e-07
gi|4507473 TG-interacting factor isoform c [Homo sapiens]              54   3e-07
gi|28178855 TG-interacting factor isoform d [Homo sapiens]             54   3e-07
gi|28178853 TG-interacting factor isoform d [Homo sapiens]             54   3e-07
gi|28178851 TG-interacting factor isoform d [Homo sapiens]             54   3e-07
gi|28178857 TG-interacting factor isoform d [Homo sapiens]             54   3e-07
gi|28178849 TG-interacting factor isoform c [Homo sapiens]             54   3e-07
gi|28178845 TG-interacting factor isoform b [Homo sapiens]             54   3e-07
gi|219275578 SIX homeobox 2 [Homo sapiens]                             53   5e-07
gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens]              53   6e-07
gi|7705555 iroquois homeobox 4 [Homo sapiens]                          52   8e-07
gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo ...    51   2e-06
gi|42544241 iroquois homeobox protein 6 [Homo sapiens]                 50   4e-06

>gi|5453852 pre-B-cell leukemia homeobox 3 isoform 1 [Homo sapiens]
          Length = 434

 Score =  871 bits (2251), Expect = 0.0
 Identities = 434/434 (100%), Positives = 434/434 (100%)

Query: 1   MDDQSRMLQTLAGVNLAGHSVQGGMALPPPPHGHEGADGDGRKQDIGDILHQIMTITDQS 60
           MDDQSRMLQTLAGVNLAGHSVQGGMALPPPPHGHEGADGDGRKQDIGDILHQIMTITDQS
Sbjct: 1   MDDQSRMLQTLAGVNLAGHSVQGGMALPPPPHGHEGADGDGRKQDIGDILHQIMTITDQS 60

Query: 61  LDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGV 120
           LDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGV
Sbjct: 61  LDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGV 120

Query: 121 SGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTH 180
           SGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTH
Sbjct: 121 SGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTH 180

Query: 181 VMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRR 240
           VMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRR
Sbjct: 181 VMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRR 240

Query: 241 NFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKF 300
           NFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKF
Sbjct: 241 NFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKF 300

Query: 301 QEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGD 360
           QEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGD
Sbjct: 301 QEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGD 360

Query: 361 SYQGSQVGANVQSQVDTLRHVINQTGGYSDGLGGNSLYSPHNLNANGGWQDATTPSSVTS 420
           SYQGSQVGANVQSQVDTLRHVINQTGGYSDGLGGNSLYSPHNLNANGGWQDATTPSSVTS
Sbjct: 361 SYQGSQVGANVQSQVDTLRHVINQTGGYSDGLGGNSLYSPHNLNANGGWQDATTPSSVTS 420

Query: 421 PTEGPGSVHSDTSN 434
           PTEGPGSVHSDTSN
Sbjct: 421 PTEGPGSVHSDTSN 434


>gi|198041755 pre-B-cell leukemia homeobox 3 isoform 2 [Homo
           sapiens]
          Length = 359

 Score =  717 bits (1850), Expect = 0.0
 Identities = 359/359 (100%), Positives = 359/359 (100%)

Query: 76  MKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAA 135
           MKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAA
Sbjct: 1   MKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAA 60

Query: 136 AAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPIS 195
           AAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPIS
Sbjct: 61  AAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPIS 120

Query: 196 PKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFY 255
           PKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFY
Sbjct: 121 PKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFY 180

Query: 256 SHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTA 315
           SHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTA
Sbjct: 181 SHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTA 240

Query: 316 AHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQV 375
           AHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQV
Sbjct: 241 AHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQV 300

Query: 376 DTLRHVINQTGGYSDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTSN 434
           DTLRHVINQTGGYSDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTSN
Sbjct: 301 DTLRHVINQTGGYSDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTSN 359


>gi|4505623 pre-B-cell leukemia homeobox 1 [Homo sapiens]
          Length = 430

 Score =  712 bits (1838), Expect = 0.0
 Identities = 366/440 (83%), Positives = 396/440 (90%), Gaps = 16/440 (3%)

