Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 52145312
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|52145312 hypothetical protein LOC118611 [Homo sapiens]
(699 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|52145312 hypothetical protein LOC118611 [Homo sapiens] 1416 0.0
gi|110349786 Alstrom syndrome 1 [Homo sapiens] 97 7e-20
gi|160420295 hypothetical protein LOC85459 [Homo sapiens] 64 5e-10
gi|33469974 activating transcription factor 4 [Homo sapiens] 42 0.001
gi|33469976 activating transcription factor 4 [Homo sapiens] 42 0.001
gi|4505101 microtubule-associated protein 7 [Homo sapiens] 42 0.003
gi|7657218 bromodomain-containing protein 4 isoform short [Homo ... 41 0.003
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 41 0.003
gi|60593054 hypothetical protein LOC494514 [Homo sapiens] 40 0.007
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 39 0.013
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 39 0.013
gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens] 39 0.021
gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens] 39 0.021
gi|15812226 transcriptional regulating factor 1 [Homo sapiens] 38 0.028
gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [H... 37 0.048
gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [H... 37 0.048
gi|4506467 radixin [Homo sapiens] 37 0.048
gi|153791535 general control of amino acid synthesis 5-like 2 [H... 37 0.048
gi|71061468 centromere protein E [Homo sapiens] 37 0.048
gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens] 37 0.062
gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens] 37 0.062
gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens] 37 0.081
gi|122937392 chromosome 19 open reading frame 29 [Homo sapiens] 37 0.081
gi|153791662 coiled-coil domain containing 71 [Homo sapiens] 37 0.081
gi|221139761 zinc finger protein 853 [Homo sapiens] 36 0.11
gi|4503509 eukaryotic translation initiation factor 3, subunit 1... 36 0.11
gi|157311604 phosphodiesterase 4D interacting protein isoform 1 ... 36 0.11
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 36 0.11
gi|225579095 S-phase cyclin A-associated protein in the ER isofo... 36 0.14
gi|161702986 ezrin [Homo sapiens] 36 0.14
>gi|52145312 hypothetical protein LOC118611 [Homo sapiens]
Length = 699
Score = 1416 bits (3666), Expect = 0.0
Identities = 699/699 (100%), Positives = 699/699 (100%)
Query: 1 MLKLSGEGLRDSYHSRRDQIALKNLQSDVTEAKSDFTKETLASQNTKMISSIVISQMIDE 60
MLKLSGEGLRDSYHSRRDQIALKNLQSDVTEAKSDFTKETLASQNTKMISSIVISQMIDE
Sbjct: 1 MLKLSGEGLRDSYHSRRDQIALKNLQSDVTEAKSDFTKETLASQNTKMISSIVISQMIDE 60
Query: 61 NKSRENRASLPLPCAIAQSRAHHAKQSLANRSGVNIHRAFALLPGRLGIPAPSDERGPEA 120
NKSRENRASLPLPCAIAQSRAHHAKQSLANRSGVNIHRAFALLPGRLGIPAPSDERGPEA
Sbjct: 61 NKSRENRASLPLPCAIAQSRAHHAKQSLANRSGVNIHRAFALLPGRLGIPAPSDERGPEA 120
Query: 121 ELPPKEERPCGGPRRGFASITITARRVGPPARALVWGTAGDSLCPKCRAEDTLFQAPPAL 180
ELPPKEERPCGGPRRGFASITITARRVGPPARALVWGTAGDSLCPKCRAEDTLFQAPPAL
Sbjct: 121 ELPPKEERPCGGPRRGFASITITARRVGPPARALVWGTAGDSLCPKCRAEDTLFQAPPAL 180
Query: 181 ANGAHPGRHQRSFACTEFSRNSSVVRLKVPEAHTGLCERRKYWVTHADDKETSFSPDTPL 240
ANGAHPGRHQRSFACTEFSRNSSVVRLKVPEAHTGLCERRKYWVTHADDKETSFSPDTPL
Sbjct: 181 ANGAHPGRHQRSFACTEFSRNSSVVRLKVPEAHTGLCERRKYWVTHADDKETSFSPDTPL 240
Query: 241 SGKSPLVFSSCVHLRVSQQCPDSIYYVDKSLSVPIEPPQIASPKMHRSVLSLNLNCSSHR 300
SGKSPLVFSSCVHLRVSQQCPDSIYYVDKSLSVPIEPPQIASPKMHRSVLSLNLNCSSHR
Sbjct: 241 SGKSPLVFSSCVHLRVSQQCPDSIYYVDKSLSVPIEPPQIASPKMHRSVLSLNLNCSSHR 300
