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Search of human proteins with 50959115
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|50959115 THO complex 5 [Homo sapiens]
(683 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|50959115 THO complex 5 [Homo sapiens] 1382 0.0
gi|50959110 THO complex 5 [Homo sapiens] 1382 0.0
gi|50959102 THO complex 5 [Homo sapiens] 1382 0.0
gi|50959085 THO complex 5 [Homo sapiens] 1382 0.0
gi|7705415 hook homolog 1 [Homo sapiens] 49 2e-05
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 44 5e-04
gi|31377611 coiled-coil domain containing 148 [Homo sapiens] 42 0.001
gi|118498356 kinectin 1 isoform a [Homo sapiens] 40 0.007
gi|118498368 kinectin 1 isoform c [Homo sapiens] 40 0.007
gi|33620775 kinectin 1 isoform a [Homo sapiens] 40 0.007
gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens] 40 0.007
gi|219555718 synaptonemal complex central element protein 1 isof... 39 0.012
gi|219555716 synaptonemal complex central element protein 1 isof... 39 0.012
gi|29171755 PTPRF interacting protein alpha 2 [Homo sapiens] 39 0.021
gi|5453980 DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo sap... 38 0.027
gi|55770834 centromere protein F [Homo sapiens] 38 0.027
gi|56550043 sarcolemma associated protein [Homo sapiens] 38 0.027
gi|34878777 ring finger protein 20 [Homo sapiens] 37 0.046
gi|21735548 centrosomal protein 2 [Homo sapiens] 37 0.060
gi|41872583 Rho-associated, coiled-coil containing protein kinas... 37 0.060
gi|237858621 polyamine modulated factor 1 binding protein 1 isof... 37 0.060
gi|237858619 polyamine modulated factor 1 binding protein 1 isof... 37 0.060
gi|4502443 dystonin isoform 1e precursor [Homo sapiens] 37 0.079
gi|94680976 coiled-coil domain containing 112 isoform 1 [Homo sa... 37 0.079
gi|145580595 coiled-coil domain containing 112 isoform 2 [Homo s... 37 0.079
gi|56961680 coiled-coil domain containing 147 [Homo sapiens] 37 0.079
gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens] 36 0.10
gi|210032790 hypothetical protein LOC27146 [Homo sapiens] 36 0.10
gi|116686122 kinesin family member 4 [Homo sapiens] 36 0.13
gi|31542634 filamin A interacting protein 1 [Homo sapiens] 36 0.13
>gi|50959115 THO complex 5 [Homo sapiens]
Length = 683
Score = 1382 bits (3577), Expect = 0.0
Identities = 683/683 (100%), Positives = 683/683 (100%)
Query: 1 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ 60
MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
Sbjct: 1 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ 60
Query: 61 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK 120
ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
Sbjct: 61 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK 120
Query: 121 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM 180
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
Sbjct: 121 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM 180
Query: 181 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS 240
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
Sbjct: 181 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS 240
Query: 241 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL 300
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
Sbjct: 241 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL 300
Query: 301 FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL 360
FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL
Sbjct: 301 FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL 360
Query: 361 HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY 420
HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
Sbjct: 361 HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY 420
Query: 421 QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK 480
QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK
Sbjct: 421 QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK 480
Query: 481 TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHEDYMELHFTKDIV 540
TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHEDYMELHFTKDIV
Sbjct: 481 TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHEDYMELHFTKDIV 540
Query: 541 DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA 600
DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA
Sbjct: 541 DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA 600
Query: 601 MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR 660
MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
Sbjct: 601 MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR 660
Query: 661 LFRGPSRMKPFKYNHPQGFFSHR 683
LFRGPSRMKPFKYNHPQGFFSHR
Sbjct: 661 LFRGPSRMKPFKYNHPQGFFSHR 683
>gi|50959110 THO complex 5 [Homo sapiens]
Length = 683
Score = 1382 bits (3577), Expect = 0.0
Identities = 683/683 (100%), Positives = 683/683 (100%)
Query: 1 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ 60
MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
Sbjct: 1 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ 60
Query: 61 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK 120
ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
Sbjct: 61 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK 120
Query: 121 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM 180
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
Sbjct: 121 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM 180
Query: 181 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS 240
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
Sbjct: 181 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS 240
Query: 241 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL 300
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
Sbjct: 241 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL 300
Query: 301 FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL 360
FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL
Sbjct: 301 FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL 360
Query: 361 HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY 420
HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
Sbjct: 361 HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY 420
Query: 421 QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK 480
QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK
Sbjct: 421 QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK 480
Query: 481 TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHEDYMELHFTKDIV 540
TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHEDYMELHFTKDIV
Sbjct: 481 TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHEDYMELHFTKDIV 540
Query: 541 DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA 600
DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA
Sbjct: 541 DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA 600
Query: 601 MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR 660
MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
Sbjct: 601 MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR 660
Query: 661 LFRGPSRMKPFKYNHPQGFFSHR 683
LFRGPSRMKPFKYNHPQGFFSHR
Sbjct: 661 LFRGPSRMKPFKYNHPQGFFSHR 683
>gi|50959102 THO complex 5 [Homo sapiens]
Length = 683
Score = 1382 bits (3577), Expect = 0.0
Identities = 683/683 (100%), Positives = 683/683 (100%)
Query: 1 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ 60
MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
Sbjct: 1 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ 60
Query: 61 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK 120
ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
Sbjct: 61 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK 120
Query: 121 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM 180
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
Sbjct: 121 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM 180
Query: 181 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS 240
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
Sbjct: 181 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS 240
Query: 241 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL 300
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
Sbjct: 241 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL 300
Query: 301 FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL 360
FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL
Sbjct: 301 FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL 360
Query: 361 HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY 420
HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
Sbjct: 361 HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY 420
Query: 421 QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK 480
QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK
Sbjct: 421 QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK 480
Query: 481 TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHEDYMELHFTKDIV 540
TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHEDYMELHFTKDIV
Sbjct: 481 TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHEDYMELHFTKDIV 540
Query: 541 DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA 600
DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA
Sbjct: 541 DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA 600
Query: 601 MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR 660
MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
Sbjct: 601 MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR 660
Query: 661 LFRGPSRMKPFKYNHPQGFFSHR 683
LFRGPSRMKPFKYNHPQGFFSHR
Sbjct: 661 LFRGPSRMKPFKYNHPQGFFSHR 683
>gi|50959085 THO complex 5 [Homo sapiens]
Length = 683
Score = 1382 bits (3577), Expect = 0.0
Identities = 683/683 (100%), Positives = 683/683 (100%)
Query: 1 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ 60
MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
Sbjct: 1 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ 60
Query: 61 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK 120
ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
Sbjct: 61 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK 120
Query: 121 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM 180
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
Sbjct: 121 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM 180
Query: 181 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS 240
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
Sbjct: 181 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS 240
Query: 241 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL 300
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
Sbjct: 241 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL 300
Query: 301 FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL 360
FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL
Sbjct: 301 FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL 360
Query: 361 HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY 420
HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
Sbjct: 361 HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY 420
Query: 421 QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK 480
QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK
Sbjct: 421 QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK 480
Query: 481 TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHEDYMELHFTKDIV 540
TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHEDYMELHFTKDIV
Sbjct: 481 TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHEDYMELHFTKDIV 540
Query: 541 DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA 600
DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA
Sbjct: 541 DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA 600
Query: 601 MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR 660
MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
Sbjct: 601 MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR 660
Query: 661 LFRGPSRMKPFKYNHPQGFFSHR 683
LFRGPSRMKPFKYNHPQGFFSHR
Sbjct: 661 LFRGPSRMKPFKYNHPQGFFSHR 683
>gi|7705415 hook homolog 1 [Homo sapiens]
Length = 728
Score = 48.5 bits (114), Expect = 2e-05
Identities = 67/294 (22%), Positives = 129/294 (43%), Gaps = 41/294 (13%)
Query: 55 YKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRD 114
Y+ C+EL++ + E Q R + ++ E R ++ + L+ D
Sbjct: 271 YRVHCEELEKQLIEFQH---RNDELTSLAEETRALKDEIDV-------------LRATSD 314
Query: 115 QTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDIS 174
+ ++ + V+ Y +LQ+L L+K++ K L+ + + VSLEE K+A +
Sbjct: 315 KANKLESTVEIYRQKLQDL----NDLRKQV-KTLQETNMMYMHNTVSLEEELKKANAART 369
Query: 175 KAEV---TMGDPHQQTLA---RLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSS 228
+ E + D H + + R D + KRL EK+ L KE+++++ + KE
Sbjct: 370 QLETYKRQVQDLHVKLSSESKRADTLAFEMKRLEEKHEALLKEKERLIEQRDTLKE---- 425
Query: 229 LQPRLNSIMQASLPVQEYLFMPFDQAHKQYE--TARHLPPPLYVLFVQATAYGQACDKTL 286
N ++ S Q++L A K YE A +P +F++ Q +K L
Sbjct: 426 ----TNEELRCSQVQQDHLNQTDASATKSYENLAAEIMPVEYREVFIRL----QHENKML 477
Query: 287 SVAIEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEM 340
+ EGS +E + + + + + E++ +K R L Q++D +K +
Sbjct: 478 RLQQEGSENERIEELQEQLEQKHRKMNELETEQRLSKERIRELQQQIEDLQKSL 531
Score = 30.4 bits (67), Expect = 5.7
