Search of human proteins with 50962890

Search of human proteins with 50962890

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|50962890 hypothetical protein LOC92070 [Homo sapiens]
         (186 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|50962890 hypothetical protein LOC92070 [Homo sapiens]              387   e-108
gi|142976757 immediate early response 5 [Homo sapiens]                 39   0.002
gi|31543148 hypothetical protein LOC79173 [Homo sapiens]               32   0.32 
gi|239754124 PREDICTED: hypothetical protein [Homo sapiens]            32   0.41 
gi|239748626 PREDICTED: hypothetical protein XP_002346747 [Homo ...    32   0.41 
gi|239742653 PREDICTED: hypothetical protein XP_002342604 [Homo ...    32   0.41 
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera...    30   0.92 
gi|190684671 mitogen-activated protein kinase binding protein 1 ...    30   1.2  
gi|190684677 mitogen-activated protein kinase binding protein 1 ...    30   1.2  
gi|119395716 forkhead box C1 [Homo sapiens]                            29   2.0  
gi|56711322 ring finger protein 43 [Homo sapiens]                      29   2.0  
gi|24308303 SH3-binding domain protein 5-like [Homo sapiens]           29   2.0  
gi|5453948 protein phosphatase 1, regulatory subunit 3D [Homo sa...    29   2.7  
gi|94400919 WD repeat domain 90 [Homo sapiens]                         29   2.7  
gi|7662162 ALEX2 protein [Homo sapiens]                                29   2.7  
gi|29540562 ALEX2 protein [Homo sapiens]                               29   2.7  
gi|148612882 cat eye syndrome chromosome region, candidate 2 [Ho...    28   4.6  
gi|169214772 PREDICTED: similar to hCG1783157 [Homo sapiens]           28   5.9  
gi|239751973 PREDICTED: hypothetical protein XP_002348052 [Homo ...    28   5.9  
gi|239746455 PREDICTED: hypothetical protein XP_002344215 [Homo ...    28   5.9  
gi|145701025 multiple EGF-like-domains 8 [Homo sapiens]                28   5.9  
gi|7662236 TSC22 domain family, member 2 [Homo sapiens]                28   5.9  
gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens]              27   7.8  
gi|239751430 PREDICTED: hypothetical protein [Homo sapiens]            27   7.8  
gi|239745934 PREDICTED: hypothetical protein XP_002343619 [Homo ...    27   7.8  
gi|193083163 roundabout, axon guidance receptor, homolog 2 isofo...    27   7.8  
gi|61888896 roundabout, axon guidance receptor, homolog 2 isofor...    27   7.8  
gi|4504713 insulinoma-associated 1 [Homo sapiens]                      27   7.8  
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        27   7.8  
gi|157671949 rearranged L-myc fusion [Homo sapiens]                    27   7.8  

>gi|50962890 hypothetical protein LOC92070 [Homo sapiens]
          Length = 186

 Score =  387 bits (993), Expect = e-108
 Identities = 186/186 (100%), Positives = 186/186 (100%)

Query: 1   MWLVECTGRDLTGLSCLLGMDRQPRRRQHVAGCRDVPPPLPQGSWGQTSPRHSILCSKSG 60
           MWLVECTGRDLTGLSCLLGMDRQPRRRQHVAGCRDVPPPLPQGSWGQTSPRHSILCSKSG
Sbjct: 1   MWLVECTGRDLTGLSCLLGMDRQPRRRQHVAGCRDVPPPLPQGSWGQTSPRHSILCSKSG 60

Query: 61  CDLLGGGEYNGETSGEEFLAPAWTCRAQQAATWLSVQQTSHKALGPAGGAAMSSKLSPEE 120
           CDLLGGGEYNGETSGEEFLAPAWTCRAQQAATWLSVQQTSHKALGPAGGAAMSSKLSPEE
Sbjct: 61  CDLLGGGEYNGETSGEEFLAPAWTCRAQQAATWLSVQQTSHKALGPAGGAAMSSKLSPEE 120

