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Search of human proteins with 50659084
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|50659084 suppressor of variegation 4-20 homolog 1 isoform 2
[Homo sapiens]
(393 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|50659084 suppressor of variegation 4-20 homolog 1 isoform 2 [... 812 0.0
gi|50659082 suppressor of variegation 4-20 homolog 1 isoform 1 [... 809 0.0
gi|31543169 suppressor of variegation 4-20 homolog 2 [Homo sapiens] 341 8e-94
gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 46 7e-05
gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 46 7e-05
gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 46 7e-05
gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isofor... 46 7e-05
gi|12232401 SET and MYND domain containing 3 [Homo sapiens] 40 0.003
gi|110349788 absent, small, or homeotic 1-like [Homo sapiens] 40 0.004
gi|27477095 nuclear receptor binding SET domain protein 1 isofor... 39 0.011
gi|19923586 nuclear receptor binding SET domain protein 1 isofor... 39 0.011
gi|188035871 SET and MYND domain containing 2 [Homo sapiens] 38 0.018
gi|197313748 SET domain containing 2 [Homo sapiens] 36 0.069
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 36 0.069
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 35 0.090
gi|13699811 WHSC1L1 protein isoform long [Homo sapiens] 35 0.15
gi|11968023 zinc finger protein 106 homolog [Homo sapiens] 34 0.20
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 33 0.45
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 32 0.76
gi|94680976 coiled-coil domain containing 112 isoform 1 [Homo sa... 31 2.2
gi|145580595 coiled-coil domain containing 112 isoform 2 [Homo s... 31 2.2
gi|156142199 euchromatic histone-lysine N-methyltransferase 2 is... 30 2.9
gi|156142197 euchromatic histone-lysine N-methyltransferase 2 is... 30 2.9
gi|194306650 SET domain and mariner transposase fusion [Homo sap... 30 2.9
gi|38093643 SET and MYND domain containing 1 [Homo sapiens] 30 3.8
gi|226246554 hypothetical protein LOC643677 [Homo sapiens] 29 6.4
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap... 29 6.4
gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sap... 29 6.4
gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sap... 29 6.4
gi|154689858 SMYD family member 5 [Homo sapiens] 29 6.4
>gi|50659084 suppressor of variegation 4-20 homolog 1 isoform 2
[Homo sapiens]
Length = 393
Score = 812 bits (2098), Expect = 0.0
Identities = 393/393 (100%), Positives = 393/393 (100%)
Query: 1 MKWLGESKNMVVNGRRNGGKLSNDHQQNQSKLQHTGKDTLKAGKNAVERRSNRCNGNSGF 60
MKWLGESKNMVVNGRRNGGKLSNDHQQNQSKLQHTGKDTLKAGKNAVERRSNRCNGNSGF
Sbjct: 1 MKWLGESKNMVVNGRRNGGKLSNDHQQNQSKLQHTGKDTLKAGKNAVERRSNRCNGNSGF 60
Query: 61 EGQSRYVPSSGMSAKELCENDDLATSLVLDPYLGFQTHKMNTSAFPSRSSRHFSKSDSFS 120
EGQSRYVPSSGMSAKELCENDDLATSLVLDPYLGFQTHKMNTSAFPSRSSRHFSKSDSFS