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 140 LQKEITKCLEFKSKHEEI-DLVSLEEFYKE----APPDISKAEVTMGDPHQQTLARLDWE 194
LQ + + + K E I ++++LEE + A ++ E+ P+ E
Sbjct: 121 LQLILGCAINCEKKQEHIQNIMTLEESVQHVVMTAIQELMSKEILSSPPNDAV-----GE 175
Query: 195 LEQR-KRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYL 247
LEQ+ KR E+ +E L+ KE++ + E +++LQ NS++ + + E L
Sbjct: 176 LEQQLKRALEELQEALAEKEELRQRCEELDMQVTTLQDEKNSLVSENEMMNEKL 229
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 43.9 bits (102), Expect = 5e-04
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 29 DTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERR 88
+ E + K E+E LRD ++ E Y+ EL+ + + KD+A+ +E +
Sbjct: 539 ELELQKKAILTESENKLRDLQQEAETYRTRILELESSLEKSLQENKNQSKDLAVHLEAEK 598
Query: 89 IQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCL 148
K N+ + ++K + + K + DA L + L Q E+ K
Sbjct: 599 ----------NKHNKEITVMVEKHKTELESLKHQQDA--LWTEKLQVLKQQYQTEMEKLR 646
Query: 149 EFKSKHEEIDLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYREC 208
E K + E+ L+ +E +A + + +++TL +LD + + + L+ + E
Sbjct: 647 E-KCEQEKETLLKDKEIIFQA---------HIEEMNEKTLEKLDVKQTELESLSSELSEV 696
Query: 209 LSNKEKILKEIEVKKEYLSSLQPRLNSIM 237
L + K+ +E+ V K+ ++ L + M
Sbjct: 697 LKARHKLEEELSVLKDQTDKMKQELEAKM 725
Score = 37.4 bits (85), Expect = 0.046
Identities = 44/232 (18%), Positives = 96/232 (41%), Gaps = 21/232 (9%)
Query: 39 EEAEVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTL 98
+E E+ + R+ E + L++ +E + + ++ +EE +Q
Sbjct: 492 KEQELTKKLQTREREFQEQMKVALEKSQSEYLKISQEKEQQESLALEELELQK------- 544
Query: 99 KKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEF-KSKHEEI 157
K + + +L+ + + + ++ L+ L E + K++ LE K+KH +
Sbjct: 545 KAILTESENKLRDLQQEAETYRTRILELESSLEKSLQENKNQSKDLAVHLEAEKNKHNKE 604
Query: 158 DLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSN------ 211
V +E+ E + + + Q + E+E+ + E+ +E L
Sbjct: 605 ITVMVEKHKTELESLKHQQDALWTEKLQVLKQQYQTEMEKLREKCEQEKETLLKDKEIIF 664
Query: 212 -------KEKILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHK 256
EK L++++VK+ L SL L+ +++A ++E L + DQ K
Sbjct: 665 QAHIEEMNEKTLEKLDVKQTELESLSSELSEVLKARHKLEEELSVLKDQTDK 716
Score = 30.8 bits (68), Expect = 4.3
Identities = 53/272 (19%), Positives = 113/272 (41%), Gaps = 33/272 (12%)
Query: 114 DQTHEAKQKVDAYHLQLQNLLYEVMHLQKEIT-KCLEFKS--------------KHEEI- 157
D + ++K +L++ +M L+ IT K +E +S +H+E+
Sbjct: 1504 DDKSKMEKKESNLETELKSQTARIMELEDHITQKTIEIESLNEVLKNYNQQKDIEHKELV 1563
Query: 158 -DLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKIL 216
L +E +E + +AE + Q + + ELE +K+ E + +KE+ L
Sbjct: 1564 QKLQHFQELGEEKDNRVKEAEEKILTLENQVYS-MKAELETKKKELEHVNLSVKSKEEEL 1622
Query: 217 KEIE--VKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYE--TARHLPPPLYVLF 272
K +E ++ E + L Q +++ L ++ +QY+ T HL L
Sbjct: 1623 KALEDRLESESAAKLAELKRKAEQKIAAIKKQLLSQMEEKEEQYKKGTESHL-SELNTKL 1681
Query: 273 VQATAYGQACDKTLSVAIEGSVDEAKALFKPPED----SQDDESDSDAEEEQTTKRRRPT 328
+ ++ L ++E S E + + ++ ++ +E+DS ++T + +
Sbjct: 1682 QEREREVHILEEKLK-SVESSQSETLIVPRSAKNVAAYTEQEEADSQGCVQKTYEEKISV 1740
Query: 329 LGVQLDDKRKEML-----KRHPLSVMLDLKCK 355
L L +K K + K +S +++C+
Sbjct: 1741 LQRNLTEKEKLLQRVGQEKEETVSSHFEMRCQ 1772
>gi|31377611 coiled-coil domain containing 148 [Homo sapiens]
Length = 591
Score = 42.4 bits (98), Expect = 0.001
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 111 KGRDQTHEAKQKVDAYH--LQLQNLLYEVMH------LQKEITKCLEFKSKHEEIDLVSL 162
K R E ++ D Y ++ QN+L + +QK + E + HE +++
Sbjct: 296 KSRHDLVEHEKYCDQYRFAIEQQNILISNWNKNRKDFIQKAVLTLTEACATHEMESMLAK 355
Query: 163 EEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVK 222
++ ++ KA+V HQ+ +ARL+ E+ R+R E+ +E L K+++L+ E K
Sbjct: 356 DKKKQQELCADLKAKVRQWRAHQEEVARLEMEISARRREKEEEKEKLWKKKELLQRAEKK 415
Query: 223 KE 224
K+
Sbjct: 416 KK 417
>gi|118498356 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 40.0 bits (92), Expect = 0.007
Identities = 48/219 (21%), Positives = 98/219 (44%), Gaps = 12/219 (5%)
Query: 31 EQEGKYYSEEA--EVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERR 88
E++GK S E E +L + + QE++ L EI +++ + ++I + +
Sbjct: 805 EKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSITSKVQE 864
Query: 89 IQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK--QKVDAYHLQLQNLLYEV-MHLQKEIT 145
+Q+ + +++N + + +K +D + K Q + + L+ + EV H KE +
Sbjct: 865 LQNLLKGKE-EQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEAS 923
Query: 146 KCLEFKS-----KHEEIDLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKR 200
+F+ K +E +L LE KE D+S + D + ++EQ K+
Sbjct: 924 SASQFEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKL-FKSQIEQLKQ 982
Query: 201 LAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQA 239
+ E++LK I +++ +S L L+S+ A
Sbjct: 983 QNYQQASSFPPHEELLKVISEREKEISGLWNELDSLKDA 1021
Score = 31.2 bits (69), Expect = 3.3
Identities = 56/302 (18%), Positives = 127/302 (42%), Gaps = 35/302 (11%)
Query: 30 TEQEGKYYSEEAEVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRI 89
TE+ GK EE V ++ + K QE +R E+Q + + E ++ +
Sbjct: 463 TEKTGKLQQEE--VQKKNAEQAATQLKVQLQEAERRWEEVQSYIRK--RTAEHEAAQQDL 518
Query: 90 QSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLE 149
QS F+ + + H +L T +KQ+++ +QL + ++ ++ + ++
Sbjct: 519 QS--KFVAKENEVQSLHSKLT----DTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQVQ 572
Query: 150 FKSKHEEIDLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECL 209
+ E +++F+ + S + + + + +A D +++Q + R+ L
Sbjct: 573 DILEQNEALKAQIQQFHSQIAAQTSAS--VLAEELHKVIAEKDKQIKQTEDSLASERDRL 630
Query: 210 SNKEKILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLY 269
++KE+ LK+I+ +N +++A + + L A++Q A L
Sbjct: 631 TSKEEELKDIQ-----------NMNFLLKAEVQKLQAL------ANEQAAAAHELEKMQQ 673
Query: 270 VLFVQATAYGQACDKTLSVAIEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTL 329
++V+ + ++ L I ++E K L + Q+ S+ ++ QT +P
Sbjct: 674 SVYVKDDKI-RLLEEQLQHEISNKMEEFKIL-----NDQNKALKSEVQKLQTLVSEQPNK 727
Query: 330 GV 331
V
Sbjct: 728 DV 729
Score = 31.2 bits (69), Expect = 3.3
Identities = 50/226 (22%), Positives = 91/226 (40%), Gaps = 23/226 (10%)
Query: 61 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFM--TLKKLNRLAHIRLKK--GRDQT 116
E L E+QDLK++ V+ ++ +H +K + L L K +++T
Sbjct: 771 ENSSLTKEVQDLKAKQNDQVSFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKT 830
Query: 117 -HEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKS--KHEEIDLVSLEEFYKEAPPDI 173
+ KQ++ A ++ N+ E +K E ++ K +E + +++ +E D+
Sbjct: 831 VQDLKQEIKALKEEIGNVQLEKAQQLSITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDL 890
Query: 174 SKAEVTMGD---------PHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKE 224
+ + D H Q +A+ + + E+ L KE LK +E
Sbjct: 891 ANTGKWLQDLQEENESLKAHVQEVAQHNLKEASSASQFEELEIVLKEKENELKRLEA--- 947