Query: 121 QFLSRIHFLRTFMCSVAGAELPGIPQATENGEGCRPARDPASSPSSLSMASVYTQCSSAQ 180
           QFLSRIHFLRTFMCSVAGAELPGIPQATENGEGCRPARDPASSPSSLSMASVYTQCSSAQ
Sbjct: 121 QFLSRIHFLRTFMCSVAGAELPGIPQATENGEGCRPARDPASSPSSLSMASVYTQCSSAQ 180

Query: 181 LVSALS 186
           LVSALS
Sbjct: 181 LVSALS 186


>gi|142976757 immediate early response 5 [Homo sapiens]
          Length = 327

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 38/140 (27%), Positives = 55/140 (39%), Gaps = 9/140 (6%)

Query: 31  AGCRDVPPPLPQGSWGQTSPRHSILCSKSGCDLLGGGEYNGETSGEEFLAPAWTCRAQQA 90
           AG  + PPP  + SW +T P+     S S    +G        +G   +       A +A
Sbjct: 81  AGWGEPPPPAARASWPETEPQPE-RSSVSDAPRVGDEVPVATVTGVGDVFQGGEADATEA 139

Query: 91  ATWLSVQQTSHKALGPAGGAAMSSKLSPEEQFLSRIHFLRTFMCSVAGAELPGIPQATEN 150
           A W  V+     A   A G A    + PE    +R    R   C + G + PG P AT  
Sbjct: 140 A-WSRVEGPRQAAAREAEGTAGGWGVFPEVSRAAR----RPCGCPLGGEDPPGTPAATPR 194

Query: 151 GEGC---RPARDPASSPSSL 167
              C   +PA D   +P ++
Sbjct: 195 AACCCAPQPAEDEPPAPPAV 214


>gi|31543148 hypothetical protein LOC79173 [Homo sapiens]
          Length = 637

 Score = 32.0 bits (71), Expect = 0.32
 Identities = 15/29 (51%), Positives = 17/29 (58%)

Query: 137 AGAELPGIPQATENGEGCRPARDPASSPS 165
           AGA LPG PQ   +G  C PA  P S P+
Sbjct: 261 AGAGLPGGPQEEGDGVPCTPASAPTSGPA 289


>gi|239754124 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 99

 Score = 31.6 bits (70), Expect = 0.41
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)

Query: 124 SRIHFLRTFMCSVAGAELPGIPQATENGEGCRPARDPASSPS---SLSMASVYTQCSSAQ 180
           S++  L  F+ S AG+ +PG   A + G G   + + + SPS   ++ + S  T C S+ 
Sbjct: 30  SKMSTLLFFLVSPAGSSVPGETAAEDGGSGVVVSGETSVSPSPPAAIEVGSCNTDCGSSA 89

Query: 181 LV 182
           ++
Sbjct: 90  IL 91


>gi|239748626 PREDICTED: hypothetical protein XP_002346747 [Homo
           sapiens]
          Length = 99

 Score = 31.6 bits (70), Expect = 0.41
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)

Query: 124 SRIHFLRTFMCSVAGAELPGIPQATENGEGCRPARDPASSPS---SLSMASVYTQCSSAQ 180
           S++  L  F+ S AG+ +PG   A + G G   + + + SPS   ++ + S  T C S+ 
Sbjct: 30  SKMSTLLFFLVSPAGSSVPGETAAEDGGSGVVVSGETSVSPSPPAAIEVGSCNTDCGSSA 89

Query: 181 LV 182
           ++
Sbjct: 90  IL 91


>gi|239742653 PREDICTED: hypothetical protein XP_002342604 [Homo
           sapiens]
          Length = 99

 Score = 31.6 bits (70), Expect = 0.41
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)