Sbjct: 61 EGQSRYVPSSGMSAKELCENDDLATSLVLDPYLGFQTHKMNTSAFPSRSSRHFSKSDSFS 120
Query: 121 HNNPVRFRPIKGRQEELKEVIERFKKDEHLEKAFKCLTSGEWARHYFLNKNKMQEKLFKE 180
HNNPVRFRPIKGRQEELKEVIERFKKDEHLEKAFKCLTSGEWARHYFLNKNKMQEKLFKE
Sbjct: 121 HNNPVRFRPIKGRQEELKEVIERFKKDEHLEKAFKCLTSGEWARHYFLNKNKMQEKLFKE 180
Query: 181 HVFIYLRMFATDSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEEN 240
HVFIYLRMFATDSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEEN
Sbjct: 181 HVFIYLRMFATDSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEEN 240
Query: 241 MLLRHGENDFSVMYSTRKNCAQLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDIEPG 300
MLLRHGENDFSVMYSTRKNCAQLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDIEPG
Sbjct: 241 MLLRHGENDFSVMYSTRKNCAQLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDIEPG 300
Query: 301 EEISCYYGDGFFGENNEFCECYTCERRGTGAFKSRVGLPAPAPVINSKYGLRETDKRLNR 360
EEISCYYGDGFFGENNEFCECYTCERRGTGAFKSRVGLPAPAPVINSKYGLRETDKRLNR
Sbjct: 301 EEISCYYGDGFFGENNEFCECYTCERRGTGAFKSRVGLPAPAPVINSKYGLRETDKRLNR 360
Query: 361 LKKLGDSSKNSDSQSVSSNTDADTTQEKNNASK 393
LKKLGDSSKNSDSQSVSSNTDADTTQEKNNASK
Sbjct: 361 LKKLGDSSKNSDSQSVSSNTDADTTQEKNNASK 393
>gi|50659082 suppressor of variegation 4-20 homolog 1 isoform 1
[Homo sapiens]
Length = 885
Score = 809 bits (2090), Expect = 0.0
Identities = 391/392 (99%), Positives = 392/392 (100%)
Query: 1 MKWLGESKNMVVNGRRNGGKLSNDHQQNQSKLQHTGKDTLKAGKNAVERRSNRCNGNSGF 60
MKWLGESKNMVVNGRRNGGKLSNDHQQNQSKLQHTGKDTLKAGKNAVERRSNRCNGNSGF
Sbjct: 1 MKWLGESKNMVVNGRRNGGKLSNDHQQNQSKLQHTGKDTLKAGKNAVERRSNRCNGNSGF 60
Query: 61 EGQSRYVPSSGMSAKELCENDDLATSLVLDPYLGFQTHKMNTSAFPSRSSRHFSKSDSFS 120
EGQSRYVPSSGMSAKELCENDDLATSLVLDPYLGFQTHKMNTSAFPSRSSRHFSKSDSFS
Sbjct: 61 EGQSRYVPSSGMSAKELCENDDLATSLVLDPYLGFQTHKMNTSAFPSRSSRHFSKSDSFS 120
Query: 121 HNNPVRFRPIKGRQEELKEVIERFKKDEHLEKAFKCLTSGEWARHYFLNKNKMQEKLFKE 180
HNNPVRFRPIKGRQEELKEVIERFKKDEHLEKAFKCLTSGEWARHYFLNKNKMQEKLFKE
Sbjct: 121 HNNPVRFRPIKGRQEELKEVIERFKKDEHLEKAFKCLTSGEWARHYFLNKNKMQEKLFKE 180
Query: 181 HVFIYLRMFATDSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEEN 240
HVFIYLRMFATDSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEEN
Sbjct: 181 HVFIYLRMFATDSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEEN 240
Query: 241 MLLRHGENDFSVMYSTRKNCAQLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDIEPG 300
MLLRHGENDFSVMYSTRKNCAQLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDIEPG
Sbjct: 241 MLLRHGENDFSVMYSTRKNCAQLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDIEPG 300
Query: 301 EEISCYYGDGFFGENNEFCECYTCERRGTGAFKSRVGLPAPAPVINSKYGLRETDKRLNR 360
EEISCYYGDGFFGENNEFCECYTCERRGTGAFKSRVGLPAPAPVINSKYGLRETDKRLNR
Sbjct: 301 EEISCYYGDGFFGENNEFCECYTCERRGTGAFKSRVGLPAPAPVINSKYGLRETDKRLNR 360
Query: 361 LKKLGDSSKNSDSQSVSSNTDADTTQEKNNAS 392
LKKLGDSSKNSDSQSVSSNTDADTTQEKNNA+
Sbjct: 361 LKKLGDSSKNSDSQSVSSNTDADTTQEKNNAT 392
>gi|31543169 suppressor of variegation 4-20 homolog 2 [Homo sapiens]
