BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|53729334 membrane-associated ring finger (C3HC4) 2 isoform 2 [Homo sapiens] (176 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|53729334 membrane-associated ring finger (C3HC4) 2 isoform 2 ... 375 e-104 gi|53729332 membrane-associated ring finger (C3HC4) 2 isoform 1 ... 269 8e-73 gi|53729330 membrane-associated ring finger (C3HC4) 2 isoform 1 ... 269 8e-73 gi|30425370 membrane-associated ring finger (C3HC4) 3 [Homo sapi... 162 1e-40 gi|50539414 cellular modulator of immune recognition isoform 7 [... 78 3e-15 gi|50539412 cellular modulator of immune recognition isoform 6 [... 78 3e-15 gi|50539410 cellular modulator of immune recognition isoform 8 [... 78 3e-15 gi|8923613 membrane-associated RING-CH protein I [Homo sapiens] 75 3e-14 gi|57977325 membrane-associated ring finger (C3HC4) 4 [Homo sapi... 60 1e-09 gi|40255016 membrane-associated RING-CH protein IX [Homo sapiens] 58 4e-09 gi|33589846 membrane-associated ring finger (C3HC4) 6 [Homo sapi... 57 8e-09 gi|156523244 membrane-associated ring finger (C3HC4) 11 [Homo sa... 55 4e-08 gi|154937342 ring finger protein 190 [Homo sapiens] 54 5e-08 gi|154937340 ring finger protein 190 [Homo sapiens] 54 5e-08 gi|12383066 axotrophin [Homo sapiens] 50 8e-07 gi|231573214 zinc finger protein 294 [Homo sapiens] 36 0.015 gi|8923415 membrane-associated ring finger (C3HC4) 5 [Homo sapiens] 33 0.13 gi|21389515 ring finger protein 145 [Homo sapiens] 33 0.13 gi|224451128 eyes shut homolog isoform 1 [Homo sapiens] 31 0.63 gi|58331204 ring finger protein 150 [Homo sapiens] 31 0.63 gi|55770876 notch4 preproprotein [Homo sapiens] 30 0.83 gi|116235456 ring finger protein 214 [Homo sapiens] 30 1.1 gi|116235451 ring finger protein 214 [Homo sapiens] 30 1.1 gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo sa... 30 1.4 gi|89363020 nuclear transcription factor, X-box binding-like 1 [... 29 1.8 gi|63079718 three prime repair exonuclease 2 [Homo sapiens] 29 2.4 gi|4504695 inhibitor of growth family, member 2 [Homo sapiens] 29 2.4 gi|5453976 protein kinase C, theta [Homo sapiens] 29 2.4 gi|186972143 tripeptidyl peptidase II [Homo sapiens] 29 2.4 gi|29788758 ring finger protein 130 [Homo sapiens] 29 2.4 >gi|53729334 membrane-associated ring finger (C3HC4) 2 isoform 2 [Homo sapiens] Length = 176 Score = 375 bits (963), Expect = e-104 Identities = 176/176 (100%), Positives = 176/176 (100%) Query: 1 MTTGDCCHLPGSLCDCSGSPAFSKVVEATGLGPPQYVAQVTSRDGRLLSTVIRALDTPSD 60 MTTGDCCHLPGSLCDCSGSPAFSKVVEATGLGPPQYVAQVTSRDGRLLSTVIRALDTPSD Sbjct: 1 MTTGDCCHLPGSLCDCSGSPAFSKVVEATGLGPPQYVAQVTSRDGRLLSTVIRALDTPSD 60 Query: 61 GPFCRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVEKRPR 120 GPFCRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVEKRPR Sbjct: 61 GPFCRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVEKRPR 120 Query: 121 PLTEVSFRYHCQLYSEWRKTNQKVRLKIREADSPEGPQHSPLAAGLLKKVAEETPV 176 