Query: 124 SRIHFLRTFMCSVAGAELPGIPQATENGEGCRPARDPASSPS---SLSMASVYTQCSSAQ 180
           S++  L  F+ S AG+ +PG   A + G G   + + + SPS   ++ + S  T C S+ 
Sbjct: 30  SKMSTLLFFLVSPAGSSVPGETAAEDGGSGVVVSGETSVSPSPPAAIEVGSCNTDCGSSA 89

Query: 181 LV 182
           ++
Sbjct: 90  IL 91


>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase
           4 [Homo sapiens]
          Length = 1039

 Score = 30.4 bits (67), Expect = 0.92
 Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 8/94 (8%)

Query: 73  TSGEEFLAPAWTCRAQQAATWLSVQQTSHKALGPAGGAAMSSKLSPEEQFLSRIHFLRTF 132
           T G +   P    RAQ        Q  +     P   + +SS+  P   FLS        
Sbjct: 579 TGGPQATQPRPPARAQATQGGREGQARTLGPAAPTVDSNLSSEARPVTSFLS-------- 630

Query: 133 MCSVAGAELPGIPQATENGEGCRPARDPASSPSS 166
           +  V+G +LPG  +  E GE      D A+S  S
Sbjct: 631 LSQVSGPQLPGEGEEEEEGEDDGAPGDEAASEDS 664


>gi|190684671 mitogen-activated protein kinase binding protein 1
            isoform a [Homo sapiens]
          Length = 1508

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 19/96 (19%)

Query: 97   QQTSHKALGPAGGAAMSSKLSPEEQFLSRIHFLRTFMCSVAGAELPGIP-QATENGEG-- 153
            ++     +GP G    S +   +EQFL + HF      ++A    PG P Q  E  E   
Sbjct: 1037 EEEEEGGMGPYGLQEGSPQTPDQEQFLKQ-HFE-----TLASGAAPGAPVQVPERSESRS 1090

Query: 154  ----------CRPARDPASSPSSLSMASVYTQCSSA 179
                       RP R+P+ S SSL++ S   Q   A
Sbjct: 1091 ISSRFLLQVQTRPLREPSPSSSSLALMSRPAQVPQA 1126


>gi|190684677 mitogen-activated protein kinase binding protein 1
            isoform b [Homo sapiens]
          Length = 1514

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 19/96 (19%)

Query: 97   QQTSHKALGPAGGAAMSSKLSPEEQFLSRIHFLRTFMCSVAGAELPGIP-QATENGEG-- 153
            ++     +GP G    S +   +EQFL + HF      ++A    PG P Q  E  E   
Sbjct: 1043 EEEEEGGMGPYGLQEGSPQTPDQEQFLKQ-HFE-----TLASGAAPGAPVQVPERSESRS 1096

Query: 154  ----------CRPARDPASSPSSLSMASVYTQCSSA 179
                       RP R+P+ S SSL++ S   Q   A
Sbjct: 1097 ISSRFLLQVQTRPLREPSPSSSSLALMSRPAQVPQA 1132


>gi|119395716 forkhead box C1 [Homo sapiens]
          Length = 553

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 4/85 (4%)

Query: 36  VPPPLPQGSW--GQTSPRHSILCSKSGCDLLGGGEYNGETSGEEFLAPAWTCRAQQAATW 93
           + PPL  G++  GQ+S   S     S     GGG      +G    A  + C  Q  + +
Sbjct: 344 IAPPLALGAYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGGAGTYHCNLQAMSLY 403

Query: 94  LSVQQTSH--KALGPAGGAAMSSKL 116
            + ++  H   A G AGG+A+   L
Sbjct: 404 AAGERGGHLQGAPGGAGGSAVDDPL 428


>gi|56711322 ring finger protein 43 [Homo sapiens]
          Length = 783

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 23/165 (13%)