Query: 1   MDDQSRMLQTLAGVNLAGHSVQGGMALPPPPHGHEGADGD----GRKQDIGDILHQIMTI 56
           MD+Q R++ + AGV +AGH    G++     H  +GA G     GRKQDIGDIL QIMTI
Sbjct: 1   MDEQPRLMHSHAGVGMAGHP---GLS----QHLQDGAGGTEGEGGRKQDIGDILQQIMTI 53

Query: 57  TDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLL 116
           TDQSLDEAQA+KHALNCHRMKPALF+VLCEIKEKT LSIRGAQEE+P DPQLMRLDNMLL
Sbjct: 54  TDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPTDPQLMRLDNMLL 113

Query: 117 AEGVSGPEKGGGSAAAAAAAAASGGS-SDNSIEHSDYRAKLTQIRQIYHTELEKYEQACN 175
           AEGV+GPEKGGGSAAAAAAAAASGG+ SDNS+EHSDYRAKL+QIRQIYHTELEKYEQACN
Sbjct: 114 AEGVAGPEKGGGSAAAAAAAAASGGAGSDNSVEHSDYRAKLSQIRQIYHTELEKYEQACN 173

Query: 176 EFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDA 235
           EFTTHVMNLLREQSRTRPISPKEIERMV IIHRKFSSIQMQLKQSTCEAVMILRSRFLDA
Sbjct: 174 EFTTHVMNLLREQSRTRPISPKEIERMVSIIHRKFSSIQMQLKQSTCEAVMILRSRFLDA 233

Query: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKK 295
           RRKRRNF+KQATEILNEYFYSHLSNPYPSEEAKEELAKKC ITVSQVSNWFGNKRIRYKK
Sbjct: 234 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKK 293

Query: 296 NIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNS-GSSGSFNLPNSGDMFMNM 354
           NIGKFQEEAN+YAAKTAVTA +  A     +Q NSP+TPNS GSS SFN+ NSGD+FM++
Sbjct: 294 NIGKFQEEANIYAAKTAVTATNVSA---HGSQANSPSTPNSAGSSSSFNMSNSGDLFMSV 350

Query: 355 QSLNGDSYQGSQVGANVQSQVDTLRHVINQTGGYSDGLGGNSLYSPHNLNANGGWQDATT 414
           QSLNGDSYQG+QVGANVQSQVDTLRHVI+QTGGYSDGL  + +YSP  ++ANGGWQDATT
Sbjct: 351 QSLNGDSYQGAQVGANVQSQVDTLRHVISQTGGYSDGLAASQMYSPQGISANGGWQDATT 410

Query: 415 PSSVTSPTEGPGSVHSDTSN 434
           PSSVTSPTEGPGSVHSDTSN
Sbjct: 411 PSSVTSPTEGPGSVHSDTSN 430


>gi|27436887 pre-B-cell leukemia homeobox 2 [Homo sapiens]
          Length = 430

 Score =  631 bits (1627), Expect = 0.0
 Identities = 327/419 (78%), Positives = 351/419 (83%), Gaps = 21/419 (5%)

Query: 23  GGMALPP----PPHGHEGADGDGRKQDIGDILHQIMTITDQSLDEAQAKKHALNCHRMKP 78
           GG   PP    P  G  G  G   KQDIGDIL QIMTITDQSLDEAQAKKHALNCHRMKP
Sbjct: 26  GGPGEPPGGGDPGGGSGGVPGGRGKQDIGDILQQIMTITDQSLDEAQAKKHALNCHRMKP 85

Query: 79  ALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAA 138
           ALFSVLCEIKEKTGLSIR +QEE+P DPQLMRLDNMLLAEGV+GPEKGGGSAAAAAAAAA
Sbjct: 86  ALFSVLCEIKEKTGLSIRSSQEEEPVDPQLMRLDNMLLAEGVAGPEKGGGSAAAAAAAAA 145

Query: 139 SGG--SSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISP 196
           SGG  S DNSIEHSDYR+KL QIR IYH+ELEKYEQACNEFTTHVMNLLREQSRTRP++P
Sbjct: 146 SGGGVSPDNSIEHSDYRSKLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAP 205

Query: 197 KEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYS 256
           KE+ERMV IIHRKFS+IQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATE+LNEYFYS
Sbjct: 206 KEMERMVSIIHRKFSAIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEYFYS 265

