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Search of human proteins with 54112394
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|54112394 calcium channel, voltage-dependent, alpha 2/delta
subunit 2 isoform b [Homo sapiens]
(1143 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|54112394 calcium channel, voltage-dependent, alpha 2/delta su... 2343 0.0
gi|54112392 calcium channel, voltage-dependent, alpha 2/delta su... 2337 0.0
gi|54112390 calcium channel, voltage-dependent, alpha 2/delta su... 1172 0.0
gi|132566536 voltage-gated calcium channel alpha(2)delta-4 subun... 435 e-121
gi|54112397 calcium channel, voltage-dependent, alpha 2/delta 3 ... 431 e-120
gi|110578649 cache domain containing 1 [Homo sapiens] 103 1e-21
gi|133925809 inter-alpha (globulin) inhibitor H3 preproprotein [... 57 1e-07
gi|156119625 inter-alpha (globulin) inhibitor H1 [Homo sapiens] 52 2e-06
gi|54607018 RYK receptor-like tyrosine kinase isoform 2 [Homo sa... 46 2e-04
gi|54607020 RYK receptor-like tyrosine kinase isoform 1 [Homo sa... 46 2e-04
gi|31542984 inter-alpha (globulin) inhibitor H4 [Homo sapiens] 45 3e-04
gi|38348336 inter-alpha (globulin) inhibitor H5-like [Homo sapiens] 45 5e-04
gi|4505111 matrilin 1, cartilage matrix protein [Homo sapiens] 42 0.003
gi|48928019 Nedd4 binding protein 1 [Homo sapiens] 40 0.017
gi|70778918 inter-alpha globulin inhibitor H2 polypeptide [Homo ... 40 0.017
gi|11321565 matrilin 3 precursor [Homo sapiens] 39 0.037
gi|118600977 C3 and PZP-like, alpha-2-macroglobulin domain conta... 37 0.082
gi|4501913 ADAM metallopeptidase domain 23 preproprotein [Homo s... 37 0.14
gi|63025220 ring finger protein 215 [Homo sapiens] 37 0.14
gi|122937187 glycosyltransferase 8 domain containing 4 [Homo sap... 36 0.18
gi|213513324 hypothetical protein LOC401115 [Homo sapiens] 35 0.41
gi|239741603 PREDICTED: hypothetical protein XP_002342247 [Homo ... 35 0.53
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens] 35 0.53
gi|110832843 TBP-associated factor 4 [Homo sapiens] 34 0.70
gi|192807309 TNFAIP3 interacting protein 3 [Homo sapiens] 33 1.2
gi|192807305 TNFAIP3 interacting protein 3 [Homo sapiens] 33 1.2
gi|55741845 valyl-tRNA synthetase 2, mitochondrial [Homo sapiens] 33 1.2
gi|52345387 meteorin, glial cell differentiation regulator-like ... 33 1.2
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap... 33 1.5
gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo sapiens] 33 1.5
>gi|54112394 calcium channel, voltage-dependent, alpha 2/delta subunit
2 isoform b [Homo sapiens]
Length = 1143
Score = 2343 bits (6073), Expect = 0.0
Identities = 1143/1143 (100%), Positives = 1143/1143 (100%)
Query: 1 MAVPARTCGASRPGPARTARPWPGCGPHPGPGTRRPTSGPPRPLWLLLPLLPLLAAPGAS 60
MAVPARTCGASRPGPARTARPWPGCGPHPGPGTRRPTSGPPRPLWLLLPLLPLLAAPGAS
Sbjct: 1 MAVPARTCGASRPGPARTARPWPGCGPHPGPGTRRPTSGPPRPLWLLLPLLPLLAAPGAS 60
Query: 61 AYSFPQQHTMQHWARRLEQEVDGVMRIFGGVQQLREIYKDNRNLFEVQENEPQKLVEKVA 120
AYSFPQQHTMQHWARRLEQEVDGVMRIFGGVQQLREIYKDNRNLFEVQENEPQKLVEKVA
Sbjct: 61 AYSFPQQHTMQHWARRLEQEVDGVMRIFGGVQQLREIYKDNRNLFEVQENEPQKLVEKVA 120
Query: 121 GDIESLLDRKVQALKRLADAAENFQKAHRWQDNIKEEDIVYYDAKADAELDDPESEDVER 180
GDIESLLDRKVQALKRLADAAENFQKAHRWQDNIKEEDIVYYDAKADAELDDPESEDVER
Sbjct: 121 GDIESLLDRKVQALKRLADAAENFQKAHRWQDNIKEEDIVYYDAKADAELDDPESEDVER 180
Query: 181 GSKASTLRLDFIEDPNFKNKVNYSYAAVQIPTDIYKGSTVILNELNWTEALENVFMENRR 240
GSKASTLRLDFIEDPNFKNKVNYSYAAVQIPTDIYKGSTVILNELNWTEALENVFMENRR
Sbjct: 181 GSKASTLRLDFIEDPNFKNKVNYSYAAVQIPTDIYKGSTVILNELNWTEALENVFMENRR 240
Query: 241 QDPTLLWQVFGSATGVTRYYPATPWRAPKKIDLYDVRRRPWYIQGASSPKDMVIIVDVSG 300
QDPTLLWQVFGSATGVTRYYPATPWRAPKKIDLYDVRRRPWYIQGASSPKDMVIIVDVSG
Sbjct: 241 QDPTLLWQVFGSATGVTRYYPATPWRAPKKIDLYDVRRRPWYIQGASSPKDMVIIVDVSG 300
Query: 301 SVSGLTLKLMKTSVCEMLDTLSDDDYVNVASFNEKAQPVSCFTHLVQANVRNKKVFKEAV 360
SVSGLTLKLMKTSVCEMLDTLSDDDYVNVASFNEKAQPVSCFTHLVQANVRNKKVFKEAV
Sbjct: 301 SVSGLTLKLMKTSVCEMLDTLSDDDYVNVASFNEKAQPVSCFTHLVQANVRNKKVFKEAV 360
Query: 361 QGMVAKGTTGYKAGFEYAFDQLQNSNITRANCNKMIMMFTDGGEDRVQDVFEKYNWPNRT 420
QGMVAKGTTGYKAGFEYAFDQLQNSNITRANCNKMIMMFTDGGEDRVQDVFEKYNWPNRT
Sbjct: 361 QGMVAKGTTGYKAGFEYAFDQLQNSNITRANCNKMIMMFTDGGEDRVQDVFEKYNWPNRT 420
Query: 421 VRVFTFSVGQHNYDVTPLQWMACANKGYYFEIPSIGAIRINTQEYLDVLGRPMVLAGKEA 480
VRVFTFSVGQHNYDVTPLQWMACANKGYYFEIPSIGAIRINTQEYLDVLGRPMVLAGKEA
Sbjct: 421 VRVFTFSVGQHNYDVTPLQWMACANKGYYFEIPSIGAIRINTQEYLDVLGRPMVLAGKEA 480
Query: 481 KQVQWTNVYEDALGLGLVVTGTLPVFNLTQDGPGEKKNQLILGVMGIDVALNDIKRLTPN 540
KQVQWTNVYEDALGLGLVVTGTLPVFNLTQDGPGEKKNQLILGVMGIDVALNDIKRLTPN
Sbjct: 481 KQVQWTNVYEDALGLGLVVTGTLPVFNLTQDGPGEKKNQLILGVMGIDVALNDIKRLTPN 540
Query: 541 YTLGANGYVFAIDLNGYVLLHPNLKPQTTNFREPVTLDFLDAELEDENKEEIRRSMIDGN 600
YTLGANGYVFAIDLNGYVLLHPNLKPQTTNFREPVTLDFLDAELEDENKEEIRRSMIDGN
Sbjct: 541 YTLGANGYVFAIDLNGYVLLHPNLKPQTTNFREPVTLDFLDAELEDENKEEIRRSMIDGN 600
Query: 601 KGHKQIRTLVKSLDERYIDEVTRNYTWVPIRSTNYSLGLVLPPYSTFYLQANLSDQILQV 660
KGHKQIRTLVKSLDERYIDEVTRNYTWVPIRSTNYSLGLVLPPYSTFYLQANLSDQILQV