Length = 462
Score = 341 bits (874), Expect = 8e-94
Identities = 168/289 (58%), Positives = 203/289 (70%), Gaps = 24/289 (8%)
Query: 72 MSAKELCENDDLATSLVLDPYLGFQTHKMNTSAFPSRSSRHFSKSDSFSHNNPVRFRPIK 131
++A+ELCENDDLATSLVLDPYLGF+THKMN S P P+R
Sbjct: 6 VTARELCENDDLATSLVLDPYLGFRTHKMNVSPVP-----------------PLR----- 43
Query: 132 GRQEELKEVIERFKKDEHLEKAFKCLTSGEWARHYFLNKNKMQEKLFKEHVFIYLRMFAT 191
RQ+ L+ +E F + LE A++ LT G W YF ++ QE K HV+ YLR F
Sbjct: 44 -RQQHLRSALETFLRQRDLEAAYRALTLGGWTARYFQSRGPRQEAALKTHVYRYLRAFLP 102
Query: 192 DSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENMLLRHGENDFS 251
+SGF ILPC RYS E NGAKIV+T+ WK+N+K+ELLVGCIAEL E +E LLR GENDFS
Sbjct: 103 ESGFTILPCTRYSMETNGAKIVSTRAWKKNEKLELLVGCIAELREADEG-LLRAGENDFS 161
Query: 252 VMYSTRKNCAQLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDIEPGEEISCYYGDGF 311
+MYSTRK AQLWLGPAAFINHDC+PNCKFV + ACVK LRDIEPG+E++C+YG+GF
Sbjct: 162 IMYSTRKRSAQLWLGPAAFINHDCKPNCKFVPADGNAACVKVLRDIEPGDEVTCFYGEGF 221
Query: 312 FGENNEFCECYTCERRGTGAFKSRVGLPAPAPVINSKYGLRETDKRLNR 360
FGE NE CEC+TCER+G GAF++R PA P KY LRET +RL +
Sbjct: 222 FGEKNEHCECHTCERKGEGAFRTRPREPALPPRPLDKYQLRETKRRLQQ 270
>gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 45.8 bits (107), Expect = 7e-05
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 20/181 (11%)
Query: 205 SEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENML-LRHG-ENDFSVMYS-TRKNCA 261
++ G +VA ++ ++ + + VG EL + EE M ++H END + Y T
Sbjct: 1070 TDGKGWGLVAKRDIRKGEFVNEYVG---ELIDEEECMARIKHAHENDITHFYMLTIDKDR 1126
Query: 262 QLWLGP----AAFINHDCRPNC---KFVSTGRDTACVKALRDIEPGEEISCYYGDGFFGE 314
+ GP + F+NH C+PNC K+ G + A+ DI G E++ Y G
Sbjct: 1127 IIDAGPKGNYSRFMNHSCQPNCETLKWTVNGDTRVGLFAVCDIPAGTELTFNYNLDCLGN 1186
Query: 315 NNEFCECYTCERRGTGAFKSRVG-LPAPAPVINSKYGLRETDKRLNRLKKLGDSSKNSDS 373
C C G +G P + ++S+ ++T K+ R + G+ + S+
Sbjct: 1187 EKTVCRC------GASNCSGFLGDRPKTSTTLSSEEKGKKTKKKTRRRRAKGEGKRQSED 1240
Query: 374 Q 374
+
Sbjct: 1241 E 1241
>gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 45.8 bits (107), Expect = 7e-05
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 20/181 (11%)
Query: 205 SEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENML-LRHG-ENDFSVMYS-TRKNCA 261
++ G +VA ++ ++ + + VG EL + EE M ++H END + Y T
Sbjct: 1070 TDGKGWGLVAKRDIRKGEFVNEYVG---ELIDEEECMARIKHAHENDITHFYMLTIDKDR 1126
Query: 262 QLWLGP----AAFINHDCRPNC---KFVSTGRDTACVKALRDIEPGEEISCYYGDGFFGE 314
+ GP + F+NH C+PNC K+ G + A+ DI G E++ Y G
Sbjct: 1127 IIDAGPKGNYSRFMNHSCQPNCETLKWTVNGDTRVGLFAVCDIPAGTELTFNYNLDCLGN 1186
Query: 315 NNEFCECYTCERRGTGAFKSRVG-LPAPAPVINSKYGLRETDKRLNRLKKLGDSSKNSDS 373
C C G +G P + ++S+ ++T K+ R + G+ + S+
Sbjct: 1187 EKTVCRC------GASNCSGFLGDRPKTSTTLSSEEKGKKTKKKTRRRRAKGEGKRQSED 1240
Query: 374 Q 374
+
Sbjct: 1241 E 1241
>gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 45.8 bits (107), Expect = 7e-05