PLTEVSFRYHCQLYSEWRKTNQKVRLKIREADSPEGPQHSPLAAGLLKKVAEETPV Sbjct: 121 PLTEVSFRYHCQLYSEWRKTNQKVRLKIREADSPEGPQHSPLAAGLLKKVAEETPV 176 >gi|53729332 membrane-associated ring finger (C3HC4) 2 isoform 1 [Homo sapiens] Length = 246 Score = 269 bits (688), Expect = 8e-73 Identities = 124/124 (100%), Positives = 124/124 (100%) Query: 1 MTTGDCCHLPGSLCDCSGSPAFSKVVEATGLGPPQYVAQVTSRDGRLLSTVIRALDTPSD 60 MTTGDCCHLPGSLCDCSGSPAFSKVVEATGLGPPQYVAQVTSRDGRLLSTVIRALDTPSD Sbjct: 1 MTTGDCCHLPGSLCDCSGSPAFSKVVEATGLGPPQYVAQVTSRDGRLLSTVIRALDTPSD 60 Query: 61 GPFCRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVEKRPR 120 GPFCRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVEKRPR Sbjct: 61 GPFCRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVEKRPR 120 Query: 121 PLTE 124 PLTE Sbjct: 121 PLTE 124 Score = 111 bits (277), Expect = 4e-25 Identities = 53/54 (98%), Positives = 53/54 (98%) Query: 123 TEVSFRYHCQLYSEWRKTNQKVRLKIREADSPEGPQHSPLAAGLLKKVAEETPV 176 T VSFRYHCQLYSEWRKTNQKVRLKIREADSPEGPQHSPLAAGLLKKVAEETPV Sbjct: 193 TLVSFRYHCQLYSEWRKTNQKVRLKIREADSPEGPQHSPLAAGLLKKVAEETPV 246 >gi|53729330 membrane-associated ring finger (C3HC4) 2 isoform 1 [Homo sapiens] Length = 246 Score = 269 bits (688), Expect = 8e-73 Identities = 124/124 (100%), Positives = 124/124 (100%) Query: 1 MTTGDCCHLPGSLCDCSGSPAFSKVVEATGLGPPQYVAQVTSRDGRLLSTVIRALDTPSD 60 MTTGDCCHLPGSLCDCSGSPAFSKVVEATGLGPPQYVAQVTSRDGRLLSTVIRALDTPSD Sbjct: 1 MTTGDCCHLPGSLCDCSGSPAFSKVVEATGLGPPQYVAQVTSRDGRLLSTVIRALDTPSD 60 Query: 61 GPFCRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVEKRPR 120 GPFCRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVEKRPR Sbjct: 61 GPFCRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVEKRPR 120 Query: 121 PLTE 124 PLTE Sbjct: 121 PLTE 124 Score = 111 bits (277), Expect = 4e-25 Identities = 53/54 (98%), Positives = 53/54 (98%) Query: 123 TEVSFRYHCQLYSEWRKTNQKVRLKIREADSPEGPQHSPLAAGLLKKVAEETPV 176 T VSFRYHCQLYSEWRKTNQKVRLKIREADSPEGPQHSPLAAGLLKKVAEETPV Sbjct: 193 TLVSFRYHCQLYSEWRKTNQKVRLKIREADSPEGPQHSPLAAGLLKKVAEETPV 246 >gi|30425370 membrane-associated ring finger (C3HC4) 3 [Homo sapiens] Length = 253 Score = 162 bits (411), Expect = 1e-40 Identities = 83/131 (63%), Positives = 95/131 (72%), Gaps = 7/131 (5%) Query: 1 MTTGDCCHLPGSLCDCSGSPA-FSKVVEATGL---GPPQYVAQVTSRDGRLLSTVIRALD 56 MTT C HLP L DC+ S A K VE G G PQYV QV+++DG+LLSTV+R L Sbjct: 1 MTTSRCSHLPEVLPDCTSSAAPVVKTVEDCGSLVNGQPQYVMQVSAKDGQLLSTVVRTLA 60 Query: 57 TPS---DGPFCRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF 113 T S D P CRICHEG++ E LLSPC CTGTLG +H+SCLE WLSSSNTSYCELCH F Sbjct: 61 TQSPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRF 120 Query: 114 AVEKRPRPLTE 124 AVE++PRPL E Sbjct: 121 AVERKPRPLVE 131 Score = 51.2 bits (121), Expect = 5e-07 Identities = 26/54 (48%), Positives = 37/54 (68%) Query: 123 TEVSFRYHCQLYSEWRKTNQKVRLKIREADSPEGPQHSPLAAGLLKKVAEETPV 176 T VSFRYHC+LY+EWR+TNQ+V L I ++ + Q S L +K+ ++ET V Sbjct: 200 