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Search of human proteins with 5174729
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5174729 TSC22 domain family, member 1 isoform 2 [Homo
sapiens]
(144 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5174729 TSC22 domain family, member 1 isoform 2 [Homo sapiens] 281 1e-76
gi|171460948 TSC22 domain family, member 1 isoform 1 [Homo sapiens] 202 1e-52
gi|37622901 TSC22 domain family, member 3 isoform 2 [Homo sapiens] 162 7e-41
gi|37622903 TSC22 domain family, member 3 isoform 1 [Homo sapiens] 125 1e-29
gi|7662236 TSC22 domain family, member 2 [Homo sapiens] 120 3e-28
gi|13569901 TSC22 domain family, member 4 [Homo sapiens] 108 1e-24
gi|62865625 TSC22 domain family, member 3 isoform 3 [Homo sapiens] 97 6e-21
gi|31657117 SMEK homolog 1, suppressor of mek1 [Homo sapiens] 35 0.022
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 34 0.048
gi|33946313 ninein isoform 4 [Homo sapiens] 34 0.048
gi|33946321 ninein isoform 5 [Homo sapiens] 34 0.048
gi|148536871 ninein isoform 1 [Homo sapiens] 34 0.048
gi|148536869 ninein isoform 2 [Homo sapiens] 34 0.048
gi|38788260 bromodomain PHD finger transcription factor isoform ... 33 0.063
gi|38788274 bromodomain PHD finger transcription factor isoform ... 33 0.063
gi|55749708 outer dense fiber of sperm tails 2-like isoform b [H... 33 0.063
gi|55749696 outer dense fiber of sperm tails 2-like isoform a [H... 33 0.063
gi|57242777 c-myc binding protein [Homo sapiens] 33 0.083
gi|150170670 piccolo isoform 2 [Homo sapiens] 33 0.11
gi|150378539 piccolo isoform 1 [Homo sapiens] 33 0.11
gi|125628636 keratin 80 isoform a [Homo sapiens] 32 0.14
gi|125628632 keratin 80 isoform b [Homo sapiens] 32 0.14
gi|223941798 N-glycanase 1 isoform 2 [Homo sapiens] 32 0.18
gi|21314690 N-glycanase 1 isoform 1 [Homo sapiens] 32 0.18
gi|238859655 tetratricopeptide repeat domain 31 [Homo sapiens] 32 0.18
gi|223941808 N-glycanase 1 isoform 4 [Homo sapiens] 32 0.18
gi|223941803 N-glycanase 1 isoform 3 [Homo sapiens] 32 0.18
gi|10835242 protein kinase, cGMP-dependent, type I isoform 2 [Ho... 31 0.31
gi|6912240 adaptor-related protein complex 3, mu 1 subunit [Homo... 31 0.31
gi|46370095 adaptor-related protein complex 3, mu 1 subunit [Hom... 31 0.31
>gi|5174729 TSC22 domain family, member 1 isoform 2 [Homo sapiens]
Length = 144
Score = 281 bits (719), Expect = 1e-76
Identities = 144/144 (100%), Positives = 144/144 (100%)
Query: 1 MKSQWCRPVAMDLGVYQLRHFSISFLSSLLGTENASVRLDNSSSGASVVAIDNKIEQAMD 60
MKSQWCRPVAMDLGVYQLRHFSISFLSSLLGTENASVRLDNSSSGASVVAIDNKIEQAMD
Sbjct: 1 MKSQWCRPVAMDLGVYQLRHFSISFLSSLLGTENASVRLDNSSSGASVVAIDNKIEQAMD 60
Query: 61 LVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPEQLAQFQAQLQTGSPP 120
LVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPEQLAQFQAQLQTGSPP
Sbjct: 61 LVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPEQLAQFQAQLQTGSPP 120
Query: 121 ATTQPQGTTQPPAQPASQGSGPTA 144
ATTQPQGTTQPPAQPASQGSGPTA
Sbjct: 121 ATTQPQGTTQPPAQPASQGSGPTA 144
>gi|171460948 TSC22 domain family, member 1 isoform 1 [Homo sapiens]
Length = 1073
Score = 202 bits (513), Expect = 1e-52
Identities = 104/105 (99%), Positives = 104/105 (99%)
Query: 40 DNSSSGASVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLK 99
D SSSGASVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLK
Sbjct: 969 DESSSGASVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLK 1028
Query: 100 TLASPEQLAQFQAQLQTGSPPATTQPQGTTQPPAQPASQGSGPTA 144
TLASPEQLAQFQAQLQTGSPPATTQPQGTTQPPAQPASQGSGPTA
Sbjct: 1029 TLASPEQLAQFQAQLQTGSPPATTQPQGTTQPPAQPASQGSGPTA 1073
>gi|37622901 TSC22 domain family, member 3 isoform 2 [Homo sapiens]
Length = 134
Score = 162 bits (411), Expect = 7e-41
Identities = 87/121 (71%), Positives = 101/121 (83%), Gaps = 1/121 (0%)
Query: 11 MDLGVYQLRHFSISFLSSLLGTENASVRLDNSSSGASVVAIDNKIEQAMDLVKSHLMYAV 70
M++ VYQL +FSISF SSLLG + SV+LDNS+SGASVVAIDNKIEQAMDLVK+HLMYAV
Sbjct: 10 MEVAVYQLHNFSISFFSSLLGGDVVSVKLDNSASGASVVAIDNKIEQAMDLVKNHLMYAV 69
Query: 71 REEVEVLKEQIKELIEKNSQLEQENNLLKTLASPEQLAQFQAQLQTGSPPATTQPQGTTQ 130
REEVE+LKEQI+EL+EKNSQLE+EN LLKTLASPEQL +FQ+ L + PA PQ
Sbjct: 70 REEVEILKEQIRELVEKNSQLERENTLLKTLASPEQLEKFQSCL-SPEEPAPESPQVPEA 128
Query: 131 P 131
P
Sbjct: 129 P 129
>gi|37622903 TSC22 domain family, member 3 isoform 1 [Homo sapiens]
Length = 200
Score = 125 bits (314), Expect = 1e-29
Identities = 67/91 (73%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
Query: 41 NSSSGASVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKT 100
+S+SGASVVAIDNKIEQAMDLVK+HLMYAVREEVE+LKEQI+EL+EKNSQLE+EN LLKT
Sbjct: 106 HSASGASVVAIDNKIEQAMDLVKNHLMYAVREEVEILKEQIRELVEKNSQLERENTLLKT 165
Query: 101 LASPEQLAQFQAQLQTGSPPATTQPQGTTQP 131
LASPEQL +FQ+ L + PA PQ P
Sbjct: 166 LASPEQLEKFQSCL-SPEEPAPESPQVPEAP 195
>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
Length = 780
Score = 120 bits (302), Expect = 3e-28
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 9/113 (7%)
Query: 30 LGTENASVRLDNSSSGASVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELIEKNS 89
L T S L +S+SG VVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKEL+E+NS
Sbjct: 665 LNTLKESKSLWDSASGGGVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELVERNS 724
Query: 90 QLEQENNLLKTLASPEQLAQFQAQLQTGSPPATTQPQGT-------TQPPAQP 135
LE+EN LLK+L+S +QL+Q Q +P +T+Q Q TQPP QP
Sbjct: 725 LLERENALLKSLSSNDQLSQLPT--QQANPGSTSQQQAVIAQPPQPTQPPQQP 775
>gi|13569901 TSC22 domain family, member 4 [Homo sapiens]
Length = 395
Score = 108 bits (271), Expect = 1e-24
