Guide to the Human Genome
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Name: MYCBP Sequence: fasta or formatted (103aa) NCBI GI: 57242777
Description:

c-myc binding protein

Referenced in:

Myc and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.7         12           2
 C cysteine            0.0          0           0
 D aspartate           2.9          3           1
 E glutamate          17.5         18           2
 F phenylalanine       1.9          2           1
 G glycine             1.9          2           1
 H histidine           2.9          3           2
 I isoleucine          1.9          2           1
 K lysine             12.6         13           2
 L leucine            13.6         14           2
 M methionine          1.9          2           1
 N asparagine          2.9          3           1
 P proline             5.8          6           2
 Q glutamine           2.9          3           1
 R arginine            4.9          5           2
 S serine              2.9          3           1
 T threonine           2.9          3           1
 V valine              3.9          4           1
 W tryptophan          0.0          0           0
 Y tyrosine            4.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   c-myc binding protein 
GOLGA3                0.044   Golgi autoantigen, golgin subfamily a, 3 
TSC22D3               0.044   TSC22 domain family, member 3 isoform 1 
TSC22D3               0.044   TSC22 domain family, member 3 isoform 2 
TSC22D1               0.044   TSC22 domain family, member 1 isoform 1 
TSC22D1               0.044   TSC22 domain family, member 1 isoform 2 
TSC22D4               0.044   TSC22 domain family, member 4 
CENPF                 0.039   centromere protein F 
GOLGB1                0.039   golgi autoantigen, golgin subfamily b, macrogolgin ...
KRT13                 0.039   keratin 13 isoform b 
KRT13                 0.039   keratin 13 isoform a 
KRT15                 0.033   keratin 15 
TSC22D3               0.033   TSC22 domain family, member 3 isoform 3 
TPR                   0.033   nuclear pore complex-associated protein TPR 
ADD3                  0.033   adducin 3 (gamma) isoform b 
ADD3                  0.033   adducin 3 (gamma) isoform b 
TLR1                  0.028   toll-like receptor 1 
TSC22D2               0.028   TSC22 domain family, member 2 
PABPN1                0.028   poly(A) binding protein, nuclear 1 
HISPPD1               0.028   Histidine acid phosphatase domain containing 1 [Homo...
GCC2                  0.028   GRIP and coiled-coil domain-containing 2 
SR140                 0.028   U2-associated SR140 protein 
EPPK1                 0.022   epiplakin 1 
C6orf174              0.022   hypothetical protein LOC387104 
HOOK1                 0.022   hook homolog 1 
CEP250                0.017   centrosomal protein 2 
JAKMIP2               0.017   Janus kinase and microtubule interacting protein 2 [...
UACA                  0.017   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.017   uveal autoantigen with coiled-coil domains and ankyr...
MYH11                 0.017   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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