Sbjct: 601 KGHKQIRTLVKSLDERYIDEVTRNYTWVPIRSTNYSLGLVLPPYSTFYLQANLSDQILQV 660
Query: 661 KYFEFLLPSSFESEGHVFIAPREYCKDLNASDNNTEFLKNFIELMEKVTPDSKQCNNFLL 720
KYFEFLLPSSFESEGHVFIAPREYCKDLNASDNNTEFLKNFIELMEKVTPDSKQCNNFLL
Sbjct: 661 KYFEFLLPSSFESEGHVFIAPREYCKDLNASDNNTEFLKNFIELMEKVTPDSKQCNNFLL 720
Query: 721 HNLILDTGITQQLVERVWRDQDLNTYSLLAVFAATDGGITRVFPNKAAEDWTENPEPFNA 780
HNLILDTGITQQLVERVWRDQDLNTYSLLAVFAATDGGITRVFPNKAAEDWTENPEPFNA
Sbjct: 721 HNLILDTGITQQLVERVWRDQDLNTYSLLAVFAATDGGITRVFPNKAAEDWTENPEPFNA 780
Query: 781 SFYRRSLDNHGYVFKPPHQDALLRPLELENDTVGILVSTAVELSLGRRTLRPAVVGVKLD 840
SFYRRSLDNHGYVFKPPHQDALLRPLELENDTVGILVSTAVELSLGRRTLRPAVVGVKLD
Sbjct: 781 SFYRRSLDNHGYVFKPPHQDALLRPLELENDTVGILVSTAVELSLGRRTLRPAVVGVKLD 840
Query: 841 LEAWAEKFKVLASNRTHQDQPQKCGPNSHCEMDCEVNNEDLLCVLIDDGGFLVLSNQNHQ 900
LEAWAEKFKVLASNRTHQDQPQKCGPNSHCEMDCEVNNEDLLCVLIDDGGFLVLSNQNHQ
Sbjct: 841 LEAWAEKFKVLASNRTHQDQPQKCGPNSHCEMDCEVNNEDLLCVLIDDGGFLVLSNQNHQ 900
Query: 901 WDQVGRFFSEVDANLMLALYNNSFYTRKESYDYQAACAPQPPGNLGAAPRGVFVPTVADF 960
WDQVGRFFSEVDANLMLALYNNSFYTRKESYDYQAACAPQPPGNLGAAPRGVFVPTVADF
Sbjct: 901 WDQVGRFFSEVDANLMLALYNNSFYTRKESYDYQAACAPQPPGNLGAAPRGVFVPTVADF 960
Query: 961 LNLAWWTSAAAWSLFQQLLYGLIYHSWFQADPAEAEGSPETRESSCVMKQTQYYFGSVNA 1020
LNLAWWTSAAAWSLFQQLLYGLIYHSWFQADPAEAEGSPETRESSCVMKQTQYYFGSVNA
Sbjct: 961 LNLAWWTSAAAWSLFQQLLYGLIYHSWFQADPAEAEGSPETRESSCVMKQTQYYFGSVNA 1020
Query: 1021 SYNAIIDCGNCSRLFHAQRLTNTNLLFVVAEKPLCSQCEAGRLLQKETHSDGPEQCELVQ 1080
SYNAIIDCGNCSRLFHAQRLTNTNLLFVVAEKPLCSQCEAGRLLQKETHSDGPEQCELVQ
Sbjct: 1021 SYNAIIDCGNCSRLFHAQRLTNTNLLFVVAEKPLCSQCEAGRLLQKETHSDGPEQCELVQ 1080
Query: 1081 RPRYRRGPHICFDYNATEDTSDCGRGASFPPSLGVLVSLQLLLLLGLPPRPQPQVLVHAS 1140
RPRYRRGPHICFDYNATEDTSDCGRGASFPPSLGVLVSLQLLLLLGLPPRPQPQVLVHAS
Sbjct: 1081 RPRYRRGPHICFDYNATEDTSDCGRGASFPPSLGVLVSLQLLLLLGLPPRPQPQVLVHAS 1140
Query: 1141 RRL 1143
RRL
Sbjct: 1141 RRL 1143
>gi|54112392 calcium channel, voltage-dependent, alpha 2/delta subunit
2 isoform a [Homo sapiens]
Length = 1145
Score = 2337 bits (6057), Expect = 0.0
Identities = 1142/1145 (99%), Positives = 1143/1145 (99%), Gaps = 2/1145 (0%)
Query: 1 MAVPARTCGASRPGPARTARPWPGCGPHPGPGTRRPTSGPPRPLWLLLPLLPLLAAPGAS 60
MAVPARTCGASRPGPARTARPWPGCGPHPGPGTRRPTSGPPRPLWLLLPLLPLLAAPGAS
Sbjct: 1 MAVPARTCGASRPGPARTARPWPGCGPHPGPGTRRPTSGPPRPLWLLLPLLPLLAAPGAS 60
Query: 61 AYSFPQQHTMQHWARRLEQEVDGVMRIFGGVQQLREIYKDNRNLFEVQENEPQKLVEKVA 120
AYSFPQQHTMQHWARRLEQEVDGVMRIFGGVQQLREIYKDNRNLFEVQENEPQKLVEKVA
Sbjct: 61 AYSFPQQHTMQHWARRLEQEVDGVMRIFGGVQQLREIYKDNRNLFEVQENEPQKLVEKVA 120
Query: 121 GDIESLLDRKVQALKRLADAAENFQKAHRWQDNIKEEDIVYYDAKADAELDDPESEDVER 180
GDIESLLDRKVQALKRLADAAENFQKAHRWQDNIKEEDIVYYDAKADAELDDPESEDVER
Sbjct: 121 GDIESLLDRKVQALKRLADAAENFQKAHRWQDNIKEEDIVYYDAKADAELDDPESEDVER 180
Query: 181 GSKASTLRLDFIEDPNFKNKVNYSYAAVQIPTDIYKGSTVILNELNWTEALENVFMENRR 240
GSKASTLRLDFIEDPNFKNKVNYSYAAVQIPTDIYKGSTVILNELNWTEALENVFMENRR
Sbjct: 181 GSKASTLRLDFIEDPNFKNKVNYSYAAVQIPTDIYKGSTVILNELNWTEALENVFMENRR 240
Query: 241 QDPTLLWQVFGSATGVTRYYPATPWRAPKKIDLYDVRRRPWYIQGASSPKDMVIIVDVSG 300
QDPTLLWQVFGSATGVTRYYPATPWRAPKKIDLYDVRRRPWYIQGASSPKDMVIIVDVSG
Sbjct: 241 QDPTLLWQVFGSATGVTRYYPATPWRAPKKIDLYDVRRRPWYIQGASSPKDMVIIVDVSG 300
Query: 301 SVSGLTLKLMKTSVCEMLDTLSDDDYVNVASFNEKAQPVSCFTHLVQANVRNKKVFKEAV 360
SVSGLTLKLMKTSVCEMLDTLSDDDYVNVASFNEKAQPVSCFTHLVQANVRNKKVFKEAV
Sbjct: 301 SVSGLTLKLMKTSVCEMLDTLSDDDYVNVASFNEKAQPVSCFTHLVQANVRNKKVFKEAV 360
Query: 361 QGMVAKGTTGYKAGFEYAFDQLQNSNITRANCNKMIMMFTDGGEDRVQDVFEKYNWPNRT 420
QGMVAKGTTGYKAGFEYAFDQLQNSNITRANCNKMIMMFTDGGEDRVQDVFEKYNWPNRT
Sbjct: 361 QGMVAKGTTGYKAGFEYAFDQLQNSNITRANCNKMIMMFTDGGEDRVQDVFEKYNWPNRT 420
Query: 421 VRVFTFSVGQHNYDVTPLQWMACANKGYYFEIPSIGAIRINTQEYLDVLGRPMVLAGKEA 480
VRVFTFSVGQHNYDVTPLQWMACANKGYYFEIPSIGAIRINTQEYLDVLGRPMVLAGKEA
Sbjct: 421 VRVFTFSVGQHNYDVTPLQWMACANKGYYFEIPSIGAIRINTQEYLDVLGRPMVLAGKEA 480
Query: 481 KQVQWTNVYEDALGLGLVVTGTLPVFNLTQDGPGEKKNQLILGVMGIDVALNDIKRLTPN 540
KQVQWTNVYEDALGLGLVVTGTLPVFNLTQDGPGEKKNQLILGVMGIDVALNDIKRLTPN
Sbjct: 481 KQVQWTNVYEDALGLGLVVTGTLPVFNLTQDGPGEKKNQLILGVMGIDVALNDIKRLTPN 540
Query: 541 YTLGANGYVFAIDLNGYVLLHPNLKPQTTNFREPVTLDFLDAELEDENKEEIRRSMIDGN 600
YTLGANGYVFAIDLNGYVLLHPNLKPQTTNFREPVTLDFLDAELEDENKEEIRRSMIDGN
Sbjct: 541 YTLGANGYVFAIDLNGYVLLHPNLKPQTTNFREPVTLDFLDAELEDENKEEIRRSMIDGN 600
Query: 601 KGHKQIRTLVKSLDERYIDEVTRNYTWVPIRSTNYSLGLVLPPYSTFYLQANLSDQILQV 660
KGHKQIRTLVKSLDERYIDEVTRNYTWVPIRSTNYSLGLVLPPYSTFYLQANLSDQILQV
Sbjct: 601 KGHKQIRTLVKSLDERYIDEVTRNYTWVPIRSTNYSLGLVLPPYSTFYLQANLSDQILQV 660
Query: 661 KYFEFLLPSSFESEGHVFIAPREYCKDLNASDNNTEFLKNFIELMEKVTPDSKQCNNFLL 720
KYFEFLLPSSFESEGHVFIAPREYCKDLNASDNNTEFLKNFIELMEKVTPDSKQCNNFLL
Sbjct: 661 KYFEFLLPSSFESEGHVFIAPREYCKDLNASDNNTEFLKNFIELMEKVTPDSKQCNNFLL 720
Query: 721 HNLILDTGITQQLVERVWRDQDLNTYSLLAVFAATDGGITRVFPNKAAEDWTENPEPFNA 780
HNLILDTGITQQLVERVWRDQDLNTYSLLAVFAATDGGITRVFPNKAAEDWTENPEPFNA
Sbjct: 721 HNLILDTGITQQLVERVWRDQDLNTYSLLAVFAATDGGITRVFPNKAAEDWTENPEPFNA 780
Query: 781 SFYRRSLDNHGYVFKPPHQDALLRPLELENDTVGILVSTAVELSLGRRTLRPAVVGVKLD 840
