Guide to the Human Genome
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Name: ORC2L Sequence: fasta or formatted (577aa) NCBI GI: 5453830
Description:

origin recognition complex, subunit 2

Referenced in:

Replication Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         23           1
 C cysteine            0.2          1           1
 D aspartate           6.6         38           3
 E glutamate           8.0         46           4
 F phenylalanine       3.8         22           2
 G glycine             4.3         25           3
 H histidine           2.9         17           1
 I isoleucine          4.7         27           2
 K lysine              8.5         49           2
 L leucine            12.5         72           2
 M methionine          1.7         10           1
 N asparagine          5.0         29           2
 P proline             3.3         19           1
 Q glutamine           5.7         33           2
 R arginine            4.5         26           1
 S serine             10.4         60           3
 T threonine           4.7         27           3
 V valine              5.5         32           2
 W tryptophan          0.9          5           1
 Y tyrosine            2.8         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   origin recognition complex, subunit 2 
MYH10                 0.019   myosin, heavy polypeptide 10, non-muscle 
C1orf114              0.014   hypothetical protein LOC57821 
DMP1                  0.013   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.013   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
BIN1                  0.012   bridging integrator 1 isoform 6 
BIN1                  0.012   bridging integrator 1 isoform 5 
BIN1                  0.012   bridging integrator 1 isoform 4 
CYLC1                 0.012   cylicin, basic protein of sperm head cytoskeleton 1...
ANKRD11               0.011   ankyrin repeat domain 11 
SYCP2                 0.011   synaptonemal complex protein 2 
PRPF38B               0.010   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
MYH11                 0.010   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.010   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.010   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.010   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
FAM133B               0.010   hypothetical protein LOC257415 isoform 2 
FAM133B               0.010   hypothetical protein LOC257415 isoform 1 
EIF5B                 0.010   eukaryotic translation initiation factor 5B 
ZNF200                0.009   zinc finger protein 200 isoform 2 
HOOK3                 0.009   golgi-associated microtubule-binding protein HOOK3 [...
PPL                   0.009   periplakin 
RAPGEF6               0.009   PDZ domain-containing guanine nucleotide exchange fa...
SMC2                  0.009   structural maintenance of chromosomes 2 
SMC2                  0.009   structural maintenance of chromosomes 2 
SMC2                  0.009   structural maintenance of chromosomes 2 
GOLGB1                0.009   golgi autoantigen, golgin subfamily b, macrogolgin ...
ARID4B                0.009   AT rich interactive domain 4B isoform 1 
MYH7                  0.008   myosin, heavy chain 7, cardiac muscle, beta 
ANKRD20A3             0.008   ankyrin repeat domain 20 family, member A3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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