Query: 225 YLSSLQPRLNSIMQASLPVQE--YLFMPFDQAHKQ--YETARHLPP 266
L + L+S Q VQ+ LF + KQ Y+ A PP
Sbjct: 948 MLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSFPP 993
>gi|118498368 kinectin 1 isoform c [Homo sapiens]
Length = 1300
Score = 40.0 bits (92), Expect = 0.007
Identities = 48/219 (21%), Positives = 98/219 (44%), Gaps = 12/219 (5%)
Query: 31 EQEGKYYSEEA--EVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERR 88
E++GK S E E +L + + QE++ L EI +++ + ++I + +
Sbjct: 805 EKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSITSKVQE 864
Query: 89 IQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK--QKVDAYHLQLQNLLYEV-MHLQKEIT 145
+Q+ + +++N + + +K +D + K Q + + L+ + EV H KE +
Sbjct: 865 LQNLLKGKE-EQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEAS 923
Query: 146 KCLEFKS-----KHEEIDLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKR 200
+F+ K +E +L LE KE D+S + D + ++EQ K+
Sbjct: 924 SASQFEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKL-FKSQIEQLKQ 982
Query: 201 LAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQA 239
+ E++LK I +++ +S L L+S+ A
Sbjct: 983 QNYQQASSFPPHEELLKVISEREKEISGLWNELDSLKDA 1021
Score = 31.2 bits (69), Expect = 3.3
Identities = 56/302 (18%), Positives = 127/302 (42%), Gaps = 35/302 (11%)
Query: 30 TEQEGKYYSEEAEVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRI 89
TE+ GK EE V ++ + K QE +R E+Q + + E ++ +
Sbjct: 463 TEKTGKLQQEE--VQKKNAEQAATQLKVQLQEAERRWEEVQSYIRK--RTAEHEAAQQDL 518
Query: 90 QSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLE 149
QS F+ + + H +L T +KQ+++ +QL + ++ ++ + ++
Sbjct: 519 QS--KFVAKENEVQSLHSKLT----DTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQVQ 572
Query: 150 FKSKHEEIDLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECL 209
+ E +++F+ + S + + + + +A D +++Q + R+ L
Sbjct: 573 DILEQNEALKAQIQQFHSQIAAQTSAS--VLAEELHKVIAEKDKQIKQTEDSLASERDRL 630
Query: 210 SNKEKILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLY 269
++KE+ LK+I+ +N +++A + + L A++Q A L
Sbjct: 631 TSKEEELKDIQ-----------NMNFLLKAEVQKLQAL------ANEQAAAAHELEKMQQ 673
Query: 270 VLFVQATAYGQACDKTLSVAIEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTL 329
++V+ + ++ L I ++E K L + Q+ S+ ++ QT +P
Sbjct: 674 SVYVKDDKI-RLLEEQLQHEISNKMEEFKIL-----NDQNKALKSEVQKLQTLVSEQPNK 727
Query: 330 GV 331
V
Sbjct: 728 DV 729
Score = 31.2 bits (69), Expect = 3.3
Identities = 50/226 (22%), Positives = 91/226 (40%), Gaps = 23/226 (10%)
Query: 61 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFM--TLKKLNRLAHIRLKK--GRDQT 116
E L E+QDLK++ V+ ++ +H +K + L L K +++T
Sbjct: 771 ENSSLTKEVQDLKAKQNDQVSFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKT 830
Query: 117 -HEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKS--KHEEIDLVSLEEFYKEAPPDI 173
+ KQ++ A ++ N+ E +K E ++ K +E + +++ +E D+
Sbjct: 831 VQDLKQEIKALKEEIGNVQLEKAQQLSITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDL 890
Query: 174 SKAEVTMGD---------PHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKE 224
+ + D H Q +A+ + + E+ L KE LK +E
Sbjct: 891 ANTGKWLQDLQEENESLKAHVQEVAQHNLKEASSASQFEELEIVLKEKENELKRLEA--- 947
Query: 225 YLSSLQPRLNSIMQASLPVQE--YLFMPFDQAHKQ--YETARHLPP 266
L + L+S Q VQ+ LF + KQ Y+ A PP
Sbjct: 948 MLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSFPP 993
>gi|33620775 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 40.0 bits (92), Expect = 0.007
Identities = 48/219 (21%), Positives = 98/219 (44%), Gaps = 12/219 (5%)
Query: 31 EQEGKYYSEEA--EVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERR 88
E++GK S E E +L + + QE++ L EI +++ + ++I + +
Sbjct: 805 EKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSITSKVQE 864
Query: 89 IQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK--QKVDAYHLQLQNLLYEV-MHLQKEIT 145
+Q+ + +++N + + +K +D + K Q + + L+ + EV H KE +
Sbjct: 865 LQNLLKGKE-EQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEAS 923
Query: 146 KCLEFKS-----KHEEIDLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKR 200
+F+ K +E +L LE KE D+S + D + ++EQ K+
Sbjct: 924 SASQFEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENKL-FKSQIEQLKQ 982
Query: 201 LAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQA 239
+ E++LK I +++ +S L L+S+ A
Sbjct: 983 QNYQQASSFPPHEELLKVISEREKEISGLWNELDSLKDA 1021
Score = 31.2 bits (69), Expect = 3.3
Identities = 56/302 (18%), Positives = 127/302 (42%), Gaps = 35/302 (11%)
Query: 30 TEQEGKYYSEEAEVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRI 89
TE+ GK EE V ++ + K QE +R E+Q + + E ++ +
Sbjct: 463 TEKTGKLQQEE--VQKKNAEQAATQLKVQLQEAERRWEEVQSYIRK--RTAEHEAAQQDL 518
Query: 90 QSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLE 149
QS F+ + + H +L T +KQ+++ +QL + ++ ++ + ++
Sbjct: 519 QS--KFVAKENEVQSLHSKLT----DTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQVQ 572
Query: 150 FKSKHEEIDLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECL 209
+ E +++F+ + S + + + + +A D +++Q + R+ L
Sbjct: 573 DILEQNEALKAQIQQFHSQIAAQTSAS--VLAEELHKVIAEKDKQIKQTEDSLASERDRL 630
Query: 210 SNKEKILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLY 269
++KE+ LK+I+ +N +++A + + L A++Q A L
Sbjct: 631 TSKEEELKDIQ-----------NMNFLLKAEVQKLQAL------ANEQAAAAHELEKMQQ 673
Query: 270 VLFVQATAYGQACDKTLSVAIEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTL 329
++V+ + ++ L I ++E K L + Q+ S+ ++ QT +P
Sbjct: 674 SVYVKDDKI-RLLEEQLQHEISNKMEEFKIL-----NDQNKALKSEVQKLQTLVSEQPNK 727
Query: 330 GV 331
V
Sbjct: 728 DV 729
Score = 31.2 bits (69), Expect = 3.3
Identities = 50/226 (22%), Positives = 91/226 (40%), Gaps = 23/226 (10%)
Query: 61 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFM--TLKKLNRLAHIRLKK--GRDQT 116
E L E+QDLK++ V+ ++ +H +K + L L K +++T
Sbjct: 771 ENSSLTKEVQDLKAKQNDQVSFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKT 830
Query: 117 -HEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKS--KHEEIDLVSLEEFYKEAPPDI 173
+ KQ++ A ++ N+ E +K E ++ K +E + +++ +E D+
Sbjct: 831 VQDLKQEIKALKEEIGNVQLEKAQQLSITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDL 890
Query: 174 SKAEVTMGD---------PHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKE 224
+ + D H Q +A+ + + E+ L KE LK +E
Sbjct: 891 ANTGKWLQDLQEENESLKAHVQEVAQHNLKEASSASQFEELEIVLKEKENELKRLEA--- 947
Query: 225 YLSSLQPRLNSIMQASLPVQE--YLFMPFDQAHKQ--YETARHLPP 266
L + L+S Q VQ+ LF + KQ Y+ A PP
Sbjct: 948 MLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSFPP 993
>gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens]
Length = 1217
Score = 40.0 bits (92), Expect = 0.007
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 32/192 (16%)
Query: 53 ELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKG 112
EL KY + L L E ++L D E I + T KL+ L+ R G