Query: 257 HLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAA 316
           HLSNPYPSEEAKEELAKKC ITVSQVSNWFGNKRIRYKKNIGKFQEEAN+YA KTAV+  
Sbjct: 266 HLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAVKTAVSVT 325

Query: 317 HAVAAAVQNNQTNSPTTPNS-GSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQV 375
                   +++T+SPT P+S GS GSFNL  SGDMF+ M  LNGDSY          SQV
Sbjct: 326 QG-----GHSRTSSPTPPSSAGSGGSFNLSGSGDMFLGMPGLNGDSYSA--------SQV 372

Query: 376 DTLRHVINQTGGYSDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTSN 434
           ++LRH +   GGY D LGG  +YSP  + ANG WQ+A TPSSVTSPTEGPGSVHSDTSN
Sbjct: 373 ESLRHSMG-PGGYGDNLGGGQMYSPREMRANGSWQEAVTPSSVTSPTEGPGSVHSDTSN 430


>gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens]
          Length = 374

 Score =  489 bits (1259), Expect = e-138
 Identities = 265/412 (64%), Positives = 297/412 (72%), Gaps = 40/412 (9%)

Query: 25  MALPPPPHGHEGADGDGRKQDIGDILHQIMTITDQSLDEAQAKKHALNCHRMKPALFSVL 84
           MA PP P     A    R+ D  D+L QIM ITDQSLDEAQA+KHALNCHRMKPALFSVL
Sbjct: 1   MAAPPRPAPSPPAP---RRLDTSDVLQQIMAITDQSLDEAQARKHALNCHRMKPALFSVL 57

Query: 85  CEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGG-GSAAAAAAAAASGGS- 142
           CEIKEKT +SIRG Q+EDPPD QL+RLDNMLLAEGV  PEK G G A A A  A  GG  
Sbjct: 58  CEIKEKTVVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGGAVARAGTATPGGCP 117

Query: 143 SDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERM 202
           +DNSIEHSDYRAKL+QIRQIYH+ELEKYEQAC EFTTHV NLL+EQSR RP+SPKEIERM
Sbjct: 118 NDNSIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQSRMRPVSPKEIERM 177

Query: 203 VGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPY 262
           VG IH KFS+IQMQLKQSTCEAVM LRSR LDARRKRRNFSKQATE+LNEYFYSHL+NPY
Sbjct: 178 VGAIHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNPY 237

Query: 263 PSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAA 322
           PSEEAKEELA+K  +T+SQVSNWFGNKRIRYKKN+GKFQEEA +Y  KTAV         
Sbjct: 238 PSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAVDTTEV---G 294

Query: 323 VQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQVDTLRHVI 382
           V  N  +  +TP+SGSSG F LP++GD F+ +++L   S Q    G  +QSQ        
Sbjct: 295 VPGNHASCLSTPSSGSSGPFPLPSAGDAFLTLRTLA--SLQPPPGGGCLQSQ-------- 344

Query: 383 NQTGGYSDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTSN 434
                                 A G WQ AT   +  SP   PGS++S TSN
Sbjct: 345 ----------------------AQGSWQGATPQPATASPAGDPGSINSSTSN 374


>gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens]
          Length = 472

 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 18/175 (10%)

Query: 212 SIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEEL 271
           +IQ+Q  Q   +   +L +    ++ KR    K AT I+  + + HL +PYP+E+ K ++
Sbjct: 265 AIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQI 324

Query: 272 AKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAK--------TAVTAAHAVAAAV 323
           A + ++T+ QV+NWF N R R  + +           AK        T     +++AA V
Sbjct: 325 AAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGV 384

Query: 324 QNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQVDTL 378
              Q  +P T      GS NL        N+QSL+ DS   +   A + +  D+L
Sbjct: 385 LQQQGGAPGT---NPDGSINLD-------NLQSLSSDSATMAMQQAMMAAHDDSL 429


>gi|57863279 Meis1, myeloid ecotropic viral integration site 1
           homolog 3 isoform 2 [Homo sapiens]
          Length = 358

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query: 237 RKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           +KR  F K AT I+  + + HLS+PYPSEE K++LA+   +T+ QV+NWF N R R
Sbjct: 247 KKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 302


>gi|27502383 Meis homeobox 2 isoform h [Homo sapiens]
          Length = 306

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 27/57 (47%), Positives = 40/57 (70%)