Query: 301 LTADGVDGLVNREPISEALKQELLEGDQDLVGQRWNPGLQESHLKETPSLRRVHLGTGAC 360
LTADGVDGLVNREPISEALKQELLEGDQDLVGQRWNPGLQESHLKETPSLRRVHLGTGAC
Sbjct: 301 LTADGVDGLVNREPISEALKQELLEGDQDLVGQRWNPGLQESHLKETPSLRRVHLGTGAC 360
Query: 361 PWSGSFPLENTELANVGANQVTVRKGEKDHTTHCHASDHANQLSIHIPGWSYRAVHTKVF 420
PWSGSFPLENTELANVGANQVTVRKGEKDHTTHCHASDHANQLSIHIPGWSYRAVHTKVF
Sbjct: 361 PWSGSFPLENTELANVGANQVTVRKGEKDHTTHCHASDHANQLSIHIPGWSYRAVHTKVF 420
Query: 421 SGSSKRQQGEVCMTVSAPPVEQKPTRHFLPIGDSSPSDDCLSRDLSEPTERRHQSFLKPR 480
SGSSKRQQGEVCMTVSAPPVEQKPTRHFLPIGDSSPSDDCLSRDLSEPTERRHQSFLKPR
Sbjct: 421 SGSSKRQQGEVCMTVSAPPVEQKPTRHFLPIGDSSPSDDCLSRDLSEPTERRHQSFLKPR 480
Query: 481 ILFPGFLCPLQDVCASLQEDNGVQIESKFPKGDYTCCDLVVKIKECKKSEDPTTPEPSPA 540
ILFPGFLCPLQDVCASLQEDNGVQIESKFPKGDYTCCDLVVKIKECKKSEDPTTPEPSPA
Sbjct: 481 ILFPGFLCPLQDVCASLQEDNGVQIESKFPKGDYTCCDLVVKIKECKKSEDPTTPEPSPA 540
Query: 541 APSPAPRDGAGSPGLSEDCSESQQTPARSLTLQEALEVRKPQFISRSQERLKKLEHMVQQ 600
APSPAPRDGAGSPGLSEDCSESQQTPARSLTLQEALEVRKPQFISRSQERLKKLEHMVQQ
Sbjct: 541 APSPAPRDGAGSPGLSEDCSESQQTPARSLTLQEALEVRKPQFISRSQERLKKLEHMVQQ 600
Query: 601 RKAQRKEDLRQKQSLLPIRTSKKQFTIPHPLSDNLFKPKERCISEKEMHMRSKRIYDNLP 660
RKAQRKEDLRQKQSLLPIRTSKKQFTIPHPLSDNLFKPKERCISEKEMHMRSKRIYDNLP
Sbjct: 601 RKAQRKEDLRQKQSLLPIRTSKKQFTIPHPLSDNLFKPKERCISEKEMHMRSKRIYDNLP 660
Query: 661 EVKKKKEEQRKRVILQSNRLRAEVFKKQLLDQLLQRNAV 699
EVKKKKEEQRKRVILQSNRLRAEVFKKQLLDQLLQRNAV
Sbjct: 661 EVKKKKEEQRKRVILQSNRLRAEVFKKQLLDQLLQRNAV 699
>gi|110349786 Alstrom syndrome 1 [Homo sapiens]
Length = 4169
Score = 96.7 bits (239), Expect = 7e-20
Identities = 62/153 (40%), Positives = 91/153 (59%), Gaps = 5/153 (3%)
Query: 548 DGAGS-PGLSEDCSESQQTPARSLTLQEALEVRKPQFISRSQERLKKLEHMVQQRKAQRK 606
DG G G + P TLQE+L+ +P FISRS ER+K+L+ +VQ+RK Q
Sbjct: 4013 DGRGYLAGPGREAGRDLLRPFVRATLQESLQFHRPDFISRSGERIKRLKLIVQERKLQSM 4072
Query: 607 EDLRQKQSLLPI---RTSKKQFTIPHPLSDNLFKPKERCISEKEMHMRSKRIYDNLPEVK 663
++ +L I R + P P L K + IS+KEM RSKRIY+ LPEV+
Sbjct: 4073 LQT-ERDALFNIDRERQGHQNRMCPLPKRVFLAIQKNKPISKKEMIQRSKRIYEQLPEVQ 4131
Query: 664 KKKEEQRKRVILQSNRLRAEVFKKQLLDQLLQR 696
KK+EE++++ +S RLRA+++KK++ +QLL R
Sbjct: 4132 KKREEEKRKSEYKSYRLRAQLYKKRVTNQLLGR 4164
>gi|160420295 hypothetical protein LOC85459 [Homo sapiens]
Length = 2601
Score = 63.9 bits (154), Expect = 5e-10
Identities = 50/184 (27%), Positives = 93/184 (50%), Gaps = 14/184 (7%)
Query: 523 IKECKKSEDPTTPEPSPAAPSPAPRDGAGSPGLSEDCSE-----SQQTPARSL----TLQ 573
++E ++E + S P + + + P +SE E S +TP R +LQ
Sbjct: 2421 LEEKSENEAKCFFQVSEFLPLVSATEASDYPAVSELSIEKPRTASTETPRRLTPVPGSLQ 2480
Query: 574 EALEVRKPQFISRSQERLKKLEHMVQQRKAQRKEDLRQKQSLLPIRTSKKQFTIPHPLSD 633
EA RK F+ RS +R K++ + + + + + +++K S I +S + + +
Sbjct: 2481 EAFIKRKKSFMERSHQRQKEIRNKIHVSENSQIKTVKEKPS---ISSSVSRLKGVNKVRA 2537
Query: 634 NLFKPKERCISEKEMHMRSKRIYDNLPEVKKKKEEQRKRVILQSNRLRAEVFKKQLLDQL 693
+ P++R ++ H R R+Y+ L EVK++KEE+ K+ NR RA+ F K+ L++L
Sbjct: 2538 SF--PEDRKTTQALRHQRGLRLYNQLAEVKQQKEEKTKQEAYAQNRARAKEFHKKTLEKL 2595
Query: 694 LQRN 697
+N
Sbjct: 2596 RAKN 2599
>gi|33469974 activating transcription factor 4 [Homo sapiens]
Length = 351
Score = 42.4 bits (98), Expect = 0.001
Identities = 42/137 (30%), Positives = 61/137 (44%), Gaps = 17/137 (12%)
Query: 437 APPVEQ---KPTRHFLPIGDSSPSDDCLSRDLSEPTERRHQSFLKPRILFPGFLCPLQDV 493
AP V++ +P + PIG L L++P + +FL+P L PG L D
Sbjct: 124 APLVQETNKQPPQTVNPIGH-------LPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDH 176
Query: 494 CASLQEDNGVQIESKFPKGDYTCCDLVVKIKECKKSEDPTTPEPSPAAPSPAPRDGAGSP 553
SL+ + V I K DYT V I +C K ED TP + + +P GSP