Sbjct: 191 ELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSAKRETSG 250
Query: 113 ------RDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFY 166
RD +A+ K++ Q++ L TK K + E++ E+
Sbjct: 251 EKSRQLRDAQQDARDKMEDIERQVRELK----------TKISAMKEEKEQLSAERQEQIK 300
Query: 167 KEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYL 226
+ +K E+ D + L EQRKRL L ++K+L++IE K++ L
Sbjct: 301 QR-----TKLELKAKDLQDE----LAGNSEQRKRL-------LKERQKLLEKIEEKQKEL 344
Query: 227 SSLQPRLNSIMQ 238
+ +P+ NS+ +
Sbjct: 345 AETEPKFNSVKE 356
>gi|219555718 synaptonemal complex central element protein 1 isoform
4 [Homo sapiens]
Length = 351
Score = 39.3 bits (90), Expect = 0.012
Identities = 45/213 (21%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 60 QELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEA 119
Q+++ LM +Q L+ G + +E+ RI +++ + A+ L + R
Sbjct: 31 QKIEDLMEMVQKLQKVGSLEPRVEVLINRINE------VQQAKKKANKDLGEARTICEAL 84
Query: 120 KQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVT 179
++++D+ H + +L E++ ++E + L + +E + +E IS +
Sbjct: 85 QKELDSLHGEKVHLK-EILSKKQETLRILRLHCQEKESEAHRKHTMLQECKERISALNLQ 143
Query: 180 MGDP-HQQTLARLD---------------WELEQRKRLAEKYRECLSNKEKILKEIEVKK 223
+ + ++Q RL W+ +RLA++ S+KE++LKE ++ K
Sbjct: 144 IEEEKNKQRQLRLAFEEQLEDLMGQHKDLWDFHMPERLAKEICALDSSKEQLLKEEKLVK 203
Query: 224 EYLSSLQPRLNSIMQASLP--VQEYLFMPFDQA 254
L ++ +L S+ A P + E LF+ +A
Sbjct: 204 ATLEDVKHQLCSLCGAEGPSTLDEGLFLRSQEA 236
>gi|219555716 synaptonemal complex central element protein 1 isoform
3 [Homo sapiens]
Length = 318
Score = 39.3 bits (90), Expect = 0.012
Identities = 45/213 (21%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 60 QELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEA 119
Q+++ LM +Q L+ G + +E+ RI +++ + A+ L + R
Sbjct: 31 QKIEDLMEMVQKLQKVGSLEPRVEVLINRINE------VQQAKKKANKDLGEARTICEAL 84
Query: 120 KQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVT 179
++++D+ H + +L E++ ++E + L + +E + +E IS +
Sbjct: 85 QKELDSLHGEKVHLK-EILSKKQETLRILRLHCQEKESEAHRKHTMLQECKERISALNLQ 143
Query: 180 MGDP-HQQTLARLD---------------WELEQRKRLAEKYRECLSNKEKILKEIEVKK 223
+ + ++Q RL W+ +RLA++ S+KE++LKE ++ K
Sbjct: 144 IEEEKNKQRQLRLAFEEQLEDLMGQHKDLWDFHMPERLAKEICALDSSKEQLLKEEKLVK 203
Query: 224 EYLSSLQPRLNSIMQASLP--VQEYLFMPFDQA 254
L ++ +L S+ A P + E LF+ +A
Sbjct: 204 ATLEDVKHQLCSLCGAEGPSTLDEGLFLRSQEA 236
>gi|29171755 PTPRF interacting protein alpha 2 [Homo sapiens]
Length = 1257
Score = 38.5 bits (88), Expect = 0.021
Identities = 47/243 (19%), Positives = 104/243 (42%), Gaps = 39/243 (16%)
Query: 39 EEAEVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTL 98
+EAE +D + E+ ++++ MA+ +D++ R + +R + +H M
Sbjct: 303 QEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERITTLEKRYLSAQRESTSIHDMND 362
Query: 99 KKLNRLAHIR--LKKGRDQTHEAKQKVDAYHLQLQNLLYEV-------MHLQKEITKCLE 149
K N LA+ L++ ++ + +++++ +LQ + + L + I +
Sbjct: 363 KLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTMRKAETLPEVEAELAQRIAALTK 422
Query: 150 FKSKHEEID--LVSLEEFYKEAPPDISKAEVT--MGDPHQQTLA------------RLDW 193
+ +H I+ + LE +E ++ +A M + H + L+ RL
Sbjct: 423 AEERHGNIEERMRHLEGQLEEKNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQL 482
Query: 194 ELEQRKRLAEK--------------YRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQA 239
L++R E+ E L +KE++ +EIE + L L+ R S+++
Sbjct: 483 HLKERMAALEEKNVLIQESETFRKNLEESLHDKERLAEEIEKLRSELDQLKMRTGSLIEP 542
Query: 240 SLP 242
++P
Sbjct: 543 TIP 545
>gi|5453980 DnaJ (Hsp40) homolog, subfamily C, member 3 [Homo
sapiens]
Length = 504
Score = 38.1 bits (87), Expect = 0.027
Identities = 45/219 (20%), Positives = 91/219 (41%), Gaps = 21/219 (9%)
Query: 61 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK 120
E+QRL ++ + G AI ++ ++ CV L++L I+ + R + K
Sbjct: 153 EMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLK 212
Query: 121 -------QKVDAYHLQLQNLLYEVMHLQ---KEITKCLEFKSKHEEI-----DLVSLEEF 165
+A++ ++ L Y++ + E+ +CL+ H+ + L +
Sbjct: 213 AASKLKNDNTEAFY-KISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKL 271
Query: 166 YKEAPPDISKAEVTMGDPHQQTLARLDWEL-EQRKRLAEKYRECLSNKEKILKEIEVKKE 224
+ A I T +++ + + + E R E+ C S EK ++ I V E
Sbjct: 272 IESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSE 331
Query: 225 YLSSLQPRLNSIMQASLPVQEYLFMP-FDQAHKQYETAR 262
L +N++ + + YL +D+A + YETA+
Sbjct: 332 VLQMEPDNVNALKDRA---EAYLIEEMYDEAIQDYETAQ 367
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 38.1 bits (87), Expect = 0.027
Identities = 54/257 (21%), Positives = 115/257 (44%), Gaps = 19/257 (7%)
Query: 10 KPKVIRSDGAPAEGKRNRSDTEQ--------EGKYYS-EEAEVDLRDPGRDYELYKYTCQ 60
K K+ + D + K D EQ EG++ +E ++LR+ + E Q
Sbjct: 2514 KQKLEKKDEEISRLKNQIQDQEQLVSKLSQVEGEHQLWKEQNLELRNLTVELEQKIQVLQ 2573
Query: 61 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSC-----VHFMTLKK--LNRLAHIRLKKGR 113
+ + ++ K++ E+E ++ V+ MT K+ L R H +K
Sbjct: 2574 SKNASLQDTLEVLQSSYKNLENELELTKMDKMSFVEKVNKMTAKETELQREMHEMAQKTA 2633
Query: 114 DQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKC-LEFKSKHEEIDLVSLEEFYKEAP-- 170
+ E + + +LQ LL E+ + ++ + LE + +D + ++ KE
Sbjct: 2634 ELQEELSGEKNRLAGELQLLLEEIKSSKDQLKELTLENSELKKSLDCMHKDQVEKEGKVR 2693
Query: 171 PDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQ 230
+I++ ++ + + ++ A L +Q + + YRE L++KE+ L +++ + L S +
Sbjct: 2694 EEIAEYQLRLHEAEKKHQALLLDTNKQYEVEIQTYREKLTSKEECLSSQKLEIDLLKSSK 2753
Query: 231 PRLNSIMQASLPVQEYL 247
LN+ ++A+ + E L
Sbjct: 2754 EELNNSLKATTQILEEL 2770
Score = 32.3 bits (72), Expect = 1.5
Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 12/147 (8%)
Query: 102 NRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKE-ITKCLEFKSKHEEIDLV 160
N L+ IR +K + + D +Q + L E + K+ + CLE EE+ +V
Sbjct: 1902 NELSRIRSEKASIEHEALYLEADLEVVQTEKLCLEKDNENKQKVIVCLE-----EELSVV 1956
Query: 161 SLEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIE 220
+ E D + T D + + ELE + ECL + E++
Sbjct: 1957 TSERNQLRGELDTMSKKTTALDQLSEKMKEKTQELESHQS------ECLHCIQVAEAEVK 2010
Query: 221 VKKEYLSSLQPRLNSIMQASLPVQEYL 247
K E L +L ++ +++ +QE L
Sbjct: 2011 EKTELLQTLSSDVSELLKDKTHLQEKL 2037
Score = 30.8 bits (68), Expect = 4.3
Identities = 31/162 (19%), Positives = 70/162 (43%), Gaps = 15/162 (9%)
Query: 100 KLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKC----LEFKSKHE 155
K+N L +RL+ + K LQL+ E++ +K + KC + ++++
Sbjct: 293 KINEL-ELRLQGHEKEMKGQVNKFQELQLQLEKAKVELIEKEKVLNKCRDELVRTTAQYD 351
Query: 156 EID--LVSLEEFYKEAPPDIS-------KAEVTMGDPHQQTLARLDWELEQRKRLAEKY- 205
+ +LE+ K+ D+S A ++ ++ EL +++R +
Sbjct: 352 QASTKYTALEQKLKKLTEDLSCQRQNAESARCSLEQKIKEKEKEFQEELSRQQRSFQTLD 411
Query: 206 RECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYL 247
+EC+ K ++ +E++ K + LQ L+ + ++ L