SFYRRSLDNHGYVFKPPHQDALLRPLELENDTVGILVSTAVELSLGRRTLRPAVVGVKLD
Sbjct: 781 SFYRRSLDNHGYVFKPPHQDALLRPLELENDTVGILVSTAVELSLGRRTLRPAVVGVKLD 840
Query: 841 LEAWAEKFKVLASNRTHQDQPQKCGPNSHCEMDCEVNNEDLLCVLIDDGGFLVLSNQNHQ 900
LEAWAEKFKVLASNRTHQDQPQKCGPNSHCEMDCEVNNEDLLCVLIDDGGFLVLSNQNHQ
Sbjct: 841 LEAWAEKFKVLASNRTHQDQPQKCGPNSHCEMDCEVNNEDLLCVLIDDGGFLVLSNQNHQ 900
Query: 901 WDQVGRFFSEVDANLMLALYNNSFYTRKESYDYQAACAPQPPGNLGAAPRGVFVPTVADF 960
WDQVGRFFSEVDANLMLALYNNSFYTRKESYDYQAACAPQPPGNLGAAPRGVFVPTVADF
Sbjct: 901 WDQVGRFFSEVDANLMLALYNNSFYTRKESYDYQAACAPQPPGNLGAAPRGVFVPTVADF 960
Query: 961 LNLAWWTSAAAWSLFQQLLYGLIYHSWFQADPAEAEGSPETRESSCVMKQTQYYFGSVNA 1020
LNLAWWTSAAAWSLFQQLLYGLIYHSWFQADPAEAEGSPETRESSCVMKQTQYYFGSVNA
Sbjct: 961 LNLAWWTSAAAWSLFQQLLYGLIYHSWFQADPAEAEGSPETRESSCVMKQTQYYFGSVNA 1020
Query: 1021 SYNAIIDCGNCSRLFHAQRLTNTNLLFVVAEKPLCSQCEAGRLLQKETH--SDGPEQCEL 1078
SYNAIIDCGNCSRLFHAQRLTNTNLLFVVAEKPLCSQCEAGRLLQKETH +DGPEQCEL
Sbjct: 1021 SYNAIIDCGNCSRLFHAQRLTNTNLLFVVAEKPLCSQCEAGRLLQKETHCPADGPEQCEL 1080
Query: 1079 VQRPRYRRGPHICFDYNATEDTSDCGRGASFPPSLGVLVSLQLLLLLGLPPRPQPQVLVH 1138
VQRPRYRRGPHICFDYNATEDTSDCGRGASFPPSLGVLVSLQLLLLLGLPPRPQPQVLVH
Sbjct: 1081 VQRPRYRRGPHICFDYNATEDTSDCGRGASFPPSLGVLVSLQLLLLLGLPPRPQPQVLVH 1140
Query: 1139 ASRRL 1143
ASRRL
Sbjct: 1141 ASRRL 1145
>gi|54112390 calcium channel, voltage-dependent, alpha 2/delta subunit
1 [Homo sapiens]
Length = 1091
Score = 1172 bits (3032), Expect = 0.0
Identities = 595/1095 (54%), Positives = 768/1095 (70%), Gaps = 35/1095 (3%)
Query: 44 LWLLLPLLPLLAAPGASAYSFPQQHTMQHWARRLEQEVDGVMRIFGGVQQLREIYKDNRN 103
L L L L L +S FP T++ W ++++++ + + GV QL +IY+ ++
Sbjct: 7 LALTLTLFQSLLIGPSSEEPFPSAVTIKSWVDKMQEDLVTLAKTASGVNQLVDIYEKYQD 66
Query: 104 LFEVQENEPQKLVEKVAGDIESLLDRKVQALKRLADAAENFQKAHRWQDNIKEEDIVYYD 163
L+ V+ N ++LVE A DIE LL + +AL RLA AE Q AH+W+++ ++VYY+
Sbjct: 67 LYTVEPNNARQLVEIAARDIEKLLSNRSKALVRLALEAEKVQAAHQWREDFASNEVVYYN 126
Query: 164 AKADAELDDPESEDVERGSKASTLRLDFIEDPNFKNKVNYSYAAVQIPTDIYKGSTVILN 223
AK D DPE D E GS+ ++ FIED NF +++Y +AAV IPTDIY+GST++LN
Sbjct: 127 AKDDL---DPEKNDSEPGSQR--IKPVFIEDANFGRQISYQHAAVHIPTDIYEGSTIVLN 181
Query: 224 ELNWTEALENVFMENRRQDPTLLWQVFGSATGVTRYYPATPW----RAPKKIDLYDVRRR 279
ELNWT AL+ VF +NR +DP+LLWQVFGSATG+ RYYPA+PW R P KIDLYDVRRR
Sbjct: 182 ELNWTSALDEVFKKNREEDPSLLWQVFGSATGLARYYPASPWVDNSRTPNKIDLYDVRRR 241
Query: 280 PWYIQGASSPKDMVIIVDVSGSVSGLTLKLMKTSVCEMLDTLSDDDYVNVASFNEKAQPV 339
PWYIQGA+SPKDM+I+VDVSGSVSGLTLKL++TSV EML+TLSDDD+VNVASFN AQ V
Sbjct: 242 PWYIQGAASPKDMLILVDVSGSVSGLTLKLIRTSVSEMLETLSDDDFVNVASFNSNAQDV 301
Query: 340 SCFTHLVQANVRNKKVFKEAVQGMVAKGTTGYKAGFEYAFDQLQNSNITRANCNKMIMMF 399
SCF HLVQANVRNKKV K+AV + AKG T YK GF +AF+QL N N++RANCNK+IM+F
Sbjct: 302 SCFQHLVQANVRNKKVLKDAVNNITAKGITDYKKGFSFAFEQLLNYNVSRANCNKIIMLF 361
Query: 400 TDGGEDRVQDVFEKYNWPNRTVRVFTFSVGQHNYDVTPLQWMACANKGYYFEIPSIGAIR 459
TDGGE+R Q++F KYN ++ VRVFTFSVGQHNYD P+QWMAC NKGYY+EIPSIGAIR
Sbjct: 362 TDGGEERAQEIFNKYN-KDKKVRVFTFSVGQHNYDRGPIQWMACENKGYYYEIPSIGAIR 420
Query: 460 INTQEYLDVLGRPMVLAGKEAKQVQWTNVYEDALGLGLVVTGTLPVFNLTQ--DGPGEKK 517
INTQEYLDVLGRPMVLAG +AKQVQWTNVY DAL LGLV+TGTLPVFN+T + K
Sbjct: 421 INTQEYLDVLGRPMVLAGDKAKQVQWTNVYLDALELGLVITGTLPVFNITGQFENKTNLK 480
Query: 518 NQLILGVMGIDVALNDIKRLTPNYTLGANGYVFAIDLNGYVLLHPNLKPQTTNFREPVTL 577
NQLILGVMG+DV+L DIKRLTP +TL NGY FAID NGYVLLHPNL+P+ +EPVTL
Sbjct: 481 NQLILGVMGVDVSLEDIKRLTPRFTLCPNGYYFAIDPNGYVLLHPNLQPKNPKSQEPVTL 540
Query: 578 DFLDAELEDENKEEIRRSMIDGNKGHKQIRTLVKSLDERYIDEVTRNYTWVPIRSTNYSL 637
DFLDAELE++ K EIR MIDG G K RTLVKS DERYID+ R YTW P+ T+YSL
Sbjct: 541 DFLDAELENDIKVEIRNKMIDGESGEKTFRTLVKSQDERYIDKGNRTYTWTPVNGTDYSL 600
Query: 638 GLVLPPYSTFYLQANLSDQILQ-------VKYFEFLLPSSFESEGHVFIAPREYCKDLNA 690
LVLP YS +Y++A L + I Q +K E L P +FE G+ FIAPR+YC DL
Sbjct: 601 ALVLPTYSFYYIKAKLEETITQARSKKGKMKDSETLKPDNFEESGYTFIAPRDYCNDLKI 660
Query: 691 SDNNTEFLKNFIELMEKVTPDSKQCNNFLLHNLILDTGITQQLVERVWRDQDLNTYSLLA 750
SDNNTEFL NF E +++ TP++ CN L++ ++LD G T +LV+ W Q N + A
Sbjct: 661 SDNNTEFLLNFNEFIDRKTPNNPSCNADLINRVLLDAGFTNELVQNYWSKQK-NIKGVKA 719
Query: 751 VFAATDGGITRVFPNKAAEDWTENPEPFNASFYRRSLDNHGYVFKPPHQDALLRPLELEN 810
F TDGGITRV+P +A E+W ENPE + SFY+RSLDN YVF P+ + P E+
Sbjct: 720 RFVVTDGGITRVYPKEAGENWQENPETYEDSFYKRSLDNDNYVFTAPYFNK-SGPGAYES 778
Query: 811 DTVGILVSTAVELSLGRRTLRPAVVGVKLDLEAWAEKFKVLASNRTHQDQPQKCGPNSHC 870
GI+VS AVE+ + + L+PAVVG+K+D+ +W E F +T P GP
Sbjct: 779 ---GIMVSKAVEIYIQGKLLKPAVVGIKIDVNSWIENF-----TKTSIRDP-CAGP---- 825
Query: 871 EMDCEVNNEDLLCVLIDDGGFLVLSNQNHQWDQVGRFFSEVDANLMLALYNNSFYTRKES 930
DC+ N++ + CV++DDGGFL+++N + +Q+GRFF E+D +LM L N S Y +S
Sbjct: 826 VCDCKRNSDVMDCVILDDGGFLLMANHDDYTNQIGRFFGEIDPSLMRHLVNISVYAFNKS 885
Query: 931 YDYQAACAPQPPGNLGAAPRGVFVPTVADFLNLAWWTSAAAWSLFQQLLYGLIYHSWFQA 990
YDYQ+ C P GA R +VP+VAD L + WW +AAAWS+ QQ L L + +A
Sbjct: 886 YDYQSVCEPGAAPKQGAGHRSAYVPSVADILQIGWWATAAAWSILQQFLLSLTFPRLLEA 945
Query: 991 DPAEAEG-SPETRESSCVMKQTQYYFGSVNASYNAIIDCGNCSRLFHAQRLTNTNLLFVV 1049
E + + + SC+ +QTQY+F + + S++ ++DCGNCSR+FH ++L NTNL+F++