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 20/181 (11%)
Query: 205 SEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENML-LRHG-ENDFSVMYS-TRKNCA 261
++ G +VA ++ ++ + + VG EL + EE M ++H END + Y T
Sbjct: 1070 TDGKGWGLVAKRDIRKGEFVNEYVG---ELIDEEECMARIKHAHENDITHFYMLTIDKDR 1126
Query: 262 QLWLGP----AAFINHDCRPNC---KFVSTGRDTACVKALRDIEPGEEISCYYGDGFFGE 314
+ GP + F+NH C+PNC K+ G + A+ DI G E++ Y G
Sbjct: 1127 IIDAGPKGNYSRFMNHSCQPNCETLKWTVNGDTRVGLFAVCDIPAGTELTFNYNLDCLGN 1186
Query: 315 NNEFCECYTCERRGTGAFKSRVG-LPAPAPVINSKYGLRETDKRLNRLKKLGDSSKNSDS 373
C C G +G P + ++S+ ++T K+ R + G+ + S+
Sbjct: 1187 EKTVCRC------GASNCSGFLGDRPKTSTTLSSEEKGKKTKKKTRRRRAKGEGKRQSED 1240
Query: 374 Q 374
+
Sbjct: 1241 E 1241
>gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 45.8 bits (107), Expect = 7e-05
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 20/181 (11%)
Query: 205 SEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENML-LRHG-ENDFSVMYS-TRKNCA 261
++ G +VA ++ ++ + + VG EL + EE M ++H END + Y T
Sbjct: 1070 TDGKGWGLVAKRDIRKGEFVNEYVG---ELIDEEECMARIKHAHENDITHFYMLTIDKDR 1126
Query: 262 QLWLGP----AAFINHDCRPNC---KFVSTGRDTACVKALRDIEPGEEISCYYGDGFFGE 314
+ GP + F+NH C+PNC K+ G + A+ DI G E++ Y G
Sbjct: 1127 IIDAGPKGNYSRFMNHSCQPNCETLKWTVNGDTRVGLFAVCDIPAGTELTFNYNLDCLGN 1186
Query: 315 NNEFCECYTCERRGTGAFKSRVG-LPAPAPVINSKYGLRETDKRLNRLKKLGDSSKNSDS 373
C C G +G P + ++S+ ++T K+ R + G+ + S+
Sbjct: 1187 EKTVCRC------GASNCSGFLGDRPKTSTTLSSEEKGKKTKKKTRRRRAKGEGKRQSED 1240
Query: 374 Q 374
+
Sbjct: 1241 E 1241
>gi|12232401 SET and MYND domain containing 3 [Homo sapiens]
Length = 369
Score = 40.4 bits (93), Expect = 0.003
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Query: 269 AFINHDCRPNCKFVSTGRDTACVKALRDIEPGEEISCYYGDGFFGENNE----------F 318
+ +NH C PNC V G ++A+RDIE GEE++ Y D
Sbjct: 143 SLLNHSCDPNCSIVFNG-PHLLLRAVRDIEVGEELTICYLDMLMTSEERRKQLRDQYCFE 201
Query: 319 CECYTCERRGTGA 331
C+C+ C+ + A
Sbjct: 202 CDCFRCQTQDKDA 214
>gi|110349788 absent, small, or homeotic 1-like [Homo sapiens]
Length = 2964
Score = 40.0 bits (92), Expect = 0.004
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 268 AAFINHDCRPNC---KFVSTGRDTACVKALRDIEPGEEISCYYG-DGFFGENNEFCECYT 323
A FINH C PNC K+ G + AL+D+ G E++ Y F E + C+C
Sbjct: 2213 ARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGF 2272
Query: 324 CERRG-TGAFKSRV-GLPA---PAPVINSKYGLRETDKRLNRLKKLGDSSKNSDSQSVSS 378
+ RG G RV GL + P+ K R +KR ++ K S+ S +
Sbjct: 2273 EKCRGIIGGKSQRVNGLTSSKNSQPMATHKKSGRSKEKRKSKHKLKKRRGHLSEEPSENI 2332
Query: 379 NTDADTTQE 387
NT T +
Sbjct: 2333 NTPTRLTPQ 2341
>gi|27477095 nuclear receptor binding SET domain protein 1 isoform a
[Homo sapiens]
Length = 2427
Score = 38.5 bits (88), Expect = 0.011
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 10/114 (8%)
Query: 268 AAFINHDCRPNC---KFVSTGRDTACVKALRDIEPGEEISCYYGDGFFGENNEFCECYTC 324
A F+NH C+PNC K+ G + AL DI+ G E++ Y G C+C
Sbjct: 1747 ARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKC--- 1803