Query: 22  RQPRRRQHVAGCRDVPPPLPQGSWG----QTSPRHSILCSKSGCDLLGGGEYNGETSGEE 77
           R P  +Q +AG +    P  QG WG    Q++ +H   C      L      +   SGE 
Sbjct: 397 RAPGEQQRLAGAQH---PYAQG-WGLSHLQSTSQHPAACP---VPLRRARPPDSSGSGES 449

Query: 78  FLAPAWTCRAQQAATWLSVQQTSHKALGPAGGAAMSSKLSPEEQFLSRIHFLRTFMCSVA 137
           +          + + +L+    S  + GP  G++  S ++  +  L  +H   +  CS  
Sbjct: 450 YCT--------ERSGYLADGPASDSSSGPCHGSSSDSVVNCTDISLQGVHGSSSTFCSSL 501

Query: 138 GAELPGIPQATENGEGCRPARDPASSPSSLSMASVY----TQCSS 178
            ++   +   +  G+  R    P+ +    S+ SV     TQ SS
Sbjct: 502 SSDFDPLVYCSPKGDPQRVDMQPSVTSRPRSLDSVVPTGETQVSS 546


>gi|24308303 SH3-binding domain protein 5-like [Homo sapiens]
          Length = 393

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 8/83 (9%)

Query: 104 LGPAGGAAMSSKLSPEEQFLSRIHFLRTFMCSVAGAELPGIPQATENGEGCRPARDPASS 163
           LGP   + + ++  PE+        +      + GAE  G+ + +  G G  P  D  S 
Sbjct: 284 LGPRRSSPVGAEAGPED--------MEDGDSGIEGAEGAGLEEGSSLGPGPAPDTDTLSL 335

Query: 164 PSSLSMASVYTQCSSAQLVSALS 186
            S  ++AS   +C S + +  LS
Sbjct: 336 LSLRTVASDLQKCDSVEHLRGLS 358


>gi|5453948 protein phosphatase 1, regulatory subunit 3D [Homo
           sapiens]
          Length = 299

 Score = 28.9 bits (63), Expect = 2.7
 Identities = 31/115 (26%), Positives = 46/115 (40%), Gaps = 16/115 (13%)

Query: 35  DVPPPLPQGSWGQTSPRHSILCSKSGCDLLG--GGEYNGETSGEEFLAPAWTCRAQQAAT 92
           D PPP+    +G+   R  +   +  C  LG  G       + E+ +A  +T      + 
Sbjct: 158 DFPPPVEAADFGERLQRQLVCLERVTCSDLGISGTVRVCNVAFEKQVAVRYT-----FSG 212

Query: 93  WLSVQQTSHKALGPAGGAAMSSKLS---PEEQFL----SRIHFLRTFMCSVAGAE 140
           W S  +   +  GPAG        +   P   FL    SR+HF   +   VAGAE
Sbjct: 213 WRSTHEAVARWRGPAGPEGTEDVFTFGFPVPPFLLELGSRVHFAVRY--QVAGAE 265


>gi|94400919 WD repeat domain 90 [Homo sapiens]
          Length = 1748

 Score = 28.9 bits (63), Expect = 2.7
 Identities = 14/38 (36%), Positives = 17/38 (44%)

Query: 142  PGIPQATENGEGCRPARDPASSPSSLSMASVYTQCSSA 179
            PG P A + G G  P  D AS  S L    V   C ++
Sbjct: 1009 PGAPPACKTGPGAGPLEDAASRASELPRQQVPKPCQAS 1046


>gi|7662162 ALEX2 protein [Homo sapiens]
          Length = 632

 Score = 28.9 bits (63), Expect = 2.7
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 8/95 (8%)

Query: 72  ETSGEEFLAPAWTCRAQQAATWLSVQQTSHKALGPAG----GAAMSSKLSPEEQFLSRIH 127
           +T G E +APA +    Q+      Q+     +GP      GAAM+S ++P       + 
Sbjct: 91  DTVGAEAVAPAASSAEAQSGAGSQAQEADGAGVGPKAESVVGAAMASAIAPPPGVTEALG 150