Query: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           ++KR  F K AT I+  + + HL++PYPSEE K++LA+   +T+ QV+NWF N R R
Sbjct: 189 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 245


>gi|27502381 Meis homeobox 2 isoform g [Homo sapiens]
          Length = 388

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 27/57 (47%), Positives = 40/57 (70%)

Query: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           ++KR  F K AT I+  + + HL++PYPSEE K++LA+   +T+ QV+NWF N R R
Sbjct: 264 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 320


>gi|24762244 Meis homeobox 2 isoform a [Homo sapiens]
          Length = 401

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 27/57 (47%), Positives = 40/57 (70%)

Query: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           ++KR  F K AT I+  + + HL++PYPSEE K++LA+   +T+ QV+NWF N R R
Sbjct: 277 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 333


>gi|24762250 Meis homeobox 2 isoform d [Homo sapiens]
          Length = 470

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 27/57 (47%), Positives = 40/57 (70%)

Query: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           ++KR  F K AT I+  + + HL++PYPSEE K++LA+   +T+ QV+NWF N R R
Sbjct: 277 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 333


>gi|24762241 Meis homeobox 2 isoform c [Homo sapiens]
          Length = 477

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 27/57 (47%), Positives = 40/57 (70%)

Query: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           ++KR  F K AT I+  + + HL++PYPSEE K++LA+   +T+ QV+NWF N R R
Sbjct: 277 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 333


>gi|24762246 Meis homeobox 2 isoform b [Homo sapiens]
          Length = 394

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 27/57 (47%), Positives = 40/57 (70%)

Query: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           ++KR  F K AT I+  + + HL++PYPSEE K++LA+   +T+ QV+NWF N R R
Sbjct: 277 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 333


>gi|24762225 Meis homeobox 2 isoform f [Homo sapiens]
          Length = 381

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 27/57 (47%), Positives = 40/57 (70%)

Query: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           ++KR  F K AT I+  + + HL++PYPSEE K++LA+   +T+ QV+NWF N R R
Sbjct: 264 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 320


>gi|4505151 Meis homeobox 1 [Homo sapiens]
          Length = 390

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 27/56 (48%), Positives = 39/56 (69%)

Query: 237 RKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           +KR  F K AT I+  + + HL++PYPSEE K++LA+   +T+ QV+NWF N R R
Sbjct: 274 KKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 329


>gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens]
          Length = 436

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 4/89 (4%)

Query: 204 GIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYP 263
           G I  + S +Q+QL Q     + IL      ++ KR    K AT ++  + + H+ +PYP
Sbjct: 232 GTIRIQNSQLQLQLNQD----LSILHQDDGSSKNKRGVLPKHATNVMRSWLFQHIGHPYP 287

Query: 264 SEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           +E+ K+++A + ++T+ QV+NWF N R R
Sbjct: 288 TEDEKKQIAAQTNLTLLQVNNWFINARRR 316


>gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo
           sapiens]
          Length = 241

 Score = 55.8 bits (133), Expect = 7e-08
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 5/109 (4%)

Query: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKK 295
           ++++ N   ++ +IL ++ Y H    YPSEE K+ L++K ++++ Q+SNWF N R R   
Sbjct: 51  KKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLQISNWFINARRRILP 110

Query: 296 NIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNL 344
           ++ + +    +   K   T   A A  +Q+ + + P    SG SG  N+
Sbjct: 111 DMLQQRRNDPIIGHK---TGKDAHATHLQSTEASVPA--KSGPSGPDNV 154


>gi|28178843 TG-interacting factor isoform a [Homo sapiens]
          Length = 401

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 24/57 (42%), Positives = 36/57 (63%)

Query: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           RR+R N  K++ +IL ++ Y H  N YPSE+ K  L+++  ++  QV NWF N R R
Sbjct: 165 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 221


>gi|4507473 TG-interacting factor isoform c [Homo sapiens]
          Length = 272

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 24/57 (42%), Positives = 36/57 (63%)

Query: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           RR+R N  K++ +IL ++ Y H  N YPSE+ K  L+++  ++  QV NWF N R R
Sbjct: 36  RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 92


>gi|28178855 TG-interacting factor isoform d [Homo sapiens]
          Length = 252