Sbjct: 946 VEMEDDDFTASLSKQSCITEQTQYFFDNDSKSFSGVLDCGNCSRIFHGEKLMNTNLIFIM 1005
Query: 1050 AEKPLCSQCEAGRLLQKETHSDGPEQCELVQRPRYRRGPHICFDYNATEDTSDCGRGASF 1109
E C+ L+Q E SDGP C++V++PRYR+GP +CFD N ED +DCG +
Sbjct: 1006 VESKGTCPCDTRLLIQAEQTSDGPNPCDMVKQPRYRKGPDVCFDNNVLEDYTDCGGVSGL 1065
Query: 1110 PPSLGVLVSLQLLLL 1124
PSL ++ +Q LLL
Sbjct: 1066 NPSLWYIIGIQFLLL 1080
>gi|132566536 voltage-gated calcium channel alpha(2)delta-4 subunit
[Homo sapiens]
Length = 1137
Score = 435 bits (1119), Expect = e-121
Identities = 337/1123 (30%), Positives = 552/1123 (49%), Gaps = 121/1123 (10%)
Query: 44 LWLLLPLLPLLAAPGASAYSFPQQHTMQHWARRLEQEVDGVMRIFGGVQQLREIYKDNRN 103
LWLLL L +P P + T++ WA ++ + + G L++ YKD +
Sbjct: 54 LWLLL--LGTSLSPAWGQAKIPLE-TVKLWADTFGGDLYNTVTKYSGSLLLQKKYKDVES 110
Query: 104 LFEVQENEPQKLVEKVAGDIESLLDRKVQALKRLADAAENFQKAHRWQDNIKEEDIVYYD 163
+++E + +LV K + D+E++L RKV+A++ L +AAE H + +++ + YY+
Sbjct: 111 SLKIEEVDGLELVRKFSEDMENMLRRKVEAVQNLVEAAEEADLNHEFNESLVFD---YYN 167
Query: 164 AKADAELDDPESEDVERGSKASTLRLDFIEDPN--FKN-KVNYSYAAVQIPTDIYKGSTV 220
+ E D+ + VE G+ +F+ + N F N VN S ++VQ+PT++Y
Sbjct: 168 SVLINERDE-KGNFVELGA-------EFLLESNAHFSNLPVNTSISSVQLPTNVYNKDPD 219
Query: 221 ILNELNWTEALENVFMENRRQDPTLLWQVFGSATGVTRYYPATPWRAPKK-IDLYDVRRR 279
ILN + +EAL VF+EN ++DPTL WQ FGSATG R YP W + + +D R R
Sbjct: 220 ILNGVYMSEALNAVFVENFQRDPTLTWQYFGSATGFFRIYPGIKWTPDENGVITFDCRNR 279
Query: 280 PWYIQGASSPKDMVIIVDVSGSVSGLTLKLMKTSVCEMLDTLSDDDYVNVASFNEKAQPV 339
WYIQ A+SPKD+VI+VDVSGS+ GL + + K ++ +LDTL ++D++N+ ++N+ +
Sbjct: 280 GWYIQAATSPKDIVILVDVSGSMKGLRMTIAKHTITTILDTLGENDFINIIAYNDYVHYI 339
Query: 340 S-CFTH-LVQANVRNKKVFKEAVQGMVAKGTTGYKAGFEYAFDQLQNSNITRAN--CNKM 395
CF LVQA+ N++ FK V+ ++ KG AF L+ + CN+
Sbjct: 340 EPCFKGILVQADRDNREHFKLLVEELMVKGVGVVDQALREAFQILKQFQEAKQGSLCNQA 399
Query: 396 IMMFTDGGEDRVQDVFEKYNWPNRTVRVFTFSVGQHNYDVTPLQWMACANKGYYFEIPSI 455
IM+ +DG + + VFEKYNWP+ VRVFT+ +G+ ++W+AC NKGYY +I ++
Sbjct: 400 IMLISDGAVEDYEPVFEKYNWPDCKVRVFTYLIGREVSFADRMKWIACNNKGYYTQISTL 459
Query: 456 GAIRINTQEYLDVLGRPMVLAGKEAKQVQWTNVYED-------ALGLGLVVTGTLPVFNL 508
+ N EYL VL RPMV+ + WT Y D A L L+ T +PVF+
Sbjct: 460 ADTQENVMEYLHVLSRPMVI--NHDHDIIWTEAYMDSKLLSSQAQSLTLLTTVAMPVFSK 517
Query: 509 TQDGPGEKKNQLILGVMGIDVALNDIKRLTPNYTLGANGYVFAIDLNGYVLLHPNLKPQT 568
+ + + ++LGV+G DVAL ++ +L P Y LG +GY F NGY+L HP+L+P
Sbjct: 518 KNE---TRSHGILLGVVGSDVALRELMKLAPRYKLGVHGYAFLNTNNGYILSHPDLRPL- 573
Query: 569 TNFREPVTL---------DFLDAELEDENKEEIRRSMIDGNKGHKQIRTLVKSLDERYID 619
+RE L D + E ED+ E +R +MI+ G + V + +
Sbjct: 574 --YREGKKLKPKPNYNSVDLSEVEWEDQ-AESLRTAMINRETGTLSMDVKVPMDKGKRVL 630
Query: 620 EVTRNYTWVPIRSTNYSLGLVLP-PYSTFYLQANLSDQILQVKYFEFLLPSSFESEGHVF 678
+T +Y + I T +SLG+VL + + L N S ++ + L P + +
Sbjct: 631 FLTNDYFFTDISDTPFSLGVVLSRGHGEYILLGNTS---VEEGLHDLLHPDLALAGDWI- 686
Query: 679 IAPREYC-KDLNASDNNTEFLKNFIELMEKVTPDSKQCNNFLLHNLILDTGITQQLVERV 737
YC D++ L+ I + + PD +C+ L+ ++ D +T + E
Sbjct: 687 -----YCITDIDPDHRKLSQLEAMIRFLTRKDPD-LECDEELVREVLFDAVVTAPM-EAY 739
Query: 738 WRDQDLN-----TYSLLAVFAATDGGITR----VFPNKAAEDWTENPEPFNASF------ 782
W LN + + F T G+ R V K ++ PE + F
Sbjct: 740 WTALALNMSEESEHVVDMAFLGTRAGLLRSSLFVGSEKVSDRKFLTPEDEASVFTLDRFP 799
Query: 783 --YRRSLDN--HGYVFKPPHQDALLRPLELENDTVGILVSTAVELSLGRRTLRPAVVGVK 838
YR++ ++ +VF + E + + + STAV +++ +RT A GV+
Sbjct: 800 LWYRQASEHPAGSFVFNLRWAEG----PESAGEPMVVTASTAVAVTVDKRTAIAAAAGVQ 855
Query: 839 LDLEAWAEKFKVLASNRTHQDQPQKCGPNSHCEMDCEVNNEDLLCVLIDDGGFLVLSNQN 898
+ LE KF + D P C CE + DL C +ID+ GF+++S ++
Sbjct: 856 MKLEFLQRKFWAATRQCSTVDGP--------CTQSCE--DSDLDCFVIDNNGFILISKRS 905
Query: 899 HQWDQVGRFFSEVDANLMLALYNNSFYTRKESYDYQAACAPQPPGNLGAAPRGVFVPTVA 958
+ GRF EVD ++ L + +++ YDYQA C P + A P V ++
Sbjct: 906 R---ETGRFLGEVDGAVLTQLLSMGVFSQVTMYDYQAMCKPSSHHHSAAQP---LVSPIS 959
Query: 959 DFLNLAWWTSAAAWSLFQQLLYGL---IYHSWFQADPAEAEG--------SPETRESSCV 1007
FL +A W L + +L+ L ++ SW+ AEA+ + C
Sbjct: 960 AFL------TATRWLLQELVLFLLEWSVWGSWYDRG-AEAKSVFHHSHKHKKQDPLQPCD 1012
Query: 1008 MKQTQYYFGSVNASYNAIIDCGNCSRLFHAQRLTNTNLLFVVAEKPLCSQCEAGRLLQK- 1066
+ + + N I++CG C ++F Q++ N+NLL +V + P C +LQ+
Sbjct: 1013 TEYPVFVYQPAIREANGIVECGPCQKVFVVQQIPNSNLLLLVTD-PTCDCSIFPPVLQEA 1071
Query: 1067 -ETHSDGPEQCELVQRPRYRRGPHICFDYNATEDTSDCGRGAS 1108
E + +C+ ++ + RR P C ++ E+ DCG GAS
Sbjct: 1072 TEVKYNASVKCDRMRSQKLRRRPDSCHAFHPEENAQDCG-GAS 1113
>gi|54112397 calcium channel, voltage-dependent, alpha 2/delta 3
subunit [Homo sapiens]
Length = 1091
Score = 431 bits (1108), Expect = e-120
Identities = 339/1148 (29%), Positives = 560/1148 (48%), Gaps = 114/1148 (9%)
Query: 30 GPGTRRPTSGPPRPLWLLLPLLPLLAAPGASAYSFPQ--QHTMQHWARRLEQEVDGVMRI 87
GPG+ R S R LL L AA G S Q ++ WA E+ +
Sbjct: 3 GPGSPRRAS---RGASALLAAALLYAALGDVVRSEQQIPLSVVKLWASAFGGEIKSIAAK 59
Query: 88 FGGVQQLREIYKDNRNLFEVQENEPQKLVEKVAGDIESLLDRKVQALKRLADAAENFQKA 147
+ G Q L++ YK+ ++E + +LV+K+A ++E + +K +A++RL +AAE
Sbjct: 60 YSGSQLLQKKYKEYEKDVAIEEIDGLQLVKKLAKNMEEMFHKKSEAVRRLVEAAEEAHLK 119
Query: 148 HRWQDNIKEEDIVYYDAKADAELDDPESEDVERGSKASTLRLDFIEDPN--FKN-KVNYS 204