Query: 128 FLRTFMCSVAGAELPGIPQATENGEGCRPARDPAS 162
                  ++AGA  P + +A    E  R A  P +
Sbjct: 151 AAEA--PAMAGA--PKVAEAPREAETSRAAVPPGT 181


>gi|29540562 ALEX2 protein [Homo sapiens]
          Length = 632

 Score = 28.9 bits (63), Expect = 2.7
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 8/95 (8%)

Query: 72  ETSGEEFLAPAWTCRAQQAATWLSVQQTSHKALGPAG----GAAMSSKLSPEEQFLSRIH 127
           +T G E +APA +    Q+      Q+     +GP      GAAM+S ++P       + 
Sbjct: 91  DTVGAEAVAPAASSAEAQSGAGSQAQEADGAGVGPKAESVVGAAMASAIAPPPGVTEALG 150

Query: 128 FLRTFMCSVAGAELPGIPQATENGEGCRPARDPAS 162
                  ++AGA  P + +A    E  R A  P +
Sbjct: 151 AAEA--PAMAGA--PKVAEAPREAETSRAAVPPGT 181


>gi|148612882 cat eye syndrome chromosome region, candidate 2 [Homo
           sapiens]
          Length = 1484

 Score = 28.1 bits (61), Expect = 4.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 19  GMDRQPRRRQHVAGCRDVPPPLPQGSWGQTS 49
           G   QPR   HV   R + PP+P   W + S
Sbjct: 817 GPSHQPRTLGHVMDSRVMRPPVPPNQWTEQS 847


>gi|169214772 PREDICTED: similar to hCG1783157 [Homo sapiens]
          Length = 538

 Score = 27.7 bits (60), Expect = 5.9
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 14/76 (18%)

Query: 53  SILCSKSGCDLLGGGEYNGET---SGEEFLAPAW-----------TCRAQQAATWLSVQQ 98
           S LC + G +L GG +   +    +G   L P W           TC A      ++ Q+
Sbjct: 116 SCLCFQDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQE 175

Query: 99  TSHKALGPAGGAAMSS 114
              K  GP G    SS
Sbjct: 176 GGTKEAGPGGAGGRSS 191


>gi|239751973 PREDICTED: hypothetical protein XP_002348052 [Homo
           sapiens]
          Length = 537

 Score = 27.7 bits (60), Expect = 5.9
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 14/76 (18%)

Query: 53  SILCSKSGCDLLGGGEYNGET---SGEEFLAPAW-----------TCRAQQAATWLSVQQ 98
           S LC + G +L GG +   +    +G   L P W           TC A      ++ Q+
Sbjct: 116 SCLCFQDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQE 175

Query: 99  TSHKALGPAGGAAMSS 114
              K  GP G    SS
Sbjct: 176 GGTKEAGPGGAGGRSS 191


>gi|239746455 PREDICTED: hypothetical protein XP_002344215 [Homo
           sapiens]
          Length = 537

 Score = 27.7 bits (60), Expect = 5.9
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 14/76 (18%)

Query: 53  SILCSKSGCDLLGGGEYNGET---SGEEFLAPAW-----------TCRAQQAATWLSVQQ 98
           S LC + G +L GG +   +    +G   L P W           TC A      ++ Q+
Sbjct: 116 SCLCFQDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQE 175

Query: 99  TSHKALGPAGGAAMSS 114
              K  GP G    SS
Sbjct: 176 GGTKEAGPGGAGGRSS 191


>gi|145701025 multiple EGF-like-domains 8 [Homo sapiens]
          Length = 2778

 Score = 27.7 bits (60), Expect = 5.9
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 28  QHVAGCRDVPPPLPQGSWGQTSPRHS-ILCSKSGCDLLGGGEYNGETSGE 76
           Q V+G    PP  P+G     S R+S +     G  LL  G Y+G   G+
Sbjct: 490 QWVSGAELAPPGTPEGRAAPPSGRYSHVAAVLGGSVLLVAGGYSGRPRGD 539