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 24/57 (42%), Positives = 36/57 (63%)

Query: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           RR+R N  K++ +IL ++ Y H  N YPSE+ K  L+++  ++  QV NWF N R R
Sbjct: 16  RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 72


>gi|28178853 TG-interacting factor isoform d [Homo sapiens]
          Length = 252

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 24/57 (42%), Positives = 36/57 (63%)

Query: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           RR+R N  K++ +IL ++ Y H  N YPSE+ K  L+++  ++  QV NWF N R R
Sbjct: 16  RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 72


>gi|28178851 TG-interacting factor isoform d [Homo sapiens]
          Length = 252

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 24/57 (42%), Positives = 36/57 (63%)

Query: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           RR+R N  K++ +IL ++ Y H  N YPSE+ K  L+++  ++  QV NWF N R R
Sbjct: 16  RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 72


>gi|28178857 TG-interacting factor isoform d [Homo sapiens]
          Length = 252

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 24/57 (42%), Positives = 36/57 (63%)

Query: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           RR+R N  K++ +IL ++ Y H  N YPSE+ K  L+++  ++  QV NWF N R R
Sbjct: 16  RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 72


>gi|28178849 TG-interacting factor isoform c [Homo sapiens]
          Length = 272

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 24/57 (42%), Positives = 36/57 (63%)

Query: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           RR+R N  K++ +IL ++ Y H  N YPSE+ K  L+++  ++  QV NWF N R R
Sbjct: 36  RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 92


>gi|28178845 TG-interacting factor isoform b [Homo sapiens]
          Length = 286

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 24/57 (42%), Positives = 36/57 (63%)

Query: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           RR+R N  K++ +IL ++ Y H  N YPSE+ K  L+++  ++  QV NWF N R R
Sbjct: 50  RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 106


>gi|219275578 SIX homeobox 2 [Homo sapiens]
          Length = 291

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 6/101 (5%)

Query: 242 FSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQ 301
           F +++  +L E+ Y+H  NPYPS   K ELA+   +T +QVSNWF N+R R +    K +
Sbjct: 131 FKEKSRSVLREW-YAH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKER 187

Query: 302 ---EEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSS 339
              E +N  +      +  +V  + ++ +T S T  +S SS
Sbjct: 188 ENNENSNSNSHNPLNGSGKSVLGSSEDEKTPSGTPDHSSSS 228


>gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens]
          Length = 237

 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 23/57 (40%), Positives = 37/57 (64%)

Query: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           R++R N  K++ +IL ++ Y H  N YPSE+ K  L+ + +++V Q+ NWF N R R
Sbjct: 19  RKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRR 75


>gi|7705555 iroquois homeobox 4 [Homo sapiens]
          Length = 519

 Score = 52.4 bits (124), Expect = 8e-07
 Identities = 24/63 (38%), Positives = 37/63 (58%)

Query: 233 LDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           +D+  +R+N +++ T  L  +   H  NPYP++  K  LA    +T++QVS WF N R R
Sbjct: 140 MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 199

Query: 293 YKK 295
            KK
Sbjct: 200 LKK 202


>gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo
           sapiens]
          Length = 185

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 20/57 (35%), Positives = 38/57 (66%)

Query: 236 RRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           ++++ N   ++ +IL ++ Y H    YPSEE K+ L++K ++++ ++SNWF N R R
Sbjct: 51  KKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLRISNWFINARRR 107


>gi|42544241 iroquois homeobox protein 6 [Homo sapiens]
          Length = 446

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 24/63 (38%), Positives = 35/63 (55%)

Query: 233 LDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIR 292
           L    +R+N +++ T  L  +   H  NPYP++  K  LA    +T++QVS WF N R R
Sbjct: 144 LSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 203

Query: 293 YKK 295
            KK
Sbjct: 204 LKK 206


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.311    0.127    0.361 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,677,038
Number of Sequences: 37866
Number of extensions: 812021
Number of successful extensions: 4584
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 3965
Number of HSP's gapped (non-prelim): 674
length of query: 434
length of database: 18,247,518
effective HSP length: 105
effective length of query: 329
effective length of database: 14,271,588
effective search space: 4695352452
effective search space used: 4695352452
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.