Query: 325 ERRGTGAFKSRVGL-PAPAPVINSKYGLRETDKRLNRLKKLGDSSKNSDSQSVS 377
G +G+ P P+ + + K+ + + G+ +K + + S
Sbjct: 1804 ---GAPNCSGFLGVRPKNQPIATEEKSKKFKKKQQGKRRTQGEITKEREDECFS 1854
>gi|19923586 nuclear receptor binding SET domain protein 1 isoform b
[Homo sapiens]
Length = 2696
Score = 38.5 bits (88), Expect = 0.011
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 10/114 (8%)
Query: 268 AAFINHDCRPNC---KFVSTGRDTACVKALRDIEPGEEISCYYGDGFFGENNEFCECYTC 324
A F+NH C+PNC K+ G + AL DI+ G E++ Y G C+C
Sbjct: 2016 ARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKC--- 2072
Query: 325 ERRGTGAFKSRVGL-PAPAPVINSKYGLRETDKRLNRLKKLGDSSKNSDSQSVS 377
G +G+ P P+ + + K+ + + G+ +K + + S
Sbjct: 2073 ---GAPNCSGFLGVRPKNQPIATEEKSKKFKKKQQGKRRTQGEITKEREDECFS 2123
>gi|188035871 SET and MYND domain containing 2 [Homo sapiens]
Length = 433
Score = 37.7 bits (86), Expect = 0.018
Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 31/143 (21%)
Query: 211 KIVATKEWKR------NDKIELLVGCIAELSEIEENMLLRHGENDFSVMYSTRKNCAQLW 264
K++A KE++ N+K +L+ IA L L +ND V+ + NC
Sbjct: 127 KLLAVKEFESHLDKLDNEKKDLIQSDIAALHHFYSKHL-GFPDNDSLVVLFAQVNCNGFT 185
Query: 265 --------LGPAAF-----INHDCRPNCKFVSTGRDTACVKALRDIEPGEEISCYYGDGF 311
LG A F +NH C PN G A V+A+++I+PGEE+ Y D
Sbjct: 186 IEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGT-LAEVRAVQEIKPGEEVFTSYIDLL 244
Query: 312 FGENNE----------FCECYTC 324
+ + CEC C
Sbjct: 245 YPTEDRNDRLRDSYFFTCECQEC 267
>gi|197313748 SET domain containing 2 [Homo sapiens]
Length = 2564
Score = 35.8 bits (81), Expect = 0.069
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 14/131 (10%)
Query: 247 ENDFSVMYSTRKNCAQLWLGPAAFINHDCRPNC---KFVSTGRDTACVKALRDIEPGEEI 303
+ND + + + NC++ F+NH C PNC K+ G+ + + G E+
Sbjct: 1610 KNDEIIDATQKGNCSR-------FMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSEL 1662
Query: 304 SCYYGDGFFGENNEFCECYTCERRGTGAFKSRVGLPAPAPVINSKYGLRE--TDKRLNRL 361
+ Y +G+ + C C + RG ++RV + A + + ++ D L L
Sbjct: 1663 TFDYQFQRYGKEAQKCFCGSANCRGYLGGENRVSIRAAGGKMKKERSRKKDSVDGELEAL 1722
Query: 362 KKLGD--SSKN 370
+ G+ S KN
Sbjct: 1723 MENGEGLSDKN 1733
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 35.8 bits (81), Expect = 0.069
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 261 AQLWLGPAAFINHDCRPNC--KFVSTGR-DTACVKALRDIEPGEEISCYYGDGFFGENNE 317
A L GPA +INH C PNC + V+ + D + + R I GEE++ Y F + ++
Sbjct: 5463 ATLTGGPARYINHSCAPNCVAEVVTFDKEDKIIIISSRRIPKGEELTYDYQFDFEDDQHK 5522
Query: 318 F-CEC 321
C C
Sbjct: 5523 IPCHC 5527
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 35.4 bits (80), Expect = 0.090
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 261 AQLWLGPAAFINHDCRPNC--KFVSTGR-DTACVKALRDIEPGEEISCYYGDGFFGENNE 317
A L GPA +INH C PNC + V+ R + + R I+ GEE+ Y F + ++
Sbjct: 4837 ATLTGGPARYINHSCAPNCVAEVVTFERGHKIIISSSRRIQKGEELCYDYKFDFEDDQHK 4896
Query: 318 F-CEC 321
C C
Sbjct: 4897 IPCHC 4901