Identities = 58/87 (66%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Query: 40 DNSSSGASVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLK 99
D+ S S+V IDNKIEQAMDLVKSHLM+AVREEVEVLKEQI+EL E+N+ LEQEN LL+
Sbjct: 307 DDDSGSGSLVGIDNKIEQAMDLVKSHLMFAVREEVEVLKEQIRELAERNAALEQENGLLR 366
Query: 100 TLASPEQLAQFQAQ-LQTGSPPATTQP 125
LASPEQLAQ + + PPA P
Sbjct: 367 ALASPEQLAQLPSSGVPRLGPPAPNGP 393
>gi|62865625 TSC22 domain family, member 3 isoform 3 [Homo sapiens]
Length = 77
Score = 96.7 bits (239), Expect = 6e-21
Identities = 51/73 (69%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Query: 59 MDLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPEQLAQFQAQLQTGS 118
MDLVK+HLMYAVREEVE+LKEQI+EL+EKNSQLE+EN LLKTLASPEQL +FQ+ L +
Sbjct: 1 MDLVKNHLMYAVREEVEILKEQIRELVEKNSQLERENTLLKTLASPEQLEKFQSCL-SPE 59
Query: 119 PPATTQPQGTTQP 131
PA PQ P
Sbjct: 60 EPAPESPQVPEAP 72
>gi|31657117 SMEK homolog 1, suppressor of mek1 [Homo sapiens]
Length = 820
Score = 35.0 bits (79), Expect = 0.022
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 14/101 (13%)
Query: 40 DNSSSGASVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLK 99
D+ G +VV+ +K + D++ + R++ LKE E++ LLK
Sbjct: 675 DDMEDGEAVVSPSDKTKNDDDIMDPISKFMERKK---LKES-----------EEKEVLLK 720
Query: 100 TLASPEQLAQFQAQLQTGSPPATTQPQGTTQPPAQPASQGS 140
T S Q F+ L +G+ T TT P P S GS
Sbjct: 721 TNLSGRQSPSFKLSLSSGTKTNLTSQSSTTNLPGSPGSPGS 761
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 33.9 bits (76), Expect = 0.048
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 17/100 (17%)
Query: 20 HFSISFLS--SLLGTENASVRLDNSS-SGASVVAIDNKIEQAMDLVKSHLMYAVREEVEV 76
H S SFL+ SL G A+ + + SG ++ I + ++ EE++
Sbjct: 1015 HVSGSFLTHRSLSGCPRATSAMKKAKLSGEQMLTIKQRASNGIEN---------DEEIKQ 1065
Query: 77 LKEQIKELIEKNSQLEQENNLLKTLASPEQLAQFQAQLQT 116
L E+IKEL E NSQ+E + L+T Q+ ++ L+T
Sbjct: 1066 LDEEIKELNESNSQMEADMIKLRT-----QITTMESNLKT 1100
>gi|33946313 ninein isoform 4 [Homo sapiens]
Length = 2096
Score = 33.9 bits (76), Expect = 0.048
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 27 SSLLGTENASVRLDNSSSGASVVAIDNKIE---QAMDLVKSHLMYAVREEVEVLKEQIKE 83
+S+L E ++ ++S S + ++ E Q + VK AV++ VE LK+QI E
Sbjct: 1529 NSILRNEITTLNEEDSISNLKLGTLNGSQEEMWQKTETVKQENA-AVQKMVENLKKQISE 1587
Query: 84 LIEKNSQLEQENNLL--KTLASPEQLAQFQAQL 114
L KN QL+ EN L K + E+L + +L
Sbjct: 1588 LKIKNQQLDLENTELSQKNSQNQEKLQELNQRL 1620
>gi|33946321 ninein isoform 5 [Homo sapiens]
Length = 2090
Score = 33.9 bits (76), Expect = 0.048
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 27 SSLLGTENASVRLDNSSSGASVVAIDNKIE---QAMDLVKSHLMYAVREEVEVLKEQIKE 83
+S+L E ++ ++S S + ++ E Q + VK AV++ VE LK+QI E
Sbjct: 1523 NSILRNEITTLNEEDSISNLKLGTLNGSQEEMWQKTETVKQENA-AVQKMVENLKKQISE 1581
Query: 84 LIEKNSQLEQENNLL--KTLASPEQLAQFQAQL 114
L KN QL+ EN L K + E+L + +L