H + +++ E Y++A E D + +E G +FI PN F N VN S
Sbjct: 120 HEFDADLQYE---YFNAVLINERDK-DGNFLELGK-------EFILAPNDHFNNLPVNIS 168
Query: 205 YAAVQIPTDIYKGSTVILNELNWTEALENVFMENRRQDPTLLWQVFGSATGVTRYYPATP 264
+ VQ+PT++Y I+N + W+E+L VF++N +DP+L+WQ FGSA G R YP
Sbjct: 169 LSDVQVPTNMYNKDPAIVNGVYWSESLNKVFVDNFDRDPSLIWQYFGSAKGFFRQYPGIK 228
Query: 265 WRAPKK-IDLYDVRRRPWYIQGASSPKDMVIIVDVSGSVSGLTLKLMKTSVCEMLDTLSD 323
W + + +D R R WYIQ A+SPKD+VI+VDVSGS+ GL L + K +V +LDTL D
Sbjct: 229 WEPDENGVIAFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIAKQTVSSILDTLGD 288
Query: 324 DDYVNVASFNEKAQPVS-CFTH-LVQANVRNKKVFKEAVQGMVAKGTTGYKAGFEYAFDQ 381
DD+ N+ ++NE+ V C LVQA+ NK+ F+E + + AKG AF+
Sbjct: 289 DDFFNIIAYNEELHYVEPCLNGTLVQADRTNKEHFREHLDKLFAKGIGMLDIALNEAFNI 348
Query: 382 LQNSNITRAN--CNKMIMMFTDGGEDRVQDVFEKYNWPNRTVRVFTFSVGQHNYDVTPLQ 439
L + N T C++ IM+ TDG D +F KYNWP+R VR+FT+ +G+ L+
Sbjct: 349 LSDFNHTGQGSICSQAIMLITDGAVDTYDTIFAKYNWPDRKVRIFTYLIGREAAFADNLK 408
Query: 440 WMACANKGYYFEIPSIGAIRINTQEYLDVLGRPMVLAGKEAKQVQWTNVYEDAL------ 493
WMACANKG++ +I ++ ++ N EYL VL RP V+ + V WT Y D+
Sbjct: 409 WMACANKGFFTQISTLADVQENVMEYLHVLSRPKVI--DQEHDVVWTEAYIDSTLPQAQK 466
Query: 494 -----GLGLVVTGTLPVFNLTQDGPGEKKNQLILGVMGIDVALNDIKRLTPNYTLGANGY 548
G L+ T +PVF+ + + ++LGV+G DV + ++ + P Y LG +GY
Sbjct: 467 LTDDQGPVLMTTVAMPVFSKQNE---TRSKGILLGVVGTDVPVKELLKTIPKYKLGIHGY 523
Query: 549 VFAIDLNGYVLLHPNLK---PQTTNFREPVTLDFLDAELEDENKEEIRRSMIDGNKGHKQ 605
FAI NGY+L HP L+ + R+P +E+E E+++++ R+ + K K
Sbjct: 524 AFAITNNGYILTHPELRLLYEEGKKRRKPNYSSVDLSEVEWEDRDDVLRNAMVNRKTGKF 583
Query: 606 IRTLVKSLDE-RYIDEVTRNYTWVPIRSTNYSLGLVLP-PYSTFYLQAN--LSDQILQVK 661
+ K++D+ + + +T +Y + I+ T +SLG+ L + ++ + N + + + ++
Sbjct: 584 SMEVKKTVDKGKRVLVMTNDYYYTDIKGTPFSLGVALSRGHGKYFFRGNVTIEEGLHDLE 643
Query: 662 YFEFLLPSSFESEGHVFIAPREYCK-DLNASDNNTEFLKNFIELMEKVTPDSKQCNNFLL 720
+ + L + YC DL+ + L+ I+L K QC+ L+
Sbjct: 644 HPDVSLADEW-----------SYCNTDLHPEHRHLSQLE-AIKLYLKGKEPLLQCDKELI 691
Query: 721 HNLILDTGITQQLVERVWRDQDLN-----TYSLLAVFAATDGGITRVFPNKAAEDWT--- 772
++ D + +E W LN + F T G++R+ AE T
Sbjct: 692 QEVLFD-AVVSAPIEAYWTSLALNKSENSDKGVEVAFLGTRTGLSRINLFVGAEQLTNQD 750
Query: 773 -----ENPEPFNAS----FYRRSLDN--HGYVFKPPHQDALLRPLELENDTVGILVSTAV 821
+ FNA +YRR+ + +V+ P + N + + ST++
Sbjct: 751 FLKAGDKENIFNADHFPLWYRRAAEQIPGSFVYSIPFSTGPV------NKSNVVTASTSI 804
Query: 822 ELSLGRRTLRPAVVGVKLDLEAWAEKFKVLASNRTHQDQPQKCGPNSHCEMDCEVNNEDL 881
+L R++ A VG+++ LE + KF + Q + C + C+ +E +
Sbjct: 805 QLLDERKSPVVAAVGIQMKLEFFQRKFWTASR--------QCASLDGKCSISCD--DETV 854
Query: 882 LCVLIDDGGFLVLSNQNHQWDQVGRFFSEVDANLMLALYNNSFYTRKESYDYQAACAPQP 941
C LID+ GF+++S + Q G FF E++ +M L + R YDYQA C
Sbjct: 855 NCYLIDNNGFILVS---EDYTQTGDFFGEIEGAVMNKLLTMGSFKRITLYDYQAMCRANK 911
Query: 942 PGNLGAAPRGVFVPTVADFLNLAWWTSAAAWSLFQQLLYGLIYH--SWFQAD-PAEAEGS 998
+ GA G+ P A + SA W + + +L+ + ++ SW+ +D A+A+
Sbjct: 912 ESSDGA--HGLLDPYNA-------FLSAVKWIMTELVLFLVEFNLCSWWHSDMTAKAQKL 962
Query: 999 PETRESSCVMKQTQYYFGSVNASYNAIIDCGNCSRLFHAQRLTNTNLLFVVAEKP-LCSQ 1057
+T E C + + I C +CS+ F Q++ ++NL VV + LC
Sbjct: 963 KQTLE-PCDTEYPAFVSERTIKETTGNIACEDCSKSFVIQQIPSSNLFMVVVDSSCLCES 1021
Query: 1058 CEAGRLLQKETHSDGPEQCELVQRPRYRRGPHICFDYNATEDTSDCGRGASFPPSLGVLV 1117
+ E + +CE ++ + RR P C ++ E+ +CG GA + VL+
Sbjct: 1022 VAPITMAPIEIRYNESLKCERLKAQKIRRRPESCHGFHPEENARECG-GAPSLQAQTVLL 1080
Query: 1118 SLQLLLLL 1125
L LLL+L
Sbjct: 1081 LLPLLLML 1088
>gi|110578649 cache domain containing 1 [Homo sapiens]
Length = 1223
Score = 103 bits (256), Expect = 1e-21
Identities = 147/665 (22%), Positives = 276/665 (41%), Gaps = 98/665 (14%)
Query: 194 DPNFKNKVNYSYAAVQIPTDIYKGSTVILNELNWTEALENVFMENRRQDPTLLWQVFGSA 253
D NF V+ + + ++ T TV N L +V +N + +P + WQ F S
Sbjct: 88 DGNFNTNVSRTISCDRLST------TVNSRAFNPGRDLNSVLADNLKSNPGIKWQYFSSE 141
Query: 254 TGVTRYYPATPWRAPKKIDLYDVRRRPWYIQGAS-SPKDMVIIVDVSGSVSGLTLKLMKT 312
G+ +PA +R Y+ R RP Y+ K +V+I+D SV+ L++ K
Sbjct: 142 EGIFTVFPAHKFRCKGS---YEHRSRPIYVSTVRPQSKHIVVILDHGASVTDTQLQIAKD 198
Query: 313 SVCEMLDTLSDDDYVNVASFNEKAQPVS---CF-THLVQANVRNKKVFKEAVQGMVAKGT 368
+ +L + + D ++V + + + S C+ T L A K+ V + + +
Sbjct: 199 AAQVILSAIDEHDKISVLTVADTVRTCSLDQCYKTFLSPATSETKRKMSTFVSSVKSSDS 258
Query: 369 -TGYKAGFEYAFDQLQNSNIT---RANCNKMIMMFTDG-------GEDR---VQDVFEKY 414
T + GF+ AF ++++N +AN + +I+ + G ED+ +Q + E+
Sbjct: 259 PTQHAVGFQKAFQLIRSTNNNTKFQANTDMVIIYLSAGITSKDSSEEDKKATLQVINEEN 318
Query: 415 NWPNRTVRVFTFSVGQHNYDVTPLQWMACA------NKGYY-----FEIPSI-GAIRINT 462
++ N +V + T+++ N VT L+ +A N G Y +P I G++ +
Sbjct: 319 SFLNNSVMILTYAL--MNDGVTGLKELAFLRDLAEQNSGKYGVPDRMALPVIKGSMMVLN 376
Query: 463 Q--EYLDVLGRPMV-LAGKEAKQVQWTNVYEDALGLGLVVTGTLPVFNLTQDGPGEKKNQ 519
Q +GR L + + ++ + D +G GL++T + P +
Sbjct: 377 QLSNLETTVGRFYTNLPNRMIDEAVFSLPFSDEMGDGLIMTVSKPCYF----------GN 426
Query: 520 LILGVMGIDVALNDIKRLTPNYTLGANGYVFAIDLNGYVLLHPNLKPQTTNFREPVTLDF 579
L+LG++G+DV L I Y Y F ID GY L+HP+L P+ D
Sbjct: 427 LLLGIVGVDVNLAYILEDVTYYQDSLASYTFLIDDKGYTLMHPSLTRPYLLSEPPLHTDI 486
