Guide to the Human Genome
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Name: NOMO3 Sequence: fasta or formatted (1222aa) NCBI GI: 51944969
Description:

nodal modulator 3

Referenced in:

TGF-beta Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         61           2
 C cysteine            1.4         17           1
 D aspartate           5.0         61           2
 E glutamate           6.5         79           2
 F phenylalanine       4.6         56           2
 G glycine             8.6        105           2
 H histidine           2.0         25           2
 I isoleucine          5.1         62           2
 K lysine              5.6         68           2
 L leucine             9.7        118           3
 M methionine          1.6         19           2
 N asparagine          3.7         45           2
 P proline             5.5         67           2
 Q glutamine           4.3         53           2
 R arginine            3.5         43           2
 S serine              7.9         96           2
 T threonine           7.0         86           2
 V valine              9.0        110           2
 W tryptophan          0.5          6           1
 Y tyrosine            3.7         45           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nodal modulator 3 
NOMO2                 0.997   nodal modulator 2 isoform 2 
NOMO2                 0.997   nodal modulator 2 isoform 1 
NOMO1                 0.996   nodal modulator 1 
TCHH                  0.003   trichohyalin 
ECM2                  0.003   extracellular matrix protein 2 precursor 
NARG1                 0.003   NMDA receptor regulated 1 
HDAC5                 0.003   histone deacetylase 5 isoform 3 
HDAC5                 0.003   histone deacetylase 5 isoform 1 
RP1L1                 0.003   retinitis pigmentosa 1-like 1 
LOC100290717          0.003   PREDICTED: hypothetical protein XP_002347797 
NUDT18                0.003   nudix (nucleoside diphosphate linked moiety X)-type...
GPR179                0.003   GPR158-like 1 
FLNA                  0.003   filamin A, alpha isoform 2 
FLNA                  0.003   filamin A, alpha isoform 1 
TNC                   0.003   tenascin C precursor 
CHD4                  0.002   chromodomain helicase DNA binding protein 4 
SFRS17A               0.002   DNA segment on chromosome X and Y (unique) 155 expre...
C2orf16               0.002   hypothetical protein LOC84226 
FAM76A                0.002   hypothetical protein LOC199870 isoform 1 
FAM76A                0.002   hypothetical protein LOC199870 isoform 3 
EXPH5                 0.002   exophilin 5 isoform c 
EXPH5                 0.002   exophilin 5 isoform b 
MLLT4                 0.002   myeloid/lymphoid or mixed-lineage leukemia (trithora...
EXPH5                 0.002   exophilin 5 isoform a 
USP8                  0.002   ubiquitin specific peptidase 8 
USP8                  0.002   ubiquitin specific peptidase 8 
USP8                  0.002   ubiquitin specific peptidase 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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