Sbjct: 1582 LKIKNQQLDLENTELSQKNSQNQEKLQELNQRL 1614
>gi|148536871 ninein isoform 1 [Homo sapiens]
Length = 2046
Score = 33.9 bits (76), Expect = 0.048
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 27 SSLLGTENASVRLDNSSSGASVVAIDNKIE---QAMDLVKSHLMYAVREEVEVLKEQIKE 83
+S+L E ++ ++S S + ++ E Q + VK AV++ VE LK+QI E
Sbjct: 1523 NSILRNEITTLNEEDSISNLKLGTLNGSQEEMWQKTETVKQENA-AVQKMVENLKKQISE 1581
Query: 84 LIEKNSQLEQENNLL--KTLASPEQLAQFQAQL 114
L KN QL+ EN L K + E+L + +L
Sbjct: 1582 LKIKNQQLDLENTELSQKNSQNQEKLQELNQRL 1614
>gi|148536869 ninein isoform 2 [Homo sapiens]
Length = 2133
Score = 33.9 bits (76), Expect = 0.048
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 27 SSLLGTENASVRLDNSSSGASVVAIDNKIE---QAMDLVKSHLMYAVREEVEVLKEQIKE 83
+S+L E ++ ++S S + ++ E Q + VK AV++ VE LK+QI E
Sbjct: 1523 NSILRNEITTLNEEDSISNLKLGTLNGSQEEMWQKTETVKQENA-AVQKMVENLKKQISE 1581
Query: 84 LIEKNSQLEQENNLL--KTLASPEQLAQFQAQL 114
L KN QL+ EN L K + E+L + +L
Sbjct: 1582 LKIKNQQLDLENTELSQKNSQNQEKLQELNQRL 1614
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 33.5 bits (75), Expect = 0.063
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 79 EQIKELIEKNSQLEQENNLLKTLASPEQLAQFQAQLQTGSPPATTQPQGTTQPPAQPASQ 138
EQ + + Q+ Q+ L +S + +AQ QT P A QPQ Q PAQP Q
Sbjct: 2363 EQRQSKLSPQMQVHQDKTLPPAQSS--SVGPAEAQPQTAQPSAQPQPQTQPQSPAQPEVQ 2420
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 33.5 bits (75), Expect = 0.063
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 79 EQIKELIEKNSQLEQENNLLKTLASPEQLAQFQAQLQTGSPPATTQPQGTTQPPAQPASQ 138
EQ + + Q+ Q+ L +S + +AQ QT P A QPQ Q PAQP Q
Sbjct: 2237 EQRQSKLSPQMQVHQDKTLPPAQSS--SVGPAEAQPQTAQPSAQPQPQTQPQSPAQPEVQ 2294
>gi|55749708 outer dense fiber of sperm tails 2-like isoform b [Homo
sapiens]
Length = 513
Score = 33.5 bits (75), Expect = 0.063
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 22 SISFLSSLLGTENASVRLDNSSSGASVVAIDNKIEQAMDLVKSHL----MY-----AVRE 72
SI + + L EN ++ ++ VV+++N++ + ++ K MY ++E
Sbjct: 205 SIEYENETLNLENTKLKTTLAALKDEVVSVENELSELQEVEKKQKTLIEMYKTQVQKLQE 264
Query: 73 EVEVLKEQIKELIEKNSQLEQENN 96
E++K + + L+ KN+Q+ + N
Sbjct: 265 AAEIVKSRCENLLHKNNQITKTKN 288
>gi|55749696 outer dense fiber of sperm tails 2-like isoform a [Homo
sapiens]
Length = 644
Score = 33.5 bits (75), Expect = 0.063
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 22 SISFLSSLLGTENASVRLDNSSSGASVVAIDNKIEQAMDLVKSHL----MY-----AVRE 72
SI + + L EN ++ ++ VV+++N++ + ++ K MY ++E
Sbjct: 336 SIEYENETLNLENTKLKTTLAALKDEVVSVENELSELQEVEKKQKTLIEMYKTQVQKLQE 395
Query: 73 EVEVLKEQIKELIEKNSQLEQENN 96
E++K + + L+ KN+Q+ + N
Sbjct: 396 AAEIVKSRCENLLHKNNQITKTKN 419
>gi|57242777 c-myc binding protein [Homo sapiens]
Length = 103
Score = 33.1 bits (74), Expect = 0.083
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Query: 54 KIEQAMDLVKSHLMYAVRE--EVEVLKEQIKELIEKNSQLEQENNLLKTLASPEQLAQFQ 111