Sbjct: 177 SFSLELGSEVDITEGDRKPDYTA--YVAMIPQCIKEED--TPSDNDSGICMSPESYLGSP 232
Query: 554 GLSEDCSESQQTPARSL 570
+ ++ +P RSL
Sbjct: 233 ---QHSPSTRGSPNRSL 246
>gi|33469976 activating transcription factor 4 [Homo sapiens]
Length = 351
Score = 42.4 bits (98), Expect = 0.001
Identities = 42/137 (30%), Positives = 61/137 (44%), Gaps = 17/137 (12%)
Query: 437 APPVEQ---KPTRHFLPIGDSSPSDDCLSRDLSEPTERRHQSFLKPRILFPGFLCPLQDV 493
AP V++ +P + PIG L L++P + +FL+P L PG L D
Sbjct: 124 APLVQETNKQPPQTVNPIGH-------LPESLTKPDQVAPFTFLQPLPLSPGVLSSTPDH 176
Query: 494 CASLQEDNGVQIESKFPKGDYTCCDLVVKIKECKKSEDPTTPEPSPAAPSPAPRDGAGSP 553
SL+ + V I K DYT V I +C K ED TP + + +P GSP
Sbjct: 177 SFSLELGSEVDITEGDRKPDYTA--YVAMIPQCIKEED--TPSDNDSGICMSPESYLGSP 232
Query: 554 GLSEDCSESQQTPARSL 570
+ ++ +P RSL
Sbjct: 233 ---QHSPSTRGSPNRSL 246
>gi|4505101 microtubule-associated protein 7 [Homo sapiens]
Length = 749
Score = 41.6 bits (96), Expect = 0.003
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Query: 520 VVKIKECKKSE-DPTTPEPSPAAPSPAPRDGAGSPGLSEDCSESQQTPA----------R 568
+VK++E E P PE PAAP+ AP + S TPA
Sbjct: 404 LVKVEEATVEERTPAEPEVGPAAPAMAPAPASAPAPASAPAPAPVPTPAMVSAPSSTVNA 463
Query: 569 SLTLQEALEVRKPQFISR---SQERLKKLEHMVQQRKAQRKEDL-RQKQSLLPIRTSKKQ 624
S +++ + P+ +R + RL + + ++R+ + +E+L RQK+ L R ++++
Sbjct: 464 SASVKTSAGTTDPEEATRLLAEKRRLAREQREKEERERREQEELERQKREELAQRVAEER 523
Query: 625 FTIPHPLSDNLFKPKERCISEKEMHMRSKRIYDNLPEVKK--KKEEQRKRVILQSNRLRA 682
T S L + R E+ +R E ++ +++E+ RV ++ R+R
Sbjct: 524 TTRREEESRRLEAEQAREKEEQLQRQAEERALREREEAERAQRQKEEEARVREEAERVRQ 583
Query: 683 E 683
E
Sbjct: 584 E 584
>gi|7657218 bromodomain-containing protein 4 isoform short [Homo
sapiens]
Length = 722
Score = 41.2 bits (95), Expect = 0.003
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 532 PTTPEPSPAAPSPAPRDGAGSPGLSEDCS--ESQQTPARSLT-LQEALEVRKPQFISRSQ 588
P P P+ P+ D + D S +S++ A+ L LQE L+ Q + SQ
Sbjct: 471 PAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAALSQ 530
Query: 589 ERLKKLEHMVQQRKAQRKEDLRQKQSLLPIRTSKKQFTIPHPLSDNLFKPKERCISEKE- 647
+ K + + +K ++KE ++K+ + + SK + P N +S+KE
Sbjct: 531 PQQNKPKKKEKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKN--NSSNSNVSKKEP 588
Query: 648 --MHMRSKRIYDNLPEVKKK--KEEQRKRVILQSNRLRAE 683
M + Y++ E K K E+++++ L N+L E
Sbjct: 589 APMKSKPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGE 628
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 41.2 bits (95), Expect = 0.003
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 532 PTTPEPSPAAPSPAPRDGAGSPGLSEDCS--ESQQTPARSLT-LQEALEVRKPQFISRSQ 588
P P P+ P+ D + D S +S++ A+ L LQE L+ Q + SQ
Sbjct: 471 PAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAALSQ 530
Query: 589 ERLKKLEHMVQQRKAQRKEDLRQKQSLLPIRTSKKQFTIPHPLSDNLFKPKERCISEKE- 647
+ K + + +K ++KE ++K+ + + SK + P N +S+KE
Sbjct: 531 PQQNKPKKKEKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKN--NSSNSNVSKKEP 588
Query: 648 --MHMRSKRIYDNLPEVKKK--KEEQRKRVILQSNRLRAE 683
M + Y++ E K K E+++++ L N+L E
Sbjct: 589 APMKSKPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGE 628
>gi|60593054 hypothetical protein LOC494514 [Homo sapiens]
Length = 123
Score = 40.0 bits (92), Expect = 0.007
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 62 KSRENRASLPLPCAIAQSRAHHAKQSLANRSGVNIHRAFALLPGRLGI--------PAPS 113
+SR + A LP A+ +RA H R LPGR+ + PA +
Sbjct: 19 RSRWDAAYLPAVAAVCVARASHVPNGTLRFGVCKARRTMRPLPGRIEVRTKRGPQRPA-A 77
Query: 114 DERGPEAELPPKEERPCGGPRRGFASITITARRV 147
ER P+ LPP GPRR + + A R+
