Guide to the Human Genome
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Name: TMEM62 Sequence: fasta or formatted (643aa) NCBI GI: 52851437
Description:

transmembrane protein 62

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         33           4
 C cysteine            1.4          9           2
 D aspartate           3.6         23           1
 E glutamate           3.1         20           2
 F phenylalanine       6.8         44           2
 G glycine             6.5         42           2
 H histidine           4.8         31           2
 I isoleucine          7.5         48           2
 K lysine              4.4         28           3
 L leucine            13.1         84           4
 M methionine          1.9         12           1
 N asparagine          3.3         21           2
 P proline             5.1         33           2
 Q glutamine           2.8         18           1
 R arginine            5.0         32           2
 S serine              8.4         54           2
 T threonine           5.3         34           2
 V valine              6.1         39           2
 W tryptophan          1.9         12           1
 Y tyrosine            4.0         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 62 
DBP                   0.009   D site of albumin promoter (albumin D-box) binding p...
SASH1                 0.006   SAM and SH3 domain containing 1 
MXRA7                 0.006   transmembrane anchor protein 1 isoform 3 
MXRA7                 0.006   transmembrane anchor protein 1 isoform 2 
MXRA7                 0.006   transmembrane anchor protein 1 isoform 1 
OR10G2                0.006   olfactory receptor, family 10, subfamily G, member 2...
PER1                  0.006   period 1 
C6orf174              0.006   hypothetical protein LOC387104 
ACP5                  0.006   acid phosphatase 5, tartrate resistant precursor [H...
ACP5                  0.006   acid phosphatase 5, tartrate resistant precursor [H...
ACP5                  0.006   acid phosphatase 5, tartrate resistant precursor [H...
ACP5                  0.006   acid phosphatase 5, tartrate resistant precursor [Hom...
RALGDS                0.006   ral guanine nucleotide dissociation stimulator isofo...
RALGDS                0.006   ral guanine nucleotide dissociation stimulator isof...
CROCC                 0.006   ciliary rootlet coiled-coil 
CEBPD                 0.006   CCAAT/enhancer binding protein delta 
ZIC5                  0.006   zinc finger protein of the cerebellum 5 
FAM174B               0.005   hypothetical protein LOC400451 
MEX3C                 0.005   ring finger and KH domain containing 2 
COL18A1               0.005   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
COL18A1               0.005   alpha 1 type XVIII collagen isoform 2 precursor [Ho...
COL18A1               0.005   alpha 1 type XVIII collagen isoform 1 precursor [Ho...
KAT2A                 0.005   general control of amino acid synthesis 5-like 2 [H...
WDR44                 0.005   WD repeat domain 44 protein 
SHANK1                0.005   SH3 and multiple ankyrin repeat domains 1 
GPNMB                 0.005   glycoprotein (transmembrane) nmb isoform b precursor ...
RFNG                  0.005   radical fringe 
FAM160A2              0.005   hypothetical protein LOC84067 isoform 2 
FAM160A2              0.005   hypothetical protein LOC84067 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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