TLVSFRYHCRLYNEWRRTNQRVILLIPKSVNVPSNQPSLLGLHSVKRNSKETVV 253 >gi|50539414 cellular modulator of immune recognition isoform 7 [Homo sapiens] Length = 291 Score = 78.2 bits (191), Expect = 3e-15 Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 1/76 (1%) Query: 48 LSTVIRALDTPSDGPFCRICH-EGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYC 106 +S+ R TPS CRICH EG + L++PC CTG+L VH++CL++W+ SS+T C Sbjct: 64 VSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCC 123 Query: 107 ELCHTEFAVEKRPRPL 122 ELC EF +E + +PL Sbjct: 124 ELCKYEFIMETKLKPL 139 >gi|50539412 cellular modulator of immune recognition isoform 6 [Homo sapiens] Length = 291 Score = 78.2 bits (191), Expect = 3e-15 Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 1/76 (1%) Query: 48 LSTVIRALDTPSDGPFCRICH-EGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYC 106 +S+ R TPS CRICH EG + L++PC CTG+L VH++CL++W+ SS+T C Sbjct: 64 VSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCC 123 Query: 107 ELCHTEFAVEKRPRPL 122 ELC EF +E + +PL Sbjct: 124 ELCKYEFIMETKLKPL 139 >gi|50539410 cellular modulator of immune recognition isoform 8 [Homo sapiens] Length = 291 Score = 78.2 bits (191), Expect = 3e-15 Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 1/76 (1%) Query: 48 LSTVIRALDTPSDGPFCRICH-EGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYC 106 +S+ R TPS CRICH EG + L++PC CTG+L VH++CL++W+ SS+T C Sbjct: 64 VSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCC 123 Query: 107 ELCHTEFAVEKRPRPL 122 ELC EF +E + +PL Sbjct: 124 ELCKYEFIMETKLKPL 139 >gi|8923613 membrane-associated RING-CH protein I [Homo sapiens] Length = 272 Score = 75.1 bits (183), Expect = 3e-14 Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 58 PSDGPFCRICH-EGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVE 116 PS CRICH EG L++PC CTGTL VH+SCL +W+ SS+T CELC +F +E Sbjct: 57 PSTQDICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIME 116 Query: 117 KRPRPL 122 + +PL Sbjct: 117 TKLKPL 122 >gi|57977325 membrane-associated ring finger (C3HC4) 4 [Homo sapiens] Length = 410 Score = 59.7 bits (143), Expect = 1e-09 Identities = 26/62 (41%), Positives = 36/62 (58%) Query: 54 ALDTPSDGPFCRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF 113 +LD+ P CRIC +G LLSPC C G++ H+ CL KW+S CELC+ ++ Sbjct: 153 SLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKY 212 Query: 114 AV 115 V Sbjct: 213 HV 214 >gi|40255016 membrane-associated RING-CH protein IX [Homo sapiens] Length = 346 Score = 58.2 bits (139), Expect = 4e-09 Identities = 25/62 (40%), Positives = 37/62 (59%) Query: 54 ALDTPSDGPFCRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF 113 +LD+ P CRIC +G LLSPC C G++ H+ CL +W+S + CELC+ ++ Sbjct: 100 SLDSGLRTPQCRICFQGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKY 159 Query: 114 AV 115 V Sbjct: 160 QV 161 >gi|33589846 membrane-associated ring finger (C3HC4) 6 [Homo sapiens] Length = 910 Score = 57.0 bits (136), Expect = 8e-09 Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Query: 55 LDTPSDGPFCRICH-EGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF 113 +DT + CR+C EG + L PC CTG++ +H+ CL +WL S YCELC F Sbjct: 1 MDTAEED-ICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRF 59 Query: 114 A 114 A Sbjct: 60 A 60 >gi|156523244 membrane-associated ring finger (C3HC4) 11 [Homo sapiens] Length = 402 Score = 54.7 bits (130), Expect = 4e-08 Identities = 22/48 (45%), Positives = 30/48 (62%) Query: 62 PFCRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELC 109 P C+IC +GA LL+PC C G++ H+ CL KW+S + CELC Sbjct: 168 PICKICFQGAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWTCELC 215 >gi|154937342 ring finger protein 190 [Homo sapiens] Length = 808 Score = 54.3 bits (129), Expect = 5e-08 Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 10/71 (14%) Query: 56 DTPSDGPFCRICH--EGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTS--------Y 105 D+ +G CRIC G+ LL PCGC G+L VH+ CL+KWL TS Sbjct: 651 DSEEEGDLCRICQIAGGSPSNPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLGAVKT 710 Query: 106 CELCHTEFAVE 116 CE+C V+ Sbjct: 711 CEMCKQGLLVD 721 >gi|154937340 ring finger protein 190 [Homo sapiens] Length = 808 Score = 54.3 bits (129), Expect = 5e-08 Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 10/71 (14%) Query: 56 DTPSDGPFCRICH--EGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTS--------Y 105 D+ +G CRIC G+ LL PCGC G+L VH+ CL+KWL TS Sbjct: 651 DSEEEGDLCRICQIAGGSPSNPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLGAVKT 710 Query: 106 CELCHTEFAVE 116 CE+C V+ Sbjct: 711 CEMCKQGLLVD 721 >gi|12383066 axotrophin [Homo sapiens] Length = 704 Score = 50.4 bits (119), Expect = 8e-07 Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 14/82 (17%) Query: 42 SRDGRLLSTVIRAL----DTPSDGPFCRICHEGA--NGECLLSPCGCTGTLGAVHKSCLE 95 SRD L + +L +G CRIC A + L+ PC CTG+L VH+ C++ Sbjct: 526 SRDPERLQKIKESLLLEDSEEEEGDLCRICQMAAASSSNLLIEPCKCTGSLQYVHQDCMK 585 Query: 96 KWLSSSNTS--------YCELC 109 KWL + S CELC Sbjct: 586 KWLQAKINSGSSLEAVTTCELC 607 >gi|231573214 zinc finger protein 294 [Homo sapiens] Length = 1812 Score = 36.2 bits (82), Expect = 0.015 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Query: 64 CRICHEGANG-ECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF 113 C IC +G L C H +CL KW +SSN S C LC F Sbjct: 1761 CMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRETF 1811 >gi|8923415 membrane-associated ring finger (C3HC4) 5 [Homo sapiens] Length = 278 Score = 33.1 bits (74), Expect = 0.13 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 6/43 (13%) Query: 79 PCGCTGTLGAVHKSCLEKWL------SSSNTSYCELCHTEFAV 115 PC C G+ VH++CL++W+ +S+ C C+ E+ + Sbjct: 32 PCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEYLI 74 >gi|21389515 ring finger protein 145 [Homo sapiens] Length = 691 Score = 33.1 bits (74), Expect = 0.13 Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 18/99 (18%) Query: 