SETMAR 11032

Name: SETMAR	Sequence: fasta or formatted (684aa)		NCBI GI: 194306650
Description: SET domain and mariner transposase fusion		Referenced in: Histones, Related Proteins, and Modifying Enzymes DNA Transposon and Retrovirus-related Sequences
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 39 2 C cysteine 3.7 25 1 D aspartate 5.0 34 2 E glutamate 7.7 53 3 F phenylalanine 5.0 34 1 G glycine 5.7 39 2 H histidine 3.2 22 1 I isoleucine 4.7 32 2 K lysine 6.7 46 2 L leucine 8.3 57 2 M methionine 1.8 12 2 N asparagine 5.4 37 2 P proline 6.6 45 2 Q glutamine 4.4 30 2 R arginine 5.6 38 3 S serine 5.4 37 3 T threonine 5.0 34 3 V valine 5.8 40 2 W tryptophan 1.5 10 2 Y tyrosine 2.9 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SET domain and mariner transposase fusion EHMT1 0.082 euchromatic histone-lysine N-methyltransferase 1 is... SUV39H1 0.081 suppressor of variegation 3-9 homolog 1 EHMT2 0.081 euchromatic histone-lysine N-methyltransferase 2 is... EHMT2 0.081 euchromatic histone-lysine N-methyltransferase 2 is... SUV39H2 0.074 suppressor of variegation 3-9 homolog 2 SETD2 0.053 SET domain containing 2 WHSC1L1 0.047 WHSC1L1 protein isoform long ASH1L 0.045 absent, small, or homeotic 1-like NSD1 0.043 nuclear receptor binding SET domain protein 1 isofor... NSD1 0.043 nuclear receptor binding SET domain protein 1 isofor... SETDB1 0.042 SET domain, bifurcated 1 isoform 2 SETDB1 0.042 SET domain, bifurcated 1 isoform 1 WHSC1 0.041 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.041 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.041 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.041 Wolf-Hirschhorn syndrome candidate 1 protein isofor... EZH1 0.040 enhancer of zeste homolog 1 SETDB2 0.035 SET domain, bifurcated 2 isoform b SETDB2 0.035 SET domain, bifurcated 2 isoform a EZH2 0.034 enhancer of zeste 2 isoform b EZH2 0.034 enhancer of zeste 2 isoform a MLL 0.034 myeloid/lymphoid or mixed-lineage leukemia protein [... SETD1A 0.031 SET domain containing 1A SETD1B 0.029 SET domain containing 1B MLL4 0.028 myeloid/lymphoid or mixed-lineage leukemia 4 MLL2 0.023 myeloid/lymphoid or mixed-lineage leukemia 2 MLL3 0.020 myeloid/lymphoid or mixed-lineage leukemia 3 SETD8 0.018 SET domain-containing 8 SETD5 0.013 SET domain containing 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.