>gi|13699811 WHSC1L1 protein isoform long [Homo sapiens]
Length = 1437
Score = 34.7 bits (78), Expect = 0.15
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 270 FINHDCRPNC---KFVSTGRDTACVKALRDIEPGEEISCYYGDGFFGENNEFCEC 321
F+NH C PNC K+ G + AL DI G E++ Y G C C
Sbjct: 1221 FMNHSCNPNCETQKWTVNGDVRVGLFALCDIPAGMELTFNYNLDCLGNGRTECHC 1275
>gi|11968023 zinc finger protein 106 homolog [Homo sapiens]
Length = 1883
Score = 34.3 bits (77), Expect = 0.20
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 5 GESKNMVVNGRRNGGKLSNDHQQNQSKLQHTGKDTLKAGKNAVERRSNRCNGNSGFEGQS 64
GE V RR+ +LS+DH L H KD L + + ++ N+ + S EG
Sbjct: 924 GERAENVATQRRHSAQLSSDH---IIPLMHLAKD-LNSQERSIPPSENQNSQESNGEGNC 979
Query: 65 RYVPSSGMSAKELCENDDLATSLVLDPYLGFQTHKMNTSAFPSRSSRHFSKSDSFSHNNP 124
+ SS SA + D AT G + + + R++ S + S
Sbjct: 980 --LSSSASSALAISSLADAATDSSCTS--GAEQNDGQSIRKKRRATGDGSSPELPSLERK 1035
Query: 125 VRFRPIKGRQE--ELKEVIERFKKDEHLEKAFKCL 157
+ R IKG++E ++ +++ ++E L K+ +C+
Sbjct: 1036 NKRRKIKGKKERSQVDQLLNISLREEELSKSLQCM 1070
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 33.1 bits (74), Expect = 0.45
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 248 NDFSVMYSTRKNCAQLWLGPAAFINHDCRPNC---KFVSTGRDTACVKALRDIEPGEEIS 304
+DF V+ +T A A FINH C PNC G+ + ALR I GEE++
Sbjct: 2634 DDFDVVDATMHGNA------ARFINHSCEPNCFSRVIHVEGQKHIVIFALRRILRGEELT 2687
Query: 305 CYYGDGFFGENNEF-CEC 321
Y +N+ C C
Sbjct: 2688 YDYKFPIEDASNKLPCNC 2705
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 32.3 bits (72), Expect = 0.76
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 268 AAFINHDCRPNC--KFVS-TGRDTACVKALRDIEPGEEISCYYGDGFFGENNEF-CEC 321
A FINH C PNC + ++ G+ + A+R I GEE++ Y +N+ C C
Sbjct: 3902 ARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIEDASNKLPCNC 3959
>gi|94680976 coiled-coil domain containing 112 isoform 1 [Homo
sapiens]
Length = 529
Score = 30.8 bits (68), Expect = 2.2
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 117 DSFSHNNPVRFR-PIKGRQEELKEVIERFK---KDE--HLEKAFKCLTSGEWARHYFLNK 170
D + H N V+ R KG+ ++EV+E +DE EK ++ + E + +
Sbjct: 251 DDYDHQNFVKVRNKHKGKPTFMEEVLEHLPGKTQDEVQQHEKWYQKFLALEERKKESIQI 310
Query: 171 NKMQEKLFKEHVFIYLRMFATDSGFEILPCNRYSS------EQNGAKIVATKEWKRNDKI 224
K +++ +E +F ++ +L N+ EQ + +A + WK+ I
Sbjct: 311 WKTKKQQKREEIF---KLKEKADNTPVLFHNKQEDNQKQKEEQRKKQKLAVEAWKKQKSI 367
Query: 225 ELLVGCIAELSEIEE 239
E+ + C ++L E EE
Sbjct: 368 EMSMKCASQLKEEEE 382
>gi|145580595 coiled-coil domain containing 112 isoform 2 [Homo
sapiens]
Length = 446
Score = 30.8 bits (68), Expect = 2.2
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 117 DSFSHNNPVRFR-PIKGRQEELKEVIERFK---KDE--HLEKAFKCLTSGEWARHYFLNK 170
D + H N V+ R KG+ ++EV+E +DE EK ++ + E + +
Sbjct: 168 DDYDHQNFVKVRNKHKGKPTFMEEVLEHLPGKTQDEVQQHEKWYQKFLALEERKKESIQI 227
Query: 171 NKMQEKLFKEHVFIYLRMFATDSGFEILPCNRYSS------EQNGAKIVATKEWKRNDKI 224
K +++ +E +F ++ +L N+ EQ + +A + WK+ I