64 CRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVEKR-PRPL 122 C IC++ +++PC H CL+KWL T C LCH + P Sbjct: 565 CAICYQDMKS-AVITPCS-----HFFHAGCLKKWLYVQET--CPLCHCHLKNSSQLPGLG 616 Query: 123 TEVSFRYHCQLYSEWRKTNQKVRLKIREADSPEGPQHSP 161 TE + H + + +E P G +H+P Sbjct: 617 TEPVLQPH---------AGAEQNVMFQEGTEPPGQEHTP 646 >gi|224451128 eyes shut homolog isoform 1 [Homo sapiens] Length = 3144 Score = 30.8 bits (68), Expect = 0.63 Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 13/104 (12%) Query: 60 DGPFCRICHEGANG--------ECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHT 111 DG C +C+ G G +C+L+ C T +H S LS ++CE Sbjct: 715 DGFSC-LCNPGYVGIRCEQDIDDCILNACEHNSTCKDLHLSYQCVCLSDWEGNFCEQESN 773 Query: 112 EFAVE--KRPRPLTEVSFRYHCQLYSEWRKTNQKVRLKIREADS 153 E + K T++ Y C+ S W T Q +I E DS Sbjct: 774 ECKMNPCKNNSTCTDLYKSYRCECTSGW--TGQNCSEEINECDS 815 >gi|58331204 ring finger protein 150 [Homo sapiens] Length = 438 Score = 30.8 bits (68), Expect = 0.63 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 9/56 (16%) Query: 56 DTPSDGPFCRICHEG--ANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELC 109 +T SD C +C EG N + PC HKSC++ WL T C +C Sbjct: 270 ETESDFDNCAVCIEGYKPNDVVRILPCR-----HLFHKSCVDPWLLDHRT--CPMC 318 >gi|55770876 notch4 preproprotein [Homo sapiens] Length = 2003 Score = 30.4 bits (67), Expect = 0.83 Identities = 39/127 (30%), Positives = 48/127 (37%), Gaps = 35/127 (27%) Query: 7 CHLP----GSLCDCSGSPAFSKVVE--ATGLGPPQ-YVAQVT-SRDGRLLSTVIRALD-- 56 CH P GSLC +P S+ + AT + P Y+ Q DG+ S + A Sbjct: 916 CHCPPGFQGSLCQDHVNPCESRPCQNGATCMAQPSGYLCQCAPGYDGQNCSKELDACQSQ 975 Query: 57 --------TPSDGPFCRICHEGANG--------ECLLSPCGCTGTLGAVHKSCLEKWLSS 100 TP G F C G G ECL PC TGT A H S Sbjct: 976 PCHNHGTCTPKPGGFHCACPPGFVGLRCEGDVDECLDQPCHPTGT-AACH--------SL 1026 Query: 101 SNTSYCE 107 +N YC+ Sbjct: 1027 ANAFYCQ 1033 >gi|116235456 ring finger protein 214 [Homo sapiens] Length = 703 Score = 30.0 bits (66), Expect = 1.1 Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 4/59 (6%) Query: 53 RALDTPSDGPFCRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHT 111 R+ P+ C +C + L P CT L HK C++ W ++ C C T Sbjct: 647 RSSHAPATCKLCLMCQKLVQPS-ELHPMACTHVL---HKECIKFWAQTNTNDTCPFCPT 701 >gi|116235451 ring finger protein 214 [Homo sapiens] Length = 703 Score = 30.0 bits (66), Expect = 1.1 Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 4/59 (6%) Query: 53 RALDTPSDGPFCRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHT 111 R+ P+ C +C + L P CT L HK C++ W ++ C C T Sbjct: 647 RSSHAPATCKLCLMCQKLVQPS-ELHPMACTHVL---HKECIKFWAQTNTNDTCPFCPT 701 >gi|109240556 RUN and FYVE domain-containing 2 isoform a [Homo sapiens] Length = 641 Score = 29.6 bits (65), Expect = 1.4 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 9/36 (25%) Query: 97 WLSSSNTSYCELCHTEFAVEKRPRPLTEVSFRYHCQ 132 WL ++C+LC EF++ KR ++HC+ Sbjct: 572 WLKDKEATHCKLCEKEFSLSKR---------KHHCR 598 >gi|89363020 nuclear transcription factor, X-box