Sbjct: 78 PERSPQPRLPPSRHPSRRGPRRHLSGCSAPACRI 111
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 39.3 bits (90), Expect = 0.013
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 38/209 (18%)
Query: 497 LQEDNGVQIESKFPKGDYTCCDLVVKIKECKKSEDPTTPEPSPAAPSPAPRDGAGSPGLS 556
++E+ QIE KF + D + K KE + +E+ A + A
Sbjct: 591 MKEEKKKQIEQKFAQID----EKTEKAKEERLAEEK------------AKKKAAAKKMEE 634
Query: 557 EDCSESQQTPARSLT-LQEALEVRKPQFI-----SRSQERLKKL---EHMVQQRKAQRKE 607
+ Q+ AR L LQ+ E R+ Q + QERL+K + + +QR+ +R+E
Sbjct: 635 VEARRKQEEEARRLRWLQQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERRE 694
Query: 608 DLRQKQSLLPI-------RTSKKQFTIPHPLSDNLFKPKERCISEKE--MHMRSKRIYDN 658
R++Q R ++Q + ER + E+E + ++ +++
Sbjct: 695 QERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRE 754
Query: 659 LPEVKKKKEEQRKRVILQSNRLRAEVFKK 687
L E KKK+E+QR L +L+ E KK
Sbjct: 755 LEEKKKKEEQQR----LAERQLQEEQEKK 779
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 39.3 bits (90), Expect = 0.013
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 38/209 (18%)
Query: 497 LQEDNGVQIESKFPKGDYTCCDLVVKIKECKKSEDPTTPEPSPAAPSPAPRDGAGSPGLS 556
++E+ QIE KF + D + K KE + +E+ A + A
Sbjct: 587 MKEEKKKQIEQKFAQID----EKTEKAKEERLAEEK------------AKKKAAAKKMEE 630
Query: 557 EDCSESQQTPARSLT-LQEALEVRKPQFI-----SRSQERLKKL---EHMVQQRKAQRKE 607
+ Q+ AR L LQ+ E R+ Q + QERL+K + + +QR+ +R+E
Sbjct: 631 VEARRKQEEEARRLRWLQQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERRE 690
Query: 608 DLRQKQSLLPI-------RTSKKQFTIPHPLSDNLFKPKERCISEKE--MHMRSKRIYDN 658
R++Q R ++Q + ER + E+E + ++ +++
Sbjct: 691 QERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRE 750
Query: 659 LPEVKKKKEEQRKRVILQSNRLRAEVFKK 687
L E KKK+E+QR L +L+ E KK
Sbjct: 751 LEEKKKKEEQQR----LAERQLQEEQEKK 775
>gi|62750349 histone deacetylase 5 isoform 3 [Homo sapiens]
Length = 1123
Score = 38.5 bits (88), Expect = 0.021
Identities = 32/168 (19%), Positives = 69/168 (41%), Gaps = 20/168 (11%)
Query: 532 PTTPEPSPAAPSPAPRD----GAGSP----------GLSEDCSESQQTPARSLTLQEALE 577
P T E P P P G GSP G + QQ L L++ +
Sbjct: 30 PVTVEVKPVLPRAMPSSMGGGGGGSPSPVELRGALVGSVDPTLREQQLQQELLALKQQQQ 89
Query: 578 VRKPQFISRSQERLKKLEHMVQQRKAQRKEDLRQKQSLLPIRTSKKQFTIPHPLSDNLFK 637
++K + Q K+ +H+ +Q + Q ++ L+Q+Q +L + ++ +
Sbjct: 90 LQKQLLFAEFQ---KQHDHLTRQHEVQLQKHLKQQQEMLAAKQQQEMLAAKRQQELEQQR 146
Query: 638 PKERCISEKEMHMRSKRIYDNLPEVKKKKEEQRKRVILQSNRLRAEVF 685
+E+ +++ + +R+ L ++ K++ + + +LR + F
Sbjct: 147 QREQ---QRQEELEKQRLEQQLLILRNKEKSKESAIASTEVKLRLQEF 191
>gi|62750347 histone deacetylase 5 isoform 1 [Homo sapiens]
Length = 1122
Score = 38.5 bits (88), Expect = 0.021
Identities = 32/168 (19%), Positives = 69/168 (41%), Gaps = 20/168 (11%)
Query: 532 PTTPEPSPAAPSPAPRD----GAGSP----------GLSEDCSESQQTPARSLTLQEALE 577
P T E P P P G GSP G + QQ L L++ +
Sbjct: 29 PVTVEVKPVLPRAMPSSMGGGGGGSPSPVELRGALVGSVDPTLREQQLQQELLALKQQQQ 88
Query: 578 VRKPQFISRSQERLKKLEHMVQQRKAQRKEDLRQKQSLLPIRTSKKQFTIPHPLSDNLFK 637
++K + Q K+ +H+ +Q + Q ++ L+Q+Q +L + ++ +
Sbjct: 89 LQKQLLFAEFQ---KQHDHLTRQHEVQLQKHLKQQQEMLAAKQQQEMLAAKRQQELEQQR 145
Query: 638 PKERCISEKEMHMRSKRIYDNLPEVKKKKEEQRKRVILQSNRLRAEVF 685
+E+ +++ + +R+ L ++ K++ + + +LR + F
Sbjct: 146 QREQ---QRQEELEKQRLEQQLLILRNKEKSKESAIASTEVKLRLQEF 190
>gi|15812226 transcriptional regulating factor 1 [Homo sapiens]
Length = 1200
Score = 38.1 bits (87), Expect = 0.028
Identities = 34/163 (20%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 527 KKSEDPTTPEPS-----PAAPSPAPRDGAGSPGLSEDCSESQ-------QTPARSLTLQE 574