Sbjct: 228 WKTKKQQKREEIF---KLKEKADNTPVLFHNKQEDNQKQKEEQRKKQKLAVEAWKKQKSI 284
Query: 225 ELLVGCIAELSEIEE 239
E+ + C ++L E EE
Sbjct: 285 EMSMKCASQLKEEEE 299
>gi|156142199 euchromatic histone-lysine N-methyltransferase 2 isoform
b [Homo sapiens]
Length = 1176
Score = 30.4 bits (67), Expect = 2.9
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
Query: 270 FINHDCRPNC---KFVSTGRDTACVK----ALRDIEPGEEISCYYGDGFFGENNEF--CE 320
FINH C PN + +D + + RDI GEE+ YGD F+ +++ C+
Sbjct: 1076 FINHLCDPNIIPVRVFMLHQDLRFPRIAFFSSRDIRTGEELGFDYGDRFWDIKSKYFTCQ 1135
Query: 321 C 321
C
Sbjct: 1136 C 1136
>gi|156142197 euchromatic histone-lysine N-methyltransferase 2 isoform
a [Homo sapiens]
Length = 1210
Score = 30.4 bits (67), Expect = 2.9
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
Query: 270 FINHDCRPNC---KFVSTGRDTACVK----ALRDIEPGEEISCYYGDGFFGENNEF--CE 320
FINH C PN + +D + + RDI GEE+ YGD F+ +++ C+
Sbjct: 1110 FINHLCDPNIIPVRVFMLHQDLRFPRIAFFSSRDIRTGEELGFDYGDRFWDIKSKYFTCQ 1169
Query: 321 C 321
C
Sbjct: 1170 C 1170
>gi|194306650 SET domain and mariner transposase fusion [Homo
sapiens]
Length = 684
Score = 30.4 bits (67), Expect = 2.9
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 270 FINHDCRPNCKFVSTGRDTACVK----ALRDIEPGEEISCYY 307
F+NH C PN + D+ K A +DI P EE+S Y
Sbjct: 221 FLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDY 262
>gi|38093643 SET and MYND domain containing 1 [Homo sapiens]
Length = 490
Score = 30.0 bits (66), Expect = 3.8
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 24/80 (30%)
Query: 271 INHDCRPNCKFVSTGRDTACVK------------ALRDIEPGEEISCYYGDGFFGENNE- 317
+NHDC PNC + + VK AL I GEE++ Y D F + E
Sbjct: 204 VNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYID-FLNVSEER 262
Query: 318 ----------FCECYTCERR 327
C C C+++
Sbjct: 263 KRQLKKQYYFDCTCEHCQKK 282
>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
Length = 7081
Score = 29.3 bits (64), Expect = 6.4
Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 11/187 (5%)
Query: 30 SKLQHTGKDTLKAGKNAVERRSN---RCNGNSGFEGQSRYVPSSGMSAKE-LCENDDL-A 84
S L HT +++ + R S+ + ++ +G + SG +E L E D A
Sbjct: 2469 SGLSHTQPTQIESLAEGIARYSDPIDKRRTSNLVKGAKLHDRESGEEKQEHLTEMDPFYA 2528
Query: 85 TSLVLDPYLGFQTHKMNTSAFPSRSSRHFSKSDSFSHNNP--VRFRPIKGRQEELKEVIE 142
+ + + YL H + S FSKS + N+ V+ K +E LK +
Sbjct: 2529 ENFMANTYLRKDRH-LGKSEDVLLGETFFSKSQIYKGNSEKNVKIEKNKNGKESLKVGLA 2587
Query: 143 RFKKDEHLEKAFKCLTSGEWARHYFLNKNKMQEKLFKEHVFIYLRMFATDSGFEILPCNR 202
R +K ++ + + T + Y +K + + KE+ F L DS P +
Sbjct: 2588 RMEKSDNCAELSEA-TDDAISNKY--DKQNIGHSVLKENAFCNLAAIVPDSVGRHSPASE 2644
Query: 203 YSSEQNG 209
QNG
Sbjct: 2645 EMKRQNG 2651
>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 29.3 bits (64), Expect = 6.4
Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 11/187 (5%)
Query: 30 SKLQHTGKDTLKAGKNAVERRSN---RCNGNSGFEGQSRYVPSSGMSAKE-LCENDDL-A 84
S L HT +++ + R S+ + ++ +G + SG +E L E D A