Sbjct: 412 QECIQMKARLTQELQQAKNMHNVLQAELDKLTSVKQQLENNL 453
>gi|56550043 sarcolemma associated protein [Homo sapiens]
Length = 811
Score = 38.1 bits (87), Expect = 0.027
Identities = 47/221 (21%), Positives = 93/221 (42%), Gaps = 21/221 (9%)
Query: 1 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ 60
+S E+ + K +P++ K + T+ ++ E DL +P L K Q
Sbjct: 417 LSKENQTRAKESDFSDTLSPSKEKSSDDTTD------AQMDEQDLNEPLAKVSLLKDDLQ 470
Query: 61 ELQRLMAEIQDLKSRGGKDV-AIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEA 119
Q + Q+++ + + A E+ Q C L + R A+ R+Q E+
Sbjct: 471 GAQSEIEAKQEIQHLRKELIEAQELARTSKQKCFELQALLEEERKAY------RNQVEES 524
Query: 120 KQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVT 179
+++ QLQ L + +L++E K E S +E+ L + +E + +A
Sbjct: 525 TKQIQVLQAQLQRLHIDTENLREE--KDSEITSTRDEL-LSARDEILL-----LHQAAAK 576
Query: 180 MGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIE 220
+ +A L EL++ + E++R+ S EK + ++
Sbjct: 577 VASERDTDIASLQEELKKVRAELERWRKAASEYEKEITSLQ 617
>gi|34878777 ring finger protein 20 [Homo sapiens]
Length = 975
Score = 37.4 bits (85), Expect = 0.046
Identities = 50/234 (21%), Positives = 93/234 (39%), Gaps = 26/234 (11%)
Query: 5 SSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQELQR 64
SS+ K + D + KR+ + E+E + E E R+ E K +E Q+
Sbjct: 544 SSQSSASKASQEDANEIKSKRDEEERERERREKERERE-------REREKEKEREREKQK 596
Query: 65 LMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVD 124
L ++ S K+ + R+ ++ + +K+L I LKK ++ E K +D
Sbjct: 597 LKESEKERDSAKDKEKGKHDDGRKKEAEI----IKQLK----IELKKAQESQKEMKLLLD 648
Query: 125 AYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTMGDPH 184
Y + +V + E K + +L L + K+ K M D
Sbjct: 649 MYRSAPKEQRDKVQLMAAE---------KKSKAELEDLRQRLKDLEDKEKKENKKMAD-- 697
Query: 185 QQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQ 238
+ L ++ EQ + L +K +E +L E++V + +Q + +MQ
Sbjct: 698 EDALRKIRAVEEQIEYLQKKLAMAKQEEEALLSEMDVTGQAFEDMQEQNIRLMQ 751
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 37.0 bits (84), Expect = 0.060
Identities = 56/225 (24%), Positives = 90/225 (40%), Gaps = 38/225 (16%)
Query: 60 QELQRLMAEIQDLKSRG-GKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHE 118
Q+LQR +++ Q+ KS+ GK ++E E M L + RL++ Q E
Sbjct: 1288 QDLQRQLSQNQEEKSKWEGKQNSLESE---------LMELHETMASLQSRLRRAELQRME 1338
Query: 119 AKQKVDAYHLQLQNLLYEVMHLQKEITKC---------LE---------FKSKHEEIDLV 160
A+ + + +NL +V HLQ + + LE K K+EE++
Sbjct: 1339 AQGERELLQAAKENLTAQVEHLQAAVVEARAQASAAGILEEDLRTARSALKLKNEEVE-- 1396
Query: 161 SLEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIE 220
E +A + + +V G Q+ LA L L +R+ E R + E K+ E
Sbjct: 1397 -SERERAQALQEQGELKVAQGKALQENLALLTQTLAEREEEVETLRGQIQELE---KQRE 1452
Query: 221 VKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLP 265
++K L L L Q QE + + K HLP
Sbjct: 1453 MQKAALELLSLDLKKRNQEVDLQQEQI----QELEKCRSVLEHLP 1493
>gi|41872583 Rho-associated, coiled-coil containing protein kinase 2
[Homo sapiens]
Length = 1388
Score = 37.0 bits (84), Expect = 0.060
Identities = 39/166 (23%), Positives = 74/166 (44%), Gaps = 13/166 (7%)
Query: 60 QELQRLMAEIQDLKSRGGKDVAIEIEERRI-QSCVHFMTLKKLNRLAHIRLKKGRDQTHE 118
QE Q+ DLK + + +++ E+++ Q H M +K + L+K + +
Sbjct: 798 QETQKRCLTQNDLKMQTQQVNTLKMSEKQLKQENNHLMEMK-------MNLEKQNAELRK 850
Query: 119 AKQKVDAYHLQLQNLLYEVMHLQKEI-TKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAE 177
+Q D +LQ+ L + T+ E K + EE + E ++ ++
Sbjct: 851 ERQDADGQMKELQDQLEAEQYFSTLYKTQVRELKEECEEKTKLGKE--LQQKKQELQDER 908
Query: 178 VTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKK 223
++ + TL + D E R E+Y + KEKI+KE+E+K+
Sbjct: 909 DSLAAQLEITLTKADSEQLARSIAEEQYSDL--EKEKIMKELEIKE 952
Score = 36.6 bits (83), Expect = 0.079
Identities = 47/258 (18%), Positives = 109/258 (42%), Gaps = 24/258 (9%)
Query: 24 KRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDVAIE 83
++ +S+ E + Y + + L +++ K + ++ I++ KS K++ +
Sbjct: 680 EKEKSNMEIDMTYQLKVIQQSLEQEEAEHKATKARLADKNKIYESIEEAKSEAMKEMEKK 739
Query: 84 I-EERRIQSCVHFMTLKKLNR--LAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEV-MH 139
+ EER ++ V + L+ R L LK+ + + +E ++ D + ++NL ++
Sbjct: 740 LLEERTLKQKVENLLLEAEKRCSLLDCDLKQSQQKINELLKQKDVLNEDVRNLTLKIEQE 799
Query: 140 LQKEITKCLEFKSKHEEIDLVSLEE--------FYKEAPPDISKAEVTMGDPHQQT---L 188
QK + K + ++++ + + E E ++ K + Q +
Sbjct: 800 TQKRCLTQNDLKMQTQQVNTLKMSEKQLKQENNHLMEMKMNLEKQNAELRKERQDADGQM 859
Query: 189 ARLDWELEQRKRLAEKYR--------ECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS 240
L +LE + + Y+ EC K K+ KE++ KK+ L + L + ++ +
Sbjct: 860 KELQDQLEAEQYFSTLYKTQVRELKEEC-EEKTKLGKELQQKKQELQDERDSLAAQLEIT 918
Query: 241 LPVQEYLFMPFDQAHKQY 258
L + + A +QY
Sbjct: 919 LTKADSEQLARSIAEEQY 936
>gi|237858621 polyamine modulated factor 1 binding protein 1 isoform
b [Homo sapiens]
Length = 882
Score = 37.0 bits (84), Expect = 0.060
Identities = 42/197 (21%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 58 TCQELQRLMAEIQDLKSRGGKD----------VAIEIEE--RRIQ-SCVHFMTLKKLNRL 104
T QELQR + +Q S K+ +++E+ E R+++ S L+K
Sbjct: 375 TIQELQRELQMLQKESSMAEKEQTSNRKRVEELSLELSEALRKLENSDKEKRQLQKTVAE 434
Query: 105 AHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEI---DLVS 161
+++ D+ ++ + +L+ L E L ++ + L+ +HE++ +L +
Sbjct: 435 QDMKMNDMLDRIKHQHREQGSIKCKLEEDLQEATKLLEDKREQLKKSKEHEKLMEGELEA 494
Query: 162 LEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEV 221
L + +K+ + + + + ++ A L Q + KY + + KEI +
Sbjct: 495 LRQEFKKKDKTLKENSRKLEEENENLRAELQCCSTQLESSLNKYNTSQQVIQDLNKEIAL 554
Query: 222 KKEYLSSLQPRLNSIMQ 238
+KE L SLQ +L+ +Q
Sbjct: 555 QKESLMSLQAQLDKALQ 571
Score = 30.8 bits (68), Expect = 4.3
Identities = 38/170 (22%), Positives = 79/170 (46%), Gaps = 24/170 (14%)
Query: 60 QELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEA 119
+ LQ+ + + Q+ K++ +++ I EER +KKLN L+K R E+
Sbjct: 615 KSLQQSLTQTQEKKAQLEEEI-IAYEER----------MKKLNT----ELRKLRGFHQES 659
Query: 120 KQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVT 179
+ +V A+ +L+ + +V+ QK+ L+ + EE L EF +E ++ +
Sbjct: 660 ELEVHAFDKKLEEMSCQVLQWQKQHQNDLKMLAAKEE----QLREFQEE----MAALKEN 711
Query: 180 MGDPHQQTLARLDWEL-EQRKRLAEKYRECLSNKEKILKEIEVKKEYLSS 228
+ + ++ W + + RL + ++N E+ K+ +V E L +
Sbjct: 712 LLEDDKEPCCLPQWSVPKDTCRLYRGNDQIMTNLEQWAKQQKVANEKLGN 761
>gi|237858619 polyamine modulated factor 1 binding protein 1 isoform
a [Homo sapiens]
Length = 1007
Score = 37.0 bits (84), Expect = 0.060
Identities = 42/197 (21%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 58 TCQELQRLMAEIQDLKSRGGKD----------VAIEIEE--RRIQ-SCVHFMTLKKLNRL 104
T QELQR + +Q S K+ +++E+ E R+++ S L+K
Sbjct: 520 TIQELQRELQMLQKESSMAEKEQTSNRKRVEELSLELSEALRKLENSDKEKRQLQKTVAE 579
Query: 105 AHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEI---DLVS 161