K E P PS P P P G P L +Q Q P + +Q
Sbjct: 188 KPMEPPAPAIPSRYQQVPQQPHPGFTGGLSKPALQVGQHPTQGHLYYDYQQPLAQVPVQG 247
Query: 575 ALEVRKPQFISRSQERLKKLEHMVQQRKAQRKEDLRQKQSLLPIRTSKKQFTIPHPL-SD 633
++ PQ +S+ +++++ ++ Q++ Q + Q+ S+ I+T +Q P
Sbjct: 248 GQPLQAPQMLSQHMQQMQQHQYYPPQQQQQAGQ---QRISMQEIQTQPQQIRPSQPQPPP 304
Query: 634 NLFKPKERCISEKEMHMRSKRIYDNLPEVKKKKEEQRKRVILQ 676
+P++ + +++ M+ + Y P ++ +E+Q++++ LQ
Sbjct: 305 QQQQPQQLQLQQRQGSMQIPQYYQPQPMMQHLQEQQQQQMHLQ 347
>gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [Homo
sapiens]
Length = 756
Score = 37.4 bits (85), Expect = 0.048
Identities = 45/206 (21%), Positives = 84/206 (40%), Gaps = 17/206 (8%)
Query: 435 VSAPPVEQKPTRHFLPIGDSSPS-DDCLSRDLSEP-----TERRHQSFLKPRILFPGFLC 488
+ APP+++ P P+GD +P+ + L+ +LSE + + F L
Sbjct: 459 LEAPPMDKVPNPKMAPLGDEAPTLEKVLTPELSEEEVSTRDDIQFHHFSSEEALQKVKYF 518
Query: 489 PLQDVCASLQEDNGVQIESKFPKGDYTC-----CDLVVKIKECKKSEDPTTPEPSPAAPS 543
++ +S +E + + P C C LV +++E + P PA
Sbjct: 519 VAKEDPSSQEEAHTPEAPPPQPPSSERCLGEMKCTLVRGDSSPRQAELKSGPASRPALEK 578
Query: 544 PAPRDGAGSPGLSEDC-SESQQTPARSLTLQEALEVRKPQFISRSQERLKKLEHMVQQRK 602
P P + A + L E+ S ++TP E +R+ +E + E + + +
Sbjct: 579 PHPHEEATT--LPEEAPSNDERTPEEEAPPNEQRPLREEVL---PKEGVASKEEVTLKEE 633
Query: 603 AQRKEDLRQKQSLLPIRTSKKQFTIP 628
KE++ K+ + PI + Q T P
Sbjct: 634 LPPKEEVAPKEEVPPIERAFAQKTRP 659
Score = 31.2 bits (69), Expect = 3.4
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 111 APS-DERGPEAELPPKEERPCGG---PRRGFAS-ITITARRVGPP 150
APS DER PE E PP E+RP P+ G AS +T + PP
Sbjct: 592 APSNDERTPEEEAPPNEQRPLREEVLPKEGVASKEEVTLKEELPP 636
>gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [Homo
sapiens]
Length = 645
Score = 37.4 bits (85), Expect = 0.048
Identities = 45/206 (21%), Positives = 84/206 (40%), Gaps = 17/206 (8%)
Query: 435 VSAPPVEQKPTRHFLPIGDSSPS-DDCLSRDLSEP-----TERRHQSFLKPRILFPGFLC 488
+ APP+++ P P+GD +P+ + L+ +LSE + + F L
Sbjct: 348 LEAPPMDKVPNPKMAPLGDEAPTLEKVLTPELSEEEVSTRDDIQFHHFSSEEALQKVKYF 407
Query: 489 PLQDVCASLQEDNGVQIESKFPKGDYTC-----CDLVVKIKECKKSEDPTTPEPSPAAPS 543
++ +S +E + + P C C LV +++E + P PA
Sbjct: 408 VAKEDPSSQEEAHTPEAPPPQPPSSERCLGEMKCTLVRGDSSPRQAELKSGPASRPALEK 467
Query: 544 PAPRDGAGSPGLSEDC-SESQQTPARSLTLQEALEVRKPQFISRSQERLKKLEHMVQQRK 602
P P + A + L E+ S ++TP E +R+ +E + E + + +
Sbjct: 468 PHPHEEATT--LPEEAPSNDERTPEEEAPPNEQRPLREEVL---PKEGVASKEEVTLKEE 522
Query: 603 AQRKEDLRQKQSLLPIRTSKKQFTIP 628
KE++ K+ + PI + Q T P
Sbjct: 523 LPPKEEVAPKEEVPPIERAFAQKTRP 548
Score = 31.2 bits (69), Expect = 3.4
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 111 APS-DERGPEAELPPKEERPCGG---PRRGFAS-ITITARRVGPP 150
APS DER PE E PP E+RP P+ G AS +T + PP
Sbjct: 481 APSNDERTPEEEAPPNEQRPLREEVLPKEGVASKEEVTLKEELPP 525
>gi|4506467 radixin [Homo sapiens]
Length = 583
Score = 37.4 bits (85), Expect = 0.048
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 598 VQQRKAQRKEDLRQKQ-SLLPIRTSKKQFTIPHPLSDNLFKPKERCISEKEMHM-RSKRI 655
VQQ KAQ +E+ QKQ + KK+ I K KER EKE M R K+I
Sbjct: 302 VQQMKAQAREEKHQKQLERAQLENEKKKREIAE-------KEKERIEREKEELMERLKQI 354
Query: 656 YDNLPEVKKKKEEQ-RKRVILQSNRLRAE 683
+ + +K+ EEQ RK + L R RA+
Sbjct: 355 EEQTIKAQKELEEQTRKALELDQERKRAK 383
>gi|153791535 general control of amino acid synthesis 5-like 2 [Homo
sapiens]
Length = 837
Score = 37.4 bits (85), Expect = 0.048
Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 534 TPEPSPA-APSPAPRDGAGSPGLSEDCSESQQTPAR-SLTLQEALEVRKPQFISRSQERL 591
TP P+PA A +PA G G PG+ + S PAR L+ Q+ RK Q R R
Sbjct: 43 TPAPAPAPAAAPAGSTGTGGPGVGSGGAGSGGDPARPGLSQQQRASQRKAQV--RGLPRA 100