Sbjct: 2398 SGLSHTQPTQIESLAEGIARYSDPIDKRRTSNLVKGAKLHDRESGEEKQEHLTEMDPFYA 2457
Query: 85 TSLVLDPYLGFQTHKMNTSAFPSRSSRHFSKSDSFSHNNP--VRFRPIKGRQEELKEVIE 142
+ + + YL H + S FSKS + N+ V+ K +E LK +
Sbjct: 2458 ENFMANTYLRKDRH-LGKSEDVLLGETFFSKSQIYKGNSEKNVKIEKNKNGKESLKVGLA 2516
Query: 143 RFKKDEHLEKAFKCLTSGEWARHYFLNKNKMQEKLFKEHVFIYLRMFATDSGFEILPCNR 202
R +K ++ + + T + Y +K + + KE+ F L DS P +
Sbjct: 2517 RMEKSDNCAELSEA-TDDAISNKY--DKQNIGHSVLKENAFCNLAAIVPDSVGRHSPASE 2573
Query: 203 YSSEQNG 209
QNG
Sbjct: 2574 EMKRQNG 2580
>gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 29.3 bits (64), Expect = 6.4
Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 11/187 (5%)
Query: 30 SKLQHTGKDTLKAGKNAVERRSN---RCNGNSGFEGQSRYVPSSGMSAKE-LCENDDL-A 84
S L HT +++ + R S+ + ++ +G + SG +E L E D A
Sbjct: 2398 SGLSHTQPTQIESLAEGIARYSDPIDKRRTSNLVKGAKLHDRESGEEKQEHLTEMDPFYA 2457
Query: 85 TSLVLDPYLGFQTHKMNTSAFPSRSSRHFSKSDSFSHNNP--VRFRPIKGRQEELKEVIE 142
+ + + YL H + S FSKS + N+ V+ K +E LK +
Sbjct: 2458 ENFMANTYLRKDRH-LGKSEDVLLGETFFSKSQIYKGNSEKNVKIEKNKNGKESLKVGLA 2516
Query: 143 RFKKDEHLEKAFKCLTSGEWARHYFLNKNKMQEKLFKEHVFIYLRMFATDSGFEILPCNR 202
R +K ++ + + T + Y +K + + KE+ F L DS P +
Sbjct: 2517 RMEKSDNCAELSEA-TDDAISNKY--DKQNIGHSVLKENAFCNLAAIVPDSVGRHSPASE 2573
Query: 203 YSSEQNG 209
QNG
Sbjct: 2574 EMKRQNG 2580
>gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 29.3 bits (64), Expect = 6.4
Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 11/187 (5%)
Query: 30 SKLQHTGKDTLKAGKNAVERRSN---RCNGNSGFEGQSRYVPSSGMSAKE-LCENDDL-A 84
S L HT +++ + R S+ + ++ +G + SG +E L E D A
Sbjct: 2398 SGLSHTQPTQIESLAEGIARYSDPIDKRRTSNLVKGAKLHDRESGEEKQEHLTEMDPFYA 2457
Query: 85 TSLVLDPYLGFQTHKMNTSAFPSRSSRHFSKSDSFSHNNP--VRFRPIKGRQEELKEVIE 142
+ + + YL H + S FSKS + N+ V+ K +E LK +
Sbjct: 2458 ENFMANTYLRKDRH-LGKSEDVLLGETFFSKSQIYKGNSEKNVKIEKNKNGKESLKVGLA 2516
Query: 143 RFKKDEHLEKAFKCLTSGEWARHYFLNKNKMQEKLFKEHVFIYLRMFATDSGFEILPCNR 202
R +K ++ + + T + Y +K + + KE+ F L DS P +
Sbjct: 2517 RMEKSDNCAELSEA-TDDAISNKY--DKQNIGHSVLKENAFCNLAAIVPDSVGRHSPASE 2573
Query: 203 YSSEQNG 209
QNG
Sbjct: 2574 EMKRQNG 2580
>gi|154689858 SMYD family member 5 [Homo sapiens]
Length = 418
Score = 29.3 bits (64), Expect = 6.4
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 272 NHDCRPNCKFVSTGRDTAC-VKALRDIEPGEEISCYYGD 309
NH C PN + + V AL DI+PGEEI Y D
Sbjct: 315 NHSCVPNAETSFPENNFLLHVTALEDIKPGEEICISYLD 353
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,344,105
Number of Sequences: 37866
Number of extensions: 703519
Number of successful extensions: 2237
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 2210
Number of HSP's gapped (non-prelim): 47
length of query: 393
length of database: 18,247,518
effective HSP length: 104
effective length of query: 289
effective length of database: 14,309,454
effective search space: 4135432206
effective search space used: 4135432206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.