K A+D +K HL A E E+E+L+ ++ E+ EK + +EN LK +LAQ++
Sbjct: 40 KPNSALDFLKHHLGAATPENPEIELLRLELAEMKEKYEAIVEENKKLKA-----KLAQYE 94
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 32.7 bits (73), Expect = 0.11
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 99 KTLASPEQLAQFQAQLQTGSPPATTQPQGTTQPPAQPASQGSGP 142
K A P L + AQ Q G+ QP GTT+PPAQP P
Sbjct: 330 KPPAQPSGLTKPLAQ-QPGTVKPPVQPPGTTKPPAQPLGPAKPP 372
Score = 27.3 bits (59), Expect = 4.5
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 70 VREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPEQLAQFQAQL---QTGSPPATTQPQ 126
+REE E+LKEQ EK ++EQ+ + S + + +AQ + +PP+ P
Sbjct: 1779 LREEEELLKEQ-----EKQREIEQQQRKSSSKKSKKDKDELRAQRRRERPKTPPSNLSPI 1833
Query: 127 GTTQP 131
P
Sbjct: 1834 EDASP 1838
Score = 27.3 bits (59), Expect = 4.5
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 49 VAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKE-LIEKNSQLEQENNLLKTLASP-EQ 106
+ + K+E+ + K HL++ EE + +E L ++ QLEQ L + L E+
Sbjct: 3251 IMVQKKLEELQSM-KQHLLFQQEEERQAQFMMRQETLAQQQLQLEQIQQLQQQLHQQLEE 3309
Query: 107 LAQFQAQLQTGSPPATTQPQGTTQ 130
Q P T PQ TT+
Sbjct: 3310 QKIRQIYQYNYDPSGTASPQTTTE 3333
Score = 26.9 bits (58), Expect = 5.9
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 10/36 (27%)
Query: 119 PPATT----QPQGTTQPPAQ------PASQGSGPTA 144
PP TT QP G +PPAQ P+S+ GP A
Sbjct: 355 PPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKA 390
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 32.7 bits (73), Expect = 0.11
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 99 KTLASPEQLAQFQAQLQTGSPPATTQPQGTTQPPAQPASQGSGP 142
K A P L + AQ Q G+ QP GTT+PPAQP P
Sbjct: 330 KPPAQPSGLTKPLAQ-QPGTVKPPVQPPGTTKPPAQPLGPAKPP 372
Score = 27.3 bits (59), Expect = 4.5
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 70 VREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPEQLAQFQAQL---QTGSPPATTQPQ 126
+REE E+LKEQ EK ++EQ+ + S + + +AQ + +PP+ P
Sbjct: 1779 LREEEELLKEQ-----EKQREIEQQQRKSSSKKSKKDKDELRAQRRRERPKTPPSNLSPI 1833
Query: 127 GTTQP 131
P
Sbjct: 1834 EDASP 1838
Score = 27.3 bits (59), Expect = 4.5
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 49 VAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKE-LIEKNSQLEQENNLLKTLASP-EQ 106
+ + K+E+ + K HL++ EE + +E L ++ QLEQ L + L E+
Sbjct: 3251 IMVQKKLEELQSM-KQHLLFQQEEERQAQFMMRQETLAQQQLQLEQIQQLQQQLHQQLEE 3309
Query: 107 LAQFQAQLQTGSPPATTQPQGTTQ 130
Q P T PQ TT+
Sbjct: 3310 QKIRQIYQYNYDPSGTASPQTTTE 3333
Score = 26.9 bits (58), Expect = 5.9
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 10/36 (27%)
Query: 119 PPATT----QPQGTTQPPAQ------PASQGSGPTA 144
PP TT QP G +PPAQ P+S+ GP A
Sbjct: 355 PPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKA 390