Query: 580 LDAELEDENKEEIRRSMIDGNKGHKQIRTLVKSLDERYIDEVTR--------NYTWVPIR 631
+ E E +R++++ G + I V S +I+++ +Y W ++
Sbjct: 487 IHYE-NIPKFELVRQNILSLPLGSQIIAVPVNSSLSWHINKLRETGKEAYNVSYAWKMVQ 545
Query: 632 STNYSLGLV----------------LPPYSTFYLQANLSDQILQVKYFEFLL----PSSF 671
T++ L +V +P Y + +L Q +F+ L P+
Sbjct: 546 DTSFILCIVVIQPEIPVKQLKNLNTVPSSKLLYHRLDLLGQPSACLHFKQLATLESPTIM 605
Query: 672 ESEGHVFIAPREYCKDLNAS---DNNTEFLKNFIELMEKVTPDSKQCNNFLLHNLILDTG 728
S G F +P E+ ++ T +L + L+ N + + + D
Sbjct: 606 LSAGS-FSSPYEHLSQPETKRMVEHYTAYLSDNTRLIANPGLKFSVRNEVMATSHVTDEW 664
Query: 729 ITQQLVERVWRDQDLNTYSLLAVFAATDGGITRVFPNKAAEDWTENPEPFNASFYRRSLD 788
+TQ + LNTY ++ + AT G+ R++P + + +P +Y ++
Sbjct: 665 MTQMEM------SSLNTY-IVRRYIATPNGVLRIYPGSLMD---KAFDPTRRQWYLHAVA 714
Query: 789 NHGYV 793
N G +
Sbjct: 715 NPGLI 719
>gi|133925809 inter-alpha (globulin) inhibitor H3 preproprotein
[Homo sapiens]
Length = 890
Score = 57.0 bits (136), Expect = 1e-07
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 11/194 (5%)
Query: 289 PKDMVIIVDVSGSVSGLTLKLMKTSVCEMLDTLSDDDYVNVASFNEKAQPVSCFTHLVQA 348
PK++ ++D+SGS++G L+ K ++ +L+ + ++DY+N F+ + HLVQA
Sbjct: 282 PKNVAFVIDISGSMAGRKLEQTKEALLRILEDMQEEDYLNFILFSGDVS--TWKEHLVQA 339
Query: 349 NVRNKKVFKEAVQGMVAKGTTGYKAGFEYAFDQLQNSNITR---ANCNKMIMMFTDG--- 402
N + + V+ M KG T G L + +++M TDG
Sbjct: 340 TPENLQEARTFVKSMEDKGMTNINDGLLRGISMLNKAREEHRIPERSTSIVIMLTDGDAN 399
Query: 403 -GEDRVQDVFEKY-NWPNRTVRVFTFSVGQHNYDVTPLQWMACANKGYYFEIPSIGAIRI 460
GE R + + E N ++ G +N + L+ MA N G+ I +
Sbjct: 400 VGESRPEKIQENVRNAIGGKFPLYNLGFG-NNLNYNFLENMALENHGFARRIYEDSDADL 458
Query: 461 NTQEYLDVLGRPMV 474
Q + + + P++
Sbjct: 459 QLQGFYEEVANPLL 472
>gi|156119625 inter-alpha (globulin) inhibitor H1 [Homo sapiens]
Length = 911
Score = 52.4 bits (124), Expect = 2e-06
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 290 KDMVIIVDVSGSVSGLTLKLMKTSVCEMLDTLSDDDYVNVASFNEKAQPVSCFTHLVQAN 349
K++V ++D+SGS+ G +K K ++ ++L + DY ++ F + Q S LVQA+
Sbjct: 291 KNVVFVIDISGSMRGQKVKQTKEALLKILGDMQPGDYFDLVLFGTRVQ--SWKGSLVQAS 348
Query: 350 VRNKKVFKEAVQGMVAKGTTGYKAGFEYAFD---QLQNSNITRANCNKMIMMFTDGG--- 403
N + ++ V+G T G + Q+Q S +N +++M TDG
Sbjct: 349 EANLQAAQDFVRGFSLDEATNLNGGLLRGIEILNQVQESLPELSNHASILIMLTDGDPTE 408
Query: 404 --EDRVQDVFEKYNWPNRTVRVFTFSVGQHNYDVTPLQWMACANKG 447
DR Q + N ++ G HN D L+ M+ N G
Sbjct: 409 GVTDRSQILKNVRNAIRGRFPLYNLGFG-HNVDFNFLEVMSMENNG 453
>gi|54607018 RYK receptor-like tyrosine kinase isoform 2 [Homo
sapiens]
Length = 607
Score = 46.2 bits (108), Expect = 2e-04
Identities = 28/58 (48%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 14 GPARTARPWPGCGPHPGPGTRRPTSGPPRPLWLLLPLLPLLAAPGASAYSFPQQHTMQ 71
G AR RP C P G R + PP PL LLL LLPLL APGA+A P+ +Q
Sbjct: 3 GAARLGRPGRSCLP----GARGLRAPPPPPLLLLLALLPLLPAPGAAAAPAPRPPELQ 56
>gi|54607020 RYK receptor-like tyrosine kinase isoform 1 [Homo
sapiens]
Length = 610
Score = 46.2 bits (108), Expect = 2e-04
Identities = 28/58 (48%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 14 GPARTARPWPGCGPHPGPGTRRPTSGPPRPLWLLLPLLPLLAAPGASAYSFPQQHTMQ 71
G AR RP C P G R + PP PL LLL LLPLL APGA+A P+ +Q
Sbjct: 3 GAARLGRPGRSCLP----GARGLRAPPPPPLLLLLALLPLLPAPGAAAAPAPRPPELQ 56
>gi|31542984 inter-alpha (globulin) inhibitor H4 [Homo sapiens]
Length = 930
Score = 45.4 bits (106), Expect = 3e-04
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 289 PKDMVIIVDVSGSVSGLTLKLMKTSVCEMLDTLSDDDYVNVASFNEKAQPVSCFTHLVQA 348
PK++V ++D SGS+SG ++ + ++ ++LD LS D N+ F+ +A LV A
Sbjct: 272 PKNVVFVIDKSGSMSGRKIQQTREALIKILDDLSPRDQFNLIVFSTEA--TQWRPSLVPA 329
Query: 349 NVRNKKVFKEAVQGMVAKGTTGYKAGFEYAFDQLQNSNITR---ANCNKMIMMFTDG 402
+ N + G+ A G T A L +SN +I++ TDG
Sbjct: 330 SAENVNKARSFAAGIQALGGTNINDAMLMAVQLLDSSNQEERLPEGSVSLIILLTDG 386
>gi|38348336 inter-alpha (globulin) inhibitor H5-like [Homo sapiens]
Length = 1313
Score = 44.7 bits (104), Expect = 5e-04
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 290 KDMVIIVDVSGSVSGLTLKLMKTSVCEMLDTLSDDDYVNVASFNEKAQPVSCFTHLVQAN 349
K++V ++DVS S+ G ++ KT++ +L L +DY N+ SF++ V +QA
Sbjct: 282 KNVVFVIDVSSSMFGTKMEQTKTAMNVILSDLQANDYFNIISFSDTVN-VWKAGGSIQAT 340
Query: 350 VRNKKVFKEAVQGMVAKGTTGYKAGFEYAFDQLQNSN 386
++N K+ + M A G T + A L +SN
Sbjct: 341 IQNVHSAKDYLHCMEADGWTDVNSALLAAASVLNHSN 377
>gi|4505111 matrilin 1, cartilage matrix protein [Homo sapiens]
Length = 496
Score = 42.4 bits (98), Expect = 0.003
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 285 GASSPKDMVIIVDVSGSVSGLTLKLMKTSVCEMLDTLSDDDYVNVASFNEKAQPVSCFTH 344
G SS D+V ++D S SV +L+K + +++DTL D + + + V
Sbjct: 269 GGSSATDLVFLIDGSKSVRPENFELVKKFISQIVDTLDVSDKLAQVGLVQYSSSVR--QE 326
Query: 345 LVQANVRNKKVFKEAVQGM--VAKGT-TGYKAGFEYAFD-QLQNSNITRANCNKMIMMFT 400
KK K AV+ M + KGT TG A +Y D S+ R K+ ++FT
Sbjct: 327 FPLGRFHTKKDIKAAVRNMSYMEKGTMTG--AALKYLIDNSFTVSSGARPGAQKVGIVFT 384
Query: 401 DG-GEDRVQDVFEK 413
DG +D + D +K
Sbjct: 385 DGRSQDYINDAAKK 398
Score = 33.1 bits (74), Expect = 1.5
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 14/161 (8%)
Query: 289 PKDMVIIVDVSGSVSGLTLKLMKTSVCEMLDTLS-DDDYVNVASFNEKAQPVSCFTHLVQ 347