Query: 592 KKLEHM 597
KKLE +
Sbjct: 101 KKLEKL 106
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 37.4 bits (85), Expect = 0.048
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 571 TLQEALEVRKPQFISRSQERLKKLEHMVQQRKAQRKEDLRQKQSLLPIRTSKKQFTIPHP 630
T++EALEV+ Q +E L K +Q+ ++++++ L K+ K T
Sbjct: 1356 TIKEALEVKHDQLKEHIRETLAK----IQESQSKQEQSLNMKE--------KDNETTKIV 1403
Query: 631 LSDNLFKPKERCISEKEMHM--RSKRI---YDNLPEVKKKKEE-QRKRVILQS 677
FKPK+ + E+ M SKR+ +D + V K+K++ QR + +LQS
Sbjct: 1404 SEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEVLQS 1456
>gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]
Length = 1113
Score = 37.0 bits (84), Expect = 0.062
Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Query: 562 SQQTPARSLTLQEALEVRKPQFISRSQERLKKLEHMVQQRKAQRKEDLRQKQSLLPIRTS 621
++Q P + T E LE + ++ Q++ E +V Q++ +R+ LR++ P S
Sbjct: 675 AEQPPLKLDTSSEKLEFLQLFGLTTQQQK----EELVAQKRRKRRRMLRERSPSPPTIQS 730
Query: 622 KKQFTIPHPLSDNLFKPKERCISEKEMHMRSKRIYDNLPEVKKKKEEQRKRVILQSNRLR 681
K+Q P + P E S + NL + +K + ++R++ ++
Sbjct: 731 KRQTPSPRLALSTRYSPDEMNNSPNFEEKKKFLTIFNLTHISAEKRKDKERLVEMLRAMK 790
Query: 682 AEVFKKQLLDQL 693
+ + D L
Sbjct: 791 QKALSAAVADSL 802
>gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]
Length = 1217
Score = 37.0 bits (84), Expect = 0.062
Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Query: 562 SQQTPARSLTLQEALEVRKPQFISRSQERLKKLEHMVQQRKAQRKEDLRQKQSLLPIRTS 621
++Q P + T E LE + ++ Q++ E +V Q++ +R+ LR++ P S
Sbjct: 779 AEQPPLKLDTSSEKLEFLQLFGLTTQQQK----EELVAQKRRKRRRMLRERSPSPPTIQS 834
Query: 622 KKQFTIPHPLSDNLFKPKERCISEKEMHMRSKRIYDNLPEVKKKKEEQRKRVILQSNRLR 681
K+Q P + P E S + NL + +K + ++R++ ++
Sbjct: 835 KRQTPSPRLALSTRYSPDEMNNSPNFEEKKKFLTIFNLTHISAEKRKDKERLVEMLRAMK 894
Query: 682 AEVFKKQLLDQL 693
+ + D L
Sbjct: 895 QKALSAAVADSL 906
>gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens]
Length = 758
Score = 36.6 bits (83), Expect = 0.081
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 33/174 (18%)
Query: 537 PSPAAPSPAPRDGAGSPGLSEDCSESQQTPARSLTLQEALEVRKPQFISRSQERLKKLEH 596
PS +A S A SPG S+ + ++ +LQE L +R+ + + QE L K
Sbjct: 111 PSSSASSSA------SPGRSQSPRAAAAALSQQQSLQERLRLREER---KQQEELMKAFE 161
Query: 597 MVQQRKAQR--KEDLRQKQSLLPIRTSKKQF---TIPHPLSDN-----------LFKPKE 640
++++A+R K++ ++++ + ++ +P DN L K
Sbjct: 162 TPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGI 221
Query: 641 RCISEKEMHMRSKRIY-DNLPEVKKKKEEQRKRVILQSNRLRAEVFKKQLLDQL 693
+ EKE+ R+KRI DN E++K K+ L+ R R + ++Q L+ L
Sbjct: 222 SHLEEKELKERNKRIQEDNRLELQKVKQ-------LRLEREREKAMREQELEML 268
>gi|122937392 chromosome 19 open reading frame 29 [Homo sapiens]
Length = 758
Score = 36.6 bits (83), Expect = 0.081
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 33/174 (18%)
Query: 537 PSPAAPSPAPRDGAGSPGLSEDCSESQQTPARSLTLQEALEVRKPQFISRSQERLKKLEH 596
PS +A S A SPG S+ + ++ +LQE L +R+ + + QE L K
Sbjct: 111 PSSSASSSA------SPGRSQSPRAAAAALSQQQSLQERLRLREER---KQQEELMKAFE 161
Query: 597 MVQQRKAQR--KEDLRQKQSLLPIRTSKKQF---TIPHPLSDN-----------LFKPKE 640
++++A+R K++ ++++ + ++ +P DN L K
Sbjct: 162 TPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGI 221
Query: 641 RCISEKEMHMRSKRIY-DNLPEVKKKKEEQRKRVILQSNRLRAEVFKKQLLDQL 693
+ EKE+ R+KRI DN E++K K+ L+ R R + ++Q L+ L
Sbjct: 222 SHLEEKELKERNKRIQEDNRLELQKVKQ-------LRLEREREKAMREQELEML 268
>gi|153791662 coiled-coil domain containing 71 [Homo sapiens]
Length = 467
Score = 36.6 bits (83), Expect = 0.081
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 7/117 (5%)
