Guide to the Human Genome
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Name: SUV420H2 Sequence: fasta or formatted (462aa) NCBI GI: 31543169
Description:

suppressor of variegation 4-20 homolog 2

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         44           2
 C cysteine            3.5         16           1
 D aspartate           4.1         19           2
 E glutamate           5.6         26           2
 F phenylalanine       3.2         15           2
 G glycine             7.1         33           2
 H histidine           3.0         14           2
 I isoleucine          1.9          9           1
 K lysine              3.7         17           2
 L leucine            11.3         52           2
 M methionine          0.9          4           1
 N asparagine          1.9          9           1
 P proline            10.4         48           2
 Q glutamine           3.9         18           2
 R arginine           12.1         56           3
 S serine              4.3         20           1
 T threonine           4.3         20           1
 V valine              4.8         22           2
 W tryptophan          1.9          9           1
 Y tyrosine            2.4         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   suppressor of variegation 4-20 homolog 2 
SUV420H1              0.333   suppressor of variegation 4-20 homolog 1 isoform 2 [...
SUV420H1              0.333   suppressor of variegation 4-20 homolog 1 isoform 1 [...
WHSC1                 0.020   Wolf-Hirschhorn syndrome candidate 1 protein isoform...
WHSC1                 0.020   Wolf-Hirschhorn syndrome candidate 1 protein isoform...
WHSC1                 0.020   Wolf-Hirschhorn syndrome candidate 1 protein isoform...
WHSC1                 0.020   Wolf-Hirschhorn syndrome candidate 1 protein isofor...
NSD1                  0.018   nuclear receptor binding SET domain protein 1 isofor...
NSD1                  0.018   nuclear receptor binding SET domain protein 1 isofor...
WHSC1L1               0.017   WHSC1L1 protein isoform long 
CLIP3                 0.017   CAP-GLY domain containing linker protein 3 
FLJ22184              0.016   PREDICTED: hypothetical protein FLJ22184 
SMYD2                 0.016   SET and MYND domain containing 2 
SMYD3                 0.015   SET and MYND domain containing 3 
PWWP2B                0.014   PWWP domain containing 2 isoform 1 
PWWP2B                0.014   PWWP domain containing 2 isoform 2 
KPRP                  0.013   keratinocyte proline-rich protein 
IGSF9B                0.013   immunoglobulin superfamily, member 9B 
FLJ22184              0.013   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.013   PREDICTED: hypothetical protein LOC80164 
ASH1L                 0.013   absent, small, or homeotic 1-like 
SMYD1                 0.013   SET and MYND domain containing 1 
CDKN1C                0.012   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.012   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.012   cyclin-dependent kinase inhibitor 1C isoform a 
MLL2                  0.012   myeloid/lymphoid or mixed-lineage leukemia 2 
MLL3                  0.012   myeloid/lymphoid or mixed-lineage leukemia 3 
ESX1                  0.012   extraembryonic, spermatogenesis, homeobox 1-like [Ho...
FAM148B               0.012   nuclear localized factor 2 
FAM148A               0.012   nuclear localized factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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