+++ D+ ++ + +L+ L E L ++ + L+ +HE++ +L +
Sbjct: 580 QDMKMNDMLDRIKHQHREQGSIKCKLEEDLQEATKLLEDKREQLKKSKEHEKLMEGELEA 639
Query: 162 LEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEV 221
L + +K+ + + + + ++ A L Q + KY + + KEI +
Sbjct: 640 LRQEFKKKDKTLKENSRKLEEENENLRAELQCCSTQLESSLNKYNTSQQVIQDLNKEIAL 699
Query: 222 KKEYLSSLQPRLNSIMQ 238
+KE L SLQ +L+ +Q
Sbjct: 700 QKESLMSLQAQLDKALQ 716
Score = 33.5 bits (75), Expect = 0.67
Identities = 42/192 (21%), Positives = 82/192 (42%), Gaps = 37/192 (19%)
Query: 60 QELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEA 119
+ LQ+ + + Q+ K++ +++ I EER +KKLN L+K R E+
Sbjct: 760 KSLQQSLTQTQEKKAQLEEEI-IAYEER----------MKKLNT----ELRKLRGFHQES 804
Query: 120 KQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPP-------- 171
+ +V A+ +L+ + +V+ QK+ L+ + EE L EF +E
Sbjct: 805 ELEVHAFDKKLEEMSCQVLQWQKQHQNDLKMLAAKEE----QLREFQEEMAALKENLLED 860
Query: 172 ----------DISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEV 221
+ K + + Q + L+ +Q+K EK L + K + ++
Sbjct: 861 DKEPCCLPQWSVPKDTCRLYRGNDQIMTNLEQWAKQQKVANEKLGNQLREQVKYIAKLSG 920
Query: 222 KKEYLSSLQPRL 233
+K++L S+ L
Sbjct: 921 EKDHLHSVMVHL 932
>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
Length = 2649
Score = 36.6 bits (83), Expect = 0.079
Identities = 40/171 (23%), Positives = 84/171 (49%), Gaps = 17/171 (9%)
Query: 61 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK 120
EL+R++AE++ KSR +E E +++ K+ + I L+K R ++ EAK
Sbjct: 1142 ELERMVAELKKQKSR------VEEELPKVREAAENELRKQQRNVEDISLQKIRAES-EAK 1194
Query: 121 QKVDAYHLQLQNLLYEVMHLQKEITKC----LEFKSKHEEIDLVSLEEFYKEAPPDISKA 176
Q Y +L+ ++ E ++E+ + +E ++K ++ +L F + +
Sbjct: 1195 Q----YRRELETIVREKEAAERELERVRQLTIEAEAKRAAVE-ENLLNFRNQLEENTFTR 1249
Query: 177 EVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLS 227
++ L+ D E +Q+ +L E+ R N+E++LK I+ ++ L+
Sbjct: 1250 RTLEDHLKRKDLSLNDLE-QQKNKLMEELRRKRDNEEELLKLIKQMEKDLA 1299
Score = 35.4 bits (80), Expect = 0.18
Identities = 62/303 (20%), Positives = 124/303 (40%), Gaps = 39/303 (12%)
Query: 38 SEEAEVDLRDPGRDY---ELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVH 94
+ +AE D+R+ + +L K + +E RL+ + D + + + +E+E + +
Sbjct: 1375 NRKAEQDMRELTYELNALQLEKTSSEEKARLLKDKLDETNNTLRCLKLELERKDQAEKGY 1434
Query: 95 FMTLKKLNRLAHIRLKKGRDQTHEA---KQKVDAYHLQLQNLLYEVMHLQKE---ITKCL 148
L++L R + K + EA K+ Y L+L++L +E LQ+E IT+
Sbjct: 1435 SQQLRELGRQLNQTTGKAEEAMQEASDLKKIKRNYQLELESLNHEKGKLQREVDRITRAH 1494
Query: 149 EFKSKHEEIDLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYREC 208
K+ + + F E + L RL + L E++ +
Sbjct: 1495 AVAEKNIQHLNSQIHSFRDE-----------------KELERLQICQRKSDHLKEQFEK- 1536
Query: 209 LSNKEKILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPL 268
+ E++L+ I+ +KE +Q RLN ++ S E L ++ +Q + + +
Sbjct: 1537 --SHEQLLQNIKAEKENNDKIQ-RLNEELEKSNECAEMLKQKVEELTRQNNETKLMMQRI 1593
Query: 269 YV----LFVQATAYGQACDKTLSVAIEGSVDEAKA----LFKPPEDSQDDESDSDAEEEQ 320
+ ++ Q C+ L + +G D+ ++ L K + QD + EE
Sbjct: 1594 QAESENIVLEKQTIQQRCE-ALKIQADGFKDQLRSTNEHLHKQTKTEQDFQRKIKCLEED 1652
Query: 321 TTK 323
K
Sbjct: 1653 LAK 1655
Score = 33.9 bits (76), Expect = 0.51
Identities = 38/185 (20%), Positives = 83/185 (44%), Gaps = 16/185 (8%)
Query: 58 TCQELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTH 117
T Q+ QR + +++ ++ +++ E +++ Q + KK R + L +++
Sbjct: 1638 TEQDFQRKIKCLEEDLAKS-QNLVSEFKQKCDQQNIIIQNTKKEVRNLNAELNASKEEKR 1696
Query: 118 EAKQKVDAYHLQLQNLLYEVMHLQKEI-TKCLEFKSKHEEIDLV---------SLEEFYK 167
+QKV Q+Q L + +Q E+ K +E + H ++ L S EEF K
Sbjct: 1697 RGEQKVQLQQAQVQELNNRLKKVQDELHLKTIEEQMTHRKMVLFQEESGKFKQSAEEFRK 1756
Query: 168 EAPPDISKAEVTMGDPHQQTLARLDWE--LEQRKRLAEKYRECLSNKEKILKEIEVKKEY 225
+ + +T D + RLD+ ++ R E + C +N +++ ++++ +E
Sbjct: 1757 KMEKLMESKVITEND---ISGIRLDFVSLQQENSRAQENAKLCETNIKELERQLQQYREQ 1813
Query: 226 LSSLQ 230
+ Q
Sbjct: 1814 MQQGQ 1818
Score = 32.3 bits (72), Expect = 1.5
Identities = 31/143 (21%), Positives = 63/143 (44%), Gaps = 10/143 (6%)
Query: 109 LKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHE------EIDLVSL 162
L K ++ E KQK D ++ +QN EV +L E+ E K + E + + L
Sbjct: 1653 LAKSQNLVSEFKQKCDQQNIIIQNTKKEVRNLNAELNASKEEKRRGEQKVQLQQAQVQEL 1712
Query: 163 EEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVK 222
K+ ++ + H++ + E + K+ AE++R+ EK+++ +
Sbjct: 1713 NNRLKKVQDELHLKTIEEQMTHRK-MVLFQEESGKFKQSAEEFRK---KMEKLMESKVIT 1768
Query: 223 KEYLSSLQPRLNSIMQASLPVQE 245
+ +S ++ S+ Q + QE
Sbjct: 1769 ENDISGIRLDFVSLQQENSRAQE 1791
Score = 30.8 bits (68), Expect = 4.3
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 35/222 (15%)
Query: 6 SKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQELQRL 65
+ K K+ + AE K+ +S E+E E AE +LR R+ E LQ++
Sbjct: 1133 NSKLTGKISELERMVAELKKQKSRVEEELPKVREAAENELRKQQRNVEDI-----SLQKI 1187
Query: 66 MAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDA 125
AE + K E+E T+ + A L++ R T EA+ K A
Sbjct: 1188 RAESE------AKQYRRELE-----------TIVREKEAAERELERVRQLTIEAEAKRAA 1230
Query: 126 YHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTMGDPHQ 185
L N + + + LE K +++ L LE+ + ++ + D +
Sbjct: 1231 VEENLLNFRNQ-LEENTFTRRTLEDHLKRKDLSLNDLEQQKNKLMEELRRKR----DNEE 1285
Query: 186 QTL---ARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKE 224
+ L +++ +L +K++AEK L K+KI E+E +++
Sbjct: 1286 ELLKLIKQMEKDLAFQKQVAEKQ---LKEKQKI--ELEARRK 1322
>gi|94680976 coiled-coil domain containing 112 isoform 1 [Homo
sapiens]
Length = 529
Score = 36.6 bits (83), Expect = 0.079
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 14/155 (9%)
Query: 82 IEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQT-------HEAKQKVDAYHLQLQNLL 134
+ +EER+ +S + T K+ R +LK+ D T E QK + Q L
Sbjct: 298 LALEERKKESIQIWKTKKQQKREEIFKLKEKADNTPVLFHNKQEDNQKQKEEQRKKQKLA 357
Query: 135 YEVMHLQKEI---TKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARL 191
E QK I KC + EE + +E ++ + T Q+ RL
Sbjct: 358 VEAWKKQKSIEMSMKCASQLKEEEEKEKKHQKERQRQFKLKLLLESYTQQKKEQEEFLRL 417
Query: 192 DWELEQRKRLAEKYRECLSN----KEKILKEIEVK 222
+ E+ ++ AEK + +E+ L ++E+K
Sbjct: 418 EKEIREKAEKAEKRKNAADEISRFQERDLHKLELK 452
>gi|145580595 coiled-coil domain containing 112 isoform 2 [Homo
sapiens]
Length = 446
Score = 36.6 bits (83), Expect = 0.079
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 14/155 (9%)
Query: 82 IEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQT-------HEAKQKVDAYHLQLQNLL 134
+ +EER+ +S + T K+ R +LK+ D T E QK + Q L
Sbjct: 215 LALEERKKESIQIWKTKKQQKREEIFKLKEKADNTPVLFHNKQEDNQKQKEEQRKKQKLA 274
Query: 135 YEVMHLQKEI---TKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARL 191
E QK I KC + EE + +E ++ + T Q+ RL
Sbjct: 275 VEAWKKQKSIEMSMKCASQLKEEEEKEKKHQKERQRQFKLKLLLESYTQQKKEQEEFLRL 334
Query: 192 DWELEQRKRLAEKYRECLSN----KEKILKEIEVK 222