>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
          Length = 780

 Score = 27.7 bits (60), Expect = 5.9
 Identities = 40/161 (24%), Positives = 51/161 (31%), Gaps = 31/161 (19%)

Query: 27  RQHVAGCRDVPPPLPQGSWGQTSPRHSIL--------CSKSGCDLLGGGEYNGETSGEEF 78
           +QHVAG +   P  P  +    SP  +           S  G  L+G      E      
Sbjct: 382 QQHVAGLQPPSPAQPSSTGAAASPATAATLPVGTGQNASSVGAQLMGASSQPSEAMAPRT 441

Query: 79  -------LAPAWTCRAQQAATWLSVQQTSHKALGPAGGAAMSSKLSPEEQFLSRIHFLRT 131
                  +AP        A     VQ      LGPAG     S   P+      +     
Sbjct: 442 GPAQGGQVAPCQPTGVPPATVGGVVQP----CLGPAGAGQPQSVPPPQMGGSGPL----- 492

Query: 132 FMCSVAGAELPGIPQATENGEGCRPARDPASSPSSLSMASV 172
                  + +PG P A   G    PA  PA S  S+S  SV
Sbjct: 493 -------SAVPGGPHAVVPGVPNVPAAVPAPSVPSVSTTSV 526


>gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens]
          Length = 1586

 Score = 27.3 bits (59), Expect = 7.8
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%)

Query: 106  PAGGAAMSSKLSPEE----QFLSRIHFLRTFMCSVAGAELPGIPQATENGEGCRPARDPA 161
            P G  +    L P      Q + R+++++     VAG++ PG+   T +   C     P 
Sbjct: 1195 PGGLDSTQPHLQPRSGAPSQGIPRVNYMQQLRQPVAGSQCPGM-TTTMSPHACYGQVHPQ 1253

Query: 162  SSPSSLSMA 170
             SPS++S A
Sbjct: 1254 LSPSTISGA 1262


>gi|239751430 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 303

 Score = 27.3 bits (59), Expect = 7.8
 Identities = 24/86 (27%), Positives = 26/86 (30%), Gaps = 9/86 (10%)

Query: 39  PLPQGSWGQTSPRHSILCSKSGCDLLGGGEYNGETSGEEFLAPAWTCRAQQAATWLSVQQ 98
           P P  SW    P     C   GC         G  SG       W   A  A    S  Q
Sbjct: 108 PAPPASWAPPQPGRRPTCP--GC-------CRGAASGAPRWVRTWAAAAVAAGPGRSAPQ 158

Query: 99  TSHKALGPAGGAAMSSKLSPEEQFLS 124
              +A   A  A  SS   PE   +S
Sbjct: 159 REPRAAWAACPAGPSSAAGPERGHVS 184


>gi|239745934 PREDICTED: hypothetical protein XP_002343619 [Homo
           sapiens]
          Length = 303

 Score = 27.3 bits (59), Expect = 7.8
 Identities = 24/86 (27%), Positives = 26/86 (30%), Gaps = 9/86 (10%)

Query: 39  PLPQGSWGQTSPRHSILCSKSGCDLLGGGEYNGETSGEEFLAPAWTCRAQQAATWLSVQQ 98
           P P  SW    P     C   GC         G  SG       W   A  A    S  Q
Sbjct: 108 PAPPASWAPPQPGRRPTCP--GC-------CRGAASGAPRWVRTWAAAAVAAGPGRSAPQ 158

Query: 99  TSHKALGPAGGAAMSSKLSPEEQFLS 124
              +A   A  A  SS   PE   +S
Sbjct: 159 REPRAAWAACPAGPSSAAGPERGHVS 184