P D+V +VD S SV + + +K + +++++L + V N + F+ ++
Sbjct: 39 PTDLVFVVDSSRSVRPVEFEKVKVFLSQVIESLDVGPNATRVGMVNYASTVKQEFS--LR 96
Query: 348 ANVRNKKVFKEAVQGM--VAKGT-TGYKAGFEY--AFDQLQNSNITRANCNKMIMMFTDG 402
A+V +K +AV+ + ++ GT TG F AF + + +K++++ TDG
Sbjct: 97 AHV-SKAALLQAVRRIQPLSTGTMTGLAIQFAITKAFGDAEGGRSRSPDISKVVIVVTDG 155
Query: 403 -GEDRVQDVFEKYNWPNRTVRVFTFSVGQHNYDVTPLQWMA 442
+D VQDV + R V F++G + D L+ +A
Sbjct: 156 RPQDSVQDVSAR----ARASGVELFAIGVGSVDKATLRQIA 192
>gi|48928019 Nedd4 binding protein 1 [Homo sapiens]
Length = 896
Score = 39.7 bits (91), Expect = 0.017
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 107 VQENEPQKLVEKVAG---DIESLLDRKVQALKRLADAAENFQKAHRWQDNIKEEDIVYYD 163
V + P L + + G D E+L + ++ +R +D+ E K +N++E +I++ D
Sbjct: 254 VLSSSPDVLFDPINGLTPDEEALSNERICQKRRFSDSEERHTKKQFSLENVQEGEILH-D 312
Query: 164 AK-------ADAELDDPESEDVERGSKASTLRLDFIEDPNFKNKVNYSYAAVQIPTDIYK 216
AK AD +SE++ K +T +++ NF + YS V+ +Y
Sbjct: 313 AKTLAGNVIADLSDSSADSENLSPDIKETTEEMEYNILVNFFKTMGYSQEIVEKVIKVYG 372
Query: 217 GSTVILNELNWTEALENVFMENR 239
ST L L E F E+R
Sbjct: 373 PSTEPLLLLEEIEKENKRFQEDR 395
>gi|70778918 inter-alpha globulin inhibitor H2 polypeptide [Homo
sapiens]
Length = 946
Score = 39.7 bits (91), Expect = 0.017
Identities = 26/117 (22%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 289 PKDMVIIVDVSGSVSGLTLKLMKTSVCEMLDTLSDDDYVNVASFNEKAQPVSCFTHLVQA 348
PK+++ ++DVSGS+ G+ +K ++ +LD L +D+ +V FN+ + + L+ A
Sbjct: 308 PKNILFVIDVSGSMWGVKMKQTVEAMKTILDDLRAEDHFSVIDFNQNIR--TWRNDLISA 365
Query: 349 NVRNKKVFKEAVQGMVAKGTTGYKAGF---EYAFDQLQNSNITRANCNKMIMMFTDG 402
K ++ + G T + ++ N + N +I++ +DG
Sbjct: 366 TKTQVADAKRYIEKIQPSGGTNINEALLRAIFILNEANNLGLLDPNSVSLIILVSDG 422
>gi|11321565 matrilin 3 precursor [Homo sapiens]
Length = 486
Score = 38.5 bits (88), Expect = 0.037
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 287 SSPKDMVIIVDVSGSVSGLTLKLMKTSVCEMLDTLS---DDDYVNVASFNEKAQPVSCFT 343
S P D+V I+D S SV L +KT V ++DTL D V V ++ +
Sbjct: 79 SRPLDLVFIIDSSRSVRPLEFTKVKTFVSRIIDTLDIGPADTRVAVVNYASTVK----IE 134
Query: 344 HLVQANVRNKKVFKEAVQGMVAKGTTGYKAG------FEYAFDQLQNSNITRANCNKMIM 397
+QA +K+ K+AV G + +TG +G + AF + +N K+ +
Sbjct: 135 FQLQA-YTDKQSLKQAV-GRITPLSTGTMSGLAIQTAMDEAFTVEAGAREPSSNIPKVAI 192
Query: 398 MFTDGGEDRVQDVFEKYNWPNRTVRVFTFSVGQHNYDVTPLQWMA 442
+ TDG R QD + + + ++VG D+ L+ MA
Sbjct: 193 IVTDG---RPQDQVNEVAARAQASGIELYAVGVDRADMASLKMMA 234
>gi|118600977 C3 and PZP-like, alpha-2-macroglobulin domain
containing 8 [Homo sapiens]
Length = 1932
Score = 37.4 bits (85), Expect = 0.082
Identities = 24/47 (51%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 14 GPARTAR----PWPGCGPHPGPGTRRPTSGPPRP--LWLLLPLLPLL 54
G ARTA PWP GP P PG P S LW LLPLL LL
Sbjct: 17 GGARTAALGPWPWPSPGPAPSPGAAPPRSRKMSGALLWPLLPLLLLL 63
>gi|4501913 ADAM metallopeptidase domain 23 preproprotein [Homo
sapiens]
Length = 832
Score = 36.6 bits (83), Expect = 0.14
Identities = 37/121 (30%), Positives = 50/121 (41%), Gaps = 19/121 (15%)
Query: 25 CGPHPGPGTRRPTSGPPRP----LWLLLPLLPLLAAP------GASAYSFPQQHTMQHWA 74
CGP GP P S P R L L+L LLP LAA GA+A S P HW
Sbjct: 23 CGPQRGPAGSVPASAPARTPPCRLLLVLLLLPPLAASSRPRAWGAAAPSAP------HWN 76
Query: 75 RRLEQEVDGVMRIFGGVQQLREIYKDNRNLFEVQENEPQKLVEKVAGDIES---LLDRKV 131
E+ + + +QQ N + + P +L+ + D ES +LD K
Sbjct: 77 ETAEKNLGVLADEDNTLQQNSSSNISYSNAMQKEITLPSRLIYYINQDSESPYHVLDTKA 136
Query: 132 Q 132
+
Sbjct: 137 R 137
>gi|63025220 ring finger protein 215 [Homo sapiens]
Length = 377
Score = 36.6 bits (83), Expect = 0.14
Identities = 23/42 (54%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
Query: 26 GPHPGPGTRRPTSGPP---RPLWLLLPLLPL---LAAPGASA 61
GP P R P PP PL LLLPLLPL LA PGA+A
Sbjct: 2 GPAARPALRSPPPPPPPPPSPLLLLLPLLPLWLGLAGPGAAA 43
>gi|122937187 glycosyltransferase 8 domain containing 4 [Homo
sapiens]
Length = 443
Score = 36.2 bits (82), Expect = 0.18
Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 2 AVPARTCGASRPGPARTARPWPGCGPHPG--PGTRRPTSGPPRP 43
A+PAR A + PA WPG G PG PG RR PRP
Sbjct: 34 ALPARPASAPQRHPAPVPARWPGPGALPGASPGVRRRRPPRPRP 77
>gi|213513324 hypothetical protein LOC401115 [Homo sapiens]
Length = 139
Score = 35.0 bits (79), Expect = 0.41
Identities = 23/48 (47%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 10 ASRPG-PARTARPWPGCGPHPGPGTRRPTSGPPRPLWLLLPLLPLLAA 56
A+ PG P A P P P P R P S PP PL LLL L LL A
Sbjct: 27 AAGPGVPEPRAAPLPLLAMAPPPACRSPMSPPPPPLLLLLLSLALLGA 74
>gi|239741603 PREDICTED: hypothetical protein XP_002342247 [Homo
sapiens]
Length = 351
Score = 34.7 bits (78), Expect = 0.53
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 19 ARPWPGCGPHPGPGTRRPTSGPPRPLWLLLPLLPLLAAPGASAYSFPQQHTMQHWARRLE 78
A P P P P PG RRP P P+ + P+LPLL P + P H WA E
Sbjct: 165 AAPAPAARPSPDPG-RRPPPAAPAPVVHVGPVLPLLHDPVGVPLA-PLGHGGVDWAENKE 222
Query: 79 Q 79
+
Sbjct: 223 R 223
>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
Length = 261
Score = 34.7 bits (78), Expect = 0.53
Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 3 VPARTCGA-SRPGPARTARPWPGCGPHPGPGTRRPTSGPPRPLWLLLPLL-PLLAAPG 58
