| Name: SNAPC5 | Sequence: fasta or formatted (98aa) | NCBI GI: 5174689 | |
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Description: small nuclear RNA activating complex, polypeptide 5
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Referenced in: RNA Polymerase and General Transcription Factors
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.1 4 2 C cysteine 0.0 0 0 D aspartate 5.1 5 1 E glutamate 20.4 20 10 F phenylalanine 0.0 0 0 G glycine 1.0 1 1 H histidine 5.1 5 1 I isoleucine 2.0 2 1 K lysine 4.1 4 1 L leucine 15.3 15 2 M methionine 4.1 4 1 N asparagine 3.1 3 1 P proline 1.0 1 1 Q glutamine 5.1 5 1 R arginine 6.1 6 2 S serine 12.2 12 2 T threonine 6.1 6 2 V valine 5.1 5 1 W tryptophan 0.0 0 0 Y tyrosine 0.0 0 0 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 small nuclear RNA activating complex, polypeptide 5 [... GOLGB1 0.074 golgi autoantigen, golgin subfamily b, macrogolgin ... MBD3 0.055 methyl-CpG binding domain protein 3 FBXW7 0.055 F-box and WD repeat domain containing 7 isoform 1 [H... EHMT2 0.049 euchromatic histone-lysine N-methyltransferase 2 is... EHMT2 0.049 euchromatic histone-lysine N-methyltransferase 2 is... SCAF1 0.043 SR-related CTD-associated factor 1 BRD2 0.043 bromodomain containing 2 BRD2 0.043 bromodomain containing 2 TAOK2 0.043 TAO kinase 2 isoform 1 TAOK2 0.043 TAO kinase 2 isoform 2 MYT1 0.043 myelin transcription factor 1 RRP12 0.043 ribosomal RNA processing 12 homolog isoform 2 [Homo... RRP12 0.043 ribosomal RNA processing 12 homolog isoform 1 [Homo... HOMEZ 0.043 homeodomain leucine zipper protein CELSR2 0.037 cadherin EGF LAG seven-pass G-type receptor 2 CMYA5 0.037 cardiomyopathy associated 5 HDAC5 0.037 histone deacetylase 5 isoform 3 HDAC5 0.037 histone deacetylase 5 isoform 1 CLIP1 0.037 restin isoform b CLIP1 0.037 restin isoform a CCDC88A 0.037 coiled-coil domain containing 88A isoform 2 CCDC88A 0.037 coiled-coil domain containing 88A isoform 1 HAP1 0.037 huntingtin-associated protein 1 isoform 4 HAP1 0.037 huntingtin-associated protein 1 isoform 3 HAP1 0.037 huntingtin-associated protein 1 isoform 2 CCDC136 0.037 coiled-coil domain containing 136 LOC727832 0.031 golgi autoantigen, golgin subfamily a-like ROCK1 0.031 Rho-associated, coiled-coil containing protein kinase... MYH11 0.031 smooth muscle myosin heavy chain 11 isoform SM1A [Ho...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