Query: 71 PLPCAIAQSRAHHAKQSLANRSGVNIHRAFALLPG--RLGIPAPSDERGPEAELPPKEER 128
P+PC A+ +A + SLA+ S + + ++ PG R P + +GP+ +
Sbjct: 188 PMPCLGAKHKAQSLQLSLAD-SPLKLRKSSGKGPGNPRPKAPRKTTSKGPKCLT---RKG 243
Query: 129 PCGGPRRGFASITITARRVGPPA-RALVWGTAGDSLCPKCRAEDTLFQAPPALANGA 184
P GPRRG + T R G P+ R + G+A + + + TL +A A A A
Sbjct: 244 PGAGPRRGSGHQSKTNRATGSPSVRRMKGGSALGTKTAQAKVARTLAKAARAQAKVA 300
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 36.2 bits (82), Expect = 0.11
Identities = 35/168 (20%), Positives = 74/168 (44%), Gaps = 11/168 (6%)
Query: 525 ECKKSEDPTTPEPSPAAPSPAPRDGAGSPGLSEDCSESQQTPARSLTLQEALEVRKPQFI 584
E ++ E+P SP P+ + GA + +E + R L LQ+ + +PQ
Sbjct: 50 ESQEEEEPQERNSSPQRPAVSAPVGAS------EIAEETRPGQRELQLQQLEQQPEPQQQ 103
Query: 585 SRSQERLKKLEHMVQQRKAQRKEDLRQKQSLLPIRTSKKQFTIPHPLSDNLFKPKERCIS 644
+ ++ + H+ Q++ Q+ +Q L ++ K Q L L ++
Sbjct: 104 PQHEQLQQPQPHLELQQQPQQD----GQQQLSQLQQEKHQSVHHQELKPELQLMHQQQQL 159
Query: 645 EKEMHMRSKRIYDNLPEVKKKKEEQRKRVILQSNRLRAEVFKKQLLDQ 692
+ + +R+ E + ++ Q ++V+ Q +L+ +V ++QLL Q
Sbjct: 160 QPQQVQEQQRLQQQ-QEQLQTQQAQEQQVLQQQEQLQQQVQEQQLLQQ 206
Score = 32.3 bits (72), Expect = 1.5
Identities = 30/143 (20%), Positives = 73/143 (51%), Gaps = 23/143 (16%)
Query: 560 SESQQTPARSLTLQEALEVRKPQFISRSQERLKKL------EHMVQQRKAQRKEDLRQKQ 613
++ QQ + LQ+ +V++ Q + + QE+L++ E + QQ+ Q++E L+Q+Q
Sbjct: 182 AQEQQVLQQQEQLQQ--QVQEQQLLQQQQEQLQQQQLLQQQEQLQQQQFQQQQEQLQQQQ 239
Query: 614 SLLPIRTSKKQFTIPHPLSDNLFKPKERCISEKEMHMRSKRIYDN-LPEVKKKKEEQRKR 672
LL ++ + L L + ++ + ++ + + ++ L + +++ ++Q+++
Sbjct: 240 QLLLLQQQGQ-------LQQQLLQQQQAQLQQQLLEQQQAQLQQQLLLQQQEQLQQQQQQ 292
Query: 673 VILQSNRLRAEVFKKQLLDQLLQ 695
+LQ ++QL Q LQ
Sbjct: 293 QLLQQQ-------QEQLQQQQLQ 308
>gi|4503509 eukaryotic translation initiation factor 3, subunit 10
theta, 150/170kDa [Homo sapiens]
Length = 1382
Score = 36.2 bits (82), Expect = 0.11
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 12/134 (8%)
Query: 564 QTPARSLTLQEALEVRKPQFISRSQERLKKL-----------EHMVQQRKAQRKEDLRQK 612
Q A S L +ALEV KP I + +E +L EH + Q E+ +++
Sbjct: 522 QLTAMSSVLAKALEVIKPAHILQEKEEQHQLAVTAYLKNSRKEHQRILARRQTIEERKER 581
Query: 613 QSLLPIRTSKKQFTIPHPLSDNLFKPKERCISEKEMHMRSKRIYDNLPEVKKKKEEQRKR 672
L I+ K++ + K +E + ++ +RI ++KKK +R
Sbjct: 582 LESLNIQREKEELEQREAELQKVRKAEEERLRQEAKEREKERILQEHEQIKKKTVRERLE 641
Query: 673 VILQSNRLRAEVFK 686
I + L A+ FK
Sbjct: 642 QI-KKTELGAKAFK 654
Score = 32.3 bits (72), Expect = 1.5
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
Query: 573 QEALEVRKPQFISR-SQERLKKLEHMVQQRKAQRKEDLRQKQSLLPIRTSKKQFTIPHPL 631
Q E + QF R ++ER +LE +QRK +R+ +++ R +++Q
Sbjct: 769 QSVYEEKLKQFEERLAEERHNRLEERKRQRKEERRITYYREKEEEEQRRAEEQMLKEREE 828
Query: 632 SDNLFKPKERCISEKEMHMRSKRIYDNLPEVKKKKEEQRKRVILQSNRLRAEVFKKQLLD 691
+ ER E+E+ +R+ L EV++KK QR+ I + R R E +++L D
Sbjct: 829 RER----AERAKREEELREYQERV-KKLEEVERKK-RQRELEIEERERRREE--ERRLGD 880
Query: 692 QLLQR 696
L R
Sbjct: 881 SSLSR 885
>gi|157311604 phosphodiesterase 4D interacting protein isoform 1 [Homo
sapiens]
Length = 2346
Score = 36.2 bits (82), Expect = 0.11
Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 31/140 (22%)
Query: 558 DCSESQQTPARSLTLQEALEVRKPQFISRSQERLKKLEHMVQQRKAQRKEDLRQ------ 611
+ SE +T L + L R + + RS ERL +LE + A +D
Sbjct: 895 ESSERDRTLQVELEGAQVLRSRLEEVLGRSLERLNRLETLAAIGGAAAGDDTEDTSTEFT 954
Query: 612 --------------------KQSLLPIRTSKKQFTIPHPLSDNLFKPKERCISEKEMHMR 651
++SL + T F+ P P+ + RC+ E+ +H+R
Sbjct: 955 DSIEEEAAHHSHQQLVKVALEKSLATVETQNPSFSPPSPMGGD----SNRCLQEEMLHLR 1010