>gi|193083163 roundabout, axon guidance receptor, homolog 2 isoform
            ROBO2a [Homo sapiens]
          Length = 1394

 Score = 27.3 bits (59), Expect = 7.8
 Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 1/71 (1%)

Query: 15   SCLLGMDRQPR-RRQHVAGCRDVPPPLPQGSWGQTSPRHSILCSKSGCDLLGGGEYNGET 73
            S  L   ++PR  ++H  G  D  P LP    G T     +  SK      GG   +G  
Sbjct: 1292 SAALSQSQRPRPTKKHKGGRMDQQPALPHRREGMTDEEALVPYSKPSFPSPGGHSSSGTA 1351

Query: 74   SGEEFLAPAWT 84
            S +    P  T
Sbjct: 1352 SSKGSTGPRKT 1362


>gi|61888896 roundabout, axon guidance receptor, homolog 2 isoform
            ROBO2b [Homo sapiens]
          Length = 1378

 Score = 27.3 bits (59), Expect = 7.8
 Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 1/71 (1%)

Query: 15   SCLLGMDRQPR-RRQHVAGCRDVPPPLPQGSWGQTSPRHSILCSKSGCDLLGGGEYNGET 73
            S  L   ++PR  ++H  G  D  P LP    G T     +  SK      GG   +G  
Sbjct: 1276 SAALSQSQRPRPTKKHKGGRMDQQPALPHRREGMTDEEALVPYSKPSFPSPGGHSSSGTA 1335

Query: 74   SGEEFLAPAWT 84
            S +    P  T
Sbjct: 1336 SSKGSTGPRKT 1346


>gi|4504713 insulinoma-associated 1 [Homo sapiens]
          Length = 510

 Score = 27.3 bits (59), Expect = 7.8
 Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 1/85 (1%)

Query: 75  GEEFLAPAWTCRAQQAATWLSVQQTSHKALGPAGGAAMSSKLSPEEQFLSRIHFLRTFMC 134
           G +  AP       + A  L +  ++   L P  G + +SK   +E+ L  +H  + F C
Sbjct: 413 GPDEKAPQEAAGDGEGAGVLGLSASAECHLCPVCGESFASK-GAQERHLRLLHAAQVFPC 471

Query: 135 SVAGAELPGIPQATENGEGCRPARD 159
               A     P  T +   C P+ +
Sbjct: 472 KYCPATFYSSPGLTRHINKCHPSEN 496


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 27.3 bits (59), Expect = 7.8
 Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 9/83 (10%)

Query: 106  PAGGAAMSSKLSPEEQFLSRIHFLRTFMCSVAGAELPGIPQATENGEGCRPARDPAS--- 162
            PA    MS + +P     SRI        ++A A  P IP A    +   PA   A    
Sbjct: 2212 PAPVPLMSLRTAPAANLASRIPAASAAAMNLASARTPAIPTAVNLADSRTPAAAAAMNLA 2271

Query: 163  ------SPSSLSMASVYTQCSSA 179
                  +PS++++A   T  + A
Sbjct: 2272 SPRTAVAPSAVNLADPRTPTAPA 2294


>gi|157671949 rearranged L-myc fusion [Homo sapiens]
          Length = 1914

 Score = 27.3 bits (59), Expect = 7.8
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 139  AELPGIPQATENGEGCRPARDPASSPSSLSMASVYTQCSSAQLVSAL 185
            AEL G P +      C P +D  SS + L  +   T+  ++ + S +
Sbjct: 1229 AELGGDPSSNSEKPHCHPKKDECSSETDLESSCEETESKTSDISSPI 1275


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.130    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,815,727
Number of Sequences: 37866
Number of extensions: 445542
Number of successful extensions: 1317
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1308
Number of HSP's gapped (non-prelim): 33
length of query: 186
length of database: 18,247,518
effective HSP length: 96
effective length of query: 90
effective length of database: 14,612,382
effective search space: 1315114380
effective search space used: 1315114380
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.