VP + CG R GP PG GPG RRP P RP L +L PL A PG
Sbjct: 24 VPCQICGPRERHGPRTPGGQLPGA--RRGPGPRRPAPLPARPPGALGSVLRPLRARPG 79
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 34.3 bits (77), Expect = 0.70
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 3 VPARTCGASRPGPARTARPWPGCGPHPGP-GTRRPTSGPPR---PLWLLLPLLPLLAAPG 58
V GA+ GPA A PG P P P G RP G P+ P PL+P AP
Sbjct: 63 VSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPP 122
Query: 59 ASAYSFPQQ 67
A+ P +
Sbjct: 123 AAKLRPPPE 131
Score = 32.3 bits (72), Expect = 2.6
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 4 PARTCGASRPGPAR-TARPWPGCGPHPGPGTRRPTSGPPRP 43
PA A GPA AR PG GP PGPG P GP +P
Sbjct: 152 PAPAGPAKPAGPAALAARAGPGPGPGPGPG---PGPGPGKP 189
Score = 32.0 bits (71), Expect = 3.5
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 9/43 (20%)
Query: 2 AVPARTCG----ASRPGPARTARPWPGCGPHPGPGTRRPTSGP 40
A PA+ G A+R GP P PG GP PGPG +P +GP
Sbjct: 155 AGPAKPAGPAALAARAGPG----PGPGPGPGPGPGPGKP-AGP 192
>gi|192807309 TNFAIP3 interacting protein 3 [Homo sapiens]
Length = 325
Score = 33.5 bits (75), Expect = 1.2
Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 20/133 (15%)
Query: 92 QQLREIYKDNRNLFEVQENEPQKLVEKVAGDIESLLDRKVQALKRLADAAENFQKAHRWQ 151
Q++R + K + L EV + Q+ ++ L +RKV LK DAAE F
Sbjct: 38 QKIRCLEKQRKELLEVNQQWDQQF-----RSMKELYERKVAELKTKLDAAERFL------ 86
Query: 152 DNIKEEDIVYYDAKADAELDDPESEDVERGSKASTLRLDFIEDPNFKNKVNYSYAAVQIP 211
+ +E+D K D + +D D+ R RL + K ++N ++
Sbjct: 87 -STREKDPHQRQRKDDRQREDDRQRDLTRD------RLQ--REEKEKERLNEELHELKEE 137
Query: 212 TDIYKGSTVILNE 224
+ KG + N+
Sbjct: 138 NKLLKGKNTLANK 150
>gi|192807305 TNFAIP3 interacting protein 3 [Homo sapiens]
Length = 325
Score = 33.5 bits (75), Expect = 1.2
Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 20/133 (15%)
Query: 92 QQLREIYKDNRNLFEVQENEPQKLVEKVAGDIESLLDRKVQALKRLADAAENFQKAHRWQ 151
Q++R + K + L EV + Q+ ++ L +RKV LK DAAE F
Sbjct: 38 QKIRCLEKQRKELLEVNQQWDQQF-----RSMKELYERKVAELKTKLDAAERFL------ 86
Query: 152 DNIKEEDIVYYDAKADAELDDPESEDVERGSKASTLRLDFIEDPNFKNKVNYSYAAVQIP 211
+ +E+D K D + +D D+ R RL + K ++N ++
Sbjct: 87 -STREKDPHQRQRKDDRQREDDRQRDLTRD------RLQ--REEKEKERLNEELHELKEE 137
Query: 212 TDIYKGSTVILNE 224
+ KG + N+
Sbjct: 138 NKLLKGKNTLANK 150
>gi|55741845 valyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
Length = 1063
Score = 33.5 bits (75), Expect = 1.2
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 29/122 (23%)
Query: 39 GPPRPLW--------LLLPLLPLLA---------------APGASAYSFPQQHTMQHWAR 75
GPP+ L+ LL PL+P LA AP S +P +++HW R
Sbjct: 837 GPPQVLFSCADLGLRLLAPLMPFLAEELWQRLPPRPGCPPAPSISVAPYPSACSLEHW-R 895
Query: 76 RLEQEVDGVMRIFGGVQQLREIYKDNRNLFEVQENEPQKLVEKVAGDIESLLDRKVQALK 135
+ E E R F VQ++ ++ + R +++ + P+ L++ + L + ++ L
Sbjct: 896 QPELE-----RRFSRVQEVVQVLRALRATYQLTKARPRVLLQSSEPGDQGLFEAFLEPLG 950
Query: 136 RL 137
L
Sbjct: 951 TL 952
>gi|52345387 meteorin, glial cell differentiation regulator-like
[Homo sapiens]
Length = 311
Score = 33.5 bits (75), Expect = 1.2
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 9/55 (16%)
Query: 9 GASRPGPARTARPWPGCGPHPGPGTRRPTSGPPRPLWLLLPLLPLLAAPGASAYS 63
GA+R R +PWP P PGP PP PL LLL LL L + YS
Sbjct: 3 GAARAAWGRAGQPWPR-PPAPGP--------PPPPLPLLLLLLAGLLGGAGAQYS 48
>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sapiens]
Length = 1747
Score = 33.1 bits (74), Expect = 1.5
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 6 RTCGASRPGPARTARPWPGCGPHPG-PGTRRPTSGPPRPLW 45
R+ A P+ + P P GP PG PG RRP P LW
Sbjct: 1644 RSVSARSRSPSPSPLPSPASGPGPGAPGPRRPFQQKPLQLW 1684
>gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo sapiens]
Length = 839
Score = 33.1 bits (74), Expect = 1.5
Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 41/208 (19%)
Query: 25 CGPHPGPGTRRPTSGPPRPLWLLLPLLPLLAAPGASAYSFPQQHTMQHWARRL------- 77
C PHP +P P +P L LP+L P S P + + + A L
Sbjct: 160 CSPHPLTVDTQPEQAPQKPRLLEENALPVLQVP-----SLPLKDSQELTASLLSTGSQKL 214
Query: 78 -------EQEVDGVMRIFGGV-QQLREIYKDNRNL---------FEVQENEPQKLVEKVA 120
+ V ++ +G + Q + +Y+D+R +E ++N + +V++++
Sbjct: 215 VKIEEVADVAVSFILEEWGHLDQSQKSLYRDDRKENYGSITSMGYESRDN-MELIVKQIS 273
Query: 121 GDIES------LLDRKVQALKRLADAAENFQKAHRWQDN-----IKEEDIVYYDAKADAE 169
D ES +R V A+ ++ RWQ N ++ D A +
Sbjct: 274 DDSESHWVAPEHTERSVPQDPDFAEVSDLKGMVQRWQVNPTVGKSRQNPSQKRDLDAITD 333
Query: 170 LDDPESEDVERGSKASTLRLDFIEDPNF 197
+ +S ERG + S F++ NF
Sbjct: 334 ISPKQSTHGERGHRCSDCGKFFLQASNF 361
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,162,121
Number of Sequences: 37866
Number of extensions: 2335987
Number of successful extensions: 8649
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 8412
Number of HSP's gapped (non-prelim): 217
length of query: 1143
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1030
effective length of database: 13,968,660
effective search space: 14387719800
effective search space used: 14387719800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.