>gi|125628636 keratin 80 isoform a [Homo sapiens]
Length = 452
Score = 32.3 bits (72), Expect = 0.14
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 28 SLLGTENASVRLDNSSSGASVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELIEK 87
SL G +A + + +V +D K++ A+ +K+ +EE++ L ++ LI K
Sbjct: 45 SLTGCWSAGTISKVTVNPGLLVPLDVKLDPAVQQLKNQ----EKEEMKALNDKFASLIGK 100
Query: 88 NSQLEQENNLLKT 100
LEQ N LL+T
Sbjct: 101 VQALEQRNQLLET 113
>gi|125628632 keratin 80 isoform b [Homo sapiens]
Length = 422
Score = 32.3 bits (72), Expect = 0.14
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 28 SLLGTENASVRLDNSSSGASVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELIEK 87
SL G +A + + +V +D K++ A+ +K+ +EE++ L ++ LI K
Sbjct: 45 SLTGCWSAGTISKVTVNPGLLVPLDVKLDPAVQQLKNQ----EKEEMKALNDKFASLIGK 100
Query: 88 NSQLEQENNLLKT 100
LEQ N LL+T
Sbjct: 101 VQALEQRNQLLET 113
>gi|223941798 N-glycanase 1 isoform 2 [Homo sapiens]
Length = 636
Score = 32.0 bits (71), Expect = 0.18
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 26/112 (23%)
Query: 36 SVRLDNSSSGASVV----AIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELI--EKNS 89
S+R+ N++ ++ A++ E + ++HL++ + VE L ++I++LI E++S
Sbjct: 53 SIRIGNTAFSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQL-QKIRDLIAIERSS 111
Query: 90 QLEQENNLLKTLASPEQLAQFQAQLQTGSPPATTQPQGTTQPPAQPASQGSG 141
+L+ N K +S QP +TQ P P+S SG
Sbjct: 112 RLDGSNKSHKVKSSQ-------------------QPAASTQLPTTPSSNPSG 144
>gi|21314690 N-glycanase 1 isoform 1 [Homo sapiens]
Length = 654
Score = 32.0 bits (71), Expect = 0.18
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 26/112 (23%)
Query: 36 SVRLDNSSSGASVV----AIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELI--EKNS 89
S+R+ N++ ++ A++ E + ++HL++ + VE L ++I++LI E++S
Sbjct: 53 SIRIGNTAFSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQL-QKIRDLIAIERSS 111
Query: 90 QLEQENNLLKTLASPEQLAQFQAQLQTGSPPATTQPQGTTQPPAQPASQGSG 141
+L+ N K +S QP +TQ P P+S SG
Sbjct: 112 RLDGSNKSHKVKSSQ-------------------QPAASTQLPTTPSSNPSG 144
>gi|238859655 tetratricopeptide repeat domain 31 [Homo sapiens]
Length = 519
Score = 32.0 bits (71), Expect = 0.18
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 64 SHLMYAVREEVEVLKEQI----KELIEKNSQLEQ--ENNLLKTLASPEQLAQFQAQLQTG 117
S L A+ +++ V +E+ +EL+ + +++Q E LK E+ Q + + G
Sbjct: 139 SLLQVAMPQKLLVTEEEANRLAEELVAEEERMKQKAEKKRLKKKRQKERKRQERLEQYCG 198
Query: 118 SPPATTQPQGTTQPPAQPASQGSG 141
P A+T G PP+ P + G
Sbjct: 199 EPKASTTSDGDESPPSSPGNPVQG 222
>gi|223941808 N-glycanase 1 isoform 4 [Homo sapiens]
Length = 558
Score = 32.0 bits (71), Expect = 0.18
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 26/112 (23%)
Query: 36 SVRLDNSSSGASVV----AIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELI--EKNS 89