binding-like 1 [Homo sapiens] Length = 911 Score = 29.3 bits (64), Expect = 1.8 Identities = 12/48 (25%), Positives = 19/48 (39%) Query: 82 CTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVEKRPRPLTEVSFRY 129 C+G H C++KW S + +F + P P + F Y Sbjct: 176 CSGCFCIFHMPCIQKWAKDSQFLVSSVTDDDFGKKDCPWPCPKCRFEY 223 >gi|63079718 three prime repair exonuclease 2 [Homo sapiens] Length = 236 Score = 28.9 bits (63), Expect = 2.4 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 12 SLCDCSGSPAFSKVVEATGLGPPQYV-AQVTSRDGRLLSTVIRALDTPSDGPFCRICHEG 70 +LC C P +K E TGL + DG ++ T ++A + GP C + H G Sbjct: 61 TLCMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRT-LQAFLSRQAGPICLVAHNG 119 >gi|4504695 inhibitor of growth family, member 2 [Homo sapiens] Length = 280 Score = 28.9 bits (63), Expect = 2.4 Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 14/108 (12%) Query: 5 DCCHLPGSLCDCSGSPAFSKVVEATGLGPPQYVAQVTSRDGRLLSTVIRALDTPSDGPFC 64 D CH+ + DC P K ++ + + ++ R S V A+D P++ +C Sbjct: 162 DLCHMANGIEDCDDQPPKEKKSKSA-----KKKKRSKAKQEREASPVEFAID-PNEPTYC 215 Query: 65 RICHEGANGECLLSPCGCTGTLGAV---HKSCLEKWLSSSNTSYCELC 109 +C++ + GE + GC + H SC+ YC C Sbjct: 216 -LCNQVSYGEMI----GCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKC 258 >gi|5453976 protein kinase C, theta [Homo sapiens] Length = 706 Score = 28.9 bits (63), Expect = 2.4 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Query: 63 FCRICHEGANGECLLSPCG--CTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVEK 117 FC +CHE G L+ G C A+HK C++K ++ S T F E+ Sbjct: 172 FCSVCHEFVWG---LNKQGYQCRQCNAAIHKKCIDKVIAKCTGSAINSRETMFHKER 225 >gi|186972143 tripeptidyl peptidase II [Homo sapiens] Length = 1249 Score = 28.9 bits (63), Expect = 2.4 Identities = 13/50 (26%), Positives = 21/50 (42%) Query: 10 PGSLCDCSGSPAFSKVVEATGLGPPQYVAQVTSRDGRLLSTVIRALDTPS 59 PG G P +++ TG G +V +DG ++ R L P+ Sbjct: 52 PGMQVTTDGKPKIVDIIDTTGSGDVNTATEVEPKDGEIVGLSGRVLKIPA 101 >gi|29788758 ring finger protein 130 [Homo sapiens] Length = 419 Score = 28.9 bits (63), Expect = 2.4 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 9/56 (16%) Query: 56 DTPSDGPFCRICHEG--ANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELC 109 +T D C +C E N + PC HKSC++ WLS T C +C Sbjct: 256 ETDPDFDHCAVCIESYKQNDVVRILPCK-----HVFHKSCVDPWLSEHCT--CPMC 304 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.134 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,382,981 Number of Sequences: 37866 Number of extensions: 394424 Number of successful extensions: 1066 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 34 Number of HSP's that attempted gapping in prelim test: 1028 Number of HSP's gapped (non-prelim): 70 length of query: 176 length of database: 18,247,518 effective HSP length: 95 effective length of query: 81 effective length of database: 14,650,248 effective search space: 1186670088 effective search space used: 1186670088 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.