+ E+ ++ AEK + +E+ L ++E+K
Sbjct: 335 EKEIREKAEKAEKRKNAADEISRFQERDLHKLELK 369
>gi|56961680 coiled-coil domain containing 147 [Homo sapiens]
Length = 872
Score = 36.6 bits (83), Expect = 0.079
Identities = 40/194 (20%), Positives = 90/194 (46%), Gaps = 25/194 (12%)
Query: 32 QEGKYYSEEAEVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRIQS 91
+E K +E A +L +++ Q+ + + + S+ + A+E++ + +
Sbjct: 261 KEQKILNERAAKELEQ----FQMRNAKLQQENEQHSLVCEQLSQENQQKALELKAKEEE- 315
Query: 92 CVHFMTLK--KLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLE 149
VH M L KLN++ ++ K T + K +V+ + L+N +++ L++E+ E
Sbjct: 316 -VHQMRLDIGKLNKIRE-QIHKKLHHTEDQKAEVEQHKETLKN---QIVGLEREV----E 366
Query: 150 FKSKHEEIDLVSLEEFYKEAP---------PDISKAEVTMGDPHQQTLARLDWELEQRKR 200
K E+D +++E +E + ++ + + H+Q L+ E++ K
Sbjct: 367 ASKKQAELDRKAMDELLRERDILNKNMLKAVNATQKQTDLVKLHEQAKRNLEGEIQNYKD 426
Query: 201 LAEKYRECLSNKEK 214
A+K R+ + + EK
Sbjct: 427 EAQKQRKIIFHLEK 440
>gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens]
Length = 898
Score = 36.2 bits (82), Expect = 0.10
Identities = 43/217 (19%), Positives = 82/217 (37%), Gaps = 33/217 (15%)
Query: 29 DTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSR--------GGKDV 80
D+ +E K +E L + + + CQ++ + E +++KS ++
Sbjct: 404 DSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEEIKSNELDAKLRVTKGEL 463
Query: 81 AIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHL 140
+++E+ Q +H +K+L L K+G D+ + KV
Sbjct: 464 EKQMQEKSDQLEMHHAKIKELEDLKR-TFKEGMDELRTLRTKV----------------- 505
Query: 141 QKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKA--EVTMGDPHQQTLARLDWELEQR 198
KCLE + E +L +E +I +V D Q+ L R E+E
Sbjct: 506 -----KCLEDERLRTEDELSKYKEIINRQKAEIQNLLDKVKTADQLQEQLQRGKQEIENL 560
Query: 199 KRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNS 235
K E +++ +K ++ ++ L RL S
Sbjct: 561 KEEVESLNSLINDLQKDIEGSRKRESELLLFTERLTS 597
Score = 30.8 bits (68), Expect = 4.3
Identities = 59/258 (22%), Positives = 112/258 (43%), Gaps = 34/258 (13%)
Query: 4 ESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQELQ 63
E+ K K + A E + R + + K Y E E+ + D +L + T EL+
Sbjct: 408 ETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQESEEIKSNE--LDAKL-RVTKGELE 464
Query: 64 RLMAEIQD-LKSRGGKDVAIEIEERRIQSCV-HFMTLK-KLNRLAHIRLKKGRDQTHEAK 120
+ M E D L+ K +E +R + + TL+ K+ L RL+ D+ + K
Sbjct: 465 KQMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKCLEDERLRT-EDELSKYK 523
Query: 121 QKVDAYHLQLQNLLYEVM---HLQKEITKCL-EFKSKHEEIDLVSLEEFYKEAPPDIS-- 174
+ ++ ++QNLL +V LQ+++ + E ++ EE++ SL + DI
Sbjct: 524 EIINRQKAEIQNLLDKVKTADQLQEQLQRGKQEIENLKEEVE--SLNSLINDLQKDIEGS 581
Query: 175 ---KAEVTM---------------GDPHQQTLARLDWELEQRKRLAEKYRECLSNKE-KI 215
++E+ + + Q ++ Q + E+ ++ N E ++
Sbjct: 582 RKRESELLLFTERLTSKNAQLQSESNSLQSQFDKVSCSESQLQSQCEQMKQTNINLESRL 641
Query: 216 LKEIEVKKEYLSSLQPRL 233
LKE E++KE + +LQ L
Sbjct: 642 LKEEELRKEEVQTLQAEL 659
>gi|210032790 hypothetical protein LOC27146 [Homo sapiens]
Length = 1060
Score = 36.2 bits (82), Expect = 0.10
Identities = 46/225 (20%), Positives = 97/225 (43%), Gaps = 40/225 (17%)
Query: 25 RNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDV---- 80
+ + + E +Y ++ E DLR E K ++ +L+ ++DL + ++
Sbjct: 390 QTKKEASAETEYMKQQYEEDLRKIKHQTEEEKKHLKD--QLVKRLEDLVKKHTVEIKSVR 447
Query: 81 -AIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMH 139
++E E +++Q V +L +R KK + + +++ A +++LQN L EV+
Sbjct: 448 SSVEAERKKLQREVEA-------QLEEVR-KKSEKEIKQLEEEKAALNVKLQNSLLEVLR 499
Query: 140 LQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARLD--WELEQ 197
L++ I + K P ++ +G H L D +L++
Sbjct: 500 LEEFIQQ-------------------NKTRPTGAEESPQELGRQHCSILETQDPCLKLDE 540
Query: 198 RKRLAEKYRECLSNKEKILKEIEVKKEYL----SSLQPRLNSIMQ 238
E+Y++ L+ +E + E + + L S QP L S+++
Sbjct: 541 TSPRGEEYQDKLAAEEGTSSDEEERTKVLLKEGSDPQPPLGSLLK 585
>gi|116686122 kinesin family member 4 [Homo sapiens]
Length = 1232
Score = 35.8 bits (81), Expect = 0.13
Identities = 65/325 (20%), Positives = 132/325 (40%), Gaps = 32/325 (9%)
Query: 22 EGKRNRSDTEQEGKYYSE------EAEVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSR 75
E KR+ +D ++ K ++ E + +P ++ E++ ++E +D ++
Sbjct: 759 EAKRHLNDLLEDRKILAQDVAQLKEKKESGENPPPKLRRRTFSLTEVRGQVSESEDSITK 818
Query: 76 GGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLY 135
+ + E+E R Q + + K L+ + R K+ + + A + L+
Sbjct: 819 QIESLETEMEFRSAQ--IADLQQKLLDAESEDRPKQRWENIATILEAKCALKYLIGELVS 876
Query: 136 EVMHLQKEITKCLEFKSKHEEIDLVSLEE--FYKEAPPDISKAEVTMGDPHQQTLARLDW 193
+ + K + + K+ ++ + EE + E ++ V M HQ+ + L
Sbjct: 877 SKIQVSKLESSLKQSKTSCADMQKMLFEERNHFAEIETELQAELVRMEQQHQEKVLYLLS 936
Query: 194 ELEQRKRLAEKYRECLSNKEKIL--------KEIEVKKEYLSSLQP--RLNSIMQASLPV 243
+L+Q + ++ E +S KE+ L +E+E +E Q R N I++ L +
Sbjct: 937 QLQQSQMAEKQLEESVSEKEQQLLSTLKCQDEELEKMREVCEQNQQLLRENEIIKQKLTL 996
Query: 244 QEYL----FMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACD-KTLSVAIEGSVDEAK 298
+ +P D + ++PP V+ Q+ D + L E SV+E
Sbjct: 997 LQVASRQKHLPKDTLLSPDSSFEYVPPKPKPSRVKEKFLEQSMDIEDLKYCSEHSVNE-- 1054
Query: 299 ALFKPPEDSQDDESDSDAEEEQTTK 323
ED D+ + D EE + TK
Sbjct: 1055 -----HEDGDGDDDEGDDEEWKPTK 1074
>gi|31542634 filamin A interacting protein 1 [Homo sapiens]
Length = 1213
Score = 35.8 bits (81), Expect = 0.13
Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 18/233 (7%)
Query: 27 RSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEE 86
R E GK SEE + + +L K ++ + EI +SR G ++ +
Sbjct: 570 RERDELIGKLKSEEEKSS--ELSCSVDLLKKRLDGIEEVEREITRGRSRKGSELTCPEDN 627
Query: 87 RRIQSCVHFMTLKK-LNRLAHIR--LKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKE 143
+ + + LKK L +L + L K D+ + +QK + L ++ ++ +
Sbjct: 628 KIKELTLEIERLKKRLQQLEVVEGDLMKTEDEYDQLEQKFRTEQDKANFLSQQLEEIKHQ 687
Query: 144 ITKCLEFKSKHEEIDLVSLEEFYK--EAPPDISKAEVT---------MGDPHQQTLARLD 192
I K + L ++ EA KAEV M Q + ++D
Sbjct: 688 IAKNKAIEKGEVVSQEAELRHRFRLEEAKSRDLKAEVQALKEKIHELMNKEDQLSQLQVD 747
Query: 193 WELEQRKRLAEKYRECLSNKE--KILKEIEVKKEYLSSLQPRLNSIMQASLPV 243
+ + Q++ + E+ + +E + KE+E+ K Y +L+P +N +PV
Sbjct: 748 YSVLQQRFMEEENKNKNMGQEVLNLTKELELSKRYSRALRPSVNGRRMVDVPV 800
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,256,880
Number of Sequences: 37866
Number of extensions: 1235726
Number of successful extensions: 5965
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 195
Number of HSP's that attempted gapping in prelim test: 5729
Number of HSP's gapped (non-prelim): 450
length of query: 683
length of database: 18,247,518
effective HSP length: 109
effective length of query: 574
effective length of database: 14,120,124
effective search space: 8104951176
effective search space used: 8104951176
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.