Query: 652 SKRIYDNLPEVKKKKEEQRK 671
++ + +L E +K +EE ++
Sbjct: 1011 AE-FHQHLEEKRKAEEELKE 1029
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 36.2 bits (82), Expect = 0.11
Identities = 41/193 (21%), Positives = 68/193 (35%), Gaps = 6/193 (3%)
Query: 496 SLQEDNGVQIESKFPKGDYTCCDLVVKIKECKKSEDPTTPEPSPAAPSPAPRDGAGSPGL 555
S Q + + +K P Y D + KK + T P PSP S P A +P L
Sbjct: 317 STQRPSSPETATKQPSSPYEDKD------KDKKEKSATRPSPSPERSSTGPEPPAPTPLL 370
Query: 556 SEDCSESQQTPARSLTLQEALEVRKPQFISRSQERLKKLEHMVQQRKAQRKEDLRQKQSL 615
+E S Q A + QE + +R + K E + Q ++ Q +
Sbjct: 371 AERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKV 430
Query: 616 LPIRTSKKQFTIPHPLSDNLFKPKERCISEKEMHMRSKRIYDNLPEVKKKKEEQRKRVIL 675
+S + P P + + S+ H R+KR + ++ R
Sbjct: 431 SRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATA 490
Query: 676 QSNRLRAEVFKKQ 688
+ R R+ K+
Sbjct: 491 KRGRSRSRTPTKR 503
>gi|225579095 S-phase cyclin A-associated protein in the ER isoform
b [Homo sapiens]
Length = 1154
Score = 35.8 bits (81), Expect = 0.14
Identities = 48/211 (22%), Positives = 84/211 (39%), Gaps = 41/211 (19%)
Query: 496 SLQEDNGVQIESKFPKGDYTCCDL------VVKIKECKKSEDPTTP-----EPSPAAPSP 544
+++ DN + G + C + V+ E ++S T E PA P
Sbjct: 217 NIETDNDSDFSASMGSGSVSFCGMSMDWNDVLADYEARESWRQNTSWGDIVEEEPARP-- 274
Query: 545 APRDGAGSPGLSEDCSESQQTPARSLTLQEALEVRKPQFISRSQERLKKLEHMVQQRKAQ 604
PG E +P+R T+ E+ K +H +Q KAQ
Sbjct: 275 --------PGHGIHMHEKLSSPSRKRTIAES-----------------KKKHEEKQMKAQ 309
Query: 605 R-KEDLRQKQSLLPIRTSKKQFTIPHPLSDNLFKPKERCISEKEMHMRSKRIYDNLPEVK 663
+ +E LR++++L + +++ + + L + R + EK +H KR VK
Sbjct: 310 QLREKLREEKTLKLQKLLEREKDV-RKWKEELLDQRRRMMEEKLLHAEFKREVQLQAIVK 368
Query: 664 KKKEEQRK-RVILQSNRLRAEVFKKQLLDQL 693
K +EE+ K I N L A+ + +L +L
Sbjct: 369 KAQEEEAKVNEIAFINTLEAQNKRHDVLSKL 399
>gi|161702986 ezrin [Homo sapiens]
Length = 586
Score = 35.8 bits (81), Expect = 0.14
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 17/113 (15%)
Query: 598 VQQRKAQRKEDLRQKQSLLPIRTSKKQFTIPHPLSDNLFKPKERCISEKEMHMRSKRIYD 657
VQQ KAQ +E+ QKQ ++Q + + + KE+ + EKE M + Y+
Sbjct: 302 VQQMKAQAREEKHQKQ------LERQQLETEKKRRETVEREKEQMMREKEELMLRLQDYE 355
Query: 658 NLPEVKKKK-----------EEQRKRVILQSNRLRAEVFKKQLLDQLLQRNAV 699
+ +++ EE+RKR ++ RL A+ + L+R AV
Sbjct: 356 EKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAV 408
Score = 31.2 bits (69), Expect = 3.4
Identities = 29/125 (23%), Positives = 70/125 (56%), Gaps = 16/125 (12%)
Query: 574 EALEVRKPQFISRSQERLKKLEHMVQQRKAQRKEDL-RQKQSLLPIRTSKKQFTIPHPLS 632
+ +EV++ + +R ++ K+LE + + +R+E + R+K+ ++ +++ + L
Sbjct: 298 DTIEVQQMKAQAREEKHQKQLERQQLETEKKRRETVEREKEQMM-----REKEELMLRLQ 352
Query: 633 DNLFKPKERCISEKEMHMRSKRIYDNLPEVKKKKEEQRKRVILQSNRLRA----EVFKKQ 688
D K K+ +E+E+ + +R L E +K+ +E+ +R L+++R+ A E ++Q
Sbjct: 353 DYEEKTKK---AERELSEQIQRAL-QLEEERKRAQEEAER--LEADRMAALRAKEELERQ 406
Query: 689 LLDQL 693
+DQ+
Sbjct: 407 AVDQI 411
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,719,901
Number of Sequences: 37866
Number of extensions: 1685315
Number of successful extensions: 11488
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 263
Number of HSP's that attempted gapping in prelim test: 10827
Number of HSP's gapped (non-prelim): 984
length of query: 699
length of database: 18,247,518
effective HSP length: 109
effective length of query: 590
effective length of database: 14,120,124
effective search space: 8330873160
effective search space used: 8330873160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.