S+R+ N++ ++ A++ E + ++HL++ + VE L ++I++LI E++S
Sbjct: 53 SIRIGNTAFSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQL-QKIRDLIAIERSS 111
Query: 90 QLEQENNLLKTLASPEQLAQFQAQLQTGSPPATTQPQGTTQPPAQPASQGSG 141
+L+ N K +S QP +TQ P P+S SG
Sbjct: 112 RLDGSNKSHKVKSSQ-------------------QPAASTQLPTTPSSNPSG 144
>gi|223941803 N-glycanase 1 isoform 3 [Homo sapiens]
Length = 612
Score = 32.0 bits (71), Expect = 0.18
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 26/112 (23%)
Query: 36 SVRLDNSSSGASVV----AIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELI--EKNS 89
S+R+ N++ ++ A++ E + ++HL++ + VE L ++I++LI E++S
Sbjct: 11 SIRIGNTAFSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQL-QKIRDLIAIERSS 69
Query: 90 QLEQENNLLKTLASPEQLAQFQAQLQTGSPPATTQPQGTTQPPAQPASQGSG 141
+L+ N K +S QP +TQ P P+S SG
Sbjct: 70 RLDGSNKSHKVKSSQ-------------------QPAASTQLPTTPSSNPSG 102
>gi|10835242 protein kinase, cGMP-dependent, type I isoform 2 [Homo
sapiens]
Length = 686
Score = 31.2 bits (69), Expect = 0.31
Identities = 20/81 (24%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 66 LMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPEQLAQFQAQLQTGSPPATTQP 125
L YA++E++E L+++ + E +L+Q++ L++ L + +L ++++ ++ + A Q
Sbjct: 7 LQYALQEKIEELRQRDALIDELELELDQKDELIQKLQN--ELDKYRSVIRPATQQAQKQS 64
Query: 126 QGTTQ--PPAQPASQGSGPTA 144
T Q P + + + PTA
Sbjct: 65 ASTLQGEPRTKRQAISAEPTA 85
>gi|6912240 adaptor-related protein complex 3, mu 1 subunit [Homo
sapiens]
Length = 418
Score = 31.2 bits (69), Expect = 0.31
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 69 AVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPEQLAQFQAQLQTGS 118
A+++ V ++ E ++E+++ L E+N+LK L P + + TGS
Sbjct: 101 AIKDNVVIVYELLEEMLDNGFPLATESNILKELIKPPTILRSVVNSITGS 150
>gi|46370095 adaptor-related protein complex 3, mu 1 subunit [Homo
sapiens]
Length = 418
Score = 31.2 bits (69), Expect = 0.31
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 69 AVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPEQLAQFQAQLQTGS 118
A+++ V ++ E ++E+++ L E+N+LK L P + + TGS
Sbjct: 101 AIKDNVVIVYELLEEMLDNGFPLATESNILKELIKPPTILRSVVNSITGS 150
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.123 0.334
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,530,817
Number of Sequences: 37866
Number of extensions: 241240
Number of successful extensions: 3361
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 149
Number of HSP's that attempted gapping in prelim test: 2923
Number of HSP's gapped (non-prelim): 581
length of query: 144
length of database: 18,247,518
effective HSP length: 92
effective length of query: 52
effective length of database: 14,763,846
effective search space: 767719